AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1038890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038890 MtrunA17_Chr7g0273281 77.727 440 98 0 22 461 57 496 0.0 719
Msa1038890 MtrunA17_Chr4g0066581 54.605 456 204 2 7 461 34 487 2.29e-178 509
Msa1038890 MtrunA17_Chr7g0273261 97.581 248 4 1 236 483 15 260 1.37e-172 485
Msa1038890 MtrunA17_Chr2g0286721 54.233 437 199 1 26 461 48 484 3.24e-171 491
Msa1038890 MtrunA17_Chr7g0259471 51.835 436 210 0 26 461 39 474 9.09e-158 456
Msa1038890 MtrunA17_Chr7g0259221 53.349 433 202 0 29 461 44 476 2.76e-157 455
Msa1038890 MtrunA17_Chr7g0273271 97.573 206 5 0 1 206 1 206 6.02e-139 398
Msa1038890 MtrunA17_Chr1g0155221 47.111 450 227 3 14 457 41 485 1.20e-138 408
Msa1038890 MtrunA17_Chr8g0373181 45.572 463 246 4 5 461 24 486 5.86e-135 398
Msa1038890 MtrunA17_Chr8g0373191 44.218 441 215 5 27 459 39 456 5.05e-118 354
Msa1038890 MtrunA17_Chr7g0250881 32.359 479 289 11 2 462 43 504 2.09e-69 229
Msa1038890 MtrunA17_Chr6g0457781 33.493 418 252 8 60 461 136 543 2.95e-69 230
Msa1038890 MtrunA17_Chr5g0404191 46.053 228 118 1 15 242 43 265 5.06e-65 212
Msa1038890 MtrunA17_Chr4g0021771 29.668 482 303 9 17 473 45 515 7.90e-61 207
Msa1038890 MtrunA17_Chr4g0039651 30.952 462 281 10 28 459 46 499 3.90e-57 197
Msa1038890 MtrunA17_Chr1g0213631 32.124 386 243 8 87 457 48 429 1.70e-56 194
Msa1038890 MtrunA17_Chr4g0032021 31.486 451 262 13 42 460 119 554 2.52e-56 196
Msa1038890 MtrunA17_Chr1g0213611 31.155 459 278 11 26 457 78 525 3.01e-56 196
Msa1038890 MtrunA17_Chr7g0214451 32.287 446 277 9 32 457 36 476 7.57e-56 194
Msa1038890 MtrunA17_Chr2g0282031 31.350 437 280 7 38 457 64 497 4.60e-55 192
Msa1038890 MtrunA17_Chr6g0486021 28.898 481 312 11 1 464 23 490 4.20e-51 181
Msa1038890 MtrunA17_Chr4g0004821 30.856 444 280 10 38 466 47 478 6.83e-50 177
Msa1038890 MtrunA17_Chr4g0034681 28.414 454 289 9 38 459 41 490 2.73e-47 171
Msa1038890 MtrunA17_Chr3g0144361 25.662 491 329 9 4 463 9 494 1.37e-45 166
Msa1038890 MtrunA17_Chr8g0373531 28.481 474 307 8 38 481 30 501 7.47e-45 164
Msa1038890 MtrunA17_Chr6g0485661 27.803 446 287 9 34 452 65 502 1.51e-44 163
Msa1038890 MtrunA17_Chr5g0432581 27.426 474 305 9 38 477 30 498 6.40e-44 161
Msa1038890 MtrunA17_Chr4g0036021 26.096 456 304 7 38 463 38 490 8.61e-44 161
Msa1038890 MtrunA17_Chr5g0394341 26.981 467 305 8 24 456 19 483 5.33e-41 154
Msa1038890 MtrunA17_Chr3g0119401 28.040 403 270 9 71 461 139 533 3.27e-40 152
Msa1038890 MtrunA17_Chr3g0115721 26.551 403 282 5 67 456 82 483 2.65e-39 149
Msa1038890 MtrunA17_Chr3g0128171 25.604 414 289 6 67 463 36 447 6.54e-38 144
Msa1038890 MtrunA17_Chr3g0078791 26.667 405 260 6 67 456 28 410 7.69e-38 143
Msa1038890 MtrunA17_Chr8g0390141 27.340 406 273 8 67 456 86 485 1.37e-37 144
Msa1038890 MtrunA17_Chr2g0303731 30.409 342 215 8 37 361 36 371 1.71e-37 145
Msa1038890 MtrunA17_Chr2g0303731 38.835 103 62 1 360 461 452 554 5.80e-13 71.2
Msa1038890 MtrunA17_Chr1g0205691 28.040 403 275 5 67 456 83 483 2.17e-37 144
Msa1038890 MtrunA17_Chr3g0128081 26.961 408 275 6 67 456 83 485 2.49e-37 143
Msa1038890 MtrunA17_Chr6g0486681 28.993 407 265 9 67 456 86 485 2.53e-37 143
Msa1038890 MtrunA17_Chr6g0486671 28.993 407 265 9 67 456 86 485 2.53e-37 143
Msa1038890 MtrunA17_Chr4g0065324 26.749 486 306 11 17 463 19 493 3.45e-37 143
Msa1038890 MtrunA17_Chr8g0390261 26.914 405 276 7 67 456 86 485 5.93e-37 142
Msa1038890 MtrunA17_Chr5g0403831 26.737 475 314 7 32 475 36 507 7.97e-37 142
Msa1038890 MtrunA17_Chr4g0048411 28.205 390 263 5 83 457 99 486 1.30e-36 141
Msa1038890 MtrunA17_Chr3g0085971 28.537 410 268 8 67 457 82 485 1.34e-36 141
Msa1038890 MtrunA17_Chr3g0115741 25.248 404 286 4 67 456 85 486 2.63e-36 140
Msa1038890 MtrunA17_Chr8g0390521 25.474 475 315 10 13 457 3 468 2.75e-36 140
Msa1038890 MtrunA17_Chr1g0205681 25.263 475 311 10 24 460 20 488 5.30e-36 139
Msa1038890 MtrunA17_Chr5g0417611 25.845 414 288 6 67 463 84 495 8.88e-36 139
Msa1038890 MtrunA17_Chr5g0420841 26.115 471 302 10 27 457 21 485 9.95e-36 139
Msa1038890 MtrunA17_Chr3g0121674 33.216 283 175 7 184 456 4 282 1.23e-35 134
Msa1038890 MtrunA17_Chr4g0065311 25.427 468 301 10 27 456 21 478 1.90e-35 137
Msa1038890 MtrunA17_Chr1g0205671 25.310 403 286 5 67 456 83 483 2.01e-35 137
Msa1038890 MtrunA17_Chr3g0115781 24.691 405 289 4 67 457 84 486 3.33e-35 137
Msa1038890 MtrunA17_Chr3g0115751 26.290 407 278 7 67 456 87 488 1.17e-34 135
Msa1038890 MtrunA17_Chr2g0290181 27.954 347 225 6 27 351 27 370 1.91e-34 136
Msa1038890 MtrunA17_Chr2g0290181 36.792 106 62 3 359 461 454 557 1.11e-11 67.0
Msa1038890 MtrunA17_Chr3g0078971 25.268 467 314 9 24 457 20 484 2.32e-34 135
Msa1038890 MtrunA17_Chr4g0048051 28.244 393 257 7 83 456 99 485 5.62e-34 134
Msa1038890 MtrunA17_Chr3g0115711 24.378 402 291 5 67 456 82 482 8.23e-33 130
Msa1038890 MtrunA17_Chr5g0404181 45.736 129 62 2 339 461 6 132 1.13e-32 120
Msa1038890 MtrunA17_Chr2g0303701 29.861 288 185 6 87 363 89 370 1.41e-32 130
Msa1038890 MtrunA17_Chr5g0445601 25.641 468 306 9 24 456 24 484 8.88e-32 127
Msa1038890 MtrunA17_Chr8g0376611 30.104 289 189 4 76 351 11 299 1.49e-31 127
Msa1038890 MtrunA17_Chr8g0376611 40.777 103 60 1 360 461 382 484 8.73e-14 73.6
Msa1038890 MtrunA17_Chr1g0164851 26.290 407 278 7 67 457 84 484 5.47e-31 125
Msa1038890 MtrunA17_Chr1g0164871 26.044 407 279 7 67 457 84 484 8.18e-31 125
Msa1038890 MtrunA17_Chr7g0257631 26.303 403 276 7 69 456 122 518 1.14e-29 122
Msa1038890 MtrunA17_Chr3g0078991 24.411 467 319 9 24 457 20 485 2.33e-29 120
Msa1038890 MtrunA17_Chr8g0376601 29.066 289 185 6 87 361 89 371 5.54e-29 120
Msa1038890 MtrunA17_Chr8g0376601 43.478 92 51 1 360 450 450 541 3.79e-12 68.6
Msa1038890 MtrunA17_Chr8g0376631 29.773 309 199 6 37 328 36 343 2.82e-28 118
Msa1038890 MtrunA17_Chr8g0376631 40.187 107 55 2 360 461 451 553 7.50e-13 70.9
Msa1038890 MtrunA17_Chr5g0437021 26.044 407 279 7 67 457 84 484 5.47e-28 116
Msa1038890 MtrunA17_Chr3g0115731 25.436 287 205 3 178 456 177 462 5.55e-26 110
Msa1038890 MtrunA17_Chr7g0221631 64.706 68 24 0 360 427 50 117 1.50e-25 100
Msa1038890 MtrunA17_Chr4g0065351 26.687 326 220 7 145 456 1 321 1.41e-24 104
Msa1038890 MtrunA17_Chr2g0290161 26.910 301 177 7 85 371 21 292 9.74e-24 103
Msa1038890 MtrunA17_Chr3g0146061 32.558 215 128 4 254 454 510 721 5.56e-22 99.8
Msa1038890 MtrunA17_Chr3g0146061 37.267 161 86 3 75 224 54 210 5.58e-16 80.9
Msa1038890 MtrunA17_Chr8g0370151 32.569 218 126 5 253 454 130 342 1.61e-21 95.9
Msa1038890 MtrunA17_Chr3g0144261 35.135 185 112 3 55 232 32 215 3.50e-21 97.1
Msa1038890 MtrunA17_Chr3g0144261 31.604 212 120 5 261 454 507 711 2.89e-19 91.3
Msa1038890 MtrunA17_Chr5g0419321 32.547 212 118 4 261 454 525 729 4.22e-21 97.1
Msa1038890 MtrunA17_Chr5g0419321 30.814 172 111 3 68 232 75 245 3.97e-17 84.3
Msa1038890 MtrunA17_Chr5g0407441 31.250 208 126 3 261 454 499 703 1.16e-20 95.5
