Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010840 | XP_003621746.2 | 89.920 | 377 | 12 | 2 | 1 | 351 | 1 | 377 | 0.0 | 682 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010840 | sp|Q5XV40|LAZY1_ARATH | 31.472 | 394 | 185 | 15 | 1 | 351 | 1 | 352 | 1.33e-33 | 131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010840 | G7KUR7 | 89.920 | 377 | 12 | 2 | 1 | 351 | 1 | 377 | 0.0 | 682 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0050990 | Msa1010840 | 0.802785 | 4.757163e-49 | -8.615850e-47 |
| Msa0688500 | Msa1010840 | 0.809189 | 2.139726e-50 | -8.615850e-47 |
| Msa0739580 | Msa1010840 | 0.806718 | 7.180438e-50 | -8.615850e-47 |
| Msa0782360 | Msa1010840 | 0.828483 | 8.768182e-55 | -8.615850e-47 |
| Msa0197100 | Msa1010840 | 0.834972 | 2.200391e-56 | -8.615850e-47 |
| Msa0212150 | Msa1010840 | 0.874699 | 5.507538e-68 | -8.615850e-47 |
| Msa0213040 | Msa1010840 | 0.803934 | 2.750235e-49 | -8.615850e-47 |
| Msa0221290 | Msa1010840 | 0.804805 | 1.811269e-49 | -8.615850e-47 |
| Msa1010840 | Msa1037910 | 0.802750 | 4.836482e-49 | -8.615850e-47 |
| Msa1010840 | Msa1052360 | 0.930422 | 1.675564e-93 | -8.615850e-47 |
| Msa1010840 | Msa1070420 | 0.801777 | 7.670920e-49 | -8.615850e-47 |
| Msa1010840 | Msa1096210 | 0.944186 | 3.091422e-103 | -8.615850e-47 |
| Msa1010840 | Msa1129970 | 0.819748 | 9.869778e-53 | -8.615850e-47 |
| Msa1010840 | Msa1140640 | 0.922709 | 6.910613e-89 | -8.615850e-47 |
| Msa1010840 | Msa1200420 | 0.803512 | 3.365123e-49 | -8.615850e-47 |
| Msa1010840 | Msa1201110 | 0.839620 | 1.421299e-57 | -8.615850e-47 |
| Msa1010840 | Msa1233560 | 0.833716 | 4.546558e-56 | -8.615850e-47 |
| Msa1010840 | Msa1253450 | 0.810954 | 8.917007e-51 | -8.615850e-47 |
| Msa1010840 | Msa1313970 | 0.818317 | 2.087696e-52 | -8.615850e-47 |
| Msa1010840 | Msa1406780 | 0.808958 | 2.398194e-50 | -8.615850e-47 |
| Msa1010840 | Msa1431850 | 0.809728 | 1.638947e-50 | -8.615850e-47 |
| Msa0239030 | Msa1010840 | 0.854547 | 1.144711e-61 | -8.615850e-47 |
| Msa0252770 | Msa1010840 | 0.845887 | 3.067171e-59 | -8.615850e-47 |
| Msa0276740 | Msa1010840 | 0.842774 | 2.105751e-58 | -8.615850e-47 |
| Msa0289920 | Msa1010840 | 0.867334 | 1.477561e-65 | -8.615850e-47 |
| Msa0292170 | Msa1010840 | 0.809830 | 1.558759e-50 | -8.615850e-47 |
| Msa0298240 | Msa1010840 | 0.817604 | 3.025636e-52 | -8.615850e-47 |
| Msa0306120 | Msa1010840 | 0.822664 | 2.098746e-53 | -8.615850e-47 |
| Msa0316680 | Msa1010840 | 0.842092 | 3.192579e-58 | -8.615850e-47 |
| Msa0329620 | Msa1010840 | 0.830721 | 2.503716e-55 | -8.615850e-47 |
| Msa0506980 | Msa1010840 | 0.800874 | 1.174486e-48 | -8.615850e-47 |
| Msa0537360 | Msa1010840 | 0.814933 | 1.196899e-51 | -8.615850e-47 |
| Msa0591790 | Msa1010840 | 0.813986 | 1.939086e-51 | -8.615850e-47 |
| Msa0594090 | Msa1010840 | 0.800979 | 1.117503e-48 | -8.615850e-47 |
| Msa0849280 | Msa1010840 | 0.827933 | 1.189765e-54 | -8.615850e-47 |
| Msa0851020 | Msa1010840 | 0.824144 | 9.465332e-54 | -8.615850e-47 |
| Msa0860280 | Msa1010840 | 0.838118 | 3.475997e-57 | -8.615850e-47 |
| Msa0895790 | Msa1010840 | 0.815931 | 7.179413e-52 | -8.615850e-47 |
| Msa0911540 | Msa1010840 | 0.811069 | 8.418114e-51 | -8.615850e-47 |
| Msa0964840 | Msa1010840 | 0.809769 | 1.606402e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010840 | MtrunA17_Chr7g0222391 | 89.920 | 377 | 12 | 2 | 1 | 351 | 1 | 377 | 0.0 | 682 |
| Msa1010840 | MtrunA17_Chr3g0122881 | 40.633 | 411 | 138 | 16 | 1 | 351 | 1 | 365 | 6.02e-69 | 221 |
| Msa1010840 | MtrunA17_Chr7g0224731 | 32.275 | 378 | 187 | 17 | 1 | 351 | 1 | 336 | 4.18e-41 | 147 |
| Msa1010840 | MtrunA17_Chr7g0224671 | 26.108 | 406 | 188 | 17 | 1 | 353 | 18 | 364 | 1.48e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1010840 | AT5G14090.1 | 31.472 | 394 | 185 | 15 | 1 | 351 | 1 | 352 | 1.35e-34 | 131 |
| Msa1010840 | AT5G14090.2 | 33.594 | 256 | 110 | 8 | 1 | 227 | 1 | 225 | 3.01e-29 | 115 |
Find 79 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCCAACTGTTGAACTTTC+TGG | 0.088694 | 7_1:+14172658 | None:intergenic |
| TTGAATGGCAAAGAAGAAAT+TGG | 0.185406 | 7_1:-14171511 | Msa1010840:CDS |
| CTTTATCATCAATATTATTA+TGG | 0.201093 | 7_1:+14171311 | None:intergenic |
| ATACAGTTTGGGTTGATAAA+TGG | 0.211915 | 7_1:-14171398 | Msa1010840:three_prime_UTR |
| AATGATATTTGGAAAACTTT+TGG | 0.252376 | 7_1:-14170955 | Msa1010840:three_prime_UTR |
| TTGGCTGATGAGATTTCTTT+TGG | 0.260026 | 7_1:-14174425 | Msa1010840:CDS |
