AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1260510


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1260510 MtrunA17_Chr4g0061951 97.861 374 8 0 1 374 1 374 0.0 770
Msa1260510 MtrunA17_Chr4g0061931 67.273 220 48 5 159 374 1 200 4.75e-92 274
Msa1260510 MtrunA17_Chr4g0061941 83.117 154 25 1 1 153 1 154 1.97e-91 271
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1260510 AT5G08170.1 71.850 373 105 0 1 373 1 373 0.0 575
Msa1260510 AT5G08170.4 72.701 348 95 0 26 373 20 367 0.0 539
Msa1260510 AT5G08170.2 74.048 289 75 0 85 373 1 289 9.73e-164 460
Msa1260510 AT5G08170.3 74.048 289 75 0 85 373 1 289 9.73e-164 460
Msa1260510 AT5G08170.5 74.048 289 75 0 85 373 1 289 9.73e-164 460

Find 102 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTATCATTGCTCCACAATT+TGG 0.199735 8_2:-62570265 Msa1260510:CDS
CCTTAAGTTCATCCTCTATT+TGG 0.200717 8_2:+62572498 None:intergenic
AGATTAGCTCCAACGATTCT+TGG 0.296878 8_2:-62573427 Msa1260510:CDS
CATGATCCGGTAGCTGATTC+CGG 0.299009 8_2:+62573462 None:intergenic
CATAACAGAATGAATGATTA+TGG 0.320951 8_2:+62574237 None:intergenic
GTTGAGAGAATATTTCTAAA+TGG 0.323501 8_2:+62569589 None:intergenic
TGGTTGCCTCATGGATTATA+TGG 0.334289 8_2:-62572449 Msa1260510:intron
TTGGAGTTAGGAAGGTTATA+TGG 0.342843 8_2:-62572469 Msa1260510:CDS
TTGTGGGAATTGAAGGTTCC+AGG 0.350594 8_2:-62569664 Msa1260510:CDS
TTAAATATTGTAATACTTGT+TGG 0.351571 8_2:-62569440 Msa1260510:three_prime_UTR
TTAAGGCATATCTTGGAGTT+AGG 0.360625 8_2:-62572481 Msa1260510:CDS
GACAGGAACGCGCCGATAAT+TGG 0.368550 8_2:-62573905 Msa1260510:intron
TGACTGGACTTTCAATAGTT+GGG 0.371650 8_2:-62573229 Msa1260510:CDS
GGAGCCAAGCCAAGGCTTCC+TGG 0.371687 8_2:-62570334 Msa1260510:CDS
CTTTCACATGCCTGCAGAAT+GGG 0.381399 8_2:-62574025 Msa1260510:CDS
TCTTTCTCAGTCATGTATAA+TGG 0.381846 8_2:+62571350 None:intergenic
TCCTAGGTTGTGGGAATTGA+AGG 0.384816 8_2:-62569671 Msa1260510:intron
TTGACTGGACTTTCAATAGT+TGG 0.389120 8_2:-62573230 Msa1260510:CDS
AGAATGATTGATTAATTGCT+TGG 0.402577 8_2:-62569532 Msa1260510:three_prime_UTR
TCCCATTCTATGGTGCTTGA+AGG 0.402654 8_2:-62572879 Msa1260510:CDS
GGAAGGTCTTAGACAGAATT+CGG 0.404780 8_2:+62570215 None:intergenic
AAGATGGATGTTACTGTGAT+TGG 0.407228 8_2:-62573050 Msa1260510:CDS
CTTGTTCAATAGACACTCTT+CGG 0.412003 8_2:+62572547 None:intergenic
CTGGTGTGGTTCTTCTGTCT+TGG 0.415700 8_2:-62571490 Msa1260510:CDS
ACCATAGAATGGGAAAATCT+AGG 0.420979 8_2:+62572888 None:intergenic
GGCACCGTCACGCCAATTAT+CGG 0.422589 8_2:+62573893 None:intergenic
ACTCTCAGTGTTGGATGGGT+TGG 0.424047 8_2:-62573996 Msa1260510:CDS
GATGAACTTAAGGCATATCT+TGG 0.425040 8_2:-62572488 Msa1260510:CDS
CGCCTTCAAGCACCATAGAA+TGG 0.425702 8_2:+62572877 None:intergenic
CCAAATAGAGGATGAACTTA+AGG 0.428188 8_2:-62572498 Msa1260510:CDS
GATGCGGAGCATAGGATTGC+GGG 0.431755 8_2:-62573255 Msa1260510:CDS
ATGATCCGGTAGCTGATTCC+GGG 0.431760 8_2:+62573463 None:intergenic
ATTTGGCTCTTACTCAAATG+TGG 0.433728 8_2:+62572515 None:intergenic
ACCTCACTCTCAGTGTTGGA+TGG 0.433943 8_2:-62574001 Msa1260510:CDS
CTCAGTCATGTATAATGGAC+CGG 0.444715 8_2:+62571355 None:intergenic
GGCGGAAGCATCCATGTAGA+TGG 0.446962 8_2:-62572858 Msa1260510:CDS
GTGATCAAACTCCATGTTCC+CGG 0.448519 8_2:-62571374 Msa1260510:CDS
TCAAGTATAACTGATGCTAA+TGG 0.454381 8_2:-62571410 Msa1260510:CDS
AGAGAATATTTCTAAATGGC+TGG 0.455579 8_2:+62569593 None:intergenic
AAATGTTTAGGTTTAGAAGA+TGG 0.456598 8_2:-62573066 Msa1260510:intron
GCCTTCAAGCACCATAGAAT+GGG 0.457536 8_2:+62572878 None:intergenic
AGTGTCTATTGAACAAGAAC+AGG 0.457681 8_2:-62572541 Msa1260510:CDS
CGTTTGTGCTAGTTCAGCTC+AGG 0.468384 8_2:-62573808 Msa1260510:intron
TTTGGCTCTTACTCAAATGT+GGG 0.487275 8_2:+62572516 None:intergenic
ATTATACATGACTGAGAAAG+AGG 0.489453 8_2:-62571348 Msa1260510:CDS
AATCCTATGCTCCGCATCAT+CGG 0.491261 8_2:+62573260 None:intergenic
ATAGGATTGCGGGAATTGAC+TGG 0.492124 8_2:-62573245 Msa1260510:CDS
CCTCACTCTCAGTGTTGGAT+GGG 0.496268 8_2:-62574000 Msa1260510:CDS
CGTCGAAACACGACTTGCAC+GGG 0.499614 8_2:+62569475 None:intergenic
TGTATAATGGACCGGGAACA+TGG 0.510017 8_2:+62571363 None:intergenic
AGAGATTGCAGCCGCCACTC+TGG 0.511265 8_2:+62573848 None:intergenic
CTGAGCTGAACTAGCACAAA+CGG 0.515091 8_2:+62573809 None:intergenic
AGTACCAGGAAGCCTTGGCT+TGG 0.515607 8_2:+62570330 None:intergenic