Msa1038890 MtrunA17_Chr5g0407441 27.928 222 148 5 27 238 4 223 5.23e-17 84.0
Msa1038890 MtrunA17_Chr5g0434261 27.010 311 172 11 184 450 4 303 3.63e-17 82.4
Msa1038890 MtrunA17_Chr7g0259451 64.000 50 18 0 376 425 1 50 1.92e-16 73.2
Msa1038890 MtrunA17_Chr5g0434231 29.268 164 96 2 71 233 9 153 4.05e-15 72.8
Msa1038890 MtrunA17_Chr5g0434251 39.806 103 61 1 360 461 38 140 1.24e-13 68.6
Msa1038890 MtrunA17_Chr2g0319001 24.336 452 265 20 57 474 119 527 5.02e-12 68.2
Msa1038890 MtrunA17_Chr5g0446681 33.621 116 77 0 51 166 30 145 5.19e-12 66.6
Msa1038890 MtrunA17_Chr8g0370141 26.341 205 127 5 64 244 40 244 1.64e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038890 AT1G54730.2 67.550 453 147 0 9 461 14 466 0.0 612
Msa1038890 AT1G54730.5 63.355 453 145 1 9 461 14 445 0.0 560
Msa1038890 AT1G54730.3 67.221 421 138 0 9 429 14 434 0.0 558
Msa1038890 AT1G54730.4 62.708 421 136 1 9 429 14 413 4.24e-178 506
Msa1038890 AT1G54730.9 66.841 383 127 0 9 391 14 396 3.21e-175 498
Msa1038890 AT1G54730.7 66.841 383 127 0 9 391 14 396 3.21e-175 498
Msa1038890 AT2G48020.2 52.597 462 217 1 3 462 2 463 1.51e-173 496
Msa1038890 AT2G48020.1 52.597 462 217 1 3 462 2 463 1.51e-173 496
Msa1038890 AT5G18840.1 53.468 447 207 1 16 461 33 479 2.64e-165 476
Msa1038890 AT1G08930.1 49.776 446 224 0 16 461 47 492 1.88e-156 454
Msa1038890 AT1G08930.2 49.776 446 224 0 16 461 47 492 1.88e-156 454
Msa1038890 AT1G54730.8 61.880 383 125 1 9 391 14 375 1.98e-155 447
Msa1038890 AT3G05165.3 47.672 451 236 0 11 461 14 464 4.84e-153 444
Msa1038890 AT3G05165.2 47.672 451 236 0 11 461 14 464 4.84e-153 444
Msa1038890 AT3G05165.1 47.672 451 236 0 11 461 14 464 4.84e-153 444
Msa1038890 AT1G08920.1 50.000 440 220 0 24 463 29 468 1.01e-152 443
Msa1038890 AT5G27360.1 47.884 449 234 0 12 460 20 468 1.55e-152 443
Msa1038890 AT3G05160.1 47.450 451 237 0 11 461 5 455 1.59e-152 442
Msa1038890 AT5G27360.3 47.884 449 234 0 12 460 68 516 5.55e-152 443
Msa1038890 AT1G08920.2 49.217 447 220 1 24 463 29 475 1.28e-150 438
Msa1038890 AT3G05150.1 50.111 449 219 2 13 460 25 469 1.67e-150 437
Msa1038890 AT3G05150.3 50.111 449 219 2 13 460 25 469 1.67e-150 437
Msa1038890 AT3G05150.2 50.111 449 219 2 13 460 25 469 2.44e-150 438
Msa1038890 AT3G05400.1 47.973 444 231 0 16 459 15 458 1.18e-149 435
Msa1038890 AT5G27350.1 48.330 449 232 0 12 460 16 464 1.21e-149 436
Msa1038890 AT1G08900.1 49.115 452 229 1 9 460 8 458 1.58e-149 435
Msa1038890 AT1G08900.2 49.115 452 229 1 9 460 8 458 1.58e-149 435
Msa1038890 AT3G20460.1 47.312 465 239 2 2 461 24 487 3.40e-149 435
Msa1038890 AT1G54730.11 65.741 324 111 0 9 332 14 337 2.88e-145 419
Msa1038890 AT1G08890.1 49.554 448 222 3 16 460 14 460 2.82e-144 422
Msa1038890 AT3G05160.3 48.889 405 207 0 57 461 2 406 1.55e-143 417
Msa1038890 AT3G05160.2 48.889 405 207 0 57 461 2 406 1.55e-143 417
Msa1038890 AT4G04760.1 47.945 438 225 1 24 458 28 465 2.50e-142 417
Msa1038890 AT3G05155.1 45.671 462 247 2 1 461 1 459 4.00e-142 416
Msa1038890 AT1G08900.3 47.788 452 227 2 9 460 8 450 9.74e-142 415
Msa1038890 AT4G04750.1 47.672 451 234 1 13 461 22 472 2.12e-141 415
Msa1038890 AT4G04750.2 47.672 451 234 1 13 461 22 472 2.12e-141 415
Msa1038890 AT4G04750.3 47.672 451 234 1 13 461 66 516 4.89e-141 416
Msa1038890 AT1G08900.5 49.275 414 210 0 47 460 3 416 2.73e-140 410
Msa1038890 AT3G05400.2 45.946 444 220 1 16 459 15 438 1.71e-138 406
Msa1038890 AT3G05165.6 46.667 420 224 0 11 430 14 433 1.25e-137 406
Msa1038890 AT4G04760.3 49.257 404 202 1 58 458 3 406 1.15e-134 395
Msa1038890 AT1G08920.3 49.005 402 205 0 24 425 29 430 4.61e-134 395
Msa1038890 AT1G08900.4 47.722 417 217 1 9 425 8 423 4.49e-132 389
Msa1038890 AT1G19450.1 45.495 455 226 5 15 458 42 485 3.77e-131 389
Msa1038890 AT1G54730.10 64.667 300 106 0 9 308 14 313 1.10e-129 379
Msa1038890 AT1G54730.6 64.667 300 106 0 9 308 14 313 1.10e-129 379
Msa1038890 AT4G04760.2 46.136 440 227 3 24 458 28 462 1.16e-129 385
Msa1038890 AT1G75220.1 45.133 452 232 4 15 458 41 484 3.11e-129 384
Msa1038890 AT3G05165.4 46.059 406 219 0 11 416 14 419 1.30e-128 382
Msa1038890 AT3G05165.5 46.059 406 219 0 11 416 14 419 1.30e-128 382
Msa1038890 AT5G27360.2 49.176 364 185 0 97 460 1 364 1.42e-127 375
Msa1038890 AT5G27360.5 49.176 364 185 0 97 460 1 364 1.42e-127 375
Msa1038890 AT2G48020.4 50.847 354 172 1 16 367 15 368 3.42e-123 365
Msa1038890 AT5G27360.4 41.527 419 228 1 12 430 20 421 3.45e-114 343
Msa1038890 AT2G48020.3 52.050 317 150 1 16 330 15 331 1.35e-111 334
Msa1038890 AT3G05155.2 46.667 315 165 1 15 329 15 326 2.13e-95 291
Msa1038890 AT5G16150.2 34.772 417 248 9 60 461 136 543 2.34e-65 220
Msa1038890 AT5G16150.1 34.772 417 248 9 60 461 136 543 2.34e-65 220
Msa1038890 AT5G16150.3 34.772 417 248 9 60 461 136 543 2.34e-65 220
Msa1038890 AT3G03090.1 31.788 453 271 11 37 459 57 501 1.60e-55 193
Msa1038890 AT5G17010.1 31.828 443 264 12 43 459 71 501 2.56e-54 190
Msa1038890 AT5G17010.3 31.828 443 264 12 43 459 71 501 2.56e-54 190
Msa1038890 AT5G17010.4 31.828 443 264 12 43 459 71 501 2.56e-54 190
Msa1038890 AT5G59250.1 31.313 495 290 13 4 460 74 556 9.02e-54 189
Msa1038890 AT2G20780.1 30.206 437 283 6 38 457 66 497 1.15e-52 186
Msa1038890 AT2G43330.1 31.739 460 272 13 26 457 31 476 3.20e-52 184
Msa1038890 AT2G20780.2 30.969 423 266 8 55 457 23 439 3.62e-52 183
Msa1038890 AT1G67300.2 31.151 443 283 10 32 460 56 490 1.35e-50 180
Msa1038890 AT1G67300.1 31.236 445 279 10 32 460 56 489 3.52e-50 179
Msa1038890 AT1G67300.3 31.236 445 279 10 32 460 56 489 3.52e-50 179
Msa1038890 AT1G05030.2 29.557 406 271 6 71 467 73 472 3.53e-47 170
Msa1038890 AT1G05030.1 29.557 406 271 6 71 467 125 524 3.55e-47 171
Msa1038890 AT3G18830.1 26.749 486 305 10 38 476 47 528 2.38e-46 169
Msa1038890 AT1G79820.2 29.955 444 272 9 38 460 65 490 6.28e-45 164
Msa1038890 AT1G79820.1 29.955 444 272 9 38 460 65 490 6.28e-45 164
Msa1038890 AT2G18480.1 27.964 447 290 6 41 457 36 480 8.29e-44 161
Msa1038890 AT2G16120.1 26.483 472 310 8 38 476 37 504 2.92e-43 160
Msa1038890 AT4G36670.1 26.991 452 297 8 38 458 28 477 3.41e-43 159
Msa1038890 AT2G16130.1 26.652 469 306 8 38 473 37 500 4.06e-43 160
Msa1038890 AT1G67300.6 31.026 390 243 9 32 406 56 434 1.47e-41 154
Msa1038890 AT1G67300.7 31.026 390 243 9 32 406 56 434 1.47e-41 154
Msa1038890 AT1G67300.4 30.809 383 239 9 32 399 56 427 7.61e-39 146
Msa1038890 AT1G67300.5 30.809 383 239 9 32 399 56 427 7.61e-39 146
Msa1038890 AT5G26340.1 26.511 513 316 11 24 481 20 526 4.69e-38 146
Msa1038890 AT5G26250.1 28.325 406 276 6 67 460 81 483 7.93e-38 145
Msa1038890 AT1G11260.1 26.059 472 304 9 24 456 20 485 9.82e-38 145
Msa1038890 AT1G79820.4 30.390 385 240 8 38 407 65 436 9.92e-38 144
Msa1038890 AT3G05960.1 28.186 408 274 8 67 460 80 482 1.17e-35 139
Msa1038890 AT4G21480.1 27.764 407 273 7 67 457 83 484 4.27e-35 137
Msa1038890 AT1G77210.2 27.475 404 275 8 67 456 86 485 9.85e-35 136
Msa1038890 AT1G77210.1 27.475 404 275 8 67 456 86 485 9.85e-35 136
Msa1038890 AT1G50310.1 25.369 406 283 7 67 456 85 486 3.24e-34 135
Msa1038890 AT4G02050.2 25.370 473 315 8 17 456 17 484 1.46e-33 133
Msa1038890 AT4G02050.1 25.370 473 315 8 17 456 17 484 1.46e-33 133
Msa1038890 AT3G19940.1 25.248 404 285 7 67 456 85 485 3.63e-33 132
Msa1038890 AT5G23270.1 26.087 414 270 9 67 456 85 486 1.09e-31 127
Msa1038890 AT2G35740.1 29.268 287 179 6 71 336 73 356 1.26e-31 128
Msa1038890 AT2G35740.1 36.893 103 64 1 360 461 458 560 1.73e-12 70.1
Msa1038890 AT1G79820.3 28.211 436 242 10 38 460 65 442 1.44e-31 126
Msa1038890 AT5G61520.2 26.500 400 279 7 69 456 43 439 5.27e-31 125
Msa1038890 AT3G19930.1 25.490 408 282 8 67 457 82 484 7.92e-31 125
Msa1038890 AT3G19930.2 25.490 408 282 8 67 457 82 484 7.92e-31 125
Msa1038890 AT1G30220.1 29.603 277 180 5 89 351 93 368 8.21e-31 125
Msa1038890 AT1G30220.1 36.893 103 64 1 360 461 455 557 7.33e-13 71.2
Msa1038890 AT5G61520.1 26.500 400 279 7 69 456 91 487 1.24e-30 124
Msa1038890 AT5G17010.2 27.681 401 207 9 76 459 104 438 1.49e-30 123
Msa1038890 AT1G34580.2 26.316 399 275 6 69 450 35 431 1.71e-29 120
Msa1038890 AT1G34580.1 25.926 405 281 6 69 456 85 487 1.99e-29 121
Msa1038890 AT4G16480.2 25.824 364 238 7 24 358 24 384 2.11e-29 122
Msa1038890 AT4G16480.2 35.922 103 65 1 360 461 459 561 1.47e-12 70.5
Msa1038890 AT4G16480.3 25.824 364 238 7 24 358 24 384 2.11e-29 122
Msa1038890 AT4G16480.3 35.922 103 65 1 360 461 459 561 1.47e-12 70.5
Msa1038890 AT4G16480.1 25.824 364 238 7 24 358 24 384 2.11e-29 122
Msa1038890 AT4G16480.1 35.922 103 65 1 360 461 459 561 1.47e-12 70.5
Msa1038890 AT1G07340.1 26.446 484 306 12 14 456 7 481 3.54e-29 120
Msa1038890 AT1G77210.3 27.928 333 222 8 138 456 8 336 1.42e-28 116
Msa1038890 AT1G50310.2 24.251 334 233 7 139 456 14 343 6.54e-26 109
Msa1038890 AT1G79820.5 26.685 356 184 8 120 460 87 380 3.20e-24 104
Msa1038890 AT4G35300.5 33.810 210 118 4 261 454 319 523 6.97e-22 99.0
Msa1038890 AT4G35300.9 33.810 210 118 4 261 454 506 710 1.33e-21 99.0
Msa1038890 AT4G35300.9 36.364 165 97 4 75 232 54 217 5.86e-17 84.3
Msa1038890 AT4G35300.2 33.810 210 118 4 261 454 506 710 1.33e-21 99.0
Msa1038890 AT4G35300.2 36.364 165 97 4 75 232 54 217 5.86e-17 84.3
Msa1038890 AT4G35300.3 33.810 210 118 4 261 454 506 710 1.33e-21 99.0
Msa1038890 AT4G35300.3 36.364 165 97 4 75 232 54 217 5.86e-17 84.3
Msa1038890 AT4G35300.4 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1038890 AT4G35300.4 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1038890 AT4G35300.8 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1038890 AT4G35300.8 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1038890 AT4G35300.6 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1038890 AT4G35300.6 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1038890 AT4G35300.11 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1038890 AT4G35300.11 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1038890 AT4G35300.1 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1038890 AT4G35300.1 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1038890 AT4G35300.10 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1038890 AT4G35300.10 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1038890 AT4G35300.7 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1038890 AT4G35300.7 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1038890 AT3G51490.3 32.093 215 115 5 261 454 460 664 4.14e-21 97.1
Msa1038890 AT3G51490.3 34.545 165 100 3 75 232 4 167 4.23e-18 87.8
Msa1038890 AT3G51490.2 32.093 215 115 5 261 454 510 714 4.49e-21 97.1
Msa1038890 AT3G51490.2 34.545 165 100 3 75 232 54 217 5.59e-18 87.4
Msa1038890 AT1G20840.2 29.437 231 155 3 29 252 6 235 4.19e-20 94.4
Msa1038890 AT1G20840.2 31.731 208 125 3 261 454 509 713 7.81e-19 90.1
Msa1038890 AT1G20840.1 29.437 231 155 3 29 252 6 235 4.19e-20 94.4
Msa1038890 AT1G20840.1 31.731 208 125 3 261 454 509 713 7.81e-19 90.1
Msa1038890 AT1G54730.1 66.129 62 21 0 78 139 1 62 9.65e-20 83.6
Msa1038890 AT3G51490.1 33.645 214 105 6 261 454 510 706 1.33e-18 89.4
Msa1038890 AT3G51490.1 34.545 165 100 3 75 232 54 217 4.81e-18 87.8
Msa1038890 AT5G43340.1 22.697 445 268 15 76 462 81 507 1.42e-11 67.0

Find 139 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGATACACAGATGCTTTA+AGG 0.115007 7_1:-75868641 None:intergenic
GTATCACTAACTTATCTTAT+TGG 0.226585 7_1:+75870232 Msa1038890:CDS
TTGTTCACTGGTTGTGTTCT+TGG 0.226899 7_1:+75872401 Msa1038890:CDS
GTTATTTCAGCTATATAAAT+TGG 0.231757 7_1:-75869997 None:intergenic
TGCTATTGTTCCAATACTTC+TGG 0.234236 7_1:-75871427 None:intergenic
TGACAGCTAATGATTTGTTT+TGG 0.245772 7_1:+75870208 Msa1038890:intron
TATGCATGCAATTCTGTTAC+AGG 0.251586 7_1:-75872770 None:intergenic
TTTCTTCAATTGGAGGCTTT+TGG 0.270890 7_1:+75870258 Msa1038890:CDS
ATATGCAGGACTTGCATAAA+TGG 0.275987 7_1:+75871883 Msa1038890:intron
TTGTGAATGAAAACAGAATA+TGG 0.285794 7_1:-75872866 None:intergenic
TTGTTGGATACTGTCTGATA+TGG 0.318096 7_1:-75872725 None:intergenic
CCATTTCTTAAAATATTACT+TGG 0.321078 7_1:-75872799 None:intergenic
AATAGCAATGGTTGTTGTTC+AGG 0.339658 7_1:+75871443 Msa1038890:CDS
TGCCAAATTCATCTCTTTGT+TGG 0.339996 7_1:-75872741 None:intergenic
ATCCAACAAAGAGATGAATT+TGG 0.340305 7_1:+75872739 Msa1038890:CDS
TATGTTGGAAGACTATTGTT+AGG 0.345071 7_1:+75869844 Msa1038890:CDS
GAAGGAATTCAGTCCCATTC+TGG 0.348944 7_1:+75871905 Msa1038890:CDS
TCCGAGCTATGTTGCATCTT+GGG 0.361851 7_1:+75869581 Msa1038890:CDS
TTATTGGAGCTTTCTTCAAT+TGG 0.366601 7_1:+75870248 Msa1038890:CDS
CAAACTGTTGTAGTATTATC+AGG 0.367972 7_1:-75871106 None:intergenic
CTCCGAGCTATGTTGCATCT+TGG 0.368885 7_1:+75869580 Msa1038890:CDS
ACCACCCTTGCTGCTGTCTC+TGG 0.374172 7_1:+75868784 Msa1038890:CDS
ATAGATCCCAATGACAGCTT+TGG 0.374563 7_1:+75871595 Msa1038890:intron
AGCAGAACCCTTCACATTGA+TGG 0.376678 7_1:-75872362 None:intergenic
TGGATGGTGTAGAAAGGTTC+AGG 0.382863 7_1:+75872829 Msa1038890:three_prime_UTR
TTTGGTTCAATACTAACAAT+TGG 0.384921 7_1:+75869394 Msa1038890:CDS
CCTAGGAGACTCGGGAATAA+AGG 0.388063 7_1:-75870412 None:intergenic
AATCCACTTTACAGCACCTT+AGG 0.388303 7_1:+75870767 Msa1038890:CDS
TATTCATCCCCTGCTCAATC+TGG 0.389787 7_1:+75868940 Msa1038890:CDS
ATTACTCCCAAAGCTGTCAT+TGG 0.396470 7_1:-75871602 None:intergenic
TTGGAGCTTTCTTCAATTGG+AGG 0.396577 7_1:+75870251 Msa1038890:CDS
TTCTTCTAGCGTACGCCCCT+TGG 0.400544 7_1:-75872684 None:intergenic
CAACAGTTTGGCGGAGTTAA+CGG 0.405022 7_1:+75871119 Msa1038890:CDS
TAAAATGAAGTGAAATGAAA+AGG 0.405480 7_1:-75868574 None:intergenic
TAGATCCCAATGACAGCTTT+GGG 0.408715 7_1:+75871596 Msa1038890:intron
AAATGAGTGTATATGATTGC+GGG 0.408976 7_1:-75868530 None:intergenic
GCAGGCAAAGGTTGGTCGCT+TGG 0.414342 7_1:+75870735 Msa1038890:intron
TCTGGCACTCGTCGGTGTAC+TGG 0.423682 7_1:+75871923 Msa1038890:CDS
CATAATAATCAGGTATATAC+AGG 0.427901 7_1:+75872194 Msa1038890:intron
AGTTCTATATTTGTCTCTGC+TGG 0.432640 7_1:+75871158 Msa1038890:CDS
GAGATTCACTGCAGTTCATC+AGG 0.433725 7_1:+75870038 Msa1038890:CDS
GAATCTCCCTCGAAGATCCT+TGG 0.434230 7_1:-75870022 None:intergenic
GCTTTAAGGTTATGAAGAGT+AGG 0.438635 7_1:-75868627 None:intergenic
ATCACAGATGACCTTGATCT+TGG 0.439414 7_1:+75868964 Msa1038890:CDS
GCTTTGTTACATTTGTTCAC+TGG 0.446450 7_1:+75872389 Msa1038890:CDS
AAAATGAAGTGAAATGAAAA+GGG 0.450699 7_1:-75868573 None:intergenic
AGCGTACGCCCCTTGGTCTC+TGG 0.452619 7_1:-75872677 None:intergenic
CCTTTATTCCCGAGTCTCCT+AGG 0.455469 7_1:+75870412 Msa1038890:CDS
ATCAATGTGAAGGGTTCTGC+TGG 0.456001 7_1:+75872364 Msa1038890:CDS
AATCTCCCTCGAAGATCCTT+GGG 0.474385 7_1:-75870021 None:intergenic
CATTCGCGAAGAAGCTAGTT+CGG 0.477966 7_1:+75868738 Msa1038890:CDS
ATTAGTGAAGACGCCAGCTT+GGG 0.478480 7_1:+75868388 None:intergenic
TAATCTGAAACGATTGGCAT+TGG 0.480734 7_1:-75868474 None:intergenic
ATCCACTTTACAGCACCTTA+GGG 0.481918 7_1:+75870768 Msa1038890:CDS
TCCCGAGTCTCCTAGGTGGC+TGG 0.483351 7_1:+75870419 Msa1038890:CDS
TTCATATTCTCTAGCATCTG+TGG 0.483621 7_1:+75872623 Msa1038890:CDS
CTGATAATACTACAACAGTT+TGG 0.484038 7_1:+75871107 Msa1038890:CDS
TCCCCTAAGGTGCTGTAAAG+TGG 0.493199 7_1:-75870770 None:intergenic
TTACTCCCAAAGCTGTCATT+GGG 0.497965 7_1:-75871601 None:intergenic
TCTGCATCAGGAACATGCTT+AGG 0.498862 7_1:+75871742 Msa1038890:CDS
CTCATGAGTTGGAATTCAGC+AGG 0.499619 7_1:+75872448 Msa1038890:CDS
CACCAGCCACCTAGGAGACT+CGG 0.501397 7_1:-75870421 None:intergenic
TCACATTGTTAGGTAGGAGT+TGG 0.508953 7_1:+75871083 Msa1038890:intron
ATTATACAGATCTCTGCATC+AGG 0.511602 7_1:+75871730 Msa1038890:intron
AAAATGAGTGTATATGATTG+CGG 0.511891 7_1:-75868531 None:intergenic
AGCTATGTTGCATCTTGGGA+TGG 0.514867 7_1:+75869585 Msa1038890:CDS
GAATAGCACCATGCTCGAAA+AGG 0.516455 7_1:+75872894 Msa1038890:three_prime_UTR
TTTGTTTGAAGGTTGCTTGG+TGG 0.518629 7_1:+75869818 Msa1038890:intron
GAATGTTGATATTTCTGAAG+AGG 0.522673 7_1:+75870795 Msa1038890:CDS
GATATTTCCCATCAATGTGA+AGG 0.523629 7_1:+75872354 Msa1038890:intron
AGGATCTTTCTCACTTGGCA+TGG 0.525035 7_1:+75872214 Msa1038890:CDS
TATCAACATTCTTTCCCCTA+AGG 0.526789 7_1:-75870783 None:intergenic
CCTCGGCTACGCCAAGATCA+AGG 0.526814 7_1:-75868975 None:intergenic
CTATTGTTAGGATGTGGAAT+GGG 0.527075 7_1:+75869856 Msa1038890:CDS
TTGGCATGGGAGGAATACCC+TGG 0.527653 7_1:+75872228 Msa1038890:CDS
GCAGAACCCTTCACATTGAT+GGG 0.528455 7_1:-75872361 None:intergenic
GTTGCTTGGTGGCTTTATGT+TGG 0.534213 7_1:+75869829 Msa1038890:CDS
TATACAGGATCTTTCTCACT+TGG 0.535412 7_1:+75872209 Msa1038890:CDS
AATTTGATGTTATAGGCCAT+GGG 0.537100 7_1:+75869554 Msa1038890:intron
TCTTTCTCACTTGGCATGGG+AGG 0.540414 7_1:+75872218 Msa1038890:CDS
CTCAGAAGCTGTGCAAGACA+TGG 0.541760 7_1:-75870384 None:intergenic
GGATCTTTCTCACTTGGCAT+GGG 0.542222 7_1:+75872215 Msa1038890:CDS
CAAAGGTTGGTCGCTTGGAA+AGG 0.543452 7_1:+75870740 Msa1038890:CDS
AACGTTAAGAGCTCCCAAGC+TGG 0.545488 7_1:-75868401 None:intergenic
ATTGTTCTGCAGGCAAAGGT+TGG 0.546143 7_1:+75870727 Msa1038890:intron
TCCCAAGATGCAACATAGCT+CGG 0.546662 7_1:-75869582 None:intergenic
CGAACTAGCTTCTTCGCGAA+TGG 0.550047 7_1:-75868737 None:intergenic
GATTAGTGAAGACGCCAGCT+TGG 0.550708 7_1:+75868387 None:intergenic
ACCAGAGACAGCAGCAAGGG+TGG 0.550981 7_1:-75868785 None:intergenic
ACTATTGTTAGGATGTGGAA+TGG 0.552813 7_1:+75869855 Msa1038890:CDS
ACACCGACGAGTGCCAGAAT+GGG 0.557562 7_1:-75871918 None:intergenic
AGAACCAGAGACAGCAGCAA+GGG 0.561286 7_1:-75868788 None:intergenic
TCTGTGATTCCAGATTGAGC+AGG 0.562147 7_1:-75868949 None:intergenic
TGCTAAACTACCACTTACAA+TGG 0.563786 7_1:-75869431 None:intergenic
CCTTGATCTTGGCGTAGCCG+AGG 0.564032 7_1:+75868975 Msa1038890:CDS
AATACTAACAATTGGAGCGA+TGG 0.564654 7_1:+75869402 Msa1038890:CDS
CTAACAATTGGAGCGATGGT+TGG 0.566895 7_1:+75869406 Msa1038890:CDS
TGCTCTCAGATCAACCGCTA+GGG 0.574288 7_1:-75872964 None:intergenic
GCTTGCCATTGCAGTCTCAA+AGG 0.575081 7_1:+75869607 Msa1038890:CDS
GGTAGTTTAGCAGATTATGC+AGG 0.575653 7_1:+75869442 Msa1038890:CDS
ATTACATACTCTAATTTCAG+TGG 0.575662 7_1:-75870818 None:intergenic
GGAAGACTATTGTTAGGATG+TGG 0.575864 7_1:+75869850 Msa1038890:CDS
CTGTGATTCCAGATTGAGCA+GGG 0.578238 7_1:-75868948 None:intergenic
AGCTTCTGTTTGCTGCTGAG+AGG 0.578800 7_1:-75870950 None:intergenic
ACCAGCCACCTAGGAGACTC+GGG 0.581675 7_1:-75870420 None:intergenic
GCAGGACTTGCATAAATGGA+AGG 0.583428 7_1:+75871887 Msa1038890:intron
AATGGGTATTCTATCATATG+TGG 0.590029 7_1:+75869873 Msa1038890:CDS
ACCTCAGACATTATAACCCA+GGG 0.595175 7_1:-75872245 None:intergenic
ATATTTCCCATCAATGTGAA+GGG 0.595917 7_1:+75872355 Msa1038890:CDS
ATAATACTACAACAGTTTGG+CGG 0.603039 7_1:+75871110 Msa1038890:CDS
AAGAAATGGTATATGATGGA+TGG 0.604160 7_1:+75872813 Msa1038890:three_prime_UTR
ATAACACCCAAGGATCTTCG+AGG 0.605899 7_1:+75870015 Msa1038890:CDS
ATGGTTGGTGCCATTGTAAG+TGG 0.607976 7_1:+75869421 Msa1038890:CDS
TACCTCAGACATTATAACCC+AGG 0.616486 7_1:-75872246 None:intergenic
GTAAGTATAAGAATACTAGT+TGG 0.617323 7_1:-75868763 None:intergenic
TAAATACTATGAATAGAACA+AGG 0.621012 7_1:+75872937 Msa1038890:three_prime_UTR
AGTCCCATTCTGGCACTCGT+CGG 0.621294 7_1:+75871915 Msa1038890:CDS
GAACAACTCACCAGCCACCT+AGG 0.622122 7_1:-75870429 None:intergenic
ATATGATGGATGGTGTAGAA+AGG 0.626545 7_1:+75872823 Msa1038890:three_prime_UTR
AACTAGTACCAGAGACCAAG+GGG 0.634126 7_1:+75872669 Msa1038890:CDS
CTGCTGAATTCCAACTCATG+AGG 0.635484 7_1:-75872447 None:intergenic
TATAGCTGAAATAACACCCA+AGG 0.637527 7_1:+75870005 Msa1038890:CDS
ACATAGCTCGGAGAATCCCA+TGG 0.638278 7_1:-75869570 None:intergenic
ATTATGTAATCTGAAACGAT+TGG 0.639796 7_1:-75868480 None:intergenic
AAGTATTGGAACAATAGCAA+TGG 0.641668 7_1:+75871431 Msa1038890:CDS
AGTTACCTTTGAGACTGCAA+TGG 0.641960 7_1:-75869612 None:intergenic
AAAACTAGTACCAGAGACCA+AGG 0.643814 7_1:+75872667 Msa1038890:CDS
AAAAGAATGACAGAGATACA+AGG 0.644048 7_1:-75871771 None:intergenic
AAGAACCAGAGACAGCAGCA+AGG 0.646758 7_1:-75868789 None:intergenic
ACCCTGGGTTATAATGTCTG+AGG 0.647294 7_1:+75872244 Msa1038890:CDS
TGGCATGGGAGGAATACCCT+GGG 0.647522 7_1:+75872229 Msa1038890:CDS
AAACTAGTACCAGAGACCAA+GGG 0.649846 7_1:+75872668 Msa1038890:CDS
TTGCTACAAATAGAATGGTG+AGG 0.651966 7_1:-75872646 None:intergenic
TCCACTTTACAGCACCTTAG+GGG 0.658562 7_1:+75870769 Msa1038890:CDS
TAACACCCAAGGATCTTCGA+GGG 0.664630 7_1:+75870016 Msa1038890:CDS
TTATTCCCGAGTCTCCTAGG+TGG 0.689625 7_1:+75870415 Msa1038890:CDS
TGTGATTCCAGATTGAGCAG+GGG 0.720230 7_1:-75868947 None:intergenic
AAATACTATGAATAGAACAA+GGG 0.721223 7_1:+75872938 Msa1038890:three_prime_UTR
TAGAACAAGGGTATCCCTAG+CGG 0.723866 7_1:+75872950 Msa1038890:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTATTAAATATGGAAA+TGG - chr7_1:75869650-75869669 None:intergenic 10.0%
!! GTACTCAAATTTATTAAATA+TGG - chr7_1:75869656-75869675 None:intergenic 15.0%
!! TTAATAAATTTGAGTACATT+AGG + chr7_1:75869659-75869678 Msa1038890:intron 15.0%