| CAAGAAGATGAATCTTCTTC+TGG | 0.279543 | 7_1:+14172553 | None:intergenic |
| TTCCCTGGTTTCCTTGCAAT+TGG | 0.281068 | 7_1:-14174875 | Msa1010840:CDS |
| ATAAAGCATAATTGATTTAG+AGG | 0.291911 | 7_1:-14171263 | Msa1010840:three_prime_UTR |
| GAAATATTCTGCTTTGAATA+TGG | 0.298504 | 7_1:-14174354 | Msa1010840:CDS |
| GAAGAACATGAAGAAGAATA+TGG | 0.306054 | 7_1:-14174935 | Msa1010840:CDS |
| TTGAATCTGATTCCAAGATT+TGG | 0.307455 | 7_1:+14175022 | None:intergenic |
| CATAATAATATTGATGATAA+AGG | 0.325277 | 7_1:-14171310 | Msa1010840:three_prime_UTR |
| CCTTTACAAGGTTATTTGTT+TGG | 0.326980 | 7_1:-14174539 | Msa1010840:CDS |
| GATGAGTTAGAGAAAGTTCT+TGG | 0.327038 | 7_1:-14174725 | Msa1010840:CDS |
| TTTGTGTCTGTTCCTTCAAT+TGG | 0.329555 | 7_1:+14174572 | None:intergenic |
| AAGAAGATTCATCTTCTTGC+AGG | 0.336701 | 7_1:-14172549 | Msa1010840:CDS |
| GTCGATGGATTCGATGAAAT+TGG | 0.342162 | 7_1:+14174833 | None:intergenic |
| AGCTGAGAGTAAACTCAATA+AGG | 0.352063 | 7_1:-14174246 | Msa1010840:intron |
| AACTTCAGAAAATCATTTGC+TGG | 0.355575 | 7_1:-14174974 | Msa1010840:CDS |
| TGTTTGTGACAAATACAGTT+TGG | 0.367077 | 7_1:-14171410 | Msa1010840:three_prime_UTR |
| TGAATGGCAAAGAAGAAATT+GGG | 0.405613 | 7_1:-14171510 | Msa1010840:CDS |
| TCAACAGTTGGACACAAATC+TGG | 0.407798 | 7_1:-14172649 | Msa1010840:CDS |
| CATCTTCTTGCAGGGAGCAT+TGG | 0.416708 | 7_1:-14172540 | Msa1010840:CDS |
| TTCCTTGCAATTGGAACACT+TGG | 0.416969 | 7_1:-14174866 | Msa1010840:CDS |
| GGATTCCCTGCTATTACATC+AGG | 0.417990 | 7_1:+14171023 | None:intergenic |
| ACATACTTGCTTAACAAAAC+AGG | 0.421389 | 7_1:+14171002 | None:intergenic |
| TCTAGATTCTCCATATGTTC+CGG | 0.422180 | 7_1:-14172693 | Msa1010840:intron |
| ATGCACAAGGTAGCCTTTGT+TGG | 0.429984 | 7_1:+14172576 | None:intergenic |
| GCTATGTTTGATCTCTTCCC+TGG | 0.438163 | 7_1:-14174890 | Msa1010840:CDS |
| TGAACTGAGATTTGAAAAGA+TGG | 0.456924 | 7_1:+14174809 | None:intergenic |
| TCATAGTATGTACTACGAAA+TGG | 0.457396 | 7_1:-14171343 | Msa1010840:three_prime_UTR |
| TGCACAAGGTAGCCTTTGTT+GGG | 0.462363 | 7_1:+14172577 | None:intergenic |
| GTTTGTGACAAATACAGTTT+GGG | 0.470209 | 7_1:-14171409 | Msa1010840:three_prime_UTR |
| GTTCCAATTGCAAGGAAACC+AGG | 0.476054 | 7_1:+14174872 | None:intergenic |
| TTTAGTTCTAGAGCTTTGAA+TGG | 0.480826 | 7_1:-14171526 | Msa1010840:CDS |
| GTCAGCATAGTAACAATAAG+TGG | 0.484365 | 7_1:-14174599 | Msa1010840:CDS |
| TACTTCTTCCAGTGCTGACA+TGG | 0.492523 | 7_1:+14174651 | None:intergenic |
| TATTTCTTCCAGTGCTGACA+TGG | 0.495730 | 7_1:+14174627 | None:intergenic |
| ATTTGATAAAAGAAATGAAA+GGG | 0.497913 | 7_1:-14174384 | Msa1010840:CDS |
| AATGCTGTTTGTCCTTTACA+AGG | 0.501835 | 7_1:-14174551 | Msa1010840:CDS |
| ACATTACACATTACTAATAG+AGG | 0.506557 | 7_1:+14171471 | None:intergenic |
| CAGCACCCTGATGTAATAGC+AGG | 0.513039 | 7_1:-14171029 | Msa1010840:three_prime_UTR |
| AGAAGTAGCCATGTCAGCAC+TGG | 0.514813 | 7_1:-14174635 | Msa1010840:CDS |
| GTGTTTGTACTTATATATTG+TGG | 0.523147 | 7_1:-14171447 | Msa1010840:three_prime_UTR |
| GTTGATAAATGGAATAATTG+AGG | 0.532349 | 7_1:-14171387 | Msa1010840:three_prime_UTR |
| ATTTCGTAGTACATACTATG+AGG | 0.535027 | 7_1:+14171345 | None:intergenic |
| AGTTACTTGGCTGGATGCAT+AGG | 0.536259 | 7_1:-14176158 | Msa1010840:CDS |
| ATAAGTGGAAAACCAATTGA+AGG | 0.538137 | 7_1:-14174584 | Msa1010840:CDS |
| CCAAACAAATAACCTTGTAA+AGG | 0.544230 | 7_1:+14174539 | None:intergenic |
| AATACATGGCTACATCTACA+TGG | 0.551307 | 7_1:+14171237 | None:intergenic |
| AGAAACAGCCATGTCAGCAC+TGG | 0.552963 | 7_1:-14174659 | Msa1010840:CDS |
| ACATACTATGAGGCAGACAT+TGG | 0.560655 | 7_1:+14171355 | None:intergenic |
| ATCCAAGTGTTCCAATTGCA+AGG | 0.561455 | 7_1:+14174864 | None:intergenic |
| TCTTGAATATCAAAAGATGA+CGG | 0.567742 | 7_1:-14176278 | Msa1010840:intron |
| ATTTGAAAAGATGGTGTCGA+TGG | 0.578297 | 7_1:+14174818 | None:intergenic |
| ATGGATTCGATGAAATTGGT+TGG | 0.584184 | 7_1:+14174837 | None:intergenic |
| TGCCCGCATGATATAATACA+TGG | 0.585738 | 7_1:+14171223 | None:intergenic |
| AGAAGATTCATCTTCTTGCA+GGG | 0.588231 | 7_1:-14172548 | Msa1010840:CDS |
| GAAACAGCAGTTACTAGTGT+TGG | 0.588615 | 7_1:-14174497 | Msa1010840:CDS |
| CATCCAGAAAGTTCAACAGT+TGG | 0.600759 | 7_1:-14172661 | Msa1010840:CDS |
| TCAGTGTTAAGCAAGGGACC+AGG | 0.604317 | 7_1:-14171186 | Msa1010840:three_prime_UTR |
| TTATTGTTACTATGCTGACA+TGG | 0.607345 | 7_1:+14174603 | None:intergenic |
| AGCCATGTATTATATCATGC+GGG | 0.612588 | 7_1:-14171225 | Msa1010840:three_prime_UTR |