GGCATATCTTGGAGTTAGGA+AGG 0.517285 8_2:-62572477 Msa1260510:CDS
TCAACGACTCTAACATGATC+CGG 0.518148 8_2:+62573449 None:intergenic
ATGACTGAGAAAGAGGCTGC+TGG 0.520293 8_2:-62571341 Msa1260510:CDS
ACCTGACAAAACAATCTCCC+TGG 0.521534 8_2:+62569646 None:intergenic
TGACTGAGAAAGAGGCTGCT+GGG 0.523464 8_2:-62571340 Msa1260510:CDS
AGTCTAGTACCAGGAAGCCT+TGG 0.524063 8_2:+62570325 None:intergenic
GCTTTCACATGCCTGCAGAA+TGG 0.524863 8_2:-62574026 Msa1260510:CDS
GACTGGACTTTCAATAGTTG+GGG 0.526517 8_2:-62573228 Msa1260510:CDS
CAAAACAGATGAGTAAAAGT+AGG 0.528722 8_2:-62574300 Msa1260510:five_prime_UTR
ATGTGAAAGCCATGAAAAGA+AGG 0.530372 8_2:+62574039 None:intergenic
GTCACGAAACCAAGAATCGT+TGG 0.536081 8_2:+62573418 None:intergenic
GACTGAGAAAGAGGCTGCTG+GGG 0.537133 8_2:-62571339 Msa1260510:CDS
AAACACAAGTTGAGCATGAA+CGG 0.539621 8_2:+62573872 None:intergenic
AAGGTTATATGGTTGCCTCA+TGG 0.541390 8_2:-62572458 Msa1260510:CDS
TTTGAGTAAGAGCCAAATAG+AGG 0.541729 8_2:-62572510 Msa1260510:CDS
GGGAACCTCACTCTCAGTGT+TGG 0.541951 8_2:-62574005 Msa1260510:CDS
ACAGGAGATGATGATACAAA+TGG 0.542165 8_2:-62571545 Msa1260510:intron
GATTCTTGGTTTCGTGACAT+TGG 0.542389 8_2:-62573413 Msa1260510:CDS
GAGTGAGGTTCCCATTCTGC+AGG 0.542593 8_2:+62574015 None:intergenic
TGCAATGTAAAAGTTTACAT+AGG 0.549734 8_2:+62570294 None:intergenic
CGCGCCGATAATTGGCGTGA+CGG 0.553368 8_2:-62573897 Msa1260510:CDS
TTTGTTGATTCCTAGGTTGT+GGG 0.556323 8_2:-62569680 Msa1260510:intron
AAAATACTCACTTCATGATG+AGG 0.559236 8_2:+62570193 None:intergenic
TTGTTTAACAGTTTGTAGTG+AGG 0.572818 8_2:-62573299 Msa1260510:intron
AATCCGATGATGCGGAGCAT+AGG 0.574874 8_2:-62573263 Msa1260510:CDS
TCTCACCTTCTCCATCTACA+TGG 0.576000 8_2:+62572847 None:intergenic
TCTTCAGATCTTTCATACTG+AGG 0.576852 8_2:+62571449 None:intergenic
AGTAAAAGTAGGACGCGAGA+CGG 0.578441 8_2:-62574289 Msa1260510:five_prime_UTR
TGTGGGAATTGAAGGTTCCA+GGG 0.582236 8_2:-62569663 Msa1260510:CDS
CCCATCCAACACTGAGAGTG+AGG 0.583588 8_2:+62574000 None:intergenic
CATTCTATGGTGCTTGAAGG+CGG 0.592030 8_2:-62572876 Msa1260510:CDS
AACATTGAAATCCGATGATG+CGG 0.592828 8_2:-62573271 Msa1260510:CDS
GAATGCCCGGAATCAGCTAC+CGG 0.593981 8_2:-62573468 Msa1260510:CDS
AAATACTCACTTCATGATGA+GGG 0.594366 8_2:+62570194 None:intergenic
TCAACTTGTGTTTGCCAGAG+TGG 0.603974 8_2:-62573862 Msa1260510:CDS
TCGTGTTTCGACGCACATTG+TGG 0.604809 8_2:-62569465 Msa1260510:three_prime_UTR
GAAGCAGCAAGTCTAGTACC+AGG 0.605026 8_2:+62570316 None:intergenic
CAAGACAGAAGAACCACACC+AGG 0.606639 8_2:+62571491 None:intergenic
ATGGACAACGGCGACAACAA+AGG 0.607967 8_2:+62574256 None:intergenic
AGGATGATGGAGCCAAGCCA+AGG 0.607977 8_2:-62570342 Msa1260510:CDS
TGGACTTTCAATAGTTGGGG+AGG 0.614804 8_2:-62573225 Msa1260510:intron
AGCATCCATGTAGATGGAGA+AGG 0.617041 8_2:-62572852 Msa1260510:intron
TCAGTCATGTATAATGGACC+GGG 0.622248 8_2:+62571356 None:intergenic
ACTCACTTCATGATGAGGGA+AGG 0.632244 8_2:+62570198 None:intergenic
TGATGCGGAGCATAGGATTG+CGG 0.633163 8_2:-62573256 Msa1260510:CDS
ACTTGTGTTTGCCAGAGTGG+CGG 0.660221 8_2:-62573859 Msa1260510:CDS
GAATGAATGATTATGGACAA+CGG 0.668220 8_2:+62574244 None:intergenic
GTTCAATAGACACTCTTCGG+TGG 0.670209 8_2:+62572550 None:intergenic
TACATACCATATAATCCATG+AGG 0.692612 8_2:+62572443 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTAATTTATTTTTTT+TGG - chr8_2:62573502-62573521 Msa1260510:intron 0.0%
!! ATAAATTAGATTTAGATATT+GGG - chr8_2:62573047-62573066 Msa1260510:CDS 10.0%
!! AAGTAAATAAAAATACTTAC+GGG + chr8_2:62569708-62569727 None:intergenic 15.0%
!! GAAGTAAATAAAAATACTTA+CGG + chr8_2:62569709-62569728 None:intergenic 15.0%
!! ACGATTTATAACAATTAAAA+TGG + chr8_2:62569912-62569931 None:intergenic 15.0%
!!! ATTTTAATTGTTATAAATCG+TGG - chr8_2:62569911-62569930 Msa1260510:intron 15.0%
!! ATTTCTGATTTATAAGTATT+GGG + chr8_2:62569943-62569962 None:intergenic 15.0%
!! AATTTCTGATTTATAAGTAT+TGG + chr8_2:62569944-62569963 None:intergenic 15.0%
!!! TTGAGTTTTATAAAATGTTT+AGG - chr8_2:62570600-62570619 Msa1260510:intron 15.0%
!! TTCATGAAAAAATTACATTT+AGG + chr8_2:62570920-62570939 None:intergenic 15.0%
!! ATCTATAAAATCATGATAAA+TGG + chr8_2:62571350-62571369 None:intergenic 15.0%
!!! TCTACAATAATTTGATAATT+AGG - chr8_2:62572854-62572873 Msa1260510:CDS 15.0%
!! CATAAATTAGATTTAGATAT+TGG - chr8_2:62573046-62573065 Msa1260510:CDS 15.0%
!!! AACTTTGATATGTATTTTAT+TGG - chr8_2:62574112-62574131 Msa1260510:intron 15.0%
!! TTAAATATTGTAATACTTGT+TGG - chr8_2:62574238-62574257 Msa1260510:five_prime_UTR 15.0%
!! TAAATCAGAAATTATAACGA+TGG - chr8_2:62569951-62569970 Msa1260510:intron 20.0%
!! TAATAGGCAAATTCTAATAT+GGG + chr8_2:62570127-62570146 None:intergenic 20.0%
!! TCAATTTGAAGACTAATTAA+TGG - chr8_2:62570516-62570535 Msa1260510:intron 20.0%
!! TTGAATTGATTATTATGTCT+TGG - chr8_2:62570558-62570577 Msa1260510:intron 20.0%
!! ATGAAAAAATTACATTTAGG+TGG + chr8_2:62570917-62570936 None:intergenic 20.0%
!!! ATGTAATTTTTTCATGAATG+AGG - chr8_2:62570922-62570941 Msa1260510:intron 20.0%
!! AGCAATAATATCAATTCATA+GGG + chr8_2:62571293-62571312 None:intergenic 20.0%
!! GTAGAATAAAAATACAATTG+AGG + chr8_2:62571768-62571787 None:intergenic 20.0%
!! TTTATTCTACAAATTGAATC+AGG - chr8_2:62571778-62571797 Msa1260510:intron 20.0%
!! ATACTTCTTAATAACAACAT+AGG + chr8_2:62572103-62572122 None:intergenic 20.0%
!! AAAAAGAAAGAAACACAATT+TGG + chr8_2:62572381-62572400 None:intergenic 20.0%
!! CATTAAGAGTTAAATATAAC+TGG + chr8_2:62572404-62572423 None:intergenic 20.0%
!! TTTAAATTGAACACTGTAAA+AGG - chr8_2:62573020-62573039 Msa1260510:intron 20.0%
! CATAACAGAATGAATGATTA+TGG + chr8_2:62569444-62569463 None:intergenic 25.0%
!! TAAAGGTCTAATCATTTTCA+CGG + chr8_2:62570043-62570062 None:intergenic 25.0%
! AATAGGCAAATTCTAATATG+GGG + chr8_2:62570126-62570145 None:intergenic 25.0%
! GTAATAGGCAAATTCTAATA+TGG + chr8_2:62570128-62570147 None:intergenic 25.0%
! ACAAATTATCAGAACGTAAT+AGG + chr8_2:62570143-62570162 None:intergenic 25.0%
!!! TTGTTTCTAATTATGTGCTT+TGG - chr8_2:62570159-62570178 Msa1260510:intron 25.0%
! ATCAATTCAATGAATCACAT+TGG + chr8_2:62570548-62570567 None:intergenic 25.0%
!! AAATGTTTAGGTTTAGAAGA+TGG - chr8_2:62570612-62570631 Msa1260510:intron 25.0%
! AAAATCTACCAAACATGTAT+TGG + chr8_2:62570754-62570773 None:intergenic 25.0%
!! AATACATGTTTGGTAGATTT+TGG - chr8_2:62570753-62570772 Msa1260510:intron 25.0%
! ATTTCAAAAGCAATTCAGTA+AGG + chr8_2:62571054-62571073 None:intergenic 25.0%
! GAGCAATAATATCAATTCAT+AGG + chr8_2:62571294-62571313 None:intergenic 25.0%
! ATGAATTGATATTATTGCTC+AGG - chr8_2:62571294-62571313 Msa1260510:intron 25.0%
! AATAAGTATTTACCATGAAC+TGG + chr8_2:62571483-62571502 None:intergenic 25.0%
!! TCATATTGATTATCACAGAA+TGG - chr8_2:62571632-62571651 Msa1260510:intron 25.0%
!!! TTTTAGAGTGAAACAAAGTA+TGG - chr8_2:62571670-62571689 Msa1260510:intron 25.0%
!!! TGGCTATTTTTGAATTAAGA+TGG + chr8_2:62571716-62571735 None:intergenic 25.0%
!!! TTCTTACAACTTTTTCTTTG+AGG - chr8_2:62571839-62571858 Msa1260510:intron 25.0%
!!! AGAAGTATGTTGTTTTATAC+AGG - chr8_2:62572115-62572134 Msa1260510:intron 25.0%
! ATTTGATGCTTTCAAATGAT+AGG - chr8_2:62572558-62572577 Msa1260510:CDS 25.0%
!!! ACTTCGTTTTAACCAATATA+AGG + chr8_2:62572584-62572603 None:intergenic 25.0%
! TTAAAACGAAGTTTAAGCAT+TGG - chr8_2:62572592-62572611 Msa1260510:intron 25.0%
!!! AGAGACTGAATATTTGTTTT+TGG - chr8_2:62572716-62572735 Msa1260510:intron 25.0%
!!! ACTGAATATTTGTTTTTGGT+TGG - chr8_2:62572720-62572739 Msa1260510:intron 25.0%
!!! TAGTTGCATTTTTCAAGTAT+TGG - chr8_2:62572749-62572768 Msa1260510:intron 25.0%
!! TTTTTCATATAATGAGTTGC+AGG + chr8_2:62573166-62573185 None:intergenic 25.0%
!! GGTGTAATTCTATATTTTTC+AGG - chr8_2:62573316-62573335 Msa1260510:intron 25.0%
!!! TTCTATATTTTTCAGGATGA+TGG - chr8_2:62573323-62573342 Msa1260510:intron 25.0%
! TGCAATGTAAAAGTTTACAT+AGG + chr8_2:62573387-62573406 None:intergenic 25.0%
!! GTAAACTTTTACATTGCAAA+TGG - chr8_2:62573389-62573408 Msa1260510:intron 25.0%
! ACAATTTGGAGATAAAAAGT+GGG - chr8_2:62573427-62573446 Msa1260510:CDS 25.0%
! TATAATGAAACTACTGGATT+GGG + chr8_2:62573869-62573888 None:intergenic 25.0%
! TAGTACTATAATGAAACTAC+TGG + chr8_2:62573875-62573894 None:intergenic 25.0%
! GTTTATGAACTGTAACATTT+AGG - chr8_2:62573930-62573949 Msa1260510:intron 25.0%
!!! TATAATGTTTGTTGATTCCT+AGG - chr8_2:62573991-62574010 Msa1260510:intron 25.0%
!! GTTGAGAGAATATTTCTAAA+TGG + chr8_2:62574092-62574111 None:intergenic 25.0%
! AGAATGATTGATTAATTGCT+TGG - chr8_2:62574146-62574165 Msa1260510:intron 25.0%
CAAAACAGATGAGTAAAAGT+AGG - chr8_2:62569378-62569397 Msa1260510:three_prime_UTR 30.0%
GAATGAATGATTATGGACAA+CGG + chr8_2:62569437-62569456 None:intergenic 30.0%
TTGAGGGAAAATAATGAAGA+TGG + chr8_2:62569544-62569563 None:intergenic 30.0%
AATCGTTTCTGTTTCATTGA+GGG + chr8_2:62569560-62569579 None:intergenic 30.0%
CAAGCTTAATCATCATAACA+TGG + chr8_2:62569741-62569760 None:intergenic 30.0%
!! TGATTTATAAGTATTGGGCT+GGG + chr8_2:62569938-62569957 None:intergenic 30.0%
!! TCTTGAACATTTTCAAGCAT+TGG - chr8_2:62570093-62570112 Msa1260510:intron 30.0%
TCTAATTATGTGCTTTGGTT+TGG - chr8_2:62570164-62570183 Msa1260510:intron 30.0%
! AGTTTTTCTGACCATTTTCA+GGG - chr8_2:62570298-62570317 Msa1260510:CDS 30.0%
TTGTTTAACAGTTTGTAGTG+AGG - chr8_2:62570379-62570398 Msa1260510:intron 30.0%
GATTATTATGTCTTGGTTGT+TGG - chr8_2:62570565-62570584 Msa1260510:intron 30.0%
! ACCTAACCTTCTTTTTAACA+AGG + chr8_2:62570665-62570684 None:intergenic 30.0%
TGTTAAAAAGAAGGTTAGGT+TGG - chr8_2:62570665-62570684 Msa1260510:intron 30.0%
GAGTTAATGCAGTGATTTAT+TGG - chr8_2:62570852-62570871 Msa1260510:intron 30.0%
! TTTTCATGAATGAGGATTAG+TGG - chr8_2:62570930-62570949 Msa1260510:intron 30.0%
AAGGATATCTAAGTTTCAAG+CGG + chr8_2:62571035-62571054 None:intergenic 30.0%
TACATACCATATAATCCATG+AGG + chr8_2:62571238-62571257 None:intergenic 30.0%
!!! CATTGGTTTTATGTTGACTT+CGG + chr8_2:62571415-62571434 None:intergenic 30.0%
TGAACTAATTGAGTAAGATC+TGG + chr8_2:62571615-62571634 None:intergenic 30.0%
!! CTTTGTTTCACTCTAAAATG+CGG + chr8_2:62571668-62571687 None:intergenic 30.0%
AATTCAAAAATAGCCAAGTC+TGG - chr8_2:62571720-62571739 Msa1260510:intron 30.0%
ATTCAAAAATAGCCAAGTCT+GGG - chr8_2:62571721-62571740 Msa1260510:intron 30.0%
ATGTTATTAATACCCAGACT+TGG + chr8_2:62571736-62571755 None:intergenic 30.0%
TACAAATTGAATCAGGAAGT+TGG - chr8_2:62571785-62571804 Msa1260510:intron 30.0%
TCTAATAAATATCCCAGCTT+GGG + chr8_2:62572007-62572026 None:intergenic 30.0%
ACAGAGACACTCTAATAAAT+GGG - chr8_2:62572034-62572053 Msa1260510:intron 30.0%
ATAAATGGGATACACGATTT+AGG - chr8_2:62572048-62572067 Msa1260510:intron 30.0%
! ATACACGATTTAGGTTCAAA+AGG - chr8_2:62572057-62572076 Msa1260510:intron 30.0%
TCAAGTATAACTGATGCTAA+TGG - chr8_2:62572268-62572287 Msa1260510:intron 30.0%
TCTTTCTCAGTCATGTATAA+TGG + chr8_2:62572331-62572350 None:intergenic 30.0%
ATTATACATGACTGAGAAAG+AGG - chr8_2:62572330-62572349 Msa1260510:intron 30.0%
!! AGTGTATCTTTGTTTCTGTA+TGG - chr8_2:62572479-62572498 Msa1260510:CDS 30.0%
!! TTTGAAAGCATCAAATCATC+TGG + chr8_2:62572554-62572573 None:intergenic 30.0%
! TCAAATGATAGGCCTTATAT+TGG - chr8_2:62572569-62572588 Msa1260510:intron 30.0%
TGGATGTAGTGTTTCTTTAA+TGG - chr8_2:62572769-62572788 Msa1260510:intron 30.0%
ATTGTAGAGATGCAATCATA+GGG + chr8_2:62572842-62572861 None:intergenic 30.0%
TATTGTAGAGATGCAATCAT+AGG + chr8_2:62572843-62572862 None:intergenic 30.0%
TATCCTATTGGAAACAAAAC+TGG + chr8_2:62572904-62572923 None:intergenic 30.0%
!!! AGTTTTGTTTCCAATAGGAT+AGG - chr8_2:62572903-62572922 Msa1260510:CDS 30.0%
GATATTACATCCTATCCTAT+TGG + chr8_2:62572916-62572935 None:intergenic 30.0%
ATCTGAGTAGTAAATGCAAT+AGG + chr8_2:62572965-62572984 None:intergenic 30.0%
TATTCATTCTTAACCATACC+AGG + chr8_2:62573223-62573242 None:intergenic 30.0%
TACACAATATAAACCTCTAC+TGG - chr8_2:62573286-62573305 Msa1260510:CDS 30.0%
!! CACTTTTTATCTCCAAATTG+TGG + chr8_2:62573428-62573447 None:intergenic 30.0%
CACAATTTGGAGATAAAAAG+TGG - chr8_2:62573426-62573445 Msa1260510:CDS 30.0%
AAATACTCACTTCATGATGA+GGG + chr8_2:62573487-62573506 None:intergenic 30.0%
AAAATACTCACTTCATGATG+AGG + chr8_2:62573488-62573507 None:intergenic 30.0%
!! CTTATTCATGATGATTTGGT+TGG + chr8_2:62573802-62573821 None:intergenic 30.0%
ATCGCTTATTCATGATGATT+TGG + chr8_2:62573806-62573825 None:intergenic 30.0%
CTATAATGAAACTACTGGAT+TGG + chr8_2:62573870-62573889 None:intergenic 30.0%
!!! GTATCACTTTTGAGTTGTTT+TGG - chr8_2:62573952-62573971 Msa1260510:intron 30.0%
! AGAGAATATTTCTAAATGGC+TGG + chr8_2:62574088-62574107 None:intergenic 30.0%
! GATTTTCAAATGCAACTAGT+TGG - chr8_2:62574177-62574196 Msa1260510:intron 30.0%
CAATCGTTTCTGTTTCATTG+AGG + chr8_2:62569561-62569580 None:intergenic 35.0%
ATGTGAAAGCCATGAAAAGA+AGG + chr8_2:62569642-62569661 None:intergenic 35.0%
! AAACACAAGTTGAGCATGAA+CGG + chr8_2:62569809-62569828 None:intergenic 35.0%
