Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0964840 | KEH27117.1 | 50.376 | 133 | 34 | 2 | 28 | 128 | 1 | 133 | 4.76e-31 | 120 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0964840 | A0A072UBW5 | 50.376 | 133 | 34 | 2 | 28 | 128 | 1 | 133 | 2.27e-31 | 120 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000190 | Msa0964840 | 0.804212 | 2.408055e-49 | -8.615850e-47 |
| Msa0011500 | Msa0964840 | 0.800768 | 1.234237e-48 | -8.615850e-47 |
| Msa0017510 | Msa0964840 | 0.839916 | 1.190076e-57 | -8.615850e-47 |
| Msa0024550 | Msa0964840 | 0.855708 | 5.260834e-62 | -8.615850e-47 |
| Msa0029880 | Msa0964840 | 0.819769 | 9.761447e-53 | -8.615850e-47 |
| Msa0029890 | Msa0964840 | 0.816384 | 5.685232e-52 | -8.615850e-47 |
| Msa0029910 | Msa0964840 | 0.800813 | 1.208730e-48 | -8.615850e-47 |
| Msa0055450 | Msa0964840 | 0.816166 | 6.360417e-52 | -8.615850e-47 |
| Msa0061340 | Msa0964840 | 0.807262 | 5.508701e-50 | -8.615850e-47 |
| Msa0076250 | Msa0964840 | 0.824819 | 6.562887e-54 | -8.615850e-47 |
| Msa0077120 | Msa0964840 | 0.803184 | 3.934010e-49 | -8.615850e-47 |
| Msa0077140 | Msa0964840 | 0.803207 | 3.891623e-49 | -8.615850e-47 |
| Msa0089630 | Msa0964840 | 0.801681 | 8.027777e-49 | -8.615850e-47 |
| Msa0116770 | Msa0964840 | 0.808207 | 3.469526e-50 | -8.615850e-47 |
| Msa0117140 | Msa0964840 | 0.805987 | 1.023602e-49 | -8.615850e-47 |
| Msa0120400 | Msa0964840 | 0.848595 | 5.546654e-60 | -8.615850e-47 |
| Msa0626510 | Msa0964840 | 0.834568 | 2.780254e-56 | -8.615850e-47 |
| Msa0641290 | Msa0964840 | 0.801687 | 8.003957e-49 | -8.615850e-47 |
| Msa0641360 | Msa0964840 | 0.833377 | 5.523532e-56 | -8.615850e-47 |
| Msa0657970 | Msa0964840 | 0.825933 | 3.577184e-54 | -8.615850e-47 |
| Msa0662240 | Msa0964840 | 0.841259 | 5.296346e-58 | -8.615850e-47 |
| Msa0669840 | Msa0964840 | 0.808069 | 3.711998e-50 | -8.615850e-47 |
| Msa0677410 | Msa0964840 | 0.801272 | 9.735455e-49 | -8.615850e-47 |
| Msa0679740 | Msa0964840 | 0.810271 | 1.252537e-50 | -8.615850e-47 |
| Msa0682050 | Msa0964840 | 0.823856 | 1.105850e-53 | -8.615850e-47 |
| Msa0682550 | Msa0964840 | 0.823946 | 1.053101e-53 | -8.615850e-47 |
| Msa0682620 | Msa0964840 | 0.812082 | 5.069892e-51 | -8.615850e-47 |
| Msa0683510 | Msa0964840 | 0.804417 | 2.182087e-49 | -8.615850e-47 |
| Msa0688770 | Msa0964840 | 0.808583 | 2.884373e-50 | -8.615850e-47 |
| Msa0697160 | Msa0964840 | 0.801442 | 8.987982e-49 | -8.615850e-47 |
| Msa0717890 | Msa0964840 | 0.834391 | 3.079942e-56 | -8.615850e-47 |
| Msa0731940 | Msa0964840 | 0.807918 | 3.997676e-50 | -8.615850e-47 |
| Msa0733390 | Msa0964840 | 0.800198 | 1.612547e-48 | -8.615850e-47 |
| Msa0734290 | Msa0964840 | 0.806914 | 6.525613e-50 | -8.615850e-47 |
| Msa0739580 | Msa0964840 | 0.811827 | 5.761942e-51 | -8.615850e-47 |
| Msa0739730 | Msa0964840 | 0.810125 | 1.346801e-50 | -8.615850e-47 |
| Msa0746160 | Msa0964840 | 0.806390 | 8.418471e-50 | -8.615850e-47 |
| Msa0760130 | Msa0964840 | 0.826147 | 3.182217e-54 | -8.615850e-47 |
| Msa0769180 | Msa0964840 | 0.817838 | 2.679149e-52 | -8.615850e-47 |
| Msa0782360 | Msa0964840 | 0.813293 | 2.754934e-51 | -8.615850e-47 |
| Msa0785250 | Msa0964840 | 0.805308 | 1.421007e-49 | -8.615850e-47 |
| Msa0798430 | Msa0964840 | 0.806129 | 9.558178e-50 | -8.615850e-47 |
| Msa0816150 | Msa0964840 | 0.839256 | 1.766726e-57 | -8.615850e-47 |
| Msa0819890 | Msa0964840 | 0.800939 | 1.138767e-48 | -8.615850e-47 |
| Msa0822870 | Msa0964840 | 0.800582 | 1.347151e-48 | -8.615850e-47 |
| Msa0824660 | Msa0964840 | 0.816222 | 6.181670e-52 | -8.615850e-47 |
| Msa0824840 | Msa0964840 | 0.826151 | 3.175574e-54 | -8.615850e-47 |
| Msa0828560 | Msa0964840 | 0.807402 | 5.144305e-50 | -8.615850e-47 |
| Msa0124130 | Msa0964840 | 0.827225 | 1.759610e-54 | -8.615850e-47 |
| Msa0125090 | Msa0964840 | 0.821300 | 4.345830e-53 | -8.615850e-47 |
| Msa0131900 | Msa0964840 | 0.829448 | 5.119603e-55 | -8.615850e-47 |
| Msa0142200 | Msa0964840 | 0.807679 | 4.492327e-50 | -8.615850e-47 |
| Msa0149140 | Msa0964840 | 0.800097 | 1.690782e-48 | -8.615850e-47 |
| Msa0152400 | Msa0964840 | 0.812184 | 4.817481e-51 | -8.615850e-47 |
| Msa0157290 | Msa0964840 | 0.840022 | 1.116342e-57 | -8.615850e-47 |
| Msa0164330 | Msa0964840 | 0.836932 | 7.002418e-57 | -8.615850e-47 |
| Msa0165210 | Msa0964840 | 0.813754 | 2.180435e-51 | -8.615850e-47 |
| Msa0169860 | Msa0964840 | 0.841539 | 4.469908e-58 | -8.615850e-47 |
| Msa0169870 | Msa0964840 | 0.805076 | 1.589826e-49 | -8.615850e-47 |
| Msa0169920 | Msa0964840 | 0.809700 | 1.662377e-50 | -8.615850e-47 |
| Msa0175730 | Msa0964840 | 0.802910 | 4.482801e-49 | -8.615850e-47 |
| Msa0197100 | Msa0964840 | 0.839905 | 1.197912e-57 | -8.615850e-47 |
| Msa0197660 | Msa0964840 | 0.802512 | 5.416564e-49 | -8.615850e-47 |
| Msa0212150 | Msa0964840 | 0.832459 | 9.342746e-56 | -8.615850e-47 |
| Msa0212990 | Msa0964840 | 0.823326 | 1.470997e-53 | -8.615850e-47 |
| Msa0213040 | Msa0964840 | 0.807739 | 4.363708e-50 | -8.615850e-47 |
| Msa0213520 | Msa0964840 | 0.829426 | 5.180975e-55 | -8.615850e-47 |
| Msa0214300 | Msa0964840 | 0.800101 | 1.687751e-48 | -8.615850e-47 |
| Msa0218810 | Msa0964840 | 0.802863 | 4.584306e-49 | -8.615850e-47 |
| Msa0221290 | Msa0964840 | 0.864036 | 1.623005e-64 | -8.615850e-47 |
| Msa0224780 | Msa0964840 | 0.818069 | 2.375352e-52 | -8.615850e-47 |
| Msa0227470 | Msa0964840 | 0.807737 | 4.367576e-50 | -8.615850e-47 |
| Msa0230740 | Msa0964840 | 0.818176 | 2.246844e-52 | -8.615850e-47 |
| Msa0237310 | Msa0964840 | 0.816078 | 6.657583e-52 | -8.615850e-47 |
| Msa0376350 | Msa0964840 | 0.810470 | 1.134284e-50 | -8.615850e-47 |
| Msa0385390 | Msa0964840 | 0.843217 | 1.604684e-58 | -8.615850e-47 |
| Msa0388960 | Msa0964840 | 0.813853 | 2.073968e-51 | -8.615850e-47 |
| Msa0395790 | Msa0964840 | 0.829548 | 4.838951e-55 | -8.615850e-47 |
| Msa0399300 | Msa0964840 | 0.805774 | 1.134682e-49 | -8.615850e-47 |
| Msa0403970 | Msa0964840 | 0.805072 | 1.592579e-49 | -8.615850e-47 |
| Msa0406000 | Msa0964840 | 0.812047 | 5.161137e-51 | -8.615850e-47 |
| Msa0406770 | Msa0964840 | 0.811841 | 5.722238e-51 | -8.615850e-47 |
| Msa0410650 | Msa0964840 | 0.802336 | 5.887459e-49 | -8.615850e-47 |
| Msa0415320 | Msa0964840 | 0.825655 | 4.163168e-54 | -8.615850e-47 |
| Msa0424340 | Msa0964840 | 0.802590 | 5.218948e-49 | -8.615850e-47 |
| Msa0424790 | Msa0964840 | 0.802373 | 5.784791e-49 | -8.615850e-47 |
| Msa0439970 | Msa0964840 | 0.813698 | 2.243225e-51 | -8.615850e-47 |
| Msa0440750 | Msa0964840 | 0.814763 | 1.305700e-51 | -8.615850e-47 |
| Msa0443260 | Msa0964840 | 0.818615 | 1.787404e-52 | -8.615850e-47 |
| Msa0451400 | Msa0964840 | 0.830348 | 3.088840e-55 | -8.615850e-47 |
| Msa0452710 | Msa0964840 | 0.810969 | 8.850051e-51 | -8.615850e-47 |
| Msa0452920 | Msa0964840 | 0.804752 | 1.857721e-49 | -8.615850e-47 |
| Msa0464680 | Msa0964840 | 0.813541 | 2.429561e-51 | -8.615850e-47 |
| Msa0467430 | Msa0964840 | 0.814944 | 1.190353e-51 | -8.615850e-47 |
| Msa0479170 | Msa0964840 | 0.801536 | 8.596153e-49 | -8.615850e-47 |
| Msa0239030 | Msa0964840 | 0.855034 | 8.266886e-62 | -8.615850e-47 |
| Msa0239360 | Msa0964840 | 0.805755 | 1.145326e-49 | -8.615850e-47 |
| Msa0239800 | Msa0964840 | 0.801439 | 8.998350e-49 | -8.615850e-47 |
| Msa0243100 | Msa0964840 | 0.831098 | 2.023763e-55 | -8.615850e-47 |
| Msa0244960 | Msa0964840 | 0.807592 | 4.688661e-50 | -8.615850e-47 |
| Msa0252770 | Msa0964840 | 0.831601 | 1.521789e-55 | -8.615850e-47 |
| Msa0261340 | Msa0964840 | 0.823744 | 1.174814e-53 | -8.615850e-47 |
| Msa0274730 | Msa0964840 | 0.814468 | 1.517500e-51 | -8.615850e-47 |
| Msa0276740 | Msa0964840 | 0.857939 | 1.159796e-62 | -8.615850e-47 |
| Msa0284350 | Msa0964840 | 0.804177 | 2.448600e-49 | -8.615850e-47 |
| Msa0287650 | Msa0964840 | 0.814341 | 1.618573e-51 | -8.615850e-47 |
| Msa0287740 | Msa0964840 | 0.801813 | 7.542805e-49 | -8.615850e-47 |
| Msa0289920 | Msa0964840 | 0.829575 | 4.767208e-55 | -8.615850e-47 |
| Msa0290870 | Msa0964840 | 0.800928 | 1.144656e-48 | -8.615850e-47 |
| Msa0292930 | Msa0964840 | 0.822082 | 2.865471e-53 | -8.615850e-47 |
| Msa0300270 | Msa0964840 | 0.821089 | 4.860051e-53 | -8.615850e-47 |
| Msa0300320 | Msa0964840 | 0.814223 | 1.718301e-51 | -8.615850e-47 |
| Msa0306120 | Msa0964840 | 0.816047 | 6.762652e-52 | -8.615850e-47 |
| Msa0315530 | Msa0964840 | 0.815631 | 8.373781e-52 | -8.615850e-47 |
| Msa0316680 | Msa0964840 | 0.847456 | 1.143528e-59 | -8.615850e-47 |
| Msa0317510 | Msa0964840 | 0.812400 | 4.320534e-51 | -8.615850e-47 |
| Msa0323610 | Msa0964840 | 0.804639 | 1.961222e-49 | -8.615850e-47 |
| Msa0329620 | Msa0964840 | 0.828516 | 8.609329e-55 | -8.615850e-47 |
| Msa0330340 | Msa0964840 | 0.822670 | 2.091768e-53 | -8.615850e-47 |
| Msa0331000 | Msa0964840 | 0.820927 | 5.295212e-53 | -8.615850e-47 |
| Msa0336310 | Msa0964840 | 0.807711 | 4.422781e-50 | -8.615850e-47 |
| Msa0337700 | Msa0964840 | 0.804142 | 2.489559e-49 | -8.615850e-47 |
| Msa0345330 | Msa0964840 | 0.800335 | 1.512776e-48 | -8.615850e-47 |
| Msa0359250 | Msa0964840 | 0.806267 | 8.937363e-50 | -8.615850e-47 |
| Msa0360210 | Msa0964840 | 0.811258 | 7.658276e-51 | -8.615850e-47 |
| Msa0484650 | Msa0964840 | 0.814078 | 1.850305e-51 | -8.615850e-47 |
| Msa0484780 | Msa0964840 | 0.808306 | 3.304430e-50 | -8.615850e-47 |
| Msa0491250 | Msa0964840 | 0.803140 | 4.017943e-49 | -8.615850e-47 |
| Msa0492190 | Msa0964840 | 0.816398 | 5.644159e-52 | -8.615850e-47 |
| Msa0495320 | Msa0964840 | 0.808604 | 2.854579e-50 | -8.615850e-47 |
| Msa0503060 | Msa0964840 | 0.810680 | 1.021762e-50 | -8.615850e-47 |
| Msa0503580 | Msa0964840 | 0.804519 | 2.078151e-49 | -8.615850e-47 |
| Msa0515950 | Msa0964840 | 0.801463 | 8.898254e-49 | -8.615850e-47 |
| Msa0516170 | Msa0964840 | 0.810418 | 1.164277e-50 | -8.615850e-47 |
| Msa0523000 | Msa0964840 | 0.826129 | 3.213518e-54 | -8.615850e-47 |
| Msa0523460 | Msa0964840 | 0.806716 | 7.186746e-50 | -8.615850e-47 |
| Msa0527790 | Msa0964840 | 0.805643 | 1.209079e-49 | -8.615850e-47 |
| Msa0534930 | Msa0964840 | 0.816011 | 6.889563e-52 | -8.615850e-47 |
| Msa0535040 | Msa0964840 | 0.835388 | 1.727484e-56 | -8.615850e-47 |
| Msa0577510 | Msa0964840 | 0.804645 | 1.956041e-49 | -8.615850e-47 |
| Msa0591790 | Msa0964840 | 0.854744 | 1.003965e-61 | -8.615850e-47 |
| Msa0594090 | Msa0964840 | 0.808026 | 3.790310e-50 | -8.615850e-47 |
| Msa0600700 | Msa0964840 | 0.800639 | 1.311242e-48 | -8.615850e-47 |
| Msa0600930 | Msa0964840 | 0.806696 | 7.256155e-50 | -8.615850e-47 |
| Msa0602240 | Msa0964840 | 0.818009 | 2.451178e-52 | -8.615850e-47 |
| Msa0602250 | Msa0964840 | 0.822367 | 2.459844e-53 | -8.615850e-47 |
| Msa0843220 | Msa0964840 | 0.810839 | 9.440603e-51 | -8.615850e-47 |
| Msa0853660 | Msa0964840 | 0.817853 | 2.658066e-52 | -8.615850e-47 |
| Msa0860280 | Msa0964840 | 0.815193 | 1.047714e-51 | -8.615850e-47 |
| Msa0876550 | Msa0964840 | 0.831818 | 1.345324e-55 | -8.615850e-47 |
| Msa0876560 | Msa0964840 | 0.846790 | 1.740354e-59 | -8.615850e-47 |
| Msa0880140 | Msa0964840 | 0.837059 | 6.499276e-57 | -8.615850e-47 |
| Msa0895790 | Msa0964840 | 0.813159 | 2.947099e-51 | -8.615850e-47 |
| Msa0899950 | Msa0964840 | 0.808863 | 2.513104e-50 | -8.615850e-47 |
| Msa0903690 | Msa0964840 | 0.803176 | 3.950152e-49 | -8.615850e-47 |
| Msa0908050 | Msa0964840 | 0.800130 | 1.664890e-48 | -8.615850e-47 |
| Msa0909120 | Msa0964840 | 0.849421 | 3.268689e-60 | -8.615850e-47 |
| Msa0909140 | Msa0964840 | 0.860347 | 2.200804e-63 | -8.615850e-47 |
| Msa0910430 | Msa0964840 | 0.803049 | 4.196447e-49 | -8.615850e-47 |
| Msa0911540 | Msa0964840 | 0.857012 | 2.179987e-62 | -8.615850e-47 |
| Msa0922410 | Msa0964840 | 0.819928 | 8.978278e-53 | -8.615850e-47 |
| Msa0926890 | Msa0964840 | 0.806566 | 7.729087e-50 | -8.615850e-47 |
| Msa0936220 | Msa0964840 | 0.813721 | 2.217591e-51 | -8.615850e-47 |
| Msa0936410 | Msa0964840 | 0.805893 | 1.071369e-49 | -8.615850e-47 |
| Msa0941820 | Msa0964840 | 0.847874 | 8.772351e-60 | -8.615850e-47 |
| Msa0961770 | Msa0964840 | 0.820728 | 5.883933e-53 | -8.615850e-47 |
| Msa0964740 | Msa0964840 | 0.842517 | 2.464298e-58 | -8.615850e-47 |
| Msa0964840 | Msa0965310 | 0.817570 | 3.080098e-52 | -8.615850e-47 |
| Msa0964840 | Msa0967380 | 0.857001 | 2.196433e-62 | -8.615850e-47 |
| Msa0964840 | Msa0967870 | 0.802468 | 5.531942e-49 | -8.615850e-47 |
| Msa0964840 | Msa0969450 | 0.831056 | 2.072377e-55 | -8.615850e-47 |
| Msa0964840 | Msa0972100 | 0.800631 | 1.316258e-48 | -8.615850e-47 |
| Msa0964840 | Msa0972670 | 0.809211 | 2.116654e-50 | -8.615850e-47 |
| Msa0964840 | Msa0986030 | 0.808940 | 2.419233e-50 | -8.615850e-47 |
| Msa0964840 | Msa0999300 | 0.813571 | 2.392876e-51 | -8.615850e-47 |
| Msa0964840 | Msa0999350 | 0.815491 | 8.999150e-52 | -8.615850e-47 |
| Msa0964840 | Msa0999400 | 0.807349 | 5.278846e-50 | -8.615850e-47 |
| Msa0964840 | Msa0999410 | 0.804274 | 2.337145e-49 | -8.615850e-47 |
| Msa0964840 | Msa0999700 | 0.825444 | 4.671115e-54 | -8.615850e-47 |
| Msa0964840 | Msa1004800 | 0.812174 | 4.841253e-51 | -8.615850e-47 |
| Msa0964840 | Msa1004840 | 0.817125 | 3.878763e-52 | -8.615850e-47 |
| Msa0964840 | Msa1005870 | 0.807851 | 4.130725e-50 | -8.615850e-47 |
| Msa0964840 | Msa1010840 | 0.809769 | 1.606402e-50 | -8.615850e-47 |
| Msa0964840 | Msa1019430 | 0.804726 | 1.880843e-49 | -8.615850e-47 |
| Msa0964840 | Msa1019470 | 0.806362 | 8.535736e-50 | -8.615850e-47 |
| Msa0964840 | Msa1039020 | 0.830802 | 2.392139e-55 | -8.615850e-47 |
| Msa0964840 | Msa1043370 | 0.814607 | 1.413257e-51 | -8.615850e-47 |
| Msa0964840 | Msa1047080 | 0.812692 | 3.730710e-51 | -8.615850e-47 |
| Msa0964840 | Msa1052360 | 0.840961 | 6.342795e-58 | -8.615850e-47 |
| Msa0964840 | Msa1075540 | 0.806628 | 7.498999e-50 | -8.615850e-47 |
| Msa0964840 | Msa1079590 | 0.816169 | 6.352217e-52 | -8.615850e-47 |
| Msa0964840 | Msa1081330 | 0.800719 | 1.262869e-48 | -8.615850e-47 |
| Msa0964840 | Msa1082500 | 0.823028 | 1.726410e-53 | -8.615850e-47 |
| Msa0964840 | Msa1092010 | 0.808515 | 2.982577e-50 | -8.615850e-47 |
| Msa0964840 | Msa1096210 | 0.847884 | 8.718642e-60 | -8.615850e-47 |
| Msa0964840 | Msa1123380 | 0.808192 | 3.493903e-50 | -8.615850e-47 |
| Msa0964840 | Msa1137570 | 0.810387 | 1.182078e-50 | -8.615850e-47 |
| Msa0964840 | Msa1140640 | 0.834213 | 3.413516e-56 | -8.615850e-47 |
| Msa0964840 | Msa1151910 | 0.816414 | 5.600152e-52 | -8.615850e-47 |
| Msa0964840 | Msa1158310 | 0.817464 | 3.253967e-52 | -8.615850e-47 |
| Msa0964840 | Msa1168160 | 0.805407 | 1.354773e-49 | -8.615850e-47 |
| Msa0964840 | Msa1179280 | 0.815904 | 7.277920e-52 | -8.615850e-47 |
| Msa0964840 | Msa1193290 | 0.829050 | 6.393330e-55 | -8.615850e-47 |
| Msa0964840 | Msa1199830 | -0.802658 | 5.053146e-49 | -8.615850e-47 |
| Msa0964840 | Msa1200420 | 0.801978 | 6.975055e-49 | -8.615850e-47 |
| Msa0964840 | Msa1201110 | 0.818202 | 2.217013e-52 | -8.615850e-47 |
| Msa0964840 | Msa1201160 | 0.804458 | 2.140033e-49 | -8.615850e-47 |
| Msa0964840 | Msa1228190 | 0.828421 | 9.074331e-55 | -8.615850e-47 |
| Msa0964840 | Msa1228200 | 0.813366 | 2.653999e-51 | -8.615850e-47 |
| Msa0964840 | Msa1233560 | 0.810093 | 1.368388e-50 | -8.615850e-47 |
| Msa0964840 | Msa1236410 | 0.806438 | 8.225888e-50 | -8.615850e-47 |
| Msa0964840 | Msa1238930 | 0.804131 | 2.502727e-49 | -8.615850e-47 |
| Msa0964840 | Msa1239920 | 0.814854 | 1.246248e-51 | -8.615850e-47 |
| Msa0964840 | Msa1242220 | 0.817100 | 3.929617e-52 | -8.615850e-47 |
| Msa0964840 | Msa1271260 | 0.800813 | 1.208389e-48 | -8.615850e-47 |
| Msa0964840 | Msa1276660 | 0.805536 | 1.272934e-49 | -8.615850e-47 |
| Msa0964840 | Msa1283860 | 0.825827 | 3.790943e-54 | -8.615850e-47 |
| Msa0964840 | Msa1294290 | 0.805324 | 1.410482e-49 | -8.615850e-47 |
| Msa0964840 | Msa1298370 | 0.801429 | 9.040491e-49 | -8.615850e-47 |
| Msa0964840 | Msa1306850 | 0.827400 | 1.597414e-54 | -8.615850e-47 |
| Msa0964840 | Msa1313150 | 0.811626 | 6.371811e-51 | -8.615850e-47 |
| Msa0964840 | Msa1320410 | 0.805874 | 1.081452e-49 | -8.615850e-47 |
| Msa0964840 | Msa1322890 | 0.810597 | 1.064835e-50 | -8.615850e-47 |
| Msa0964840 | Msa1326630 | 0.810285 | 1.243576e-50 | -8.615850e-47 |
| Msa0964840 | Msa1331000 | 0.804884 | 1.743375e-49 | -8.615850e-47 |
| Msa0964840 | Msa1366340 | 0.834701 | 2.573692e-56 | -8.615850e-47 |
| Msa0964840 | Msa1374550 | 0.807876 | 4.080008e-50 | -8.615850e-47 |
| Msa0964840 | Msa1390690 | 0.817402 | 3.360537e-52 | -8.615850e-47 |
| Msa0964840 | Msa1392900 | 0.812399 | 4.324363e-51 | -8.615850e-47 |
| Msa0964840 | Msa1406780 | 0.810474 | 1.132122e-50 | -8.615850e-47 |
| Msa0964840 | Msa1424680 | 0.817730 | 2.834529e-52 | -8.615850e-47 |
| Msa0964840 | Msa1431850 | 0.822734 | 2.021265e-53 | -8.615850e-47 |
| Msa0964840 | Msa1438250 | 0.837120 | 6.270219e-57 | -8.615850e-47 |
| Msa0964840 | Msa1439610 | 0.810392 | 1.179211e-50 | -8.615850e-47 |
| Msa0964840 | Msa1457430 | 0.800945 | 1.135941e-48 | -8.615850e-47 |
| Msa0964840 | Msa1466540 | 0.808114 | 3.631765e-50 | -8.615850e-47 |
| Msa0964840 | Msa1466920 | 0.801396 | 9.182144e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0964840 | MtrunA17_Chr6g0485481 | 50.376 | 133 | 34 | 2 | 28 | 128 | 1 | 133 | 4.38e-35 | 120 |
| Msa0964840 | MtrunA17_Chr6g0485491 | 66.667 | 66 | 22 | 0 | 85 | 150 | 50 | 115 | 6.61e-25 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 41 sgRNAs with CRISPR-Local
Find 128 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATGAAAACATTGATTAT+TGG | 0.176776 | 6_3:+91869774 | Msa0964840:CDS |
| GCTCACCTTCTACTTCTTCT+TGG | 0.223849 | 6_3:+91870575 | Msa0964840:CDS |
| GGTCATTCTTCTTCATCTTC+TGG | 0.226370 | 6_3:+91870553 | Msa0964840:CDS |
| GACTGACTCTTCATCCCTTT+TGG | 0.233722 | 6_3:-91870211 | None:intergenic |
| ATAATATCATGTAGCGTTAA+TGG | 0.280407 | 6_3:+91870532 | Msa0964840:intron |
| ACTATTAAAGATCTCTTTGT+AGG | 0.281391 | 6_3:-91869668 | None:intergenic |
| AGAGTCAGTCAAAGGTTCTT+TGG | 0.292750 | 6_3:+91870224 | Msa0964840:CDS |
| TCAATTGAGATGGTTATGTT+AGG | 0.316257 | 6_3:-91868174 | None:intergenic |
| AGTATCACCTGGCTTTGATA+TGG | 0.372210 | 6_3:-91869873 | None:intergenic |
| GAGTCAGTCAAAGGTTCTTT+GGG | 0.376370 | 6_3:+91870225 | Msa0964840:CDS |
| AATTCATCATACGTTATTCC+AGG | 0.389672 | 6_3:-91870291 | None:intergenic |
| TTCTATTCACATCTTCCAAA+AGG | 0.390556 | 6_3:+91870196 | Msa0964840:CDS |
| CAATTGAGATGGTTATGTTA+GGG | 0.394866 | 6_3:-91868173 | None:intergenic |
| TCTTGACGCCGTCAGCCATT+TGG | 0.395579 | 6_3:-91870110 | None:intergenic |
| ACCTACACTCAACACATATT+CGG | 0.429644 | 6_3:+91869709 | Msa0964840:CDS |
| AGAAAAGGAGTGTTTGTTGT+TGG | 0.434642 | 6_3:-91868144 | None:intergenic |
| TTCATGATTGATGCTTGTTA+CGG | 0.446394 | 6_3:+91870138 | Msa0964840:CDS |
| ATTGATGCTTGTTACGGAGG+GGG | 0.492034 | 6_3:+91870144 | Msa0964840:CDS |
| ATTCACCAAGAAGAAGTAGA+AGG | 0.495476 | 6_3:-91870580 | None:intergenic |
| GAAGAACAACACTCAAAGCT+TGG | 0.496080 | 6_3:-91868122 | None:intergenic |
| TGATTGATGCTTGTTACGGA+GGG | 0.498805 | 6_3:+91870142 | Msa0964840:CDS |
| TCTATTCACATCTTCCAAAA+GGG | 0.515999 | 6_3:+91870197 | Msa0964840:CDS |
| AAGAACAACACTCAAAGCTT+GGG | 0.524167 | 6_3:-91868121 | None:intergenic |
| ATGTTAGGGGTGAAAAGAAA+AGG | 0.530276 | 6_3:-91868159 | None:intergenic |
| TTAATTACCATATCAAAGCC+AGG | 0.542624 | 6_3:+91869866 | Msa0964840:CDS |
| ATGATTGATGCTTGTTACGG+AGG | 0.558998 | 6_3:+91870141 | Msa0964840:CDS |
| ACTGTTTCTCTAGAGATGCT+AGG | 0.561940 | 6_3:+91870482 | Msa0964840:CDS |
| AATTGAGATGGTTATGTTAG+GGG | 0.567185 | 6_3:-91868172 | None:intergenic |
| TTGATGCTTGTTACGGAGGG+GGG | 0.576592 | 6_3:+91870145 | Msa0964840:CDS |
| GATTGATGCTTGTTACGGAG+GGG | 0.589936 | 6_3:+91870143 | Msa0964840:CDS |
| ATTCATCATACGTTATTCCA+GGG | 0.594580 | 6_3:-91870290 | None:intergenic |
| ATGTGAATAGAACAACTTTG+TGG | 0.598030 | 6_3:-91870185 | None:intergenic |
| AGGGATGAAGAGTCAGTCAA+AGG | 0.601689 | 6_3:+91870216 | Msa0964840:CDS |
| ATAGAATCAAGTTAAGAGAG+TGG | 0.603141 | 6_3:+91870410 | Msa0964840:intron |
| GATTGTGTTAATGATTACCC+TGG | 0.604085 | 6_3:+91870273 | Msa0964840:CDS |
| TCCGAATATGTGTTGAGTGT+AGG | 0.619739 | 6_3:-91869710 | None:intergenic |
| ACACTCAACACATATTCGGA+TGG | 0.639597 | 6_3:+91869713 | Msa0964840:CDS |
| TGAATAGAACAACTTTGTGG+TGG | 0.649665 | 6_3:-91870182 | None:intergenic |
| GTGTTAGACCAAATGGCTGA+CGG | 0.654978 | 6_3:+91870102 | Msa0964840:CDS |
| TCAGCATCAATAAGGAAACC+AGG | 0.656233 | 6_3:-91869818 | None:intergenic |
| GAATAGAACAACTTTGTGGT+GGG | 0.689752 | 6_3:-91870181 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAATAAAGTTATATTTCTA+AGG | - | chr6_3:91868344-91868363 | None:intergenic | 10.0% |
| !! | GATAAAAAAAATATATTACA+TGG | + | chr6_3:91869350-91869369 | Msa0964840:intron | 10.0% |
| !! | TTACAAATAAAATAGAAAAA+TGG | - | chr6_3:91869599-91869618 | None:intergenic | 10.0% |
| !!! | TGTATTTTATCAAGAAATTA+AGG | + | chr6_3:91868252-91868271 | Msa0964840:CDS | 15.0% |
| !! | AAAATACATCTAAGAATATA+TGG | - | chr6_3:91868294-91868313 | None:intergenic | 15.0% |
| !! | TAAAAATGATAATATCATGA+GGG | - | chr6_3:91869156-91869175 | None:intergenic | 15.0% |
| !! | ATGATATGCAATAAAATAAA+TGG | - | chr6_3:91869515-91869534 | None:intergenic | 15.0% |
| !!! | GTTTTTAATCACTATGTATT+TGG | - | chr6_3:91868218-91868237 | None:intergenic | 20.0% |
| !!! | AAAATACATGCTTTTTTTCT+TGG | - | chr6_3:91868240-91868259 | None:intergenic | 20.0% |
| !!! | TTATTATTTTGTAGTCCTTT+TGG | + | chr6_3:91868357-91868376 | Msa0964840:intron | 20.0% |
| !!! | ATGCTTTTAATTTTAAACGT+GGG | - | chr6_3:91868400-91868419 | None:intergenic | 20.0% |
| !!! | TATGCTTTTAATTTTAAACG+TGG | - | chr6_3:91868401-91868420 | None:intergenic | 20.0% |
| !! | ATATTTGTTTATGTTGTGTT+TGG | + | chr6_3:91868995-91869014 | Msa0964840:intron | 20.0% |
| !!! | TAAGTTTTCGAAATTATAAG+TGG | + | chr6_3:91869018-91869037 | Msa0964840:intron | 20.0% |
| !! | CAATAAAAAATGTTACTACT+GGG | + | chr6_3:91869060-91869079 | Msa0964840:intron | 20.0% |
| !! | CTAAAAATGATAATATCATG+AGG | - | chr6_3:91869157-91869176 | None:intergenic | 20.0% |
| !! | CCTCAAATATGAATTATATT+AGG | - | chr6_3:91869299-91869318 | None:intergenic | 20.0% |
| !! | CCTAATATAATTCATATTTG+AGG | + | chr6_3:91869296-91869315 | Msa0964840:intron | 20.0% |
| !! | ATATGCAATAAAATAAATGG+CGG | - | chr6_3:91869512-91869531 | None:intergenic | 20.0% |
| !!! | AAGATGAAAACATTGATTAT+TGG | + | chr6_3:91869774-91869793 | Msa0964840:CDS | 20.0% |
| !! | TTTTAAACGTGGGAAAAAAA+TGG | - | chr6_3:91868390-91868409 | None:intergenic | 25.0% |
| ! | TATTAACTAAAAAAAAGGGC+TGG | - | chr6_3:91868658-91868677 | None:intergenic | 25.0% |
| !!! | TTTTAAAGTAAAAAAAGGGC+TGG | - | chr6_3:91868707-91868726 | None:intergenic | 25.0% |
| ! | ATGATAGAAACATAACACAA+TGG | - | chr6_3:91868920-91868939 | None:intergenic | 25.0% |
| !!! | GCGGTTTGTTAAAATAATTA+AGG | - | chr6_3:91868945-91868964 | None:intergenic | 25.0% |
| !!! | CCAGTAGTAACATTTTTTAT+TGG | - | chr6_3:91869062-91869081 | None:intergenic | 25.0% |
| ! | CCAATAAAAAATGTTACTAC+TGG | + | chr6_3:91869059-91869078 | Msa0964840:intron | 25.0% |
| ! | ACTATTAAAGATCTCTTTGT+AGG | - | chr6_3:91869671-91869690 | None:intergenic | 25.0% |
| !! | GAAAAAAATAAAGTATCACC+TGG | - | chr6_3:91869887-91869906 | None:intergenic | 25.0% |
| !!! | CTTTATTTTTTTCACTTCAG+TGG | + | chr6_3:91869894-91869913 | Msa0964840:intron | 25.0% |
| !!! | TAAAAAAGTGTTAGACCAAA+TGG | + | chr6_3:91870095-91870114 | Msa0964840:CDS | 25.0% |
| ! | CAAAGGATCCAAATATTATA+TGG | + | chr6_3:91870318-91870337 | Msa0964840:intron | 25.0% |
| !!! | AGAATTTTTTATCTCATCAG+TGG | - | chr6_3:91870379-91870398 | None:intergenic | 25.0% |
| ! | ATAATATCATGTAGCGTTAA+TGG | + | chr6_3:91870532-91870551 | Msa0964840:intron | 25.0% |
| AATTGAGATGGTTATGTTAG+GGG | - | chr6_3:91868175-91868194 | None:intergenic | 30.0% | |
| CAATTGAGATGGTTATGTTA+GGG | - | chr6_3:91868176-91868195 | None:intergenic | 30.0% | |
| TCAATTGAGATGGTTATGTT+AGG | - | chr6_3:91868177-91868196 | None:intergenic | 30.0% | |
| ! | GAGAAAGTTTTCAATTGAGA+TGG | - | chr6_3:91868187-91868206 | None:intergenic | 30.0% |
| CAACAAGACAAATCACATTT+AGG | - | chr6_3:91868460-91868479 | None:intergenic | 30.0% | |
| ! | CTAAATGTGATTTGTCTTGT+TGG | + | chr6_3:91868458-91868477 | Msa0964840:intron | 30.0% |
| AAACATAAGATGATGAAGAG+AGG | + | chr6_3:91868783-91868802 | Msa0964840:intron | 30.0% | |
| ACTAATCCGACAAATCTATA+CGG | - | chr6_3:91868874-91868893 | None:intergenic | 30.0% | |
| ! | TTACTGATAGTGAAAATCGT+AGG | + | chr6_3:91869195-91869214 | Msa0964840:intron | 30.0% |
| ! | GTATTTTGTCAGCATCAATA+AGG | - | chr6_3:91869829-91869848 | None:intergenic | 30.0% |
| TTAATTACCATATCAAAGCC+AGG | + | chr6_3:91869866-91869885 | Msa0964840:CDS | 30.0% | |
| ATGGTAACTATCAACAAAGA+GGG | + | chr6_3:91869919-91869938 | Msa0964840:intron | 30.0% | |
| TATTTGTGATTCTCAATGCA+TGG | + | chr6_3:91870023-91870042 | Msa0964840:intron | 30.0% | |
| ! | TTCATGATTGATGCTTGTTA+CGG | + | chr6_3:91870138-91870157 | Msa0964840:CDS | 30.0% |
| ATGTGAATAGAACAACTTTG+TGG | - | chr6_3:91870188-91870207 | None:intergenic | 30.0% | |
| TTCTATTCACATCTTCCAAA+AGG | + | chr6_3:91870196-91870215 | Msa0964840:CDS | 30.0% | |
| TCTATTCACATCTTCCAAAA+GGG | + | chr6_3:91870197-91870216 | Msa0964840:CDS | 30.0% | |
| ATTCATCATACGTTATTCCA+GGG | - | chr6_3:91870293-91870312 | None:intergenic | 30.0% | |
| AATTCATCATACGTTATTCC+AGG | - | chr6_3:91870294-91870313 | None:intergenic | 30.0% | |
| CGTATGATGAATTGATACAA+AGG | + | chr6_3:91870301-91870320 | Msa0964840:intron | 30.0% | |
| CATGCTGACCATATAATATT+TGG | - | chr6_3:91870329-91870348 | None:intergenic | 30.0% | |
| CAAATATTATATGGTCAGCA+TGG | + | chr6_3:91870327-91870346 | Msa0964840:intron | 30.0% | |
| ATAGAATCAAGTTAAGAGAG+TGG | + | chr6_3:91870410-91870429 | Msa0964840:intron | 30.0% | |
| !! | AGAAAAGGAGTGTTTGTTGT+TGG | - | chr6_3:91868147-91868166 | None:intergenic | 35.0% |
| ATGTTAGGGGTGAAAAGAAA+AGG | - | chr6_3:91868162-91868181 | None:intergenic | 35.0% | |
| AAAAATGGAAAGGGACCAAA+AGG | - | chr6_3:91868375-91868394 | None:intergenic | 35.0% | |
| ACGTGGGAAAAAAATGGAAA+GGG | - | chr6_3:91868384-91868403 | None:intergenic | 35.0% | |
| AACGTGGGAAAAAAATGGAA+AGG | - | chr6_3:91868385-91868404 | None:intergenic | 35.0% | |
| ATACACAACTATTGTGAGAG+TGG | - | chr6_3:91868967-91868986 | None:intergenic | 35.0% | |
| ACCTACACTCAACACATATT+CGG | + | chr6_3:91869709-91869728 | Msa0964840:CDS | 35.0% | |
| TATTGGCAAGACAAAAACGA+TGG | + | chr6_3:91869791-91869810 | Msa0964840:CDS | 35.0% | |
| !!! | TTTTTTCACTTCAGTGGACA+TGG | + | chr6_3:91869900-91869919 | Msa0964840:intron | 35.0% |
| CATGGTAACTATCAACAAAG+AGG | + | chr6_3:91869918-91869937 | Msa0964840:intron | 35.0% | |
| TTGAGGAAGTTACCAAGTAA+AGG | - | chr6_3:91869975-91869994 | None:intergenic | 35.0% | |
| TATTAGCATGAGATGTGTTG+AGG | - | chr6_3:91869992-91870011 | None:intergenic | 35.0% | |
| GAATAGAACAACTTTGTGGT+GGG | - | chr6_3:91870184-91870203 | None:intergenic | 35.0% | |
| TGAATAGAACAACTTTGTGG+TGG | - | chr6_3:91870185-91870204 | None:intergenic | 35.0% | |
| GATTGTGTTAATGATTACCC+TGG | + | chr6_3:91870273-91870292 | Msa0964840:CDS | 35.0% | |
| TTATCTCATCAGTGGCATAA+AGG | - | chr6_3:91870371-91870390 | None:intergenic | 35.0% | |
| !!! | TCTGCATCTAGCTTTTTCAT+TGG | - | chr6_3:91870455-91870474 | None:intergenic | 35.0% |
| TCTAGAGATGCTAGGTATTT+AGG | + | chr6_3:91870490-91870509 | Msa0964840:intron | 35.0% | |
| CATGGGTGGAATTGGAAAAT+AGG | + | chr6_3:91868536-91868555 | Msa0964840:intron | 40.0% | |
| ! | TGAGTTGAATCTACTCACCA+CGG | + | chr6_3:91868828-91868847 | Msa0964840:intron | 40.0% |
| TCGATGCCGTATAGATTTGT+CGG | + | chr6_3:91868865-91868884 | Msa0964840:intron | 40.0% | |
| TGTTACTACTGGGTTCTTCT+AGG | + | chr6_3:91869070-91869089 | Msa0964840:intron | 40.0% | |
| ATAGTGAAAATCGTAGGCAG+AGG | + | chr6_3:91869201-91869220 | Msa0964840:intron | 40.0% | |
| TCCGAATATGTGTTGAGTGT+AGG | - | chr6_3:91869713-91869732 | None:intergenic | 40.0% | |
| ACACTCAACACATATTCGGA+TGG | + | chr6_3:91869713-91869732 | Msa0964840:CDS | 40.0% | |
| TCAGCATCAATAAGGAAACC+AGG | - | chr6_3:91869821-91869840 | None:intergenic | 40.0% | |
| !! | AGTATCACCTGGCTTTGATA+TGG | - | chr6_3:91869876-91869895 | None:intergenic | 40.0% |
| AATTACCTTGTTGCAGCCAA+TGG | + | chr6_3:91869945-91869964 | Msa0964840:intron | 40.0% | |
| ACCAAGTAAAGGAGTTCCAT+TGG | - | chr6_3:91869964-91869983 | None:intergenic | 40.0% | |
| ! | ATGATTGATGCTTGTTACGG+AGG | + | chr6_3:91870141-91870160 | Msa0964840:CDS | 40.0% |
| ! | TGATTGATGCTTGTTACGGA+GGG | + | chr6_3:91870142-91870161 | Msa0964840:CDS | 40.0% |
| AGAGTCAGTCAAAGGTTCTT+TGG | + | chr6_3:91870224-91870243 | Msa0964840:CDS | 40.0% | |
| GAGTCAGTCAAAGGTTCTTT+GGG | + | chr6_3:91870225-91870244 | Msa0964840:CDS | 40.0% | |
| ! | ACTGTTTCTCTAGAGATGCT+AGG | + | chr6_3:91870482-91870501 | Msa0964840:CDS | 40.0% |
| GGTCATTCTTCTTCATCTTC+TGG | + | chr6_3:91870553-91870572 | Msa0964840:CDS | 40.0% | |
| !! | CTATACGGCATCGATTCTGA+CGG | - | chr6_3:91868859-91868878 | None:intergenic | 45.0% |
| CACAACTATTGTGAGAGTGG+CGG | - | chr6_3:91868964-91868983 | None:intergenic | 45.0% | |
| TGGCAAGACAAAAACGATGG+AGG | + | chr6_3:91869794-91869813 | Msa0964840:CDS | 45.0% | |
| GCCAATGGAACTCCTTTACT+TGG | + | chr6_3:91869960-91869979 | Msa0964840:intron | 45.0% | |
| ! | ATTTGCTACGTGACTTGTGC+AGG | + | chr6_3:91870063-91870082 | Msa0964840:intron | 45.0% |
| GTGTTAGACCAAATGGCTGA+CGG | + | chr6_3:91870102-91870121 | Msa0964840:CDS | 45.0% | |
| ! | GATTGATGCTTGTTACGGAG+GGG | + | chr6_3:91870143-91870162 | Msa0964840:CDS | 45.0% |
| ! | ATTGATGCTTGTTACGGAGG+GGG | + | chr6_3:91870144-91870163 | Msa0964840:CDS | 45.0% |
| !! | GACTGACTCTTCATCCCTTT+TGG | - | chr6_3:91870214-91870233 | None:intergenic | 45.0% |
| AGGGATGAAGAGTCAGTCAA+AGG | + | chr6_3:91870216-91870235 | Msa0964840:CDS | 45.0% | |
| TCATCAGTGGCATAAAGGTC+GGG | - | chr6_3:91870366-91870385 | None:intergenic | 45.0% | |
| CTCATCAGTGGCATAAAGGT+CGG | - | chr6_3:91870367-91870386 | None:intergenic | 45.0% | |
| GCTCACCTTCTACTTCTTCT+TGG | + | chr6_3:91870575-91870594 | Msa0964840:CDS | 45.0% | |
| !! | TATTTATTAACTAAAAAAAA+GGG | - | chr6_3:91868662-91868681 | None:intergenic | 5.0% |
| !! | TTATTTATTAACTAAAAAAA+AGG | - | chr6_3:91868663-91868682 | None:intergenic | 5.0% |
| !!! | TTATTTTTAAAGTAAAAAAA+GGG | - | chr6_3:91868711-91868730 | None:intergenic | 5.0% |
| !!! | ATTATTTTTAAAGTAAAAAA+AGG | - | chr6_3:91868712-91868731 | None:intergenic | 5.0% |
| !! | TAAATTATTGTAAAAATAAA+TGG | - | chr6_3:91869108-91869127 | None:intergenic | 5.0% |
| !!! | ATATATTTTTTTTATCTATA+TGG | - | chr6_3:91869346-91869365 | None:intergenic | 5.0% |
| !!! | TAAATAATTAATAATTTGTA+AGG | - | chr6_3:91869423-91869442 | None:intergenic | 5.0% |
| ATGAACCTCACGCTGAAGTG+TGG | + | chr6_3:91868501-91868520 | Msa0964840:intron | 50.0% | |
| TCCAATTCCACCCATGCCAA+AGG | - | chr6_3:91868532-91868551 | None:intergenic | 50.0% | |
| GTTGAATCTACTCACCACGG+CGG | + | chr6_3:91868831-91868850 | Msa0964840:intron | 50.0% | |
| GACAAAAACGATGGAGGACC+TGG | + | chr6_3:91869800-91869819 | Msa0964840:CDS | 50.0% | |
| ! | GAGTTCCATTGGCTGCAACA+AGG | - | chr6_3:91869953-91869972 | None:intergenic | 50.0% |
| ! | TTGATGCTTGTTACGGAGGG+GGG | + | chr6_3:91870145-91870164 | Msa0964840:CDS | 50.0% |
| CAGCGTGAGGTTCATGCACA+TGG | - | chr6_3:91868496-91868515 | None:intergenic | 55.0% | |
| CTGAAGTGTGGAGCTGCCTT+TGG | + | chr6_3:91868513-91868532 | Msa0964840:intron | 55.0% | |
| TGTGGAGCTGCCTTTGGCAT+GGG | + | chr6_3:91868519-91868538 | Msa0964840:intron | 55.0% | |
| GCCTTTGGCATGGGTGGAAT+TGG | + | chr6_3:91868528-91868547 | Msa0964840:intron | 55.0% | |
| TCTTGACGCCGTCAGCCATT+TGG | - | chr6_3:91870113-91870132 | None:intergenic | 55.0% | |
| GTGGCATAAAGGTCGGGTAG+TGG | - | chr6_3:91870360-91870379 | None:intergenic | 55.0% | |
| CAGCTCCACACTTCAGCGTG+AGG | - | chr6_3:91868509-91868528 | None:intergenic | 60.0% | |
| GTGTGGAGCTGCCTTTGGCA+TGG | + | chr6_3:91868518-91868537 | Msa0964840:intron | 60.0% | |
| GGAGCTGCCTTTGGCATGGG+TGG | + | chr6_3:91868522-91868541 | Msa0964840:intron | 65.0% | |
| CGATTCTGACGGTACCGCCG+TGG | - | chr6_3:91868848-91868867 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 91868123 | 91870600 | 91868123 | ID=Msa0964840;Name=Msa0964840 |
| chr6_3 | mRNA | 91868123 | 91870600 | 91868123 | ID=Msa0964840-mRNA-1;Parent=Msa0964840;Name=Msa0964840-mRNA-1;_AED=0.23;_eAED=0.23;_QI=128|0|0.2|0.8|0.75|0.8|5|0|204 |
| chr6_3 | exon | 91868123 | 91868273 | 91868123 | ID=Msa0964840-mRNA-1:exon:16630;Parent=Msa0964840-mRNA-1 |
| chr6_3 | exon | 91869658 | 91869887 | 91869658 | ID=Msa0964840-mRNA-1:exon:16631;Parent=Msa0964840-mRNA-1 |
| chr6_3 | exon | 91870085 | 91870301 | 91870085 | ID=Msa0964840-mRNA-1:exon:16632;Parent=Msa0964840-mRNA-1 |
| chr6_3 | exon | 91870414 | 91870503 | 91870414 | ID=Msa0964840-mRNA-1:exon:16633;Parent=Msa0964840-mRNA-1 |
| chr6_3 | exon | 91870546 | 91870600 | 91870546 | ID=Msa0964840-mRNA-1:exon:16634;Parent=Msa0964840-mRNA-1 |
| chr6_3 | five_prime_UTR | 91868123 | 91868250 | 91868123 | ID=Msa0964840-mRNA-1:five_prime_utr;Parent=Msa0964840-mRNA-1 |
| chr6_3 | CDS | 91868251 | 91868273 | 91868251 | ID=Msa0964840-mRNA-1:cds;Parent=Msa0964840-mRNA-1 |
| chr6_3 | CDS | 91869658 | 91869887 | 91869658 | ID=Msa0964840-mRNA-1:cds;Parent=Msa0964840-mRNA-1 |
| chr6_3 | CDS | 91870085 | 91870301 | 91870085 | ID=Msa0964840-mRNA-1:cds;Parent=Msa0964840-mRNA-1 |
| chr6_3 | CDS | 91870414 | 91870503 | 91870414 | ID=Msa0964840-mRNA-1:cds;Parent=Msa0964840-mRNA-1 |
| chr6_3 | CDS | 91870546 | 91870600 | 91870546 | ID=Msa0964840-mRNA-1:cds;Parent=Msa0964840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