| AAAGAGCATAGGACTTCACT+AGG | 0.619151 | 7_1:-14174470 | Msa1010840:CDS |
| TAGCCATGTATTATATCATG+CGG | 0.623965 | 7_1:-14171226 | Msa1010840:three_prime_UTR |
| TTCCAATTGCAAGGAAACCA+GGG | 0.625556 | 7_1:+14174873 | None:intergenic |
| CACACCTCAGTGTTAAGCAA+GGG | 0.630023 | 7_1:-14171192 | Msa1010840:three_prime_UTR |
| CCACACCTCAGTGTTAAGCA+AGG | 0.630799 | 7_1:-14171193 | Msa1010840:three_prime_UTR |
| AATTTGATAAAAGAAATGAA+AGG | 0.633612 | 7_1:-14174385 | Msa1010840:CDS |
| AATGATGGAGGTCCCAACAA+AGG | 0.636070 | 7_1:-14172589 | Msa1010840:CDS |
| AGCACCCTGATGTAATAGCA+GGG | 0.641359 | 7_1:-14171028 | Msa1010840:three_prime_UTR |
| CCTTGCTTAACACTGAGGTG+TGG | 0.650059 | 7_1:+14171193 | None:intergenic |
| GTCATCTGATCACAACTGAA+CGG | 0.652897 | 7_1:+14171064 | None:intergenic |
| AATCTTCTTCTGGATGCACA+AGG | 0.662162 | 7_1:+14172563 | None:intergenic |
| GTGTTGGTAAGAAAGAGCAT+AGG | 0.662195 | 7_1:-14174481 | Msa1010840:CDS |
| GATTCCCTGCTATTACATCA+GGG | 0.675874 | 7_1:+14171024 | None:intergenic |
| AGTATGTACTACGAAATGGA+AGG | 0.711602 | 7_1:-14171339 | Msa1010840:three_prime_UTR |
| TGGTCCCTTGCTTAACACTG+AGG | 0.734741 | 7_1:+14171188 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATATTTTAATTATTTT+TGG | - | chr7_1:14174007-14174026 | Msa1010840:intron | 0.0% |
| !!! | TTTTTACTATTTTATTTTGA+TGG | + | chr7_1:14171487-14171506 | None:intergenic | 10.0% |
| !!! | TTTTTTCAAATTTTCTAAAT+TGG | + | chr7_1:14173711-14173730 | None:intergenic | 10.0% |
| !!! | TATTTTAATTATTTTTGGTT+AGG | - | chr7_1:14174012-14174031 | Msa1010840:intron | 10.0% |
| !! | TAAATAATTAATGTGATTTA+AGG | - | chr7_1:14174209-14174228 | Msa1010840:intron | 10.0% |
| !!! | AATTATAGTTTATAACATTT+TGG | - | chr7_1:14174332-14174351 | Msa1010840:CDS | 10.0% |
| !!! | ATTATAGTTTATAACATTTT+GGG | - | chr7_1:14174333-14174352 | Msa1010840:CDS | 10.0% |
| !! | AATATACTACAAAATATATA+TGG | + | chr7_1:14174771-14174790 | None:intergenic | 10.0% |
| !!! | AGAAGATAATTTTATATGAT+TGG | + | chr7_1:14171038-14171057 | None:intergenic | 15.0% |
| !! | ATTAAACTTAAAAGTTATAG+TGG | + | chr7_1:14171909-14171928 | None:intergenic | 15.0% |
| !! | AAAAAAGTTAATCATATTTG+AGG | + | chr7_1:14172029-14172048 | None:intergenic | 15.0% |
| !! | AATTTGATAAAAGAAATGAA+AGG | - | chr7_1:14172862-14172881 | Msa1010840:intron | 15.0% |
| !! | ATTTGATAAAAGAAATGAAA+GGG | - | chr7_1:14172863-14172882 | Msa1010840:intron | 15.0% |
| !!! | TTTTTTCTTCTAAATTATGA+TGG | - | chr7_1:14173166-14173185 | Msa1010840:intron | 15.0% |
| !!! | AATTTTCAATTTTTTTTTGG+TGG | + | chr7_1:14173430-14173449 | None:intergenic | 15.0% |
| !!! | TAATTTTTGTTGTTAGAATA+GGG | - | chr7_1:14173505-14173524 | Msa1010840:intron | 15.0% |
| !! | AATATATACTATAAGAAAAG+TGG | - | chr7_1:14173596-14173615 | Msa1010840:intron | 15.0% |
| !! | TTAGAAAATTTGAAAAAAGT+AGG | - | chr7_1:14173713-14173732 | Msa1010840:intron | 15.0% |
| !! | TAGAAAATTTGAAAAAAGTA+GGG | - | chr7_1:14173714-14173733 | Msa1010840:intron | 15.0% |
| !!! | TTTTGAATTTGAAATATGAT+TGG | - | chr7_1:14173908-14173927 | Msa1010840:intron | 15.0% |
| !! | ATAAATTACCATATCATATA+AGG | + | chr7_1:14174161-14174180 | None:intergenic | 15.0% |
| !!! | TTATAGTTTATAACATTTTG+GGG | - | chr7_1:14174334-14174353 | Msa1010840:CDS | 15.0% |
| !!! | AATTTTTTCATAAACAAAGA+AGG | + | chr7_1:14174416-14174435 | None:intergenic | 15.0% |
| !!! | ATGATTATAAATTTTGGATT+TGG | - | chr7_1:14174529-14174548 | Msa1010840:CDS | 15.0% |
| !!! | TGTACATTATAATTATTTTC+AGG | + | chr7_1:14174801-14174820 | None:intergenic | 15.0% |
| !! | AAAAATGAATATTGAATATG+TGG | + | chr7_1:14175093-14175112 | None:intergenic | 15.0% |
| !!! | GAAAATAAGCAATTTTAAAA+GGG | + | chr7_1:14175297-14175316 | None:intergenic | 15.0% |
| !!! | AGAAAATAAGCAATTTTAAA+AGG | + | chr7_1:14175298-14175317 | None:intergenic | 15.0% |
| !!! | ATCAATTTTAAAAGAAAGAA+GGG | - | chr7_1:14175495-14175514 | Msa1010840:intron | 15.0% |
| !! | CTTTATCATCAATATTATTA+TGG | + | chr7_1:14175939-14175958 | None:intergenic | 15.0% |
| !!! | CATAATAATATTGATGATAA+AGG | - | chr7_1:14175937-14175956 | Msa1010840:intron | 15.0% |
| !!! | TTTTGTTTTCGTAAGTTATT+TGG | - | chr7_1:14171328-14171347 | Msa1010840:three_prime_UTR | 20.0% |
| !! | GAACTTATGAAAAAAACTTA+CGG | + | chr7_1:14171394-14171413 | None:intergenic | 20.0% |
| !! | AATAATGAATTTACCAATCA+TGG | - | chr7_1:14171523-14171542 | Msa1010840:CDS | 20.0% |
| !! | TTAAAATTTGCCATGTTTAA+AGG | - | chr7_1:14172002-14172021 | Msa1010840:intron | 20.0% |
| !!! | TTAACTTTTTTCGTTGTTTA+AGG | - | chr7_1:14172038-14172057 | Msa1010840:intron | 20.0% |
| !! | AATTTGTATCACAATATGTT+TGG | - | chr7_1:14173293-14173312 | Msa1010840:intron | 20.0% |
| !! | AATATGTTTGGAAAATGTTT+GGG | - | chr7_1:14173305-14173324 | Msa1010840:intron | 20.0% |
| !! | GCATAAAATAAAAATATGCA+AGG | - | chr7_1:14173382-14173401 | Msa1010840:intron | 20.0% |
| !!! | GTAATTTTTGTTGTTAGAAT+AGG | - | chr7_1:14173504-14173523 | Msa1010840:intron | 20.0% |
| !!! | AAATTAATATTTTGAGAAGC+TGG | - | chr7_1:14173650-14173669 | Msa1010840:intron | 20.0% |
| !! | AGAAAATTTGAAAAAAGTAG+GGG | - | chr7_1:14173715-14173734 | Msa1010840:intron | 20.0% |
| !!! | TAAGGATAATTTGAAATTCA+CGG | - | chr7_1:14173819-14173838 | Msa1010840:intron | 20.0% |
| !! | ATACTTACAATATTATAGCT+CGG | - | chr7_1:14173880-14173899 | Msa1010840:intron | 20.0% |
| !!! | TATAGTTTATAACATTTTGG+GGG | - | chr7_1:14174335-14174354 | Msa1010840:CDS | 20.0% |
| !! | AATATGCGAAAAAATAATGT+AGG | - | chr7_1:14174372-14174391 | Msa1010840:CDS | 20.0% |
| !!! | CTGTTCATGATTATAAATTT+TGG | - | chr7_1:14174523-14174542 | Msa1010840:CDS | 20.0% |
| !!! | ATTTTTCAAAGTTATCAATG+AGG | + | chr7_1:14174963-14174982 | None:intergenic | 20.0% |
| !!! | TTTTAAACTCGACTTTTTAT+TGG | + | chr7_1:14175173-14175192 | None:intergenic | 20.0% |
| !! | ACTCTTAATGTCATATTATT+AGG | - | chr7_1:14175257-14175276 | Msa1010840:intron | 20.0% |
| !!! | GATCAATTTTAAAAGAAAGA+AGG | - | chr7_1:14175494-14175513 | Msa1010840:intron | 20.0% |
| !! | ATCAGTTGTAAATTATCAAT+TGG | + | chr7_1:14175579-14175598 | None:intergenic | 20.0% |
| !! | GAACAAACAAATACATATAT+AGG | + | chr7_1:14175672-14175691 | None:intergenic | 20.0% |
| !!! | ATAAAGCATAATTGATTTAG+AGG | - | chr7_1:14175984-14176003 | Msa1010840:intron | 20.0% |
| !! | TTGTGATGAAAAATGATATT+TGG | - | chr7_1:14176281-14176300 | Msa1010840:exon | 20.0% |
| !!! | AATGATATTTGGAAAACTTT+TGG | - | chr7_1:14176292-14176311 | Msa1010840:five_prime_UTR | 20.0% |
| !!! | ATGATATTTGGAAAACTTTT+GGG | - | chr7_1:14176293-14176312 | Msa1010840:five_prime_UTR | 20.0% |
| ! | TCTTGAATATCAAAAGATGA+CGG | - | chr7_1:14170969-14170988 | Msa1010840:three_prime_UTR | 25.0% |
| !!! | AATTTTTTGTTGCAGTTACT+TGG | - | chr7_1:14171076-14171095 | Msa1010840:three_prime_UTR | 25.0% |
| ! | TTAAATAGTCAATGCATGTT+AGG | + | chr7_1:14171214-14171233 | None:intergenic | 25.0% |
| !!! | TATTATAGTTTAGTTCTCCT+TGG | + | chr7_1:14171576-14171595 | None:intergenic | 25.0% |
| !! | TTTATTCAATGGTTGTTGTT+AGG | + | chr7_1:14171647-14171666 | None:intergenic | 25.0% |
| ! | TAGCACATAACTTTATTCAA+TGG | + | chr7_1:14171658-14171677 | None:intergenic | 25.0% |
| !! | AATCTTTTGTACCAATCAAT+AGG | - | chr7_1:14171731-14171750 | Msa1010840:intron | 25.0% |
| ! | ATTACTCTTGTCTAATTAAG+AGG | - | chr7_1:14171796-14171815 | Msa1010840:intron | 25.0% |
| ! | CTTATAGTCAAGATATGAAT+AGG | + | chr7_1:14171947-14171966 | None:intergenic | 25.0% |
| !!! | ATGTTTAGACTCACTTTTAA+GGG | - | chr7_1:14171970-14171989 | Msa1010840:intron | 25.0% |
| ! | TTTCGTTAAAAGAGAGTTTA+AGG | + | chr7_1:14172119-14172138 | None:intergenic | 25.0% |
| ! | TATCATCAAAAACCAAATCT+TGG | - | chr7_1:14172213-14172232 | Msa1010840:intron | 25.0% |
| !!! | ACTTTTTCAGAGAAGTAAAT+TGG | - | chr7_1:14172803-14172822 | Msa1010840:intron | 25.0% |
| !! | GAAATATTCTGCTTTGAATA+TGG | - | chr7_1:14172893-14172912 | Msa1010840:intron | 25.0% |
| ! | TATCAAACATGCATCTATTT+CGG | + | chr7_1:14173090-14173109 | None:intergenic | 25.0% |
| ! | CAATATGTTTGGAAAATGTT+TGG | - | chr7_1:14173304-14173323 | Msa1010840:intron | 25.0% |
| ! | AAATAAAAATATGCAAGGTC+CGG | - | chr7_1:14173387-14173406 | Msa1010840:intron | 25.0% |
| !!! | TTTCAATTTTTTTTTGGTGG+TGG | + | chr7_1:14173427-14173446 | None:intergenic | 25.0% |
| ! | TCATGTTAAATATCAAAAGC+GGG | + | chr7_1:14174274-14174293 | None:intergenic | 25.0% |
| ! | CTCATGTTAAATATCAAAAG+CGG | + | chr7_1:14174275-14174294 | None:intergenic | 25.0% |
| !! | ATAGTTTATAACATTTTGGG+GGG | - | chr7_1:14174336-14174355 | Msa1010840:CDS | 25.0% |
| ! | AAGAAGAAAAACATGAATGA+TGG | - | chr7_1:14174643-14174662 | Msa1010840:CDS | 25.0% |
| !! | TCTTTTTGTGATATAGTGAA+AGG | + | chr7_1:14174882-14174901 | None:intergenic | 25.0% |
| ! | TAGAAGAAAAGAATCACTAA+TGG | - | chr7_1:14174926-14174945 | Msa1010840:CDS | 25.0% |
| ! | ACATTACACATTACTAATAG+AGG | + | chr7_1:14175779-14175798 | None:intergenic | 25.0% |
| ! | GTGTTTGTACTTATATATTG+TGG | - | chr7_1:14175800-14175819 | Msa1010840:intron | 25.0% |
| !! | GTTGATAAATGGAATAATTG+AGG | - | chr7_1:14175860-14175879 | Msa1010840:intron | 25.0% |
| !!! | GATTGGTTTTGATTCTGAAA+AGG | + | chr7_1:14171021-14171040 | None:intergenic | 30.0% |
| TACAGAACCATTCAAAGATT+TGG | - | chr7_1:14171132-14171151 | Msa1010840:three_prime_UTR | 30.0% | |
| ! | CTTTGTTTGAATTGCGTTAT+TGG | + | chr7_1:14171455-14171474 | None:intergenic | 30.0% |
| !!! | TTTTATTTTGATGGCCATCA+AGG | + | chr7_1:14171478-14171497 | None:intergenic | 30.0% |
| GTTAGGTAAATTGTCTTCTT+GGG | + | chr7_1:14171630-14171649 | None:intergenic | 30.0% | |
| TGTTAGGTAAATTGTCTTCT+TGG | + | chr7_1:14171631-14171650 | None:intergenic | 30.0% | |
| ! | CTTTTCAACATGGTTTCAAA+CGG | - | chr7_1:14171883-14171902 | Msa1010840:intron | 30.0% |
| !! | CATGTTTAGACTCACTTTTA+AGG | - | chr7_1:14171969-14171988 | Msa1010840:intron | 30.0% |
| TATTTGAGGACCTTTAAACA+TGG | + | chr7_1:14172015-14172034 | None:intergenic | 30.0% | |
| AATTCTTGCAATTGTCTATC+AGG | - | chr7_1:14172162-14172181 | Msa1010840:intron | 30.0% | |
| ATTCTTGCAATTGTCTATCA+GGG | - | chr7_1:14172163-14172182 | Msa1010840:intron | 30.0% | |
| ! | TTTTGTTCTTCATCAAGTGA+TGG | + | chr7_1:14172192-14172211 | None:intergenic | 30.0% |
| TTGAATCTGATTCCAAGATT+TGG | + | chr7_1:14172228-14172247 | None:intergenic | 30.0% | |
| !!! | GATTTTCTGAAGTTGTTTTG+AGG | + | chr7_1:14172267-14172286 | None:intergenic | 30.0% |
| AACTTCAGAAAATCATTTGC+TGG | - | chr7_1:14172273-14172292 | Msa1010840:intron | 30.0% | |
| GAAGAACATGAAGAAGAATA+TGG | - | chr7_1:14172312-14172331 | Msa1010840:intron | 30.0% | |
| TGAACTGAGATTTGAAAAGA+TGG | + | chr7_1:14172441-14172460 | None:intergenic | 30.0% | |
| ! | TTCGTTTTCATTTTCGGTTA+TGG | + | chr7_1:14172466-14172485 | None:intergenic | 30.0% |
| ! | TTCGTCTTCGTTTTCATTTT+CGG | + | chr7_1:14172472-14172491 | None:intergenic | 30.0% |
| TTATTGTTACTATGCTGACA+TGG | + | chr7_1:14172647-14172666 | None:intergenic | 30.0% | |
| ATAAGTGGAAAACCAATTGA+AGG | - | chr7_1:14172663-14172682 | Msa1010840:CDS | 30.0% | |
| CCAAACAAATAACCTTGTAA+AGG | + | chr7_1:14172711-14172730 | None:intergenic | 30.0% | |
| CCTTTACAAGGTTATTTGTT+TGG | - | chr7_1:14172708-14172727 | Msa1010840:intron | 30.0% | |
| AAAAATTCTTCATCTGCGAA+TGG | - | chr7_1:14172957-14172976 | Msa1010840:intron | 30.0% | |
| AATAAAAATATGCAAGGTCC+GGG | - | chr7_1:14173388-14173407 | Msa1010840:intron | 30.0% | |
| !! | TTAATATTTTGAGAAGCTGG+AGG | - | chr7_1:14173653-14173672 | Msa1010840:intron | 30.0% |
| ! | TCTGAAAGCCTTATATGATA+TGG | - | chr7_1:14174150-14174169 | Msa1010840:intron | 30.0% |
| AAAATAGGGATGAGTTTACA+GGG | + | chr7_1:14174476-14174495 | None:intergenic | 30.0% | |
| AAAAATAGGGATGAGTTTAC+AGG | + | chr7_1:14174477-14174496 | None:intergenic | 30.0% | |
| ATCTACCCAGACTAAAAATA+GGG | + | chr7_1:14174490-14174509 | None:intergenic | 30.0% | |
| TATCTACCCAGACTAAAAAT+AGG | + | chr7_1:14174491-14174510 | None:intergenic | 30.0% | |
| ! | TTTTAGTCTGGGTAGATAAA+TGG | - | chr7_1:14174493-14174512 | Msa1010840:CDS | 30.0% |
| !!! | TTTCTGGATGAACTTTTTTC+CGG | + | chr7_1:14174576-14174595 | None:intergenic | 30.0% |
| AAGAAAAACATGAATGATGG+AGG | - | chr7_1:14174646-14174665 | Msa1010840:CDS | 30.0% | |
| ! | TTTTGTGATATAGTGAAAGG+AGG | + | chr7_1:14174879-14174898 | None:intergenic | 30.0% |
| ATGTTTCATCTCATTGAGAT+AGG | + | chr7_1:14175213-14175232 | None:intergenic | 30.0% | |
| !! | TGCTTATTTTCTTGATCCAA+CGG | - | chr7_1:14175306-14175325 | Msa1010840:intron | 30.0% |
| !!! | AACTCACGTACTTTTAAGAT+TGG | - | chr7_1:14175365-14175384 | Msa1010840:intron | 30.0% |
| !! | GTTTAATCACCTTTTAAGTC+GGG | + | chr7_1:14175395-14175414 | None:intergenic | 30.0% |
| !! | GGTTTAATCACCTTTTAAGT+CGG | + | chr7_1:14175396-14175415 | None:intergenic | 30.0% |
| !! | CATGCTGACACTTTTTAAAT+CGG | + | chr7_1:14175417-14175436 | None:intergenic | 30.0% |
| !! | TTACTTTCGGAATTTTTCAG+CGG | + | chr7_1:14175449-14175468 | None:intergenic | 30.0% |
| AGAAGGGATATACTTATCAA+TGG | + | chr7_1:14175542-14175561 | None:intergenic | 30.0% | |
| ! | AAGTATATCCCTTCTTTTGT+TGG | - | chr7_1:14175547-14175566 | Msa1010840:intron | 30.0% |
| !! | TTTAGTTCTAGAGCTTTGAA+TGG | - | chr7_1:14175721-14175740 | Msa1010840:intron | 30.0% |
| TTGAATGGCAAAGAAGAAAT+TGG | - | chr7_1:14175736-14175755 | Msa1010840:intron | 30.0% | |
| TGAATGGCAAAGAAGAAATT+GGG | - | chr7_1:14175737-14175756 | Msa1010840:intron | 30.0% | |
| TGTTTGTGACAAATACAGTT+TGG | - | chr7_1:14175837-14175856 | Msa1010840:intron | 30.0% | |
| GTTTGTGACAAATACAGTTT+GGG | - | chr7_1:14175838-14175857 | Msa1010840:intron | 30.0% | |
| !! | ATACAGTTTGGGTTGATAAA+TGG | - | chr7_1:14175849-14175868 | Msa1010840:intron | 30.0% |
| ATTTCGTAGTACATACTATG+AGG | + | chr7_1:14175905-14175924 | None:intergenic | 30.0% | |
| TCATAGTATGTACTACGAAA+TGG | - | chr7_1:14175904-14175923 | Msa1010840:intron | 30.0% | |
| TAGCCATGTATTATATCATG+CGG | - | chr7_1:14176021-14176040 | Msa1010840:intron | 30.0% | |
| ! | AATTTTATAGCAGCAAAACC+TGG | + | chr7_1:14176082-14176101 | None:intergenic | 30.0% |
| ACATACTTGCTTAACAAAAC+AGG | + | chr7_1:14176248-14176267 | None:intergenic | 30.0% | |
| CCAATGACCAAATCTTTGAA+TGG | + | chr7_1:14171142-14171161 | None:intergenic | 35.0% | |
| ! | CCATTCAAAGATTTGGTCAT+TGG | - | chr7_1:14171139-14171158 | Msa1010840:three_prime_UTR | 35.0% |
| CAATTCAAACAAAGCCTTGA+TGG | - | chr7_1:14171461-14171480 | Msa1010840:exon | 35.0% | |
| ACCAATCATGGATGAGTAAT+TGG | - | chr7_1:14171535-14171554 | Msa1010840:intron | 35.0% | |
| TCCAATTACTCATCCATGAT+TGG | + | chr7_1:14171539-14171558 | None:intergenic | 35.0% | |
| ! | TCCAAAGCAACAATTTTGAG+CGG | - | chr7_1:14171837-14171856 | Msa1010840:intron | 35.0% |
| ! | CGTTTGAAACCATGTTGAAA+AGG | + | chr7_1:14171885-14171904 | None:intergenic | 35.0% |
| !! | TAGACTCACTTTTAAGGGAA+CGG | - | chr7_1:14171975-14171994 | Msa1010840:intron | 35.0% |
| ! | TCGTTGTTTAAGGCAATCTT+TGG | - | chr7_1:14172048-14172067 | Msa1010840:intron | 35.0% |
| ! | AATCAATTTTTCTCTGTCGC+AGG | - | chr7_1:14172138-14172157 | Msa1010840:intron | 35.0% |
| ATGGATTCGATGAAATTGGT+TGG | + | chr7_1:14172413-14172432 | None:intergenic | 35.0% | |
| ! | ATTTGAAAAGATGGTGTCGA+TGG | + | chr7_1:14172432-14172451 | None:intergenic | 35.0% |
| GATGAGTTAGAGAAAGTTCT+TGG | - | chr7_1:14172522-14172541 | Msa1010840:CDS | 35.0% | |
| GTCAGCATAGTAACAATAAG+TGG | - | chr7_1:14172648-14172667 | Msa1010840:CDS | 35.0% | |
| TTTGTGTCTGTTCCTTCAAT+TGG | + | chr7_1:14172678-14172697 | None:intergenic | 35.0% | |
| ! | AATGCTGTTTGTCCTTTACA+AGG | - | chr7_1:14172696-14172715 | Msa1010840:intron | 35.0% |
| ! | TTGGCTGATGAGATTTCTTT+TGG | - | chr7_1:14172822-14172841 | Msa1010840:intron | 35.0% |
| AGCTGAGAGTAAACTCAATA+AGG | - | chr7_1:14173001-14173020 | Msa1010840:intron | 35.0% | |
| TAGATGCATGTTTGATATCG+TGG | - | chr7_1:14173093-14173112 | Msa1010840:intron | 35.0% | |
| ATAAAAATATGCAAGGTCCG+GGG | - | chr7_1:14173389-14173408 | Msa1010840:intron | 35.0% | |
| !!! | AATTTTTTTTTGGTGGTGGC+CGG | + | chr7_1:14173423-14173442 | None:intergenic | 35.0% |
| GTTAGGAGTGAGAATAAGTT+AGG | - | chr7_1:14174029-14174048 | Msa1010840:intron | 35.0% | |
| ATAGATCGCATGTCAGATTT+AGG | + | chr7_1:14174105-14174124 | None:intergenic | 35.0% | |
| TCTGACATGCGATCTATTAT+AGG | - | chr7_1:14174108-14174127 | Msa1010840:intron | 35.0% | |
| TCATATAAGGCTTTCAGACT+CGG | + | chr7_1:14174148-14174167 | None:intergenic | 35.0% | |
| AAATAGGGATGAGTTTACAG+GGG | + | chr7_1:14174475-14174494 | None:intergenic | 35.0% | |
| !!! | ACTCATCCCTATTTTTAGTC+TGG | - | chr7_1:14174481-14174500 | Msa1010840:CDS | 35.0% |
| !!! | CTCATCCCTATTTTTAGTCT+GGG | - | chr7_1:14174482-14174501 | Msa1010840:CDS | 35.0% |
| TCTAGATTCTCCATATGTTC+CGG | - | chr7_1:14174554-14174573 | Msa1010840:CDS | 35.0% | |
| !!! | GAACTTTTTTCCGGAACATA+TGG | + | chr7_1:14174567-14174586 | None:intergenic | 35.0% |
| CAAGAAGATGAATCTTCTTC+TGG | + | chr7_1:14174697-14174716 | None:intergenic | 35.0% | |
| AAGAAGATTCATCTTCTTGC+AGG | - | chr7_1:14174698-14174717 | Msa1010840:CDS | 35.0% | |
| AGAAGATTCATCTTCTTGCA+GGG | - | chr7_1:14174699-14174718 | Msa1010840:CDS | 35.0% | |
| GGCTTTCTCATTATTGTTGT+AGG | + | chr7_1:14174843-14174862 | None:intergenic | 35.0% | |
| CATGAGCTCATCAATTTATG+TGG | + | chr7_1:14175140-14175159 | None:intergenic | 35.0% | |
| !! | GCTTATTTTCTTGATCCAAC+GGG | - | chr7_1:14175307-14175326 | Msa1010840:intron | 35.0% |
| TCCGAAAGTAAGTTAACTTC+CGG | - | chr7_1:14175458-14175477 | Msa1010840:intron | 35.0% | |
| ACCGGAAGTTAACTTACTTT+CGG | + | chr7_1:14175462-14175481 | None:intergenic | 35.0% | |
| GGCTATATCCAACAAAAGAA+GGG | + | chr7_1:14175558-14175577 | None:intergenic | 35.0% | |
| TGGCTATATCCAACAAAAGA+AGG | + | chr7_1:14175559-14175578 | None:intergenic | 35.0% | |
| !! | TTCTTGTATATGCCACTTTG+AGG | - | chr7_1:14175601-14175620 | Msa1010840:intron | 35.0% |
| AGTATGTACTACGAAATGGA+AGG | - | chr7_1:14175908-14175927 | Msa1010840:intron | 35.0% | |
| AATACATGGCTACATCTACA+TGG | + | chr7_1:14176013-14176032 | None:intergenic | 35.0% | |
| AGCCATGTATTATATCATGC+GGG | - | chr7_1:14176022-14176041 | Msa1010840:intron | 35.0% | |
| ! | TTTTGTTGCAGTTACTTGGC+TGG | - | chr7_1:14171080-14171099 | Msa1010840:three_prime_UTR | 40.0% |
| GTAGCTTGAAAACAGCATGT+TGG | + | chr7_1:14171169-14171188 | None:intergenic | 40.0% | |
| ! | GGAACAAAAGTATGTAGCCA+AGG | - | chr7_1:14171556-14171575 | Msa1010840:intron | 40.0% |
| ATGTTGCGTCTCCTATTGAT+TGG | + | chr7_1:14171745-14171764 | None:intergenic | 40.0% | |
| ! | GCTTTGGACAACATTTGAAG+AGG | + | chr7_1:14171825-14171844 | None:intergenic | 40.0% |
| ! | CCAAAGCAACAATTTTGAGC+GGG | - | chr7_1:14171838-14171857 | Msa1010840:intron | 40.0% |
| ! | CAAAGCAACAATTTTGAGCG+GGG | - | chr7_1:14171839-14171858 | Msa1010840:intron | 40.0% |
| TTCCAATTGCAAGGAAACCA+GGG | + | chr7_1:14172377-14172396 | None:intergenic | 40.0% | |
| TTCCTTGCAATTGGAACACT+TGG | - | chr7_1:14172381-14172400 | Msa1010840:intron | 40.0% | |
| ATCCAAGTGTTCCAATTGCA+AGG | + | chr7_1:14172386-14172405 | None:intergenic | 40.0% | |
| ! | GTCGATGGATTCGATGAAAT+TGG | + | chr7_1:14172417-14172436 | None:intergenic | 40.0% |
| !! | TATTTCTTCCAGTGCTGACA+TGG | + | chr7_1:14172623-14172642 | None:intergenic | 40.0% |
| GAAACAGCAGTTACTAGTGT+TGG | - | chr7_1:14172750-14172769 | Msa1010840:intron | 40.0% | |
| ! | GTGTTGGTAAGAAAGAGCAT+AGG | - | chr7_1:14172766-14172785 | Msa1010840:intron | 40.0% |
| ! | AAAGAGCATAGGACTTCACT+AGG | - | chr7_1:14172777-14172796 | Msa1010840:intron | 40.0% |
| ! | TGAGTTTAGCTCAGTTGGTA+AGG | - | chr7_1:14173354-14173373 | Msa1010840:intron | 40.0% |
| !!! | ATTTTTTTTTGGTGGTGGCC+GGG | + | chr7_1:14173422-14173441 | None:intergenic | 40.0% |
| CATCCAGAAAGTTCAACAGT+TGG | - | chr7_1:14174586-14174605 | Msa1010840:CDS | 40.0% | |
| TGTCCAACTGTTGAACTTTC+TGG | + | chr7_1:14174592-14174611 | None:intergenic | 40.0% | |
| TCAACAGTTGGACACAAATC+TGG | - | chr7_1:14174598-14174617 | Msa1010840:CDS | 40.0% | |
| AATCTTCTTCTGGATGCACA+AGG | + | chr7_1:14174687-14174706 | None:intergenic | 40.0% | |
| AAAGGAGGAGGATACAAGTA+GGG | + | chr7_1:14174864-14174883 | None:intergenic | 40.0% | |
| TGTGATATAGTGAAAGGAGG+AGG | + | chr7_1:14174876-14174895 | None:intergenic | 40.0% | |
| ATTGGTTGACCCGACTTAAA+AGG | - | chr7_1:14175383-14175402 | Msa1010840:intron | 40.0% | |
| GAAAGTAAGTTAACTTCCGG+TGG | - | chr7_1:14175461-14175480 | Msa1010840:intron | 40.0% | |
| AAGTTAACTTCCGGTGGATA+AGG | - | chr7_1:14175467-14175486 | Msa1010840:intron | 40.0% | |
| AGTTAACTTCCGGTGGATAA+GGG | - | chr7_1:14175468-14175487 | Msa1010840:intron | 40.0% | |
| TTGATCATTCCCTTATCCAC+CGG | + | chr7_1:14175480-14175499 | None:intergenic | 40.0% | |
| GGCAAGGTGTAACAGAATAT+GGG | + | chr7_1:14175633-14175652 | None:intergenic | 40.0% | |
| AGGCAAGGTGTAACAGAATA+TGG | + | chr7_1:14175634-14175653 | None:intergenic | 40.0% | |
| ATAGGCGTGCTAAAAGTAGT+AGG | + | chr7_1:14175654-14175673 | None:intergenic | 40.0% | |
| ACATACTATGAGGCAGACAT+TGG | + | chr7_1:14175895-14175914 | None:intergenic | 40.0% | |
| TGCCCGCATGATATAATACA+TGG | + | chr7_1:14176027-14176046 | None:intergenic | 40.0% | |
| GTCATCTGATCACAACTGAA+CGG | + | chr7_1:14176186-14176205 | None:intergenic | 40.0% | |
| GATTCCCTGCTATTACATCA+GGG | + | chr7_1:14176226-14176245 | None:intergenic | 40.0% | |
| AGTTACTTGGCTGGATGCAT+AGG | - | chr7_1:14171089-14171108 | Msa1010840:three_prime_UTR | 45.0% | |
| ! | CCCGCTCAAAATTGTTGCTT+TGG | + | chr7_1:14171841-14171860 | None:intergenic | 45.0% |
| GGGGCGATAATCATTGTTAG+CGG | - | chr7_1:14171858-14171877 | Msa1010840:intron | 45.0% | |
| !! | GTTAGCGGACCTTTTCAACA+TGG | - | chr7_1:14171873-14171892 | Msa1010840:intron | 45.0% |
| GCTATGTTTGATCTCTTCCC+TGG | - | chr7_1:14172357-14172376 | Msa1010840:intron | 45.0% | |
| TTCCCTGGTTTCCTTGCAAT+TGG | - | chr7_1:14172372-14172391 | Msa1010840:intron | 45.0% | |
| GTTCCAATTGCAAGGAAACC+AGG | + | chr7_1:14172378-14172397 | None:intergenic | 45.0% | |
| !! | TACTTCTTCCAGTGCTGACA+TGG | + | chr7_1:14172599-14172618 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTGGTGGTGGCCG+GGG | + | chr7_1:14173421-14173440 | None:intergenic | 45.0% |
| ! | AATGATGGAGGTCCCAACAA+AGG | - | chr7_1:14174658-14174677 | Msa1010840:CDS | 45.0% |
| TGCACAAGGTAGCCTTTGTT+GGG | + | chr7_1:14174673-14174692 | None:intergenic | 45.0% | |
| ATGCACAAGGTAGCCTTTGT+TGG | + | chr7_1:14174674-14174693 | None:intergenic | 45.0% | |
| GAAAGGAGGAGGATACAAGT+AGG | + | chr7_1:14174865-14174884 | None:intergenic | 45.0% | |
| !! | TCACGCTCGACATTTTTCAG+TGG | - | chr7_1:14175337-14175356 | Msa1010840:intron | 45.0% |
| !! | TGTATATGCCACTTTGAGGC+TGG | - | chr7_1:14175605-14175624 | Msa1010840:intron | 45.0% |
| CGTGCTAAAAGTAGTAGGCA+AGG | + | chr7_1:14175649-14175668 | None:intergenic | 45.0% | |
| CACACCTCAGTGTTAAGCAA+GGG | - | chr7_1:14176055-14176074 | Msa1010840:intron | 45.0% | |
| AGCACCCTGATGTAATAGCA+GGG | - | chr7_1:14176219-14176238 | Msa1010840:intron | 45.0% | |
| GGATTCCCTGCTATTACATC+AGG | + | chr7_1:14176227-14176246 | None:intergenic | 45.0% | |
| !!! | TAAAATTTTCAATTTTTTTT+TGG | + | chr7_1:14173433-14173452 | None:intergenic | 5.0% |
| !!! | TATATAAATTTTAAAAGTTT+TGG | - | chr7_1:14173561-14173580 | Msa1010840:intron | 5.0% |
| !!! | AAATTATCAATTTTTTTTTA+GGG | + | chr7_1:14173797-14173816 | None:intergenic | 5.0% |
| !!! | AAAATTATCAATTTTTTTTT+AGG | + | chr7_1:14173798-14173817 | None:intergenic | 5.0% |
| !!! | AAAAAATTGATAATTTTATA+AGG | - | chr7_1:14173801-14173820 | Msa1010840:intron | 5.0% |
| !!! | ATATTATATTATATTTTATG+AGG | + | chr7_1:14173995-14174014 | None:intergenic | 5.0% |
| AGAAACAGCCATGTCAGCAC+TGG | - | chr7_1:14172588-14172607 | Msa1010840:CDS | 50.0% | |
| AGAAGTAGCCATGTCAGCAC+TGG | - | chr7_1:14172612-14172631 | Msa1010840:CDS | 50.0% | |
| CCAACTGAGCTAAACTCACG+AGG | + | chr7_1:14173352-14173371 | None:intergenic | 50.0% | |
| ! | CCTCGTGAGTTTAGCTCAGT+TGG | - | chr7_1:14173349-14173368 | Msa1010840:intron | 50.0% |
| AGCTACGACAGGTCAAGACA+GGG | + | chr7_1:14174441-14174460 | None:intergenic | 50.0% | |
| TAGCTACGACAGGTCAAGAC+AGG | + | chr7_1:14174442-14174461 | None:intergenic | 50.0% | |
| CCTGTCGTAGCTAACGTTGT+CGG | - | chr7_1:14174449-14174468 | Msa1010840:CDS | 50.0% | |
| ! | CATCTTCTTGCAGGGAGCAT+TGG | - | chr7_1:14174707-14174726 | Msa1010840:CDS | 50.0% |
| CCTTGCTTAACACTGAGGTG+TGG | + | chr7_1:14176057-14176076 | None:intergenic | 50.0% | |
| CCACACCTCAGTGTTAAGCA+AGG | - | chr7_1:14176054-14176073 | Msa1010840:intron | 50.0% | |
| TGGTCCCTTGCTTAACACTG+AGG | + | chr7_1:14176062-14176081 | None:intergenic | 50.0% | |
| TCAGTGTTAAGCAAGGGACC+AGG | - | chr7_1:14176061-14176080 | Msa1010840:intron | 50.0% | |
| CAGCACCCTGATGTAATAGC+AGG | - | chr7_1:14176218-14176237 | Msa1010840:intron | 50.0% | |
| CCGACAACGTTAGCTACGAC+AGG | + | chr7_1:14174452-14174471 | None:intergenic | 55.0% | |
| GAGCGTGAGTTAACTCCCGT+TGG | + | chr7_1:14175325-14175344 | None:intergenic | 55.0% | |
| TATGGGCTCCAGCCTCAAAG+TGG | + | chr7_1:14175616-14175635 | None:intergenic | 55.0% | |
| AAGGTCCGGGGTTCGAACCC+CGG | - | chr7_1:14173401-14173420 | Msa1010840:intron | 65.0% | |
| GGTGGCCGGGGTTCGAACCC+CGG | + | chr7_1:14173409-14173428 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 14170951 | 14176318 | 14170951 | ID=Msa1010840;Name=Msa1010840 |
| chr7_1 | mRNA | 14170951 | 14176318 | 14170951 | ID=Msa1010840-mRNA-1;Parent=Msa1010840;Name=Msa1010840-mRNA-1;_AED=0.03;_eAED=0.03;_QI=34|0.5|0.4|1|0.75|0.8|5|523|377 |
| chr7_1 | exon | 14170951 | 14171549 | 14170951 | ID=Msa1010840-mRNA-1:exon:3664;Parent=Msa1010840-mRNA-1 |
| chr7_1 | exon | 14172517 | 14172710 | 14172517 | ID=Msa1010840-mRNA-1:exon:3663;Parent=Msa1010840-mRNA-1 |
| chr7_1 | exon | 14174247 | 14175064 | 14174247 | ID=Msa1010840-mRNA-1:exon:3662;Parent=Msa1010840-mRNA-1 |
| chr7_1 | exon | 14176139 | 14176178 | 14176139 | ID=Msa1010840-mRNA-1:exon:3661;Parent=Msa1010840-mRNA-1 |
| chr7_1 | exon | 14176279 | 14176318 | 14176279 | ID=Msa1010840-mRNA-1:exon:3660;Parent=Msa1010840-mRNA-1 |
| chr7_1 | five_prime_UTR | 14176285 | 14176318 | 14176285 | ID=Msa1010840-mRNA-1:five_prime_utr;Parent=Msa1010840-mRNA-1 |
| chr7_1 | CDS | 14176279 | 14176284 | 14176279 | ID=Msa1010840-mRNA-1:cds;Parent=Msa1010840-mRNA-1 |
| chr7_1 | CDS | 14176139 | 14176178 | 14176139 | ID=Msa1010840-mRNA-1:cds;Parent=Msa1010840-mRNA-1 |
| chr7_1 | CDS | 14174247 | 14175064 | 14174247 | ID=Msa1010840-mRNA-1:cds;Parent=Msa1010840-mRNA-1 |
| chr7_1 | CDS | 14172517 | 14172710 | 14172517 | ID=Msa1010840-mRNA-1:cds;Parent=Msa1010840-mRNA-1 |
| chr7_1 | CDS | 14171474 | 14171549 | 14171474 | ID=Msa1010840-mRNA-1:cds;Parent=Msa1010840-mRNA-1 |
| chr7_1 | three_prime_UTR | 14170951 | 14171473 | 14170951 | ID=Msa1010840-mRNA-1:three_prime_utr;Parent=Msa1010840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