!! CTGATTTATAAGTATTGGGC+TGG + chr8_2:62569939-62569958 None:intergenic 35.0%
ATTTCGTCTCTCAGAAGTAA+AGG + chr8_2:62570060-62570079 None:intergenic 35.0%
!! TTATGTGCTTTGGTTTGGTT+CGG - chr8_2:62570169-62570188 Msa1260510:intron 35.0%
!! GTTCGGTTCATGATTTTAGT+GGG - chr8_2:62570186-62570205 Msa1260510:intron 35.0%
! GAGTTTTTCTGACCATTTTC+AGG - chr8_2:62570297-62570316 Msa1260510:CDS 35.0%
TCAAAGAATTGCCCTGAAAA+TGG + chr8_2:62570312-62570331 None:intergenic 35.0%
AACATTGAAATCCGATGATG+CGG - chr8_2:62570407-62570426 Msa1260510:intron 35.0%
TTGACTGGACTTTCAATAGT+TGG - chr8_2:62570448-62570467 Msa1260510:intron 35.0%
TGACTGGACTTTCAATAGTT+GGG - chr8_2:62570449-62570468 Msa1260510:intron 35.0%
AAGATGGATGTTACTGTGAT+TGG - chr8_2:62570628-62570647 Msa1260510:intron 35.0%
! GCCTTGTTAAAAAGAAGGTT+AGG - chr8_2:62570661-62570680 Msa1260510:intron 35.0%
! ATTTATTCACGTTCTAGCTG+TGG - chr8_2:62570703-62570722 Msa1260510:intron 35.0%
TGACACTACCAATACATGTT+TGG - chr8_2:62570743-62570762 Msa1260510:intron 35.0%
! TCCTAGATTTTCCCATTCTA+TGG - chr8_2:62570789-62570808 Msa1260510:intron 35.0%
ACCATAGAATGGGAAAATCT+AGG + chr8_2:62570793-62570812 None:intergenic 35.0%
TGATGTTTAATCACAAGAGC+TGG + chr8_2:62570890-62570909 None:intergenic 35.0%
! AATGAGGATTAGTGGCAATT+AGG - chr8_2:62570938-62570957 Msa1260510:intron 35.0%
! TAGCAATTTTTCCTTCCTTC+AGG - chr8_2:62571094-62571113 Msa1260510:intron 35.0%
TAATACATGTTCCTGAAGGA+AGG + chr8_2:62571108-62571127 None:intergenic 35.0%
CTTGTTCAATAGACACTCTT+CGG + chr8_2:62571134-62571153 None:intergenic 35.0%
AGTGTCTATTGAACAAGAAC+AGG - chr8_2:62571137-62571156 Msa1260510:intron 35.0%
!! TTTGGCTCTTACTCAAATGT+GGG + chr8_2:62571165-62571184 None:intergenic 35.0%
!! ATTTGGCTCTTACTCAAATG+TGG + chr8_2:62571166-62571185 None:intergenic 35.0%
TTTGAGTAAGAGCCAAATAG+AGG - chr8_2:62571168-62571187 Msa1260510:intron 35.0%
CCTTAAGTTCATCCTCTATT+TGG + chr8_2:62571183-62571202 None:intergenic 35.0%
CCAAATAGAGGATGAACTTA+AGG - chr8_2:62571180-62571199 Msa1260510:intron 35.0%
GATGAACTTAAGGCATATCT+TGG - chr8_2:62571190-62571209 Msa1260510:intron 35.0%
TTAAGGCATATCTTGGAGTT+AGG - chr8_2:62571197-62571216 Msa1260510:intron 35.0%
TTGGAGTTAGGAAGGTTATA+TGG - chr8_2:62571209-62571228 Msa1260510:intron 35.0%
CGAAGTCAACATAAAACCAA+TGG - chr8_2:62571413-62571432 Msa1260510:CDS 35.0%
TTATATAGCTGCATCTGCAA+TGG + chr8_2:62571448-62571467 None:intergenic 35.0%
TGGCAAGAGAATAACTTATG+TGG - chr8_2:62571554-62571573 Msa1260510:intron 35.0%
GTCTAATAAATATCCCAGCT+TGG + chr8_2:62572008-62572027 None:intergenic 35.0%
! CATTTATTAGAGTGTCTCTG+TGG + chr8_2:62572035-62572054 None:intergenic 35.0%
CACAGAGACACTCTAATAAA+TGG - chr8_2:62572033-62572052 Msa1260510:intron 35.0%
ACAGGAGATGATGATACAAA+TGG - chr8_2:62572133-62572152 Msa1260510:intron 35.0%
!!! ATAACATGTGCTGTTTTGTG+AGG - chr8_2:62572164-62572183 Msa1260510:intron 35.0%
TCTTCAGATCTTTCATACTG+AGG + chr8_2:62572232-62572251 None:intergenic 35.0%
AGATACACTCTGATGGTAAT+AGG + chr8_2:62572468-62572487 None:intergenic 35.0%
GAAACAAAGATACACTCTGA+TGG + chr8_2:62572475-62572494 None:intergenic 35.0%
! AGTTTAAGATGTCATGTTCG+CGG - chr8_2:62572513-62572532 Msa1260510:CDS 35.0%
! GGTCTATATAGTTTTCCATG+TGG + chr8_2:62572658-62572677 None:intergenic 35.0%
AGTGGACAGCAAAAATTCTT+AGG + chr8_2:62572679-62572698 None:intergenic 35.0%
!! ATTTTTGCTGTCCACTTTGA+AGG - chr8_2:62572683-62572702 Msa1260510:intron 35.0%
TTCATCTGAATCCTTCAAAG+TGG + chr8_2:62572697-62572716 None:intergenic 35.0%
TGTTTCTTTAATGGAGTCTC+TGG - chr8_2:62572778-62572797 Msa1260510:intron 35.0%
TGGTTAAATGGTAACCTCAA+AGG - chr8_2:62572805-62572824 Msa1260510:intron 35.0%
!!! AAGCCAGTTTTGTTTCCAAT+AGG - chr8_2:62572898-62572917 Msa1260510:CDS 35.0%
TAGCAAGATTGATTGATACC+TGG - chr8_2:62573202-62573221 Msa1260510:intron 35.0%
AGATTGATTGATACCTGGTA+TGG - chr8_2:62573207-62573226 Msa1260510:intron 35.0%
TTTCCAAGTGATGAAGTTTG+TGG - chr8_2:62573662-62573681 Msa1260510:intron 35.0%
!! TTTGTTGATTCCTAGGTTGT+GGG - chr8_2:62573998-62574017 Msa1260510:CDS 35.0%
! GAAAACACGCCTTCTTTTCA+TGG - chr8_2:62569630-62569649 Msa1260510:CDS 40.0%
GCTTGATGTTATTGTGTGAC+AGG - chr8_2:62569756-62569775 Msa1260510:intron 40.0%
! ATCATTTTCACGGTTGAGAC+AGG + chr8_2:62570033-62570052 None:intergenic 40.0%
!!! CATTTTCAAGCATTGGTCCA+TGG - chr8_2:62570100-62570119 Msa1260510:intron 40.0%
CAAATTCTAATATGGGGCCA+TGG + chr8_2:62570120-62570139 None:intergenic 40.0%
!! GGTTCGGTTCATGATTTTAG+TGG - chr8_2:62570185-62570204 Msa1260510:intron 40.0%
TCAACGACTCTAACATGATC+CGG + chr8_2:62570232-62570251 None:intergenic 40.0%
! AGATTAGCTCCAACGATTCT+TGG - chr8_2:62570251-62570270 Msa1260510:CDS 40.0%
GATTCTTGGTTTCGTGACAT+TGG - chr8_2:62570265-62570284 Msa1260510:CDS 40.0%
TGGTCAGAAAAACTCACAGT+GGG + chr8_2:62570292-62570311 None:intergenic 40.0%
ATGGTCAGAAAAACTCACAG+TGG + chr8_2:62570293-62570312 None:intergenic 40.0%
GACTGGACTTTCAATAGTTG+GGG - chr8_2:62570450-62570469 Msa1260510:intron 40.0%
!! CGACAGCCTTGTTAAAAAGA+AGG - chr8_2:62570656-62570675 Msa1260510:intron 40.0%
! GGTAGATTTTGGATGTTGAG+AGG - chr8_2:62570764-62570783 Msa1260510:intron 40.0%
CCTGAAGACAAAAGAGTAGA+CGG + chr8_2:62570998-62571017 None:intergenic 40.0%
GTGGTAATACATGTTCCTGA+AGG + chr8_2:62571112-62571131 None:intergenic 40.0%
AAGGTTATATGGTTGCCTCA+TGG - chr8_2:62571220-62571239 Msa1260510:intron 40.0%
! TGGTTGCCTCATGGATTATA+TGG - chr8_2:62571229-62571248 Msa1260510:intron 40.0%
GCAATGGTTCATTACTCCAT+TGG + chr8_2:62571432-62571451 None:intergenic 40.0%
GATTCAACACAAGAACAGAC+AGG + chr8_2:62571529-62571548 None:intergenic 40.0%
TTCTTGTGTTGAATCCACTC+TGG - chr8_2:62571534-62571553 Msa1260510:CDS 40.0%
AAGTTATTCTCTTGCCAGAG+TGG + chr8_2:62571551-62571570 None:intergenic 40.0%
GCTATCACCATGTACTTATG+AGG - chr8_2:62571587-62571606 Msa1260510:intron 40.0%
! TCTGGAACCTCATAAGTACA+TGG + chr8_2:62571597-62571616 None:intergenic 40.0%
!! TTGAATCAGGAAGTTGGTAG+TGG - chr8_2:62571791-62571810 Msa1260510:intron 40.0%
TGGGAACTTCTTTGAATGTG+TGG + chr8_2:62571988-62572007 None:intergenic 40.0%
ATTCAAAGAAGTTCCCAAGC+TGG - chr8_2:62571991-62572010 Msa1260510:intron 40.0%
TTCAAAGAAGTTCCCAAGCT+GGG - chr8_2:62571992-62572011 Msa1260510:intron 40.0%
!! TCAGTCATGTATAATGGACC+GGG + chr8_2:62572325-62572344 None:intergenic 40.0%
!! CTCAGTCATGTATAATGGAC+CGG + chr8_2:62572326-62572345 None:intergenic 40.0%
TGTCGCGAAACACATATCAT+TGG - chr8_2:62572624-62572643 Msa1260510:intron 40.0%
GCGAAACACATATCATTGGA+CGG - chr8_2:62572628-62572647 Msa1260510:intron 40.0%
CGAAACACATATCATTGGAC+GGG - chr8_2:62572629-62572648 Msa1260510:intron 40.0%
GATATTGGGCATGCAATCTT+TGG - chr8_2:62573061-62573080 Msa1260510:intron 40.0%
TGCAGGATAGTCTCATCATT+AGG + chr8_2:62573149-62573168 None:intergenic 40.0%
TAAACCTCTACTGGATGTTC+TGG - chr8_2:62573295-62573314 Msa1260510:intron 40.0%
GCTATCATTGCTCCACAATT+TGG - chr8_2:62573413-62573432 Msa1260510:CDS 40.0%
GGAAGGTCTTAGACAGAATT+CGG + chr8_2:62573466-62573485 None:intergenic 40.0%
CACTAACTACTGCAGTTATG+TGG - chr8_2:62573611-62573630 Msa1260510:intron 40.0%
TAGTTTGAGCCACAGATCTT+CGG + chr8_2:62573688-62573707 None:intergenic 40.0%
! GATTTGGTTGGATGAGAACA+TGG + chr8_2:62573790-62573809 None:intergenic 40.0%
!! GTTTGTTGATTCCTAGGTTG+TGG - chr8_2:62573997-62574016 Msa1260510:CDS 40.0%
AGTAAAAGTAGGACGCGAGA+CGG - chr8_2:62569389-62569408 Msa1260510:three_prime_UTR 45.0%
! CGGCGACAACAAAGGATTTT+AGG + chr8_2:62569417-62569436 None:intergenic 45.0%
CTTTCACATGCCTGCAGAAT+GGG - chr8_2:62569653-62569672 Msa1260510:CDS 45.0%
TCAACTTGTGTTTGCCAGAG+TGG - chr8_2:62569816-62569835 Msa1260510:intron 45.0%
CTGAGCTGAACTAGCACAAA+CGG + chr8_2:62569872-62569891 None:intergenic 45.0%
!! GATTTTAGTGGGAGAATGCC+CGG - chr8_2:62570197-62570216 Msa1260510:intron 45.0%
GTCACGAAACCAAGAATCGT+TGG + chr8_2:62570263-62570282 None:intergenic 45.0%
AATCCTATGCTCCGCATCAT+CGG + chr8_2:62570421-62570440 None:intergenic 45.0%
ATAGGATTGCGGGAATTGAC+TGG - chr8_2:62570433-62570452 Msa1260510:intron 45.0%
TGGACTTTCAATAGTTGGGG+AGG - chr8_2:62570453-62570472 Msa1260510:intron 45.0%
TCCCATTCTATGGTGCTTGA+AGG - chr8_2:62570799-62570818 Msa1260510:intron 45.0%
GCCTTCAAGCACCATAGAAT+GGG + chr8_2:62570803-62570822 None:intergenic 45.0%
CATTCTATGGTGCTTGAAGG+CGG - chr8_2:62570802-62570821 Msa1260510:intron 45.0%
AGCATCCATGTAGATGGAGA+AGG - chr8_2:62570826-62570845 Msa1260510:intron 45.0%
TCTCACCTTCTCCATCTACA+TGG + chr8_2:62570834-62570853 None:intergenic 45.0%
! CCGTCTACTCTTTTGTCTTC+AGG - chr8_2:62570995-62571014 Msa1260510:intron 45.0%
GTTCAATAGACACTCTTCGG+TGG + chr8_2:62571131-62571150 None:intergenic 45.0%
GGCATATCTTGGAGTTAGGA+AGG - chr8_2:62571201-62571220 Msa1260510:intron 45.0%
CAAGTTGCTCAACCAGTTCA+TGG - chr8_2:62571468-62571487 Msa1260510:CDS 45.0%
GTGATCAAACTCCATGTTCC+CGG - chr8_2:62572304-62572323 Msa1260510:intron 45.0%
!! TGTATAATGGACCGGGAACA+TGG + chr8_2:62572318-62572337 None:intergenic 45.0%
! GTTCGCGGTTTTCTTTTCTG+TGG - chr8_2:62572528-62572547 Msa1260510:CDS 45.0%
TTAATGGAGTCTCTGGTGTC+TGG - chr8_2:62572785-62572804 Msa1260510:intron 45.0%
GTCTCTGGTGTCTGGTTAAA+TGG - chr8_2:62572793-62572812 Msa1260510:intron 45.0%
GCAATCATAGGGTTACCACT+GGG + chr8_2:62572831-62572850 None:intergenic 45.0%
TGCAATCATAGGGTTACCAC+TGG + chr8_2:62572832-62572851 None:intergenic 45.0%
GCTGAGAGCAAAACAATGAG+AGG + chr8_2:62572997-62573016 None:intergenic 45.0%
!! GCATGCAATCTTTGGAATGC+TGG - chr8_2:62573069-62573088 Msa1260510:intron 45.0%
GAATGCTGGTAGTTAGCAGT+CGG - chr8_2:62573083-62573102 Msa1260510:intron 45.0%
TACACCAGAACATCCAGTAG+AGG + chr8_2:62573302-62573321 None:intergenic 45.0%
ACTCACTTCATGATGAGGGA+AGG + chr8_2:62573483-62573502 None:intergenic 45.0%
TTGGGACATTTGCGAGTTTG+TGG + chr8_2:62573851-62573870 None:intergenic 45.0%
TCCTAGGTTGTGGGAATTGA+AGG - chr8_2:62574007-62574026 Msa1260510:CDS 45.0%
ACCTTCAATTCCCACAACCT+AGG + chr8_2:62574011-62574030 None:intergenic 45.0%
TTGTGGGAATTGAAGGTTCC+AGG - chr8_2:62574014-62574033 Msa1260510:CDS 45.0%
TGTGGGAATTGAAGGTTCCA+GGG - chr8_2:62574015-62574034 Msa1260510:CDS 45.0%
!! TCCAGGGAGATTGTTTTGTC+AGG - chr8_2:62574031-62574050 Msa1260510:CDS 45.0%
ACCTGACAAAACAATCTCCC+TGG + chr8_2:62574035-62574054 None:intergenic 45.0%
!! AGGGAGATTGTTTTGTCAGG+TGG - chr8_2:62574034-62574053 Msa1260510:CDS 45.0%
!!! TTTAATTTTAATTATAAAGT+CGG + chr8_2:62570010-62570029 None:intergenic 5.0%
!!! TTTATAGATTTTTTTTTTTT+TGG - chr8_2:62571361-62571380 Msa1260510:CDS 5.0%
!!! TTATAGATTTTTTTTTTTTT+GGG - chr8_2:62571362-62571381 Msa1260510:CDS 5.0%
ATGGACAACGGCGACAACAA+AGG + chr8_2:62569425-62569444 None:intergenic 50.0%
GCTTTCACATGCCTGCAGAA+TGG - chr8_2:62569652-62569671 Msa1260510:CDS 50.0%
! ACCTCACTCTCAGTGTTGGA+TGG - chr8_2:62569677-62569696 Msa1260510:intron 50.0%
! CCTCACTCTCAGTGTTGGAT+GGG - chr8_2:62569678-62569697 Msa1260510:intron 50.0%
! ACTCTCAGTGTTGGATGGGT+TGG - chr8_2:62569682-62569701 Msa1260510:intron 50.0%
ACTTGTGTTTGCCAGAGTGG+CGG - chr8_2:62569819-62569838 Msa1260510:intron 50.0%
CGTTTGTGCTAGTTCAGCTC+AGG - chr8_2:62569870-62569889 Msa1260510:intron 50.0%
TGTGCTAGTTCAGCTCAGGT+TGG - chr8_2:62569874-62569893 Msa1260510:intron 50.0%
! ATGATCCGGTAGCTGATTCC+GGG + chr8_2:62570218-62570237 None:intergenic 50.0%
! CATGATCCGGTAGCTGATTC+CGG + chr8_2:62570219-62570238 None:intergenic 50.0%
AATCCGATGATGCGGAGCAT+AGG - chr8_2:62570415-62570434 Msa1260510:intron 50.0%
TGATGCGGAGCATAGGATTG+CGG - chr8_2:62570422-62570441 Msa1260510:intron 50.0%
CGCCTTCAAGCACCATAGAA+TGG + chr8_2:62570804-62570823 None:intergenic 50.0%
!!! ATGTGCTGTTTTGTGAGGCC+TGG - chr8_2:62572169-62572188 Msa1260510:intron 50.0%
CAAGACAGAAGAACCACACC+AGG + chr8_2:62572190-62572209 None:intergenic 50.0%
CTGGTGTGGTTCTTCTGTCT+TGG - chr8_2:62572188-62572207 Msa1260510:intron 50.0%
ATGACTGAGAAAGAGGCTGC+TGG - chr8_2:62572337-62572356 Msa1260510:intron 50.0%
TGACTGAGAAAGAGGCTGCT+GGG - chr8_2:62572338-62572357 Msa1260510:intron 50.0%
TCATTGGACGGGATACCACA+TGG - chr8_2:62572640-62572659 Msa1260510:intron 50.0%
AGTCTAGTACCAGGAAGCCT+TGG + chr8_2:62573356-62573375 None:intergenic 50.0%
GAAGCAGCAAGTCTAGTACC+AGG + chr8_2:62573365-62573384 None:intergenic 50.0%
CGGCCACAAACTTCATCACT+TGG + chr8_2:62573668-62573687 None:intergenic 50.0%
AGTTTGTGGCCGAAGATCTG+TGG - chr8_2:62573676-62573695 Msa1260510:intron 50.0%
TCGTGTTTCGACGCACATTG+TGG - chr8_2:62574213-62574232 Msa1260510:intron 50.0%
GAGTGAGGTTCCCATTCTGC+AGG + chr8_2:62569666-62569685 None:intergenic 55.0%
GGGAACCTCACTCTCAGTGT+TGG - chr8_2:62569673-62569692 Msa1260510:intron 55.0%
CCCATCCAACACTGAGAGTG+AGG + chr8_2:62569681-62569700 None:intergenic 55.0%
! GACAGGAACGCGCCGATAAT+TGG - chr8_2:62569773-62569792 Msa1260510:intron 55.0%
GGCACCGTCACGCCAATTAT+CGG + chr8_2:62569788-62569807 None:intergenic 55.0%
GAATGCCCGGAATCAGCTAC+CGG - chr8_2:62570210-62570229 Msa1260510:CDS 55.0%
GATGCGGAGCATAGGATTGC+GGG - chr8_2:62570423-62570442 Msa1260510:intron 55.0%
!! GGCGGAAGCATCCATGTAGA+TGG - chr8_2:62570820-62570839 Msa1260510:intron 55.0%
! CTGTTTTGTGAGGCCTGGTG+TGG - chr8_2:62572174-62572193 Msa1260510:intron 55.0%
GACTGAGAAAGAGGCTGCTG+GGG - chr8_2:62572339-62572358 Msa1260510:intron 55.0%
! AGAGGCTGCTGGGGTTTTTC+AGG - chr8_2:62572348-62572367 Msa1260510:intron 55.0%
TGGTAACCTCAAAGGCCCAG+TGG - chr8_2:62572813-62572832 Msa1260510:intron 55.0%
!! AGGATGATGGAGCCAAGCCA+AGG - chr8_2:62573336-62573355 Msa1260510:intron 55.0%
AGTACCAGGAAGCCTTGGCT+TGG + chr8_2:62573351-62573370 None:intergenic 55.0%
CGTCGAAACACGACTTGCAC+GGG + chr8_2:62574206-62574225 None:intergenic 55.0%
GCGTCGAAACACGACTTGCA+CGG + chr8_2:62574207-62574226 None:intergenic 55.0%
! CGCGCCGATAATTGGCGTGA+CGG - chr8_2:62569781-62569800 Msa1260510:intron 60.0%
AGAGATTGCAGCCGCCACTC+TGG + chr8_2:62569833-62569852 None:intergenic 60.0%
GGGTTACCACTGGGCCTTTG+AGG + chr8_2:62572822-62572841 None:intergenic 60.0%
GGAGCCAAGCCAAGGCTTCC+TGG - chr8_2:62573344-62573363 Msa1260510:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 62569353 62574347 62569353 ID=Msa1260510;Name=Msa1260510
chr8_2 mRNA 62569353 62574347 62569353 ID=Msa1260510-mRNA-1;Parent=Msa1260510;Name=Msa1260510-mRNA-1;_AED=0.34;_eAED=0.34;_QI=156|1|1|1|0.9|0.81|11|251|374
chr8_2 exon 62569353 62569687 62569353 ID=Msa1260510-mRNA-1:exon:19873;Parent=Msa1260510-mRNA-1
chr8_2 exon 62570204 62570362 62570204 ID=Msa1260510-mRNA-1:exon:19872;Parent=Msa1260510-mRNA-1
chr8_2 exon 62571331 62571563 62571331 ID=Msa1260510-mRNA-1:exon:19871;Parent=Msa1260510-mRNA-1
chr8_2 exon 62572450 62572584 62572450 ID=Msa1260510-mRNA-1:exon:19870;Parent=Msa1260510-mRNA-1
chr8_2 exon 62572853 62572931 62572853 ID=Msa1260510-mRNA-1:exon:19869;Parent=Msa1260510-mRNA-1
chr8_2 exon 62573023 62573078 62573023 ID=Msa1260510-mRNA-1:exon:19868;Parent=Msa1260510-mRNA-1
chr8_2 exon 62573226 62573310 62573226 ID=Msa1260510-mRNA-1:exon:19867;Parent=Msa1260510-mRNA-1
chr8_2 exon 62573406 62573495 62573406 ID=Msa1260510-mRNA-1:exon:19866;Parent=Msa1260510-mRNA-1
chr8_2 exon 62573809 62573922 62573809 ID=Msa1260510-mRNA-1:exon:19865;Parent=Msa1260510-mRNA-1
chr8_2 exon 62573993 62574128 62573993 ID=Msa1260510-mRNA-1:exon:19864;Parent=Msa1260510-mRNA-1
chr8_2 exon 62574238 62574347 62574238 ID=Msa1260510-mRNA-1:exon:19863;Parent=Msa1260510-mRNA-1
chr8_2 five_prime_UTR 62574238 62574347 62574238 ID=Msa1260510-mRNA-1:five_prime_utr;Parent=Msa1260510-mRNA-1
chr8_2 five_prime_UTR 62574083 62574128 62574083 ID=Msa1260510-mRNA-1:five_prime_utr;Parent=Msa1260510-mRNA-1
chr8_2 CDS 62573993 62574082 62573993 ID=Msa1260510-mRNA-1:cds;Parent=Msa1260510-mRNA-1
chr8_2 CDS 62573809 62573922 62573809 ID=Msa1260510-mRNA-1:cds;Parent=Msa1260510-mRNA-1
chr8_2 CDS 62573406 62573495 62573406 ID=Msa1260510-mRNA-1:cds;Parent=Msa1260510-mRNA-1
chr8_2 CDS 62573226 62573310 62573226 ID=Msa1260510-mRNA-1:cds;Parent=Msa1260510-mRNA-1
chr8_2 CDS 62573023 62573078 62573023 ID=Msa1260510-mRNA-1:cds;Parent=Msa1260510-mRNA-1
chr8_2 CDS 62572853 62572931 62572853 ID=Msa1260510-mRNA-1:cds;Parent=Msa1260510-mRNA-1
chr8_2 CDS 62572450 62572584 62572450 ID=Msa1260510-mRNA-1:cds;Parent=Msa1260510-mRNA-1
chr8_2 CDS 62571331 62571563 62571331 ID=Msa1260510-mRNA-1:cds;Parent=Msa1260510-mRNA-1
chr8_2 CDS 62570204 62570362 62570204 ID=Msa1260510-mRNA-1:cds;Parent=Msa1260510-mRNA-1
chr8_2 CDS 62569604 62569687 62569604 ID=Msa1260510-mRNA-1:cds;Parent=Msa1260510-mRNA-1
chr8_2 three_prime_UTR 62569353 62569603 62569353 ID=Msa1260510-mRNA-1:three_prime_utr;Parent=Msa1260510-mRNA-1
Gene Sequence

>Msa1260510

ATGATGCATCTAGAAAACACGCCTTCTTTTCATGGCTTTCACATGCCTGCAGAATGGGAACCTCACTCTCAGTGTTGGATGGGTTGGCCCGAACGCGCCGATAATTGGCGTGACGGTGCCGTTCATGCTCAACTTGTGTTTGCCAGAGTGGCGGCTGCAATCTCTAGATTCGAGAAAGTCACCGTTTGTGCTAGTTCAGCTCAGTGGGAGAATGCCCGGAATCAGCTACCGGATCATGTTAGAGTCGTTGAGATTAGCTCCAACGATTCTTGGTTTCGTGACATTGGACCCACTTTTGTAGTGAGGAGAGAAACATTGAAATCCGATGATGCGGAGCATAGGATTGCGGGAATTGACTGGACTTTCAATAGTTGGGGAGGTTTAGAAGATGGATGTTACTGTGATