Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075560 | XP_013468530.1 | 97.863 | 234 | 5 | 0 | 1 | 234 | 1 | 234 | 7.68e-172 | 482 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075560 | sp|Q9M2J7|LBD29_ARATH | 51.570 | 223 | 88 | 4 | 12 | 233 | 11 | 214 | 6.56e-68 | 211 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075560 | A0A072VL56 | 97.863 | 234 | 5 | 0 | 1 | 234 | 1 | 234 | 3.67e-172 | 482 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0075560 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0075560 | 0.817595 | 3.040160e-52 | -8.615850e-47 |
| Msa0014590 | Msa0075560 | 0.802681 | 4.997760e-49 | -8.615850e-47 |
| Msa0027860 | Msa0075560 | 0.940103 | 4.130700e-100 | -8.615850e-47 |
| Msa0048950 | Msa0075560 | 0.808051 | 3.745457e-50 | -8.615850e-47 |
| Msa0059880 | Msa0075560 | 0.843312 | 1.513949e-58 | -8.615850e-47 |
| Msa0072030 | Msa0075560 | 0.806150 | 9.461411e-50 | -8.615850e-47 |
| Msa0074620 | Msa0075560 | 0.814319 | 1.636800e-51 | -8.615850e-47 |
| Msa0075560 | Msa0120050 | 0.820956 | 5.215664e-53 | -8.615850e-47 |
| Msa0075560 | Msa0123530 | 0.911519 | 5.550235e-83 | -8.615850e-47 |
| Msa0075560 | Msa0140270 | 0.821046 | 4.972715e-53 | -8.615850e-47 |
| Msa0075560 | Msa0150910 | 0.838103 | 3.508034e-57 | -8.615850e-47 |
| Msa0075560 | Msa0150920 | 0.828104 | 1.082235e-54 | -8.615850e-47 |
| Msa0075560 | Msa0160580 | 0.811774 | 5.916819e-51 | -8.615850e-47 |
| Msa0075560 | Msa0163340 | 0.842526 | 2.451249e-58 | -8.615850e-47 |
| Msa0075560 | Msa0168010 | 0.916586 | 1.490538e-85 | -8.615850e-47 |
| Msa0075560 | Msa0170990 | 0.804018 | 2.641773e-49 | -8.615850e-47 |
| Msa0075560 | Msa0190670 | 0.827703 | 1.350998e-54 | -8.615850e-47 |
| Msa0075560 | Msa0190890 | 0.800407 | 1.462343e-48 | -8.615850e-47 |
| Msa0075560 | Msa0207640 | 0.808713 | 2.704858e-50 | -8.615850e-47 |
| Msa0075560 | Msa0209060 | 0.821214 | 4.548729e-53 | -8.615850e-47 |
| Msa0075560 | Msa0212550 | 0.809760 | 1.613910e-50 | -8.615850e-47 |
| Msa0075560 | Msa0242830 | 0.801388 | 9.218986e-49 | -8.615850e-47 |
| Msa0075560 | Msa0252930 | 0.800177 | 1.628696e-48 | -8.615850e-47 |
| Msa0075560 | Msa0272210 | 0.833201 | 6.110182e-56 | -8.615850e-47 |
| Msa0075560 | Msa0272230 | 0.807433 | 5.067504e-50 | -8.615850e-47 |
| Msa0075560 | Msa0274250 | 0.808975 | 2.378229e-50 | -8.615850e-47 |
| Msa0075560 | Msa0274260 | 0.809654 | 1.700731e-50 | -8.615850e-47 |
| Msa0075560 | Msa0278460 | 0.815443 | 9.222149e-52 | -8.615850e-47 |
| Msa0075560 | Msa0278950 | 0.803084 | 4.126024e-49 | -8.615850e-47 |
| Msa0075560 | Msa0281190 | 0.834517 | 2.863450e-56 | -8.615850e-47 |
| Msa0075560 | Msa0287720 | 0.801520 | 8.660390e-49 | -8.615850e-47 |
| Msa0075560 | Msa0288540 | 0.821917 | 3.129355e-53 | -8.615850e-47 |
| Msa0075560 | Msa0326770 | 0.815776 | 7.775323e-52 | -8.615850e-47 |
| Msa0075560 | Msa0328090 | 0.824764 | 6.763011e-54 | -8.615850e-47 |
| Msa0075560 | Msa0348370 | 0.802313 | 5.952363e-49 | -8.615850e-47 |
| Msa0075560 | Msa0349910 | 0.800269 | 1.559722e-48 | -8.615850e-47 |
| Msa0075560 | Msa0366510 | 0.832710 | 8.093539e-56 | -8.615850e-47 |
| Msa0075560 | Msa0374040 | 0.821972 | 3.038218e-53 | -8.615850e-47 |
| Msa0075560 | Msa0380680 | 0.804960 | 1.681033e-49 | -8.615850e-47 |
| Msa0075560 | Msa0396700 | 0.816653 | 4.950469e-52 | -8.615850e-47 |
| Msa0075560 | Msa0396730 | 0.806131 | 9.548618e-50 | -8.615850e-47 |
| Msa0075560 | Msa0414480 | 0.849664 | 2.796523e-60 | -8.615850e-47 |
| Msa0075560 | Msa0418160 | 0.800290 | 1.544565e-48 | -8.615850e-47 |
| Msa0075560 | Msa0444250 | 0.802478 | 5.505160e-49 | -8.615850e-47 |
| Msa0075560 | Msa0444400 | 0.809467 | 1.865107e-50 | -8.615850e-47 |
| Msa0075560 | Msa0449480 | 0.814174 | 1.762397e-51 | -8.615850e-47 |
| Msa0075560 | Msa0464310 | 0.819221 | 1.301175e-52 | -8.615850e-47 |
| Msa0075560 | Msa0469450 | 0.835152 | 1.981283e-56 | -8.615850e-47 |
| Msa0075560 | Msa0469460 | 0.810034 | 1.408383e-50 | -8.615850e-47 |
| Msa0075560 | Msa0490060 | 0.811889 | 5.585256e-51 | -8.615850e-47 |
| Msa0075560 | Msa0491760 | 0.806639 | 7.460157e-50 | -8.615850e-47 |
| Msa0075560 | Msa0491800 | 0.825305 | 5.040271e-54 | -8.615850e-47 |
| Msa0075560 | Msa0515130 | 0.811632 | 6.354485e-51 | -8.615850e-47 |
| Msa0075560 | Msa0515150 | 0.811538 | 6.660339e-51 | -8.615850e-47 |
| Msa0075560 | Msa0531030 | 0.819267 | 1.270723e-52 | -8.615850e-47 |
| Msa0075560 | Msa0531080 | 0.825574 | 4.353294e-54 | -8.615850e-47 |
| Msa0075560 | Msa0535570 | 0.852043 | 5.978242e-61 | -8.615850e-47 |
| Msa0075560 | Msa0538440 | 0.809775 | 1.601237e-50 | -8.615850e-47 |
| Msa0075560 | Msa0538450 | 0.805216 | 1.485852e-49 | -8.615850e-47 |
| Msa0075560 | Msa0538530 | 0.803272 | 3.773252e-49 | -8.615850e-47 |
| Msa0075560 | Msa0543740 | 0.817091 | 3.946435e-52 | -8.615850e-47 |
| Msa0075560 | Msa0549170 | 0.800095 | 1.692144e-48 | -8.615850e-47 |
| Msa0075560 | Msa0554660 | 0.824925 | 6.198581e-54 | -8.615850e-47 |
| Msa0075560 | Msa0555920 | 0.822901 | 1.848815e-53 | -8.615850e-47 |
| Msa0075560 | Msa0579530 | 0.813893 | 2.032835e-51 | -8.615850e-47 |
| Msa0075560 | Msa0587920 | 0.831806 | 1.354644e-55 | -8.615850e-47 |
| Msa0075560 | Msa0589460 | 0.803542 | 3.317845e-49 | -8.615850e-47 |
| Msa0075560 | Msa0589740 | 0.817780 | 2.761212e-52 | -8.615850e-47 |
| Msa0075560 | Msa0591490 | 0.866917 | 2.008137e-65 | -8.615850e-47 |
| Msa0075560 | Msa0599600 | 0.815052 | 1.126597e-51 | -8.615850e-47 |
| Msa0075560 | Msa0605470 | 0.826802 | 2.220819e-54 | -8.615850e-47 |
| Msa0075560 | Msa0609460 | 0.820695 | 5.987657e-53 | -8.615850e-47 |
| Msa0075560 | Msa0629720 | 0.816318 | 5.881369e-52 | -8.615850e-47 |
| Msa0075560 | Msa0631700 | 0.834639 | 2.668470e-56 | -8.615850e-47 |
| Msa0075560 | Msa0634290 | 0.803784 | 2.954393e-49 | -8.615850e-47 |
| Msa0075560 | Msa0640290 | 0.810248 | 1.266550e-50 | -8.615850e-47 |
| Msa0075560 | Msa0643840 | 0.849319 | 3.489653e-60 | -8.615850e-47 |
| Msa0075560 | Msa0650100 | 0.819206 | 1.311910e-52 | -8.615850e-47 |
| Msa0075560 | Msa0667600 | 0.803654 | 3.144607e-49 | -8.615850e-47 |
| Msa0075560 | Msa0670360 | 0.855738 | 5.158562e-62 | -8.615850e-47 |
| Msa0075560 | Msa0671640 | 0.802728 | 4.888026e-49 | -8.615850e-47 |
| Msa0075560 | Msa0678620 | 0.815556 | 8.702112e-52 | -8.615850e-47 |
| Msa0075560 | Msa0683690 | 0.805444 | 1.330963e-49 | -8.615850e-47 |
| Msa0075560 | Msa0685080 | 0.812471 | 4.169220e-51 | -8.615850e-47 |
| Msa0075560 | Msa0692090 | 0.820469 | 6.748014e-53 | -8.615850e-47 |
| Msa0075560 | Msa0711240 | 0.805314 | 1.417161e-49 | -8.615850e-47 |
| Msa0075560 | Msa0715220 | 0.811234 | 7.750436e-51 | -8.615850e-47 |
| Msa0075560 | Msa0727480 | 0.834598 | 2.731641e-56 | -8.615850e-47 |
| Msa0075560 | Msa0735280 | 0.818636 | 1.767599e-52 | -8.615850e-47 |
| Msa0075560 | Msa0768670 | 0.837286 | 5.684903e-57 | -8.615850e-47 |
| Msa0075560 | Msa0768720 | 0.833340 | 5.640944e-56 | -8.615850e-47 |
| Msa0075560 | Msa0777060 | 0.802122 | 6.515599e-49 | -8.615850e-47 |
| Msa0075560 | Msa0777070 | 0.806127 | 9.563571e-50 | -8.615850e-47 |
| Msa0075560 | Msa0777250 | 0.826023 | 3.405222e-54 | -8.615850e-47 |
| Msa0075560 | Msa0787860 | 0.804588 | 2.009639e-49 | -8.615850e-47 |
| Msa0075560 | Msa0814160 | 0.847029 | 1.497058e-59 | -8.615850e-47 |
| Msa0075560 | Msa0814230 | 0.832704 | 8.119244e-56 | -8.615850e-47 |
| Msa0075560 | Msa0816140 | 0.804095 | 2.545980e-49 | -8.615850e-47 |
| Msa0075560 | Msa0824850 | 0.809723 | 1.643462e-50 | -8.615850e-47 |
| Msa0075560 | Msa0824860 | 0.811534 | 6.671207e-51 | -8.615850e-47 |
| Msa0075560 | Msa0854840 | 0.822595 | 2.178131e-53 | -8.615850e-47 |
| Msa0075560 | Msa0861730 | 0.822658 | 2.106062e-53 | -8.615850e-47 |
| Msa0075560 | Msa0863840 | 0.817484 | 3.219640e-52 | -8.615850e-47 |
| Msa0075560 | Msa0863850 | 0.816683 | 4.873653e-52 | -8.615850e-47 |
| Msa0075560 | Msa0864160 | 0.813109 | 3.022413e-51 | -8.615850e-47 |
| Msa0075560 | Msa0883640 | 0.829150 | 6.047064e-55 | -8.615850e-47 |
| Msa0075560 | Msa0893840 | 0.813745 | 2.191288e-51 | -8.615850e-47 |
| Msa0075560 | Msa0896920 | 0.848628 | 5.429705e-60 | -8.615850e-47 |
| Msa0075560 | Msa0896950 | 0.846126 | 2.642069e-59 | -8.615850e-47 |
| Msa0075560 | Msa0902340 | 0.807683 | 4.485238e-50 | -8.615850e-47 |
| Msa0075560 | Msa0910830 | 0.830272 | 3.224702e-55 | -8.615850e-47 |
| Msa0075560 | Msa0913550 | 0.841945 | 3.493197e-58 | -8.615850e-47 |
| Msa0075560 | Msa0933590 | 0.811792 | 5.865229e-51 | -8.615850e-47 |
| Msa0075560 | Msa0933610 | 0.800805 | 1.212817e-48 | -8.615850e-47 |
| Msa0075560 | Msa0941120 | 0.848758 | 4.995923e-60 | -8.615850e-47 |
| Msa0075560 | Msa0946010 | 0.838600 | 2.612104e-57 | -8.615850e-47 |
| Msa0075560 | Msa0951150 | 0.834228 | 3.384631e-56 | -8.615850e-47 |
| Msa0075560 | Msa0960090 | 0.830743 | 2.473469e-55 | -8.615850e-47 |
| Msa0075560 | Msa0971880 | 0.805931 | 1.051814e-49 | -8.615850e-47 |
| Msa0075560 | Msa0985700 | 0.830744 | 2.471216e-55 | -8.615850e-47 |
| Msa0075560 | Msa0987640 | 0.813855 | 2.071951e-51 | -8.615850e-47 |
| Msa0075560 | Msa0990490 | 0.803050 | 4.194238e-49 | -8.615850e-47 |
| Msa0075560 | Msa0993450 | 0.813937 | 1.987146e-51 | -8.615850e-47 |
| Msa0075560 | Msa0996980 | 0.831509 | 1.603825e-55 | -8.615850e-47 |
| Msa0075560 | Msa1003110 | 0.810819 | 9.534888e-51 | -8.615850e-47 |
| Msa0075560 | Msa1006170 | 0.834335 | 3.180542e-56 | -8.615850e-47 |
| Msa0075560 | Msa1018590 | 0.801228 | 9.942710e-49 | -8.615850e-47 |
| Msa0075560 | Msa1021620 | 0.827838 | 1.254176e-54 | -8.615850e-47 |
| Msa0075560 | Msa1022490 | 0.824020 | 1.011870e-53 | -8.615850e-47 |
| Msa0075560 | Msa1022510 | 0.830825 | 2.360481e-55 | -8.615850e-47 |
| Msa0075560 | Msa1024350 | 0.838131 | 3.450891e-57 | -8.615850e-47 |
| Msa0075560 | Msa1026050 | 0.809539 | 1.799592e-50 | -8.615850e-47 |
| Msa0075560 | Msa1041910 | 0.812347 | 4.438342e-51 | -8.615850e-47 |
| Msa0075560 | Msa1048350 | 0.824783 | 6.693772e-54 | -8.615850e-47 |
| Msa0075560 | Msa1061670 | 0.847900 | 8.628999e-60 | -8.615850e-47 |
| Msa0075560 | Msa1064940 | 0.840610 | 7.839833e-58 | -8.615850e-47 |
| Msa0075560 | Msa1068080 | 0.800306 | 1.533436e-48 | -8.615850e-47 |
| Msa0075560 | Msa1076830 | 0.824036 | 1.003436e-53 | -8.615850e-47 |
| Msa0075560 | Msa1087380 | 0.817879 | 2.622359e-52 | -8.615850e-47 |
| Msa0075560 | Msa1099640 | 0.800386 | 1.476606e-48 | -8.615850e-47 |
| Msa0075560 | Msa1104960 | 0.810837 | 9.451994e-51 | -8.615850e-47 |
| Msa0075560 | Msa1106680 | 0.824583 | 7.459749e-54 | -8.615850e-47 |
| Msa0075560 | Msa1106960 | 0.843804 | 1.118193e-58 | -8.615850e-47 |
| Msa0075560 | Msa1109880 | 0.856353 | 3.406709e-62 | -8.615850e-47 |
| Msa0075560 | Msa1109890 | 0.849894 | 2.412391e-60 | -8.615850e-47 |
| Msa0075560 | Msa1120680 | 0.801455 | 8.933598e-49 | -8.615850e-47 |
| Msa0075560 | Msa1123010 | 0.802723 | 4.898860e-49 | -8.615850e-47 |
| Msa0075560 | Msa1133860 | 0.801982 | 6.961855e-49 | -8.615850e-47 |
| Msa0075560 | Msa1138110 | 0.823211 | 1.564969e-53 | -8.615850e-47 |
| Msa0075560 | Msa1147030 | 0.820889 | 5.403605e-53 | -8.615850e-47 |
| Msa0075560 | Msa1148210 | 0.814404 | 1.567143e-51 | -8.615850e-47 |
| Msa0075560 | Msa1149020 | 0.812052 | 5.146698e-51 | -8.615850e-47 |
| Msa0075560 | Msa1152180 | 0.807999 | 3.842022e-50 | -8.615850e-47 |
| Msa0075560 | Msa1155630 | 0.800189 | 1.619714e-48 | -8.615850e-47 |
| Msa0075560 | Msa1156240 | 0.813881 | 2.045040e-51 | -8.615850e-47 |
| Msa0075560 | Msa1167960 | 0.820068 | 8.336126e-53 | -8.615850e-47 |
| Msa0075560 | Msa1170340 | 0.819927 | 8.980533e-53 | -8.615850e-47 |
| Msa0075560 | Msa1181090 | 0.816742 | 4.727472e-52 | -8.615850e-47 |
| Msa0075560 | Msa1214960 | 0.810770 | 9.769272e-51 | -8.615850e-47 |
| Msa0075560 | Msa1233650 | 0.805681 | 1.186807e-49 | -8.615850e-47 |
| Msa0075560 | Msa1240710 | 0.807533 | 4.826201e-50 | -8.615850e-47 |
| Msa0075560 | Msa1262810 | 0.808451 | 3.077907e-50 | -8.615850e-47 |
| Msa0075560 | Msa1269050 | 0.835146 | 1.988622e-56 | -8.615850e-47 |
| Msa0075560 | Msa1300610 | 0.820060 | 8.373068e-53 | -8.615850e-47 |
| Msa0075560 | Msa1323030 | 0.826041 | 3.372623e-54 | -8.615850e-47 |
| Msa0075560 | Msa1323120 | 0.852267 | 5.163190e-61 | -8.615850e-47 |
| Msa0075560 | Msa1329740 | 0.833865 | 4.171524e-56 | -8.615850e-47 |
| Msa0075560 | Msa1355340 | 0.851048 | 1.143915e-60 | -8.615850e-47 |
| Msa0075560 | Msa1373560 | 0.800839 | 1.194008e-48 | -8.615850e-47 |
| Msa0075560 | Msa1376070 | 0.822222 | 2.658599e-53 | -8.615850e-47 |
| Msa0075560 | Msa1377520 | 0.818688 | 1.720303e-52 | -8.615850e-47 |
| Msa0075560 | Msa1380740 | 0.803398 | 3.553966e-49 | -8.615850e-47 |
| Msa0075560 | Msa1406840 | 0.819345 | 1.219555e-52 | -8.615850e-47 |
| Msa0075560 | Msa1407670 | 0.807155 | 5.804271e-50 | -8.615850e-47 |
| Msa0075560 | Msa1409600 | 0.821917 | 3.129029e-53 | -8.615850e-47 |
| Msa0075560 | Msa1411550 | 0.843594 | 1.273151e-58 | -8.615850e-47 |
| Msa0075560 | Msa1421120 | 0.806599 | 7.608306e-50 | -8.615850e-47 |
| Msa0075560 | Msa1445900 | 0.839659 | 1.387979e-57 | -8.615850e-47 |
| Msa0075560 | Msa1449770 | 0.809485 | 1.848910e-50 | -8.615850e-47 |
| Msa0075560 | Msa1453650 | 0.802337 | 5.886213e-49 | -8.615850e-47 |
| Msa0075560 | Msa1459610 | 0.842533 | 2.440700e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075560 | MtrunA17_Chr1g0184271 | 97.863 | 234 | 5 | 0 | 1 | 234 | 1 | 234 | 7.06e-176 | 482 |
| Msa0075560 | MtrunA17_Chr7g0261031 | 66.816 | 223 | 59 | 7 | 9 | 220 | 5 | 223 | 1.98e-96 | 281 |
| Msa0075560 | MtrunA17_Chr7g0260971 | 70.339 | 118 | 33 | 1 | 1 | 116 | 1 | 118 | 1.60e-55 | 176 |
| Msa0075560 | MtrunA17_Chr8g0351701 | 70.874 | 103 | 30 | 0 | 12 | 114 | 23 | 125 | 6.37e-52 | 168 |
| Msa0075560 | MtrunA17_Chr7g0245871 | 66.667 | 111 | 31 | 1 | 12 | 122 | 27 | 131 | 1.54e-50 | 165 |
| Msa0075560 | MtrunA17_Chr5g0435641 | 70.000 | 100 | 30 | 0 | 10 | 109 | 5 | 104 | 7.11e-50 | 161 |
| Msa0075560 | MtrunA17_Chr1g0184281 | 69.524 | 105 | 32 | 0 | 8 | 112 | 11 | 115 | 2.65e-49 | 160 |
| Msa0075560 | MtrunA17_Chr8g0351721 | 63.810 | 105 | 38 | 0 | 10 | 114 | 16 | 120 | 4.03e-49 | 160 |
| Msa0075560 | MtrunA17_Chr6g0460951 | 45.503 | 189 | 90 | 4 | 11 | 193 | 39 | 220 | 9.75e-48 | 157 |
| Msa0075560 | MtrunA17_Chr7g0245861 | 66.667 | 93 | 29 | 2 | 9 | 99 | 9 | 101 | 2.86e-41 | 137 |
| Msa0075560 | MtrunA17_Chr3g0114061 | 45.517 | 145 | 70 | 5 | 11 | 151 | 7 | 146 | 7.70e-36 | 124 |
| Msa0075560 | MtrunA17_Chr7g0227511 | 41.954 | 174 | 91 | 3 | 1 | 166 | 1 | 172 | 5.44e-35 | 122 |
| Msa0075560 | MtrunA17_Chr2g0311601 | 57.732 | 97 | 40 | 1 | 11 | 107 | 12 | 107 | 1.07e-34 | 121 |
| Msa0075560 | MtrunA17_Chr5g0438091 | 49.558 | 113 | 54 | 2 | 1 | 112 | 28 | 138 | 5.45e-34 | 120 |
| Msa0075560 | MtrunA17_Chr5g0437571 | 58.163 | 98 | 38 | 2 | 11 | 107 | 5 | 100 | 5.98e-34 | 120 |
| Msa0075560 | MtrunA17_Chr4g0043421 | 52.381 | 105 | 49 | 1 | 9 | 113 | 12 | 115 | 9.02e-34 | 119 |
| Msa0075560 | MtrunA17_Chr4g0058651 | 46.923 | 130 | 63 | 2 | 11 | 140 | 10 | 133 | 1.22e-33 | 119 |
| Msa0075560 | MtrunA17_Chr5g0437401 | 50.467 | 107 | 52 | 1 | 9 | 115 | 8 | 113 | 1.77e-33 | 119 |
| Msa0075560 | MtrunA17_Chr3g0106101 | 54.000 | 100 | 45 | 1 | 8 | 107 | 3 | 101 | 2.01e-33 | 119 |
| Msa0075560 | MtrunA17_Chr3g0117121 | 54.717 | 106 | 45 | 2 | 1 | 106 | 1 | 103 | 2.32e-33 | 119 |
| Msa0075560 | MtrunA17_Chr6g0460941 | 59.091 | 88 | 36 | 0 | 12 | 99 | 7 | 94 | 5.25e-32 | 112 |
| Msa0075560 | MtrunA17_Chr3g0129071 | 49.550 | 111 | 53 | 2 | 1 | 110 | 36 | 144 | 5.67e-32 | 117 |
| Msa0075560 | MtrunA17_Chr3g0097221 | 52.336 | 107 | 50 | 1 | 8 | 114 | 3 | 108 | 5.95e-32 | 118 |
| Msa0075560 | MtrunA17_Chr6g0449641 | 51.887 | 106 | 47 | 2 | 1 | 106 | 1 | 102 | 2.65e-31 | 112 |
| Msa0075560 | MtrunA17_Chr4g0030001 | 39.375 | 160 | 85 | 4 | 11 | 162 | 23 | 178 | 3.16e-31 | 113 |
| Msa0075560 | MtrunA17_Chr3g0115431 | 51.923 | 104 | 49 | 1 | 11 | 114 | 8 | 110 | 4.35e-31 | 114 |
| Msa0075560 | MtrunA17_Chr5g0402611 | 52.294 | 109 | 51 | 1 | 6 | 114 | 2 | 109 | 5.07e-31 | 116 |
| Msa0075560 | MtrunA17_Chr3g0113891 | 49.515 | 103 | 51 | 1 | 9 | 111 | 11 | 112 | 9.26e-31 | 112 |
| Msa0075560 | MtrunA17_Chr6g0449651 | 50.000 | 106 | 50 | 2 | 1 | 106 | 58 | 160 | 2.73e-29 | 108 |
| Msa0075560 | MtrunA17_Chr1g0200201 | 51.485 | 101 | 46 | 2 | 13 | 113 | 73 | 170 | 2.86e-28 | 107 |
| Msa0075560 | MtrunA17_Chr5g0432451 | 52.747 | 91 | 40 | 2 | 3 | 92 | 34 | 122 | 1.22e-26 | 102 |
| Msa0075560 | MtrunA17_Chr8g0353981 | 54.651 | 86 | 38 | 1 | 7 | 92 | 2 | 86 | 1.12e-25 | 100 |
| Msa0075560 | MtrunA17_Chr7g0225111 | 45.192 | 104 | 56 | 1 | 11 | 114 | 4 | 106 | 1.43e-25 | 96.7 |
| Msa0075560 | MtrunA17_Chr5g0444351 | 38.571 | 140 | 77 | 4 | 13 | 144 | 6 | 144 | 1.77e-24 | 94.7 |
| Msa0075560 | MtrunA17_Chr8g0374591 | 43.269 | 104 | 58 | 1 | 12 | 115 | 8 | 110 | 1.56e-20 | 84.0 |
| Msa0075560 | MtrunA17_Chr8g0374601 | 39.423 | 104 | 62 | 1 | 12 | 115 | 26 | 128 | 2.35e-19 | 84.3 |
| Msa0075560 | MtrunA17_Chr8g0342351 | 37.255 | 102 | 63 | 1 | 13 | 114 | 13 | 113 | 1.28e-18 | 82.0 |
| Msa0075560 | MtrunA17_Chr4g0059901 | 39.000 | 100 | 60 | 1 | 13 | 112 | 11 | 109 | 2.53e-18 | 81.3 |
| Msa0075560 | MtrunA17_Chr6g0452691 | 39.080 | 87 | 51 | 2 | 7 | 92 | 4 | 89 | 3.17e-16 | 73.9 |
| Msa0075560 | MtrunA17_Chr6g0452661 | 35.897 | 117 | 70 | 4 | 7 | 119 | 4 | 119 | 3.37e-16 | 75.5 |
| Msa0075560 | MtrunA17_Chr8g0374581 | 38.000 | 100 | 60 | 2 | 12 | 110 | 8 | 106 | 4.68e-16 | 74.3 |
| Msa0075560 | MtrunA17_Chr2g0330201 | 33.333 | 102 | 67 | 1 | 13 | 114 | 20 | 120 | 6.04e-16 | 75.5 |
| Msa0075560 | MtrunA17_Chr6g0452671 | 34.579 | 107 | 66 | 2 | 13 | 116 | 12 | 117 | 1.63e-15 | 72.4 |
| Msa0075560 | MtrunA17_Chr4g0040831 | 27.586 | 174 | 110 | 4 | 13 | 186 | 16 | 173 | 4.59e-15 | 71.2 |
| Msa0075560 | MtrunA17_Chr2g0326041 | 54.167 | 48 | 21 | 1 | 11 | 58 | 32 | 78 | 1.25e-12 | 62.0 |
| Msa0075560 | MtrunA17_Chr5g0439111 | 31.613 | 155 | 88 | 7 | 13 | 154 | 10 | 159 | 2.22e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0075560 | AT3G58190.1 | 51.570 | 223 | 88 | 4 | 12 | 233 | 11 | 214 | 6.67e-69 | 211 |
| Msa0075560 | AT2G42440.1 | 71.324 | 136 | 36 | 2 | 7 | 141 | 2 | 135 | 5.13e-65 | 202 |
| Msa0075560 | AT2G31310.1 | 47.115 | 208 | 78 | 3 | 10 | 214 | 5 | 183 | 1.52e-59 | 186 |
| Msa0075560 | AT2G42430.1 | 47.748 | 222 | 95 | 5 | 1 | 219 | 1 | 204 | 1.41e-57 | 183 |
| Msa0075560 | AT4G00210.1 | 56.934 | 137 | 56 | 2 | 4 | 137 | 2 | 138 | 2.43e-50 | 164 |
| Msa0075560 | AT3G03760.1 | 69.608 | 102 | 31 | 0 | 11 | 112 | 50 | 151 | 8.56e-50 | 164 |
| Msa0075560 | AT2G45420.1 | 71.000 | 100 | 29 | 0 | 15 | 114 | 40 | 139 | 2.44e-49 | 162 |
| Msa0075560 | AT5G06080.1 | 67.619 | 105 | 34 | 0 | 8 | 112 | 3 | 107 | 1.03e-48 | 158 |
| Msa0075560 | AT4G00220.1 | 71.000 | 100 | 29 | 0 | 15 | 114 | 20 | 119 | 1.49e-48 | 159 |
| Msa0075560 | AT2G45410.1 | 62.500 | 96 | 36 | 0 | 15 | 110 | 19 | 114 | 2.73e-42 | 142 |
| Msa0075560 | AT3G27650.1 | 56.250 | 96 | 41 | 1 | 11 | 106 | 38 | 132 | 3.06e-33 | 118 |
| Msa0075560 | AT5G63090.4 | 56.604 | 106 | 44 | 2 | 1 | 106 | 1 | 104 | 3.48e-33 | 119 |
| Msa0075560 | AT5G63090.3 | 56.604 | 106 | 44 | 2 | 1 | 106 | 1 | 104 | 3.48e-33 | 119 |
| Msa0075560 | AT5G63090.2 | 56.604 | 106 | 44 | 2 | 1 | 106 | 1 | 104 | 3.48e-33 | 119 |
| Msa0075560 | AT5G63090.1 | 56.604 | 106 | 44 | 2 | 1 | 106 | 1 | 104 | 3.48e-33 | 119 |
| Msa0075560 | AT2G30130.1 | 52.336 | 107 | 46 | 2 | 1 | 107 | 1 | 102 | 5.98e-32 | 115 |
| Msa0075560 | AT1G07900.1 | 53.608 | 97 | 44 | 1 | 11 | 107 | 32 | 127 | 2.81e-31 | 114 |
| Msa0075560 | AT1G16530.1 | 42.969 | 128 | 71 | 2 | 11 | 137 | 13 | 139 | 4.00e-31 | 112 |
| Msa0075560 | AT3G11090.1 | 42.222 | 135 | 76 | 2 | 9 | 143 | 8 | 140 | 1.01e-30 | 112 |
| Msa0075560 | AT2G28500.1 | 53.608 | 97 | 44 | 1 | 11 | 107 | 54 | 149 | 1.72e-30 | 113 |
| Msa0075560 | AT1G31320.1 | 50.515 | 97 | 47 | 1 | 3 | 99 | 4 | 99 | 5.00e-30 | 110 |
| Msa0075560 | AT5G66870.1 | 52.336 | 107 | 50 | 1 | 8 | 114 | 3 | 108 | 1.40e-29 | 112 |
| Msa0075560 | AT2G30340.2 | 46.218 | 119 | 61 | 2 | 6 | 123 | 47 | 163 | 2.37e-29 | 111 |
| Msa0075560 | AT2G30340.1 | 48.246 | 114 | 56 | 2 | 11 | 123 | 51 | 162 | 2.42e-29 | 111 |
| Msa0075560 | AT2G23660.2 | 50.000 | 102 | 50 | 1 | 11 | 112 | 4 | 104 | 7.79e-28 | 108 |
| Msa0075560 | AT2G23660.3 | 50.000 | 102 | 50 | 1 | 11 | 112 | 4 | 104 | 7.79e-28 | 108 |
| Msa0075560 | AT2G23660.1 | 50.000 | 102 | 50 | 1 | 11 | 112 | 4 | 104 | 7.79e-28 | 108 |
| Msa0075560 | AT1G65620.1 | 58.696 | 92 | 34 | 2 | 1 | 92 | 1 | 88 | 2.08e-27 | 104 |
| Msa0075560 | AT1G65620.4 | 58.696 | 92 | 34 | 2 | 1 | 92 | 1 | 88 | 2.08e-27 | 104 |
| Msa0075560 | AT1G65620.3 | 58.696 | 92 | 34 | 2 | 1 | 92 | 1 | 88 | 2.08e-27 | 104 |
| Msa0075560 | AT1G65620.5 | 58.696 | 92 | 34 | 2 | 1 | 92 | 1 | 88 | 2.08e-27 | 104 |
| Msa0075560 | AT1G65620.2 | 58.696 | 92 | 34 | 2 | 1 | 92 | 1 | 88 | 2.08e-27 | 104 |
| Msa0075560 | AT2G40470.2 | 52.809 | 89 | 39 | 2 | 5 | 92 | 13 | 99 | 7.42e-27 | 102 |
| Msa0075560 | AT2G40470.1 | 52.809 | 89 | 39 | 2 | 5 | 92 | 38 | 124 | 7.89e-27 | 103 |
| Msa0075560 | AT3G26660.1 | 43.137 | 102 | 57 | 1 | 13 | 114 | 6 | 106 | 1.00e-26 | 100 |
| Msa0075560 | AT3G26620.1 | 43.137 | 102 | 57 | 1 | 13 | 114 | 6 | 106 | 1.49e-26 | 99.8 |
| Msa0075560 | AT3G50510.1 | 36.842 | 152 | 85 | 3 | 11 | 158 | 11 | 155 | 8.69e-25 | 97.4 |
| Msa0075560 | AT3G50510.2 | 36.842 | 152 | 85 | 3 | 11 | 158 | 11 | 155 | 8.69e-25 | 97.4 |
| Msa0075560 | AT3G13850.1 | 38.596 | 114 | 60 | 3 | 13 | 118 | 37 | 148 | 1.47e-18 | 82.4 |
| Msa0075560 | AT5G35900.1 | 39.216 | 102 | 61 | 1 | 13 | 114 | 6 | 106 | 2.75e-16 | 75.1 |
| Msa0075560 | AT1G72980.1 | 36.364 | 110 | 69 | 1 | 3 | 112 | 4 | 112 | 5.07e-16 | 74.7 |
| Msa0075560 | AT3G47870.1 | 33.333 | 99 | 63 | 2 | 1 | 99 | 27 | 122 | 1.18e-13 | 69.3 |
| Msa0075560 | AT1G06280.1 | 38.667 | 75 | 45 | 1 | 13 | 87 | 25 | 98 | 1.31e-13 | 67.8 |
Find 38 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGACTTCAAGATCCTATTTA+TGG | 0.149642 | 1_2:+50996468 | Msa0075560:CDS |
| TCCCTAACAACACAATATTA+TGG | 0.175683 | 1_2:+50996950 | Msa0075560:CDS |
| TTGCCCAAGTTGGTGATTAT+TGG | 0.182263 | 1_2:-50996897 | None:intergenic |
| GACCTACATTCAGTGGCTTT+TGG | 0.265454 | 1_2:+50997124 | Msa0075560:CDS |
| AGTTCTGGTTCTGTTTCTTC+TGG | 0.281584 | 1_2:+50996237 | Msa0075560:CDS |
| TCCCATAATATTGTGTTGTT+AGG | 0.288317 | 1_2:-50996952 | None:intergenic |
| TGTGAAACACATCCATAAAT+AGG | 0.289533 | 1_2:-50996480 | None:intergenic |
| CCCTAACAACACAATATTAT+GGG | 0.308981 | 1_2:+50996951 | Msa0075560:CDS |
| GCTTCGCAACGATCACTTAC+AGG | 0.338863 | 1_2:-50996414 | None:intergenic |
| TGTCCTCCTGTTTGTTTCCA+TGG | 0.349396 | 1_2:-50997080 | None:intergenic |
| CCCATAATATTGTGTTGTTA+GGG | 0.384449 | 1_2:-50996951 | None:intergenic |
| TTGAGAAGAAAATGTATAAG+AGG | 0.389833 | 1_2:+50996285 | Msa0075560:CDS |
| TCGACTAAGATGGCTAGTTC+TGG | 0.422046 | 1_2:+50996222 | None:intergenic |
| GTTTCTTCTGGTTCTCCTTG+TGG | 0.446139 | 1_2:+50996249 | Msa0075560:CDS |
| GGTCAATTTACAAACACAAC+TGG | 0.458520 | 1_2:+50996748 | Msa0075560:CDS |
| GAAATTAAGAAACCTGTTGT+TGG | 0.459258 | 1_2:-50996515 | None:intergenic |
| CTAATTCCATGGAAACAAAC+AGG | 0.469030 | 1_2:+50997074 | Msa0075560:CDS |
| AATTCCAATAATCACCAACT+TGG | 0.477226 | 1_2:+50996893 | Msa0075560:CDS |
| TCCCTCAAGATCTTCAAACT+TGG | 0.513604 | 1_2:+50996858 | Msa0075560:CDS |
| TAAGAAATTCTTGCCCAAGT+TGG | 0.515236 | 1_2:-50996907 | None:intergenic |
| ATTAAGAAACCTGTTGTTGG+AGG | 0.525469 | 1_2:-50996512 | None:intergenic |
| GGAGAGTACTTCTAATTCCA+TGG | 0.526238 | 1_2:+50997063 | Msa0075560:CDS |
| ACATGGATCTAGACCCTATG+AGG | 0.533013 | 1_2:+50996987 | Msa0075560:CDS |
| TGGAAACAAACAGGAGGACA+TGG | 0.539981 | 1_2:+50997083 | Msa0075560:CDS |
| AACCAAGTTTGAAGATCTTG+AGG | 0.542420 | 1_2:-50996860 | None:intergenic |
| ACCAAGTTTGAAGATCTTGA+GGG | 0.556027 | 1_2:-50996859 | None:intergenic |
| ATGGGGATTTGATGAAGTTG+AGG | 0.564323 | 1_2:+50997102 | Msa0075560:CDS |
| ATTCCAATAATCACCAACTT+GGG | 0.570241 | 1_2:+50996894 | Msa0075560:CDS |
| TTAAGAAACCTGTTGTTGGA+GGG | 0.580635 | 1_2:-50996511 | None:intergenic |
| CTTCGCAACGATCACTTACA+GGG | 0.583775 | 1_2:-50996413 | None:intergenic |
| GGAAACAAACAGGAGGACAT+GGG | 0.607981 | 1_2:+50997084 | Msa0075560:CDS |
| AGTTGAGGACCTACATTCAG+TGG | 0.617361 | 1_2:+50997117 | Msa0075560:CDS |
| TTCATAAGAGATTGTAACAG+CGG | 0.623464 | 1_2:-50996436 | None:intergenic |
| TCTTCAAACTTGGTTCCATG+TGG | 0.625091 | 1_2:+50996868 | Msa0075560:CDS |
| ATCCAAAAGCCACTGAATGT+AGG | 0.630404 | 1_2:-50997126 | None:intergenic |
| GAAACAAACAGGAGGACATG+GGG | 0.658640 | 1_2:+50997085 | Msa0075560:CDS |
| TGGGAACAATACTCTCAACA+TGG | 0.666386 | 1_2:+50996970 | Msa0075560:CDS |
| ATTCCATGGAAACAAACAGG+AGG | 0.707323 | 1_2:+50997077 | Msa0075560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAAAAAATAATGAGA+AGG | - | chr1_2:50996540-50996559 | None:intergenic | 10.0% |
| !! | ATAATAAAAAAATAATGAGA+AGG | - | chr1_2:50996540-50996559 | None:intergenic | 10.0% |
| !! | ATAAACCAAATAAAAAAACA+AGG | + | chr1_2:50996634-50996653 | Msa0075560:intron | 15.0% |
| !! | ATAAACCAAATAAAAAAACA+AGG | + | chr1_2:50996634-50996653 | Msa0075560:intron | 15.0% |
| !!! | TTTTTATTTGGTTTATGTCA+TGG | - | chr1_2:50996630-50996649 | None:intergenic | 20.0% |
| !!! | TTGAACCTTGTTTTTTTATT+TGG | - | chr1_2:50996642-50996661 | None:intergenic | 20.0% |
| !!! | GAGAATTAGATTTTTCATTA+GGG | - | chr1_2:50996832-50996851 | None:intergenic | 20.0% |
| !!! | AGAGAATTAGATTTTTCATT+AGG | - | chr1_2:50996833-50996852 | None:intergenic | 20.0% |
| !!! | AATTTTCATAATTCCTCATA+GGG | - | chr1_2:50997003-50997022 | None:intergenic | 20.0% |
| !!! | TTTTTATTTGGTTTATGTCA+TGG | - | chr1_2:50996630-50996649 | None:intergenic | 20.0% |
| !!! | TTGAACCTTGTTTTTTTATT+TGG | - | chr1_2:50996642-50996661 | None:intergenic | 20.0% |
| !!! | GAGAATTAGATTTTTCATTA+GGG | - | chr1_2:50996832-50996851 | None:intergenic | 20.0% |
| !!! | AGAGAATTAGATTTTTCATT+AGG | - | chr1_2:50996833-50996852 | None:intergenic | 20.0% |
| !!! | AATTTTCATAATTCCTCATA+GGG | - | chr1_2:50997003-50997022 | None:intergenic | 20.0% |
| !! | TTTTCTTCTCAAAAATTTGC+AGG | - | chr1_2:50996277-50996296 | None:intergenic | 25.0% |
| ! | TTGAGAAGAAAATGTATAAG+AGG | + | chr1_2:50996285-50996304 | Msa0075560:CDS | 25.0% |
| !!! | GCAATTGATTTTGATTTTGT+AGG | + | chr1_2:50996724-50996743 | Msa0075560:intron | 25.0% |
| !!! | ATTGATTTTGATTTTGTAGG+TGG | + | chr1_2:50996727-50996746 | Msa0075560:intron | 25.0% |
| !! | TTTTTCATTAGGGTTTTCAT+TGG | - | chr1_2:50996822-50996841 | None:intergenic | 25.0% |
| !! | GAATTTTCATAATTCCTCAT+AGG | - | chr1_2:50997004-50997023 | None:intergenic | 25.0% |
| !! | TTTTCTTCTCAAAAATTTGC+AGG | - | chr1_2:50996277-50996296 | None:intergenic | 25.0% |
| ! | TTGAGAAGAAAATGTATAAG+AGG | + | chr1_2:50996285-50996304 | Msa0075560:CDS | 25.0% |
| !!! | GCAATTGATTTTGATTTTGT+AGG | + | chr1_2:50996724-50996743 | Msa0075560:intron | 25.0% |
| !!! | ATTGATTTTGATTTTGTAGG+TGG | + | chr1_2:50996727-50996746 | Msa0075560:intron | 25.0% |
| !! | TTTTTCATTAGGGTTTTCAT+TGG | - | chr1_2:50996822-50996841 | None:intergenic | 25.0% |
| !! | GAATTTTCATAATTCCTCAT+AGG | - | chr1_2:50997004-50997023 | None:intergenic | 25.0% |
| CCTTGTTCATGAGAAAAATA+AGG | - | chr1_2:50996324-50996343 | None:intergenic | 30.0% | |
| !!! | CCTTATTTTTCTCATGAACA+AGG | + | chr1_2:50996321-50996340 | Msa0075560:CDS | 30.0% |
| !! | ACATTTTTCAGCCATTCATA+AGG | + | chr1_2:50996350-50996369 | Msa0075560:CDS | 30.0% |
| TTCATAAGAGATTGTAACAG+CGG | - | chr1_2:50996439-50996458 | None:intergenic | 30.0% | |
| AGACTTCAAGATCCTATTTA+TGG | + | chr1_2:50996468-50996487 | Msa0075560:CDS | 30.0% | |
| TGTGAAACACATCCATAAAT+AGG | - | chr1_2:50996483-50996502 | None:intergenic | 30.0% | |
| GAAATTAAGAAACCTGTTGT+TGG | - | chr1_2:50996518-50996537 | None:intergenic | 30.0% | |
| ! | GATTATTGGAATTTTCCACA+TGG | - | chr1_2:50996886-50996905 | None:intergenic | 30.0% |
| AATTCCAATAATCACCAACT+TGG | + | chr1_2:50996893-50996912 | Msa0075560:CDS | 30.0% | |
| ATTCCAATAATCACCAACTT+GGG | + | chr1_2:50996894-50996913 | Msa0075560:CDS | 30.0% | |
| TCCCTAACAACACAATATTA+TGG | + | chr1_2:50996950-50996969 | Msa0075560:CDS | 30.0% | |
| ! | CCCATAATATTGTGTTGTTA+GGG | - | chr1_2:50996954-50996973 | None:intergenic | 30.0% |
| CCCTAACAACACAATATTAT+GGG | + | chr1_2:50996951-50996970 | Msa0075560:CDS | 30.0% | |
| ! | TCCCATAATATTGTGTTGTT+AGG | - | chr1_2:50996955-50996974 | None:intergenic | 30.0% |
| CCTTGTTCATGAGAAAAATA+AGG | - | chr1_2:50996324-50996343 | None:intergenic | 30.0% | |
| !!! | CCTTATTTTTCTCATGAACA+AGG | + | chr1_2:50996321-50996340 | Msa0075560:CDS | 30.0% |
| !! | ACATTTTTCAGCCATTCATA+AGG | + | chr1_2:50996350-50996369 | Msa0075560:CDS | 30.0% |
| TTCATAAGAGATTGTAACAG+CGG | - | chr1_2:50996439-50996458 | None:intergenic | 30.0% | |
| AGACTTCAAGATCCTATTTA+TGG | + | chr1_2:50996468-50996487 | Msa0075560:CDS | 30.0% | |
| TGTGAAACACATCCATAAAT+AGG | - | chr1_2:50996483-50996502 | None:intergenic | 30.0% | |
| GAAATTAAGAAACCTGTTGT+TGG | - | chr1_2:50996518-50996537 | None:intergenic | 30.0% | |
| ! | GATTATTGGAATTTTCCACA+TGG | - | chr1_2:50996886-50996905 | None:intergenic | 30.0% |
| AATTCCAATAATCACCAACT+TGG | + | chr1_2:50996893-50996912 | Msa0075560:CDS | 30.0% | |
| ATTCCAATAATCACCAACTT+GGG | + | chr1_2:50996894-50996913 | Msa0075560:CDS | 30.0% | |
| TCCCTAACAACACAATATTA+TGG | + | chr1_2:50996950-50996969 | Msa0075560:CDS | 30.0% | |
| ! | CCCATAATATTGTGTTGTTA+GGG | - | chr1_2:50996954-50996973 | None:intergenic | 30.0% |
| CCCTAACAACACAATATTAT+GGG | + | chr1_2:50996951-50996970 | Msa0075560:CDS | 30.0% | |
| ! | TCCCATAATATTGTGTTGTT+AGG | - | chr1_2:50996955-50996974 | None:intergenic | 30.0% |
| ! | TCAGCCATTCATAAGGTTTT+TGG | + | chr1_2:50996357-50996376 | Msa0075560:CDS | 35.0% |
| TGCACCAAAAACCTTATGAA+TGG | - | chr1_2:50996364-50996383 | None:intergenic | 35.0% | |
| TTAAGAAACCTGTTGTTGGA+GGG | - | chr1_2:50996514-50996533 | None:intergenic | 35.0% | |
| ATTAAGAAACCTGTTGTTGG+AGG | - | chr1_2:50996515-50996534 | None:intergenic | 35.0% | |
| GGTCAATTTACAAACACAAC+TGG | + | chr1_2:50996748-50996767 | Msa0075560:CDS | 35.0% | |
| ACCAAGTTTGAAGATCTTGA+GGG | - | chr1_2:50996862-50996881 | None:intergenic | 35.0% | |
| AACCAAGTTTGAAGATCTTG+AGG | - | chr1_2:50996863-50996882 | None:intergenic | 35.0% | |
| TAAGAAATTCTTGCCCAAGT+TGG | - | chr1_2:50996910-50996929 | None:intergenic | 35.0% | |
| !!! | CACTTCATTTTCTAGCTTTG+AGG | + | chr1_2:50997042-50997061 | Msa0075560:CDS | 35.0% |
| CTAATTCCATGGAAACAAAC+AGG | + | chr1_2:50997074-50997093 | Msa0075560:CDS | 35.0% | |
| ! | TCAGCCATTCATAAGGTTTT+TGG | + | chr1_2:50996357-50996376 | Msa0075560:CDS | 35.0% |
| TGCACCAAAAACCTTATGAA+TGG | - | chr1_2:50996364-50996383 | None:intergenic | 35.0% | |
| TTAAGAAACCTGTTGTTGGA+GGG | - | chr1_2:50996514-50996533 | None:intergenic | 35.0% | |
| ATTAAGAAACCTGTTGTTGG+AGG | - | chr1_2:50996515-50996534 | None:intergenic | 35.0% | |
| GGTCAATTTACAAACACAAC+TGG | + | chr1_2:50996748-50996767 | Msa0075560:CDS | 35.0% | |
| ACCAAGTTTGAAGATCTTGA+GGG | - | chr1_2:50996862-50996881 | None:intergenic | 35.0% | |
| AACCAAGTTTGAAGATCTTG+AGG | - | chr1_2:50996863-50996882 | None:intergenic | 35.0% | |
| TAAGAAATTCTTGCCCAAGT+TGG | - | chr1_2:50996910-50996929 | None:intergenic | 35.0% | |
| !!! | CACTTCATTTTCTAGCTTTG+AGG | + | chr1_2:50997042-50997061 | Msa0075560:CDS | 35.0% |
| CTAATTCCATGGAAACAAAC+AGG | + | chr1_2:50997074-50997093 | Msa0075560:CDS | 35.0% | |
| !! | AGTTCTGGTTCTGTTTCTTC+TGG | + | chr1_2:50996237-50996256 | Msa0075560:CDS | 40.0% |
| AAAAATTTGCAGGCTCCACA+AGG | - | chr1_2:50996267-50996286 | None:intergenic | 40.0% | |
| !! | TATTTTTGCCCTCCAACAAC+AGG | + | chr1_2:50996503-50996522 | Msa0075560:CDS | 40.0% |
| TCCCTCAAGATCTTCAAACT+TGG | + | chr1_2:50996858-50996877 | Msa0075560:CDS | 40.0% | |
| TCTTCAAACTTGGTTCCATG+TGG | + | chr1_2:50996868-50996887 | Msa0075560:CDS | 40.0% | |
| !! | TTGCCCAAGTTGGTGATTAT+TGG | - | chr1_2:50996900-50996919 | None:intergenic | 40.0% |
| TGGGAACAATACTCTCAACA+TGG | + | chr1_2:50996970-50996989 | Msa0075560:CDS | 40.0% | |
| !! | GGAGAGTACTTCTAATTCCA+TGG | + | chr1_2:50997063-50997082 | Msa0075560:CDS | 40.0% |
| ATTCCATGGAAACAAACAGG+AGG | + | chr1_2:50997077-50997096 | Msa0075560:CDS | 40.0% | |
| ATGGGGATTTGATGAAGTTG+AGG | + | chr1_2:50997102-50997121 | Msa0075560:CDS | 40.0% | |
| ATCCAAAAGCCACTGAATGT+AGG | - | chr1_2:50997129-50997148 | None:intergenic | 40.0% | |
| !! | AGTTCTGGTTCTGTTTCTTC+TGG | + | chr1_2:50996237-50996256 | Msa0075560:CDS | 40.0% |
| AAAAATTTGCAGGCTCCACA+AGG | - | chr1_2:50996267-50996286 | None:intergenic | 40.0% | |
| !! | TATTTTTGCCCTCCAACAAC+AGG | + | chr1_2:50996503-50996522 | Msa0075560:CDS | 40.0% |
| TCCCTCAAGATCTTCAAACT+TGG | + | chr1_2:50996858-50996877 | Msa0075560:CDS | 40.0% | |
| TCTTCAAACTTGGTTCCATG+TGG | + | chr1_2:50996868-50996887 | Msa0075560:CDS | 40.0% | |
| !! | TTGCCCAAGTTGGTGATTAT+TGG | - | chr1_2:50996900-50996919 | None:intergenic | 40.0% |
| TGGGAACAATACTCTCAACA+TGG | + | chr1_2:50996970-50996989 | Msa0075560:CDS | 40.0% | |
| !! | GGAGAGTACTTCTAATTCCA+TGG | + | chr1_2:50997063-50997082 | Msa0075560:CDS | 40.0% |
| ATTCCATGGAAACAAACAGG+AGG | + | chr1_2:50997077-50997096 | Msa0075560:CDS | 40.0% | |
| ATGGGGATTTGATGAAGTTG+AGG | + | chr1_2:50997102-50997121 | Msa0075560:CDS | 40.0% | |
| ATCCAAAAGCCACTGAATGT+AGG | - | chr1_2:50997129-50997148 | None:intergenic | 40.0% | |
| !! | GTTTCTTCTGGTTCTCCTTG+TGG | + | chr1_2:50996249-50996268 | Msa0075560:CDS | 45.0% |
| CTTCGCAACGATCACTTACA+GGG | - | chr1_2:50996416-50996435 | None:intergenic | 45.0% | |
| ACATGGATCTAGACCCTATG+AGG | + | chr1_2:50996987-50997006 | Msa0075560:CDS | 45.0% | |
| TGTCCTCCTGTTTGTTTCCA+TGG | - | chr1_2:50997083-50997102 | None:intergenic | 45.0% | |
| TGGAAACAAACAGGAGGACA+TGG | + | chr1_2:50997083-50997102 | Msa0075560:CDS | 45.0% | |
| GGAAACAAACAGGAGGACAT+GGG | + | chr1_2:50997084-50997103 | Msa0075560:CDS | 45.0% | |
| GAAACAAACAGGAGGACATG+GGG | + | chr1_2:50997085-50997104 | Msa0075560:CDS | 45.0% | |
| AGTTGAGGACCTACATTCAG+TGG | + | chr1_2:50997117-50997136 | Msa0075560:CDS | 45.0% | |
| ! | GACCTACATTCAGTGGCTTT+TGG | + | chr1_2:50997124-50997143 | Msa0075560:CDS | 45.0% |
| !! | GTTTCTTCTGGTTCTCCTTG+TGG | + | chr1_2:50996249-50996268 | Msa0075560:CDS | 45.0% |
| CTTCGCAACGATCACTTACA+GGG | - | chr1_2:50996416-50996435 | None:intergenic | 45.0% | |
| ACATGGATCTAGACCCTATG+AGG | + | chr1_2:50996987-50997006 | Msa0075560:CDS | 45.0% | |
| TGTCCTCCTGTTTGTTTCCA+TGG | - | chr1_2:50997083-50997102 | None:intergenic | 45.0% | |
| TGGAAACAAACAGGAGGACA+TGG | + | chr1_2:50997083-50997102 | Msa0075560:CDS | 45.0% | |
| GGAAACAAACAGGAGGACAT+GGG | + | chr1_2:50997084-50997103 | Msa0075560:CDS | 45.0% | |
| GAAACAAACAGGAGGACATG+GGG | + | chr1_2:50997085-50997104 | Msa0075560:CDS | 45.0% | |
| AGTTGAGGACCTACATTCAG+TGG | + | chr1_2:50997117-50997136 | Msa0075560:CDS | 45.0% | |
| ! | GACCTACATTCAGTGGCTTT+TGG | + | chr1_2:50997124-50997143 | Msa0075560:CDS | 45.0% |
| GCTTCGCAACGATCACTTAC+AGG | - | chr1_2:50996417-50996436 | None:intergenic | 50.0% | |
| GCTTCGCAACGATCACTTAC+AGG | - | chr1_2:50996417-50996436 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 50996231 | 50997156 | 50996231 | ID=Msa0075560;Name=Msa0075560 |
| chr1_2 | mRNA | 50996231 | 50997156 | 50996231 | ID=Msa0075560-mRNA-1;Parent=Msa0075560;Name=Msa0075560-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|234 |
| chr1_2 | exon | 50996231 | 50996524 | 50996231 | ID=Msa0075560-mRNA-1:exon:15699;Parent=Msa0075560-mRNA-1 |
| chr1_2 | exon | 50996746 | 50997156 | 50996746 | ID=Msa0075560-mRNA-1:exon:15700;Parent=Msa0075560-mRNA-1 |
| chr1_2 | CDS | 50996231 | 50996524 | 50996231 | ID=Msa0075560-mRNA-1:cds;Parent=Msa0075560-mRNA-1 |
| chr1_2 | CDS | 50996746 | 50997156 | 50996746 | ID=Msa0075560-mRNA-1:cds;Parent=Msa0075560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