!!! GATTTTTATTTCTTTATTTC+AGG + chr7_1:75870354-75870373 Msa1038890:intron 15.0%
!! ATAATGATTTGAAAAAATAG+AGG + chr7_1:75870617-75870636 Msa1038890:intron 15.0%
!!! TAAAAATATGTTACACTTTT+AGG - chr7_1:75870899-75870918 None:intergenic 15.0%
!!! TTAATGTATTATTTTTTACC+AGG + chr7_1:75872593-75872612 Msa1038890:intron 15.0%
!! AAAATGAAGTGAAATGAAAA+GGG - chr7_1:75868576-75868595 None:intergenic 20.0%
!! TAAAATGAAGTGAAATGAAA+AGG - chr7_1:75868577-75868596 None:intergenic 20.0%
!!! TTCTCATTTACATCATTTTT+TGG + chr7_1:75868834-75868853 Msa1038890:intron 20.0%
!! AACTTATTTATCGATATTGT+TGG + chr7_1:75869033-75869052 Msa1038890:intron 20.0%
!!! ACTTATTTGAGTTTATCTAT+AGG + chr7_1:75869101-75869120 Msa1038890:intron 20.0%
!! TTCTTTCAATTTGATGTTAT+AGG + chr7_1:75869547-75869566 Msa1038890:intron 20.0%
!! TATAAATTGGTACCTAAAAT+GGG - chr7_1:75869987-75870006 None:intergenic 20.0%
!! ATATAAATTGGTACCTAAAA+TGG - chr7_1:75869988-75870007 None:intergenic 20.0%
!!! GTTATTTCAGCTATATAAAT+TGG - chr7_1:75870000-75870019 None:intergenic 20.0%
!! AACTGCGTTAAATATTATAA+AGG + chr7_1:75870067-75870086 Msa1038890:intron 20.0%
!! ACTGCGTTAAATATTATAAA+GGG + chr7_1:75870068-75870087 Msa1038890:intron 20.0%
!! GCTTACTTTAAATCTTTATT+TGG + chr7_1:75870177-75870196 Msa1038890:intron 20.0%
!!! TTTATACACTTACTTTTTGT+AGG + chr7_1:75870915-75870934 Msa1038890:intron 20.0%
!! TAAAAATATGCAGATTCTTA+TGG + chr7_1:75871053-75871072 Msa1038890:intron 20.0%
!! AATAGAATTATTAATTCTGC+TGG - chr7_1:75871255-75871274 None:intergenic 20.0%
!!! CTATTTTCTCAAATTATTAC+TGG + chr7_1:75871270-75871289 Msa1038890:intron 20.0%
!! ATCTTATTCATCATATTAAG+AGG - chr7_1:75871505-75871524 None:intergenic 20.0%
!!! AACTTTCTCTATTTTAAATG+TGG + chr7_1:75872027-75872046 Msa1038890:intron 20.0%
!! ATTTCATGAATGCAAATATA+AGG - chr7_1:75872097-75872116 None:intergenic 20.0%
!! TGATTATTATGGTAACTAAA+TGG - chr7_1:75872185-75872204 None:intergenic 20.0%
!! ATTTAGTTACCATAATAATC+AGG + chr7_1:75872184-75872203 Msa1038890:intron 20.0%
!!! ATTTTTTGTTTTCTTCTAGA+GGG - chr7_1:75872496-75872515 None:intergenic 20.0%
!! AAGAAAACAAAAAATCAGAA+AGG + chr7_1:75872501-75872520 Msa1038890:intron 20.0%
!! CCATTTCTTAAAATATTACT+TGG - chr7_1:75872802-75872821 None:intergenic 20.0%
!!! CCAAGTAATATTTTAAGAAA+TGG + chr7_1:75872799-75872818 Msa1038890:three_prime_UTR 20.0%
!!! TTTTAAGAAATGGTATATGA+TGG + chr7_1:75872809-75872828 Msa1038890:three_prime_UTR 20.0%
!! TAAATACTATGAATAGAACA+AGG + chr7_1:75872937-75872956 Msa1038890:three_prime_UTR 20.0%
!! AAATACTATGAATAGAACAA+GGG + chr7_1:75872938-75872957 Msa1038890:three_prime_UTR 20.0%
!! ATTATGTAATCTGAAACGAT+TGG - chr7_1:75868483-75868502 None:intergenic 25.0%
! AAAATGAGTGTATATGATTG+CGG - chr7_1:75868534-75868553 None:intergenic 25.0%
! GTAAGTATAAGAATACTAGT+TGG - chr7_1:75868766-75868785 None:intergenic 25.0%
!!! TCATTTACATCATTTTTTGG+AGG + chr7_1:75868837-75868856 Msa1038890:intron 25.0%
!!! TTTATGCAGTATTCACTTTT+TGG + chr7_1:75869376-75869395 Msa1038890:intron 25.0%
!! TTTGGTTCAATACTAACAAT+TGG + chr7_1:75869394-75869413 Msa1038890:CDS 25.0%
! ATAGTTGAAATAGACAGAAT+TGG - chr7_1:75869488-75869507 None:intergenic 25.0%
! ACATTAGGACCTATAATAAA+TGG + chr7_1:75869674-75869693 Msa1038890:intron 25.0%
! TACAACCTTCCATTTATTAT+AGG - chr7_1:75869686-75869705 None:intergenic 25.0%
!!! TTTGGTTGATTTTTGTTTGA+AGG + chr7_1:75869807-75869826 Msa1038890:intron 25.0%
! AGGGTCAATAGTTTAAATTA+CGG + chr7_1:75870087-75870106 Msa1038890:intron 25.0%
! AATAGTTTAAATTACGGTTG+CGG + chr7_1:75870093-75870112 Msa1038890:intron 25.0%
!! TCAGAACTTTTATATTGATG+TGG + chr7_1:75870116-75870135 Msa1038890:intron 25.0%
! GTATCACTAACTTATCTTAT+TGG + chr7_1:75870232-75870251 Msa1038890:CDS 25.0%
!!! CATCATTTTTGTCAAATTGT+AGG + chr7_1:75870523-75870542 Msa1038890:intron 25.0%
! ATTACATACTCTAATTTCAG+TGG - chr7_1:75870821-75870840 None:intergenic 25.0%
!! AAACAGAAGCTAACATTTTT+GGG + chr7_1:75870962-75870981 Msa1038890:CDS 25.0%
! TAAGATAAGATGCATGAATT+GGG - chr7_1:75871035-75871054 None:intergenic 25.0%
! TTAAGATAAGATGCATGAAT+TGG - chr7_1:75871036-75871055 None:intergenic 25.0%
! TATTACATGATTCTCATGAA+AGG + chr7_1:75871377-75871396 Msa1038890:intron 25.0%
! ATTACATGATTCTCATGAAA+GGG + chr7_1:75871378-75871397 Msa1038890:intron 25.0%
! TATGATGAATAAGATGAGAT+AGG + chr7_1:75871510-75871529 Msa1038890:intron 25.0%
!!! GTAATTTTGATGGATAAATC+TGG + chr7_1:75871620-75871639 Msa1038890:CDS 25.0%
!! TAATCGTTTTACCAGTAAAA+GGG - chr7_1:75871654-75871673 None:intergenic 25.0%
!! TTAATCGTTTTACCAGTAAA+AGG - chr7_1:75871655-75871674 None:intergenic 25.0%
! ATTTACAGAATAGCATGAAA+AGG - chr7_1:75871691-75871710 None:intergenic 25.0%
!!! AAATCAGAGAAAGTATTAGT+AGG - chr7_1:75872066-75872085 None:intergenic 25.0%
!! TGGTAAAGTTAAAAGGTATA+TGG + chr7_1:75872144-75872163 Msa1038890:intron 25.0%
! CTGTATATACCTGATTATTA+TGG - chr7_1:75872196-75872215 None:intergenic 25.0%
! CATAATAATCAGGTATATAC+AGG + chr7_1:75872194-75872213 Msa1038890:intron 25.0%
!!! GATTTTTTGTTTTCTTCTAG+AGG - chr7_1:75872497-75872516 None:intergenic 25.0%
!!! TAGTTTTGCTACAAATAGAA+TGG - chr7_1:75872654-75872673 None:intergenic 25.0%
! TTGTGAATGAAAACAGAATA+TGG - chr7_1:75872869-75872888 None:intergenic 25.0%
AAATGAGTGTATATGATTGC+GGG - chr7_1:75868533-75868552 None:intergenic 30.0%
TAAGATACACAGATGCTTTA+AGG - chr7_1:75868644-75868663 None:intergenic 30.0%
TTCAAAGAAAGTTCAAACCT+CGG - chr7_1:75868995-75869014 None:intergenic 30.0%
!! TAGTTTGACTTAGTTCTGTT+TGG - chr7_1:75869350-75869369 None:intergenic 30.0%
AATTTGATGTTATAGGCCAT+GGG + chr7_1:75869554-75869573 Msa1038890:intron 30.0%
TAGGACCTATAATAAATGGA+AGG + chr7_1:75869678-75869697 Msa1038890:intron 30.0%
TAAGAAAGAATTCCCAAAAC+TGG - chr7_1:75869762-75869781 None:intergenic 30.0%
!! ATTTTTGTTTGAAGGTTGCT+TGG + chr7_1:75869815-75869834 Msa1038890:intron 30.0%
TATGTTGGAAGACTATTGTT+AGG + chr7_1:75869844-75869863 Msa1038890:CDS 30.0%
AATGGGTATTCTATCATATG+TGG + chr7_1:75869873-75869892 Msa1038890:CDS 30.0%
!!! TGACAGCTAATGATTTGTTT+TGG + chr7_1:75870208-75870227 Msa1038890:intron 30.0%
!!! GACAGCTAATGATTTGTTTT+GGG + chr7_1:75870209-75870228 Msa1038890:intron 30.0%
!!! ACAGCTAATGATTTGTTTTG+GGG + chr7_1:75870210-75870229 Msa1038890:intron 30.0%
TTATTGGAGCTTTCTTCAAT+TGG + chr7_1:75870248-75870267 Msa1038890:CDS 30.0%
ATAGGTAAAGATGTTCTTTC+TGG + chr7_1:75870286-75870305 Msa1038890:intron 30.0%
ATTGTTTGTGCTAATTGTGT+TGG + chr7_1:75870470-75870489 Msa1038890:intron 30.0%
! GAATGTTGATATTTCTGAAG+AGG + chr7_1:75870795-75870814 Msa1038890:CDS 30.0%
! CAAACAGAAGCTAACATTTT+TGG + chr7_1:75870961-75870980 Msa1038890:CDS 30.0%
TGGTATTTAGTCACATTGTT+AGG + chr7_1:75871073-75871092 Msa1038890:intron 30.0%
ATTTAGTCACATTGTTAGGT+AGG + chr7_1:75871077-75871096 Msa1038890:intron 30.0%
CAAACTGTTGTAGTATTATC+AGG - chr7_1:75871109-75871128 None:intergenic 30.0%
CTGATAATACTACAACAGTT+TGG + chr7_1:75871107-75871126 Msa1038890:CDS 30.0%
ATAATACTACAACAGTTTGG+CGG + chr7_1:75871110-75871129 Msa1038890:CDS 30.0%
TAGCATATGACATGTAAAGA+AGG + chr7_1:75871329-75871348 Msa1038890:intron 30.0%
GAAAATTCTTATCCATCACA+GGG + chr7_1:75871400-75871419 Msa1038890:intron 30.0%
!! AAGTATTGGAACAATAGCAA+TGG + chr7_1:75871431-75871450 Msa1038890:CDS 30.0%
AAATTACTGAACAGTGTGAA+GGG - chr7_1:75871567-75871586 None:intergenic 30.0%
! AATCGTTTTACCAGTAAAAG+GGG - chr7_1:75871653-75871672 None:intergenic 30.0%
AAAAGAATGACAGAGATACA+AGG - chr7_1:75871774-75871793 None:intergenic 30.0%
! ATTGTTTTCTTCCAATATGC+AGG + chr7_1:75871869-75871888 Msa1038890:intron 30.0%
!! GACTTATAAATCGGTTTTGT+AGG - chr7_1:75871986-75872005 None:intergenic 30.0%
CATGAATGCAAATATAAGGT+TGG - chr7_1:75872093-75872112 None:intergenic 30.0%
TTGCATTCATGAAATAGACT+TGG + chr7_1:75872102-75872121 Msa1038890:intron 30.0%
ATGATTATCTAGTCAAGATG+AGG - chr7_1:75872323-75872342 None:intergenic 30.0%
ATATTTCCCATCAATGTGAA+GGG + chr7_1:75872355-75872374 Msa1038890:CDS 30.0%
TGAATGAAGTCTTGAAAAGT+AGG + chr7_1:75872537-75872556 Msa1038890:intron 30.0%
GAATGAAGTCTTGAAAAGTA+GGG + chr7_1:75872538-75872557 Msa1038890:intron 30.0%
ATCCAACAAAGAGATGAATT+TGG + chr7_1:75872739-75872758 Msa1038890:CDS 30.0%
! AAGAAATGGTATATGATGGA+TGG + chr7_1:75872813-75872832 Msa1038890:three_prime_UTR 30.0%
! TAATCTGAAACGATTGGCAT+TGG - chr7_1:75868477-75868496 None:intergenic 35.0%
!! GCTTTAAGGTTATGAAGAGT+AGG - chr7_1:75868630-75868649 None:intergenic 35.0%
!!! GTCTCTGGTTCTTATGTTTT+TGG + chr7_1:75868799-75868818 Msa1038890:CDS 35.0%
!!! TTCTTATGTTTTTGGCTCTG+CGG + chr7_1:75868807-75868826 Msa1038890:CDS 35.0%
!! ATTGTTGGCTTTAGTTGACT+TGG + chr7_1:75869048-75869067 Msa1038890:intron 35.0%
AATACTAACAATTGGAGCGA+TGG + chr7_1:75869402-75869421 Msa1038890:CDS 35.0%
TGCTAAACTACCACTTACAA+TGG - chr7_1:75869434-75869453 None:intergenic 35.0%
GACAGAATTGGAGAAACTTA+CGG - chr7_1:75869476-75869495 None:intergenic 35.0%
CAATTTGATGTTATAGGCCA+TGG + chr7_1:75869553-75869572 Msa1038890:intron 35.0%
TGGACAGAATTGAAGAAACA+CGG - chr7_1:75869742-75869761 None:intergenic 35.0%
! TCTTCAATTCTGTCCAGTTT+TGG + chr7_1:75869746-75869765 Msa1038890:intron 35.0%
! CTTCAATTCTGTCCAGTTTT+GGG + chr7_1:75869747-75869766 Msa1038890:intron 35.0%
!! GTAGTTGCTATTTGATGGTT+TGG + chr7_1:75869789-75869808 Msa1038890:intron 35.0%
ACTATTGTTAGGATGTGGAA+TGG + chr7_1:75869855-75869874 Msa1038890:CDS 35.0%
CTATTGTTAGGATGTGGAAT+GGG + chr7_1:75869856-75869875 Msa1038890:CDS 35.0%
TCCCAAGAAATGCAACAAAT+AGG + chr7_1:75869951-75869970 Msa1038890:intron 35.0%
! GCCTATTTGTTGCATTTCTT+GGG - chr7_1:75869955-75869974 None:intergenic 35.0%
! TGCCTATTTGTTGCATTTCT+TGG - chr7_1:75869956-75869975 None:intergenic 35.0%
TATAGCTGAAATAACACCCA+AGG + chr7_1:75870005-75870024 Msa1038890:CDS 35.0%
TATTGATGTGGTCAGAAATG+CGG + chr7_1:75870128-75870147 Msa1038890:intron 35.0%
! TTTCTTCAATTGGAGGCTTT+TGG + chr7_1:75870258-75870277 Msa1038890:CDS 35.0%
TATCAACATTCTTTCCCCTA+AGG - chr7_1:75870786-75870805 None:intergenic 35.0%
!! TTCATTAGAGTGTTGACTTG+TGG + chr7_1:75870850-75870869 Msa1038890:intron 35.0%
!! TCATTAGAGTGTTGACTTGT+GGG + chr7_1:75870851-75870870 Msa1038890:intron 35.0%
AGTTCTATATTTGTCTCTGC+TGG + chr7_1:75871158-75871177 Msa1038890:CDS 35.0%
GGAAAATTCTTATCCATCAC+AGG + chr7_1:75871399-75871418 Msa1038890:intron 35.0%
TGCTATTGTTCCAATACTTC+TGG - chr7_1:75871430-75871449 None:intergenic 35.0%
! AATAGCAATGGTTGTTGTTC+AGG + chr7_1:75871443-75871462 Msa1038890:CDS 35.0%
AATTACTGAACAGTGTGAAG+GGG - chr7_1:75871566-75871585 None:intergenic 35.0%
GAAATTACTGAACAGTGTGA+AGG - chr7_1:75871568-75871587 None:intergenic 35.0%
!!! AGCTTTGGGAGTAATTTTGA+TGG + chr7_1:75871610-75871629 Msa1038890:CDS 35.0%
ACAGAATAGCATGAAAAGGA+AGG - chr7_1:75871687-75871706 None:intergenic 35.0%
ATTATACAGATCTCTGCATC+AGG + chr7_1:75871730-75871749 Msa1038890:intron 35.0%
! ATCTCTGTCATTCTTTTTGC+AGG + chr7_1:75871777-75871796 Msa1038890:CDS 35.0%
TTTATGCAAGTCCTGCATAT+TGG - chr7_1:75871883-75871902 None:intergenic 35.0%
ATATGCAGGACTTGCATAAA+TGG + chr7_1:75871883-75871902 Msa1038890:intron 35.0%
! CAAAACCGATTTATAAGTCG+AGG + chr7_1:75871987-75872006 Msa1038890:intron 35.0%
ACACTCCTCGACTTATAAAT+CGG - chr7_1:75871995-75872014 None:intergenic 35.0%
!!! TTTTAACTTTACCACCATCG+CGG - chr7_1:75872138-75872157 None:intergenic 35.0%
TATACAGGATCTTTCTCACT+TGG + chr7_1:75872209-75872228 Msa1038890:CDS 35.0%
AAAATTTGCATACCCAGTGA+AGG - chr7_1:75872279-75872298 None:intergenic 35.0%
TCACATTGATGGGAAATATC+TGG - chr7_1:75872354-75872373 None:intergenic 35.0%
GATATTTCCCATCAATGTGA+AGG + chr7_1:75872354-75872373 Msa1038890:intron 35.0%
! GCTTTGTTACATTTGTTCAC+TGG + chr7_1:75872389-75872408 Msa1038890:CDS 35.0%
!!! CTTTTAACTTCCTCATGAGT+TGG + chr7_1:75872437-75872456 Msa1038890:CDS 35.0%
GAGAATATGAAGAAAGTTCC+TGG - chr7_1:75872614-75872633 None:intergenic 35.0%
TTCATATTCTCTAGCATCTG+TGG + chr7_1:75872623-75872642 Msa1038890:CDS 35.0%
TTGCTACAAATAGAATGGTG+AGG - chr7_1:75872649-75872668 None:intergenic 35.0%
TTGTTGGATACTGTCTGATA+TGG - chr7_1:75872728-75872747 None:intergenic 35.0%
TGCCAAATTCATCTCTTTGT+TGG - chr7_1:75872744-75872763 None:intergenic 35.0%
TATGCATGCAATTCTGTTAC+AGG - chr7_1:75872773-75872792 None:intergenic 35.0%
!! ATATGATGGATGGTGTAGAA+AGG + chr7_1:75872823-75872842 Msa1038890:three_prime_UTR 35.0%
!!! TGGCATTGGTTTTGTTGTGA+AGG - chr7_1:75868463-75868482 None:intergenic 40.0%
AACTATCACTCTCATCTTGC+AGG + chr7_1:75868912-75868931 Msa1038890:intron 40.0%
ATCACAGATGACCTTGATCT+TGG + chr7_1:75868964-75868983 Msa1038890:CDS 40.0%
!! GCTTTCTCTATGGCTTGTTT+GGG + chr7_1:75869075-75869094 Msa1038890:intron 40.0%
!! GCTGTTTTCACAAGCTATCA+TGG - chr7_1:75869210-75869229 None:intergenic 40.0%
GGTAGTTTAGCAGATTATGC+AGG + chr7_1:75869442-75869461 Msa1038890:CDS 40.0%
!! AGTTACCTTTGAGACTGCAA+TGG - chr7_1:75869615-75869634 None:intergenic 40.0%
ACAGAATTGAAGAAACACGG+AGG - chr7_1:75869739-75869758 None:intergenic 40.0%
CCATCAAATAGCAACTACGT+TGG - chr7_1:75869787-75869806 None:intergenic 40.0%
!! CCAACGTAGTTGCTATTTGA+TGG + chr7_1:75869784-75869803 Msa1038890:intron 40.0%
TTTGTTTGAAGGTTGCTTGG+TGG + chr7_1:75869818-75869837 Msa1038890:intron 40.0%
GGAAGACTATTGTTAGGATG+TGG + chr7_1:75869850-75869869 Msa1038890:CDS 40.0%
ATGCGGTTATTATGCTGTTG+CGG + chr7_1:75870145-75870164 Msa1038890:intron 40.0%
TATGCTGTTGCGGAACATAT+AGG + chr7_1:75870155-75870174 Msa1038890:intron 40.0%
TTGGAGCTTTCTTCAATTGG+AGG + chr7_1:75870251-75870270 Msa1038890:CDS 40.0%
!! TGGAGGCTTTTGGCTATAAT+AGG + chr7_1:75870268-75870287 Msa1038890:CDS 40.0%
CAGTGTTTACGTGTCAATGT+CGG - chr7_1:75870597-75870616 None:intergenic 40.0%
TGATAGTTGCATTGTTCTGC+AGG + chr7_1:75870717-75870736 Msa1038890:intron 40.0%
AATCCACTTTACAGCACCTT+AGG + chr7_1:75870767-75870786 Msa1038890:CDS 40.0%
ATCCACTTTACAGCACCTTA+GGG + chr7_1:75870768-75870787 Msa1038890:CDS 40.0%
! TTGTGGGTTATCATCTAGCT+AGG + chr7_1:75870867-75870886 Msa1038890:intron 40.0%
TCACATTGTTAGGTAGGAGT+TGG + chr7_1:75871083-75871102 Msa1038890:intron 40.0%
!! ACAGGGTTTTCCAGAAGTAT+TGG + chr7_1:75871417-75871436 Msa1038890:intron 40.0%
ATAGATCCCAATGACAGCTT+TGG + chr7_1:75871595-75871614 Msa1038890:intron 40.0%
TAGATCCCAATGACAGCTTT+GGG + chr7_1:75871596-75871615 Msa1038890:intron 40.0%
TTACTCCCAAAGCTGTCATT+GGG - chr7_1:75871604-75871623 None:intergenic 40.0%
ATTACTCCCAAAGCTGTCAT+TGG - chr7_1:75871605-75871624 None:intergenic 40.0%
TAAGATGATCTGCTCTTGCT+AGG + chr7_1:75871812-75871831 Msa1038890:intron 40.0%
GCTAGGTTGTTCTTCACAAT+AGG + chr7_1:75871829-75871848 Msa1038890:intron 40.0%
TTGGTTTAAGAATACCGCGA+TGG + chr7_1:75872121-75872140 Msa1038890:intron 40.0%
! GCGATGGTGGTAAAGTTAAA+AGG + chr7_1:75872137-75872156 Msa1038890:intron 40.0%
ACCTCAGACATTATAACCCA+GGG - chr7_1:75872248-75872267 None:intergenic 40.0%
TACCTCAGACATTATAACCC+AGG - chr7_1:75872249-75872268 None:intergenic 40.0%
AGGTAATATGCTCCTTCACT+GGG + chr7_1:75872264-75872283 Msa1038890:intron 40.0%
! TTGTTCACTGGTTGTGTTCT+TGG + chr7_1:75872401-75872420 Msa1038890:CDS 40.0%
TAGGGTATGCTTCTTAAGTG+TGG + chr7_1:75872556-75872575 Msa1038890:intron 40.0%
AAAACTAGTACCAGAGACCA+AGG + chr7_1:75872667-75872686 Msa1038890:CDS 40.0%
AAACTAGTACCAGAGACCAA+GGG + chr7_1:75872668-75872687 Msa1038890:CDS 40.0%
CATTCGCGAAGAAGCTAGTT+CGG + chr7_1:75868738-75868757 Msa1038890:CDS 45.0%
TATCACTCTCATCTTGCAGG+TGG + chr7_1:75868915-75868934 Msa1038890:intron 45.0%
ATCACTCTCATCTTGCAGGT+GGG + chr7_1:75868916-75868935 Msa1038890:intron 45.0%
TATTCATCCCCTGCTCAATC+TGG + chr7_1:75868940-75868959 Msa1038890:CDS 45.0%
TGTGATTCCAGATTGAGCAG+GGG - chr7_1:75868950-75868969 None:intergenic 45.0%
CTGTGATTCCAGATTGAGCA+GGG - chr7_1:75868951-75868970 None:intergenic 45.0%
TCTGTGATTCCAGATTGAGC+AGG - chr7_1:75868952-75868971 None:intergenic 45.0%
!! TGGCTTTAGTTGACTTGGAG+TGG + chr7_1:75869053-75869072 Msa1038890:intron 45.0%
ACTTGGAGTGGCTTTCTCTA+TGG + chr7_1:75869065-75869084 Msa1038890:intron 45.0%
!! GGCTTTCTCTATGGCTTGTT+TGG + chr7_1:75869074-75869093 Msa1038890:intron 45.0%
CTAACAATTGGAGCGATGGT+TGG + chr7_1:75869406-75869425 Msa1038890:CDS 45.0%
!! ATGGTTGGTGCCATTGTAAG+TGG + chr7_1:75869421-75869440 Msa1038890:CDS 45.0%
TCCGAGCTATGTTGCATCTT+GGG + chr7_1:75869581-75869600 Msa1038890:CDS 45.0%
TCCCAAGATGCAACATAGCT+CGG - chr7_1:75869585-75869604 None:intergenic 45.0%
AGCTATGTTGCATCTTGGGA+TGG + chr7_1:75869585-75869604 Msa1038890:CDS 45.0%
!! GTTGCTTGGTGGCTTTATGT+TGG + chr7_1:75869829-75869848 Msa1038890:CDS 45.0%
! GGCAGTTCTCTTCCCATTTT+AGG + chr7_1:75869972-75869991 Msa1038890:intron 45.0%
ATAACACCCAAGGATCTTCG+AGG + chr7_1:75870015-75870034 Msa1038890:CDS 45.0%
TAACACCCAAGGATCTTCGA+GGG + chr7_1:75870016-75870035 Msa1038890:CDS 45.0%
AATCTCCCTCGAAGATCCTT+GGG - chr7_1:75870024-75870043 None:intergenic 45.0%
GAGATTCACTGCAGTTCATC+AGG + chr7_1:75870038-75870057 Msa1038890:CDS 45.0%
TCAATCCACTGACACAGACA+CGG + chr7_1:75870569-75870588 Msa1038890:intron 45.0%
TTGCATTGTTCTGCAGGCAA+AGG + chr7_1:75870723-75870742 Msa1038890:intron 45.0%
ATTGTTCTGCAGGCAAAGGT+TGG + chr7_1:75870727-75870746 Msa1038890:intron 45.0%
TCCACTTTACAGCACCTTAG+GGG + chr7_1:75870769-75870788 Msa1038890:CDS 45.0%
CAACAGTTTGGCGGAGTTAA+CGG + chr7_1:75871119-75871138 Msa1038890:CDS 45.0%
TTGACCATCAGTGACATGTC+TGG + chr7_1:75871293-75871312 Msa1038890:intron 45.0%
AACACCAGACATGTCACTGA+TGG - chr7_1:75871300-75871319 None:intergenic 45.0%
ATCAGTGACATGTCTGGTGT+TGG + chr7_1:75871299-75871318 Msa1038890:intron 45.0%
! ACTTCTGGAAAACCCTGTGA+TGG - chr7_1:75871415-75871434 None:intergenic 45.0%
TCTGCATCAGGAACATGCTT+AGG + chr7_1:75871742-75871761 Msa1038890:CDS 45.0%
GCAGGACTTGCATAAATGGA+AGG + chr7_1:75871887-75871906 Msa1038890:intron 45.0%
GAAGGAATTCAGTCCCATTC+TGG + chr7_1:75871905-75871924 Msa1038890:CDS 45.0%
GTTTAAGAATACCGCGATGG+TGG + chr7_1:75872124-75872143 Msa1038890:intron 45.0%
AGGATCTTTCTCACTTGGCA+TGG + chr7_1:75872214-75872233 Msa1038890:CDS 45.0%
GGATCTTTCTCACTTGGCAT+GGG + chr7_1:75872215-75872234 Msa1038890:CDS 45.0%
ACCCTGGGTTATAATGTCTG+AGG + chr7_1:75872244-75872263 Msa1038890:CDS 45.0%
GAGGTAATATGCTCCTTCAC+TGG + chr7_1:75872263-75872282 Msa1038890:intron 45.0%
GCAGAACCCTTCACATTGAT+GGG - chr7_1:75872364-75872383 None:intergenic 45.0%
AGCAGAACCCTTCACATTGA+TGG - chr7_1:75872365-75872384 None:intergenic 45.0%
ATCAATGTGAAGGGTTCTGC+TGG + chr7_1:75872364-75872383 Msa1038890:CDS 45.0%
CTGCTGAATTCCAACTCATG+AGG - chr7_1:75872450-75872469 None:intergenic 45.0%
! CTCATGAGTTGGAATTCAGC+AGG + chr7_1:75872448-75872467 Msa1038890:CDS 45.0%
! TGAGTTGGAATTCAGCAGGT+AGG + chr7_1:75872452-75872471 Msa1038890:intron 45.0%
AACTAGTACCAGAGACCAAG+GGG + chr7_1:75872669-75872688 Msa1038890:CDS 45.0%
TGGATGGTGTAGAAAGGTTC+AGG + chr7_1:75872829-75872848 Msa1038890:three_prime_UTR 45.0%
GAATAGCACCATGCTCGAAA+AGG + chr7_1:75872894-75872913 Msa1038890:three_prime_UTR 45.0%
!! GAAACACTCCTTTTCGAGCA+TGG - chr7_1:75872905-75872924 None:intergenic 45.0%
!! TAGAACAAGGGTATCCCTAG+CGG + chr7_1:75872950-75872969 Msa1038890:three_prime_UTR 45.0%
AACGTTAAGAGCTCCCAAGC+TGG - chr7_1:75868404-75868423 None:intergenic 50.0%
! CGAACTAGCTTCTTCGCGAA+TGG - chr7_1:75868740-75868759 None:intergenic 50.0%
AGAACCAGAGACAGCAGCAA+GGG - chr7_1:75868791-75868810 None:intergenic 50.0%
AAGAACCAGAGACAGCAGCA+AGG - chr7_1:75868792-75868811 None:intergenic 50.0%
ACATAGCTCGGAGAATCCCA+TGG - chr7_1:75869573-75869592 None:intergenic 50.0%
CTCCGAGCTATGTTGCATCT+TGG + chr7_1:75869580-75869599 Msa1038890:CDS 50.0%
GCTTGCCATTGCAGTCTCAA+AGG + chr7_1:75869607-75869626 Msa1038890:CDS 50.0%
GAATCTCCCTCGAAGATCCT+TGG - chr7_1:75870025-75870044 None:intergenic 50.0%
CTCAGAAGCTGTGCAAGACA+TGG - chr7_1:75870387-75870406 None:intergenic 50.0%
CCTAGGAGACTCGGGAATAA+AGG - chr7_1:75870415-75870434 None:intergenic 50.0%
CCTTTATTCCCGAGTCTCCT+AGG + chr7_1:75870412-75870431 Msa1038890:CDS 50.0%
TTATTCCCGAGTCTCCTAGG+TGG + chr7_1:75870415-75870434 Msa1038890:CDS 50.0%
! CAAAGGTTGGTCGCTTGGAA+AGG + chr7_1:75870740-75870759 Msa1038890:CDS 50.0%
!! TCCCCTAAGGTGCTGTAAAG+TGG - chr7_1:75870773-75870792 None:intergenic 50.0%
! AGCTTCTGTTTGCTGCTGAG+AGG - chr7_1:75870953-75870972 None:intergenic 50.0%
! TGGAAGACGACCCCTTTTAC+TGG + chr7_1:75871640-75871659 Msa1038890:CDS 50.0%
TCTTTCTCACTTGGCATGGG+AGG + chr7_1:75872218-75872237 Msa1038890:CDS 50.0%
TGCTCTCAGATCAACCGCTA+GGG - chr7_1:75872967-75872986 None:intergenic 50.0%
GAACAACTCACCAGCCACCT+AGG - chr7_1:75870432-75870451 None:intergenic 55.0%
AGTCCCATTCTGGCACTCGT+CGG + chr7_1:75871915-75871934 Msa1038890:CDS 55.0%
ACACCGACGAGTGCCAGAAT+GGG - chr7_1:75871921-75871940 None:intergenic 55.0%
TACACCGACGAGTGCCAGAA+TGG - chr7_1:75871922-75871941 None:intergenic 55.0%
TTGGCATGGGAGGAATACCC+TGG + chr7_1:75872228-75872247 Msa1038890:CDS 55.0%
TGGCATGGGAGGAATACCCT+GGG + chr7_1:75872229-75872248 Msa1038890:CDS 55.0%
TTCTTCTAGCGTACGCCCCT+TGG - chr7_1:75872687-75872706 None:intergenic 55.0%
GTGCTCTCAGATCAACCGCT+AGG - chr7_1:75872968-75872987 None:intergenic 55.0%
ACCACCCTTGCTGCTGTCTC+TGG + chr7_1:75868784-75868803 Msa1038890:CDS 60.0%
ACCAGAGACAGCAGCAAGGG+TGG - chr7_1:75868788-75868807 None:intergenic 60.0%
CCTCGGCTACGCCAAGATCA+AGG - chr7_1:75868978-75868997 None:intergenic 60.0%
CCTTGATCTTGGCGTAGCCG+AGG + chr7_1:75868975-75868994 Msa1038890:CDS 60.0%
ACCAGCCACCTAGGAGACTC+GGG - chr7_1:75870423-75870442 None:intergenic 60.0%
CACCAGCCACCTAGGAGACT+CGG - chr7_1:75870424-75870443 None:intergenic 60.0%
! GCAGGCAAAGGTTGGTCGCT+TGG + chr7_1:75870735-75870754 Msa1038890:intron 60.0%
TCTGGCACTCGTCGGTGTAC+TGG + chr7_1:75871923-75871942 Msa1038890:CDS 60.0%
TCCCGAGTCTCCTAGGTGGC+TGG + chr7_1:75870419-75870438 Msa1038890:CDS 65.0%
!! CGGTGCCGTGTCTGTGTCAG+TGG - chr7_1:75870577-75870596 None:intergenic 65.0%
AGCGTACGCCCCTTGGTCTC+TGG - chr7_1:75872680-75872699 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 75868399 75873082 75868399 ID=Msa1038890;Name=Msa1038890
chr7_1 mRNA 75868399 75873082 75868399 ID=Msa1038890-mRNA-1;Parent=Msa1038890;Name=Msa1038890-mRNA-1;_AED=0.35;_eAED=0.35;_QI=298|1|1|1|1|1|18|289|483
chr7_1 exon 75868399 75868828 75868399 ID=Msa1038890-mRNA-1:exon:19499;Parent=Msa1038890-mRNA-1
chr7_1 exon 75868934 75868996 75868934 ID=Msa1038890-mRNA-1:exon:19500;Parent=Msa1038890-mRNA-1
chr7_1 exon 75869385 75869474 75869385 ID=Msa1038890-mRNA-1:exon:19501;Parent=Msa1038890-mRNA-1
chr7_1 exon 75869569 75869628 75869569 ID=Msa1038890-mRNA-1:exon:19502;Parent=Msa1038890-mRNA-1
chr7_1 exon 75869829 75869894 75869829 ID=Msa1038890-mRNA-1:exon:19503;Parent=Msa1038890-mRNA-1
chr7_1 exon 75869994 75870059 75869994 ID=Msa1038890-mRNA-1:exon:19504;Parent=Msa1038890-mRNA-1
chr7_1 exon 75870214 75870289 75870214 ID=Msa1038890-mRNA-1:exon:19505;Parent=Msa1038890-mRNA-1
chr7_1 exon 75870376 75870440 75870376 ID=Msa1038890-mRNA-1:exon:19506;Parent=Msa1038890-mRNA-1
chr7_1 exon 75870739 75870831 75870739 ID=Msa1038890-mRNA-1:exon:19507;Parent=Msa1038890-mRNA-1
chr7_1 exon 75870937 75871017 75870937 ID=Msa1038890-mRNA-1:exon:19508;Parent=Msa1038890-mRNA-1
chr7_1 exon 75871095 75871179 75871095 ID=Msa1038890-mRNA-1:exon:19509;Parent=Msa1038890-mRNA-1
chr7_1 exon 75871421 75871464 75871421 ID=Msa1038890-mRNA-1:exon:19510;Parent=Msa1038890-mRNA-1
chr7_1 exon 75871599 75871661 75871599 ID=Msa1038890-mRNA-1:exon:19511;Parent=Msa1038890-mRNA-1
chr7_1 exon 75871739 75871798 75871739 ID=Msa1038890-mRNA-1:exon:19512;Parent=Msa1038890-mRNA-1
chr7_1 exon 75871891 75871944 75871891 ID=Msa1038890-mRNA-1:exon:19513;Parent=Msa1038890-mRNA-1
chr7_1 exon 75872206 75872265 75872206 ID=Msa1038890-mRNA-1:exon:19514;Parent=Msa1038890-mRNA-1
chr7_1 exon 75872355 75872469 75872355 ID=Msa1038890-mRNA-1:exon:19515;Parent=Msa1038890-mRNA-1
chr7_1 exon 75872615 75873082 75872615 ID=Msa1038890-mRNA-1:exon:19516;Parent=Msa1038890-mRNA-1
chr7_1 five_prime_UTR 75868399 75868696 75868399 ID=Msa1038890-mRNA-1:five_prime_utr;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75868697 75868828 75868697 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75868934 75868996 75868934 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75869385 75869474 75869385 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75869569 75869628 75869569 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75869829 75869894 75869829 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75869994 75870059 75869994 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75870214 75870289 75870214 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75870376 75870440 75870376 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75870739 75870831 75870739 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75870937 75871017 75870937 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75871095 75871179 75871095 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75871421 75871464 75871421 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75871599 75871661 75871599 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75871739 75871798 75871739 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75871891 75871944 75871891 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75872206 75872265 75872206 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75872355 75872469 75872355 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 CDS 75872615 75872793 75872615 ID=Msa1038890-mRNA-1:cds;Parent=Msa1038890-mRNA-1
chr7_1 three_prime_UTR 75872794 75873082 75872794 ID=Msa1038890-mRNA-1:three_prime_utr;Parent=Msa1038890-mRNA-1
Gene Sequence

>Msa1038890

ATGAAGACTAAGTTTAAAGATTTTTCTCGTCTACTTTCTTCCATTCGCGAAGAAGCTAGTTCGGTACCAACTAGTATTCTTATACTTACCACCCTTGCTGCTGTCTCTGGTTCTTATGTTTTTGGCTCTGCGGTGGGTTATTCATCCCCTGCTCAATCTGGAATCACAGATGACCTTGATCTTGGCGTAGCCGAGTATTCACTTTTTGGTTCAATACTAACAATTGGAGCGATGGTTGGTGCCATTGTAAGTGGTAGTTTAGCAGATTATGCAGGTCGTCGAGCCGCCATGGGATTCTCCGAGCTATGTTGCATCTTGGGATGGCTTGCCATTGCAGTCTCAAAGGTTGCTTGGTGGCTTTATGTTGGAAGACTATTGTTAGGATGTGGAATGGGTATTCTATCATATGTGGTACCAATTTATATAGCTGAAATAACACCCAAGGATCTTCGAGGGAGATTCACTGCAGTTCATCAGCTAATGATTTGTTTTGGGGTATCACTAACTTATCTTATTGGAGCTTTCTTCAATTGGAGGCTTTTGGCTATAATAGGAACTATTCCATGTCTTGCACAGCTTCTGAGTCTATCCTTTATTCCCGAGTCTCCTAGGTGGCTGGCAAAGGTTGGTCGCTTGGAAAGGAGTGAATCCACTTTACAGCACCTTAGGGGAAAGAATGTTGATATTTCTGAAGAGGCCACTGAAATTAGAGAATTTACAGAAGCCTCTCAGCAGCAAACAGAAGCTAACATTTTTGGGTTATTTCAATTGCAGTATTTGAAGTCACTTACTGTAGGAGTTGGCCTGATAATACTACAACAGTTTGGCGGAGTTAACGGCATTGCTTTTTATGCAAGTTCTATATTTGTCTCTGCTGGGTTTTCCAGAAGTATTGGAACAATAGCAATGGTTGTTGTTCAGATCCCAATGACAGCTTTGGGAGTAATTTTGATGGATAAATCTGGAAGACGACCCCTTTTACTGATCTCTGCATCAGGAACATGCTTAGGATGCTTCCTTGTATCTCTGTCATTCTTTTTGCAGGACTTGCATAAATGGAAGGAATTCAGTCCCATTCTGGCACTCGTCGGTGTACTGGTATATACAGGATCTTTCTCACTTGGCATGGGAGGAATACCCTGGGTTATAATGTCTGAGATATTTCCCATCAATGTGAAGGGTTCTGCTGGAAGCTTTGTTACATTTGTTCACTGGTTGTGTTCTTGGATTGTATCATATGCTTTTAACTTCCTCATGAGTTGGAATTCAGCAGGAACTTTCTTCATATTCTCTAGCATCTGTGGCCTCACCATTCTATTTGTAGCAAAACTAGTACCAGAGACCAAGGGGCGTACGCTAGAAGAAGTTCAAGCGTCTCTCAATCCATATCAGACAGTATCCAACAAAGAGATGAATTTGGCATATGATCCTGTAACAGAATTGCATGCATAA
Protein sequence

>Msa1038890

MKTKFKDFSRLLSSIREEASSVPTSILILTTLAAVSGSYVFGSAVGYSSPAQSGITDDLDLGVAEYSLFGSILTIGAMVGAIVSGSLADYAGRRAAMGFSELCCILGWLAIAVSKVAWWLYVGRLLLGCGMGILSYVVPIYIAEITPKDLRGRFTAVHQLMICFGVSLTYLIGAFFNWRLLAIIGTIPCLAQLLSLSFIPESPRWLAKVGRLERSESTLQHLRGKNVDISEEATEIREFTEASQQQTEANIFGLFQLQYLKSLTVGVGLIILQQFGGVNGIAFYASSIFVSAGFSRSIGTIAMVVVQIPMTALGVILMDKSGRRPLLLISASGTCLGCFLVSLSFFLQDLHKWKEFSPILALVGVLVYTGSFSLGMGGIPWVIMSEIFPINVKGSAGSFVTFVHWLCSWIVSYAFNFLMSWNSAGTFFIFSSICGLTILFVAKLVPETKGRTLEEVQASLNPYQTVSNKEMNLAYDPVTELHA*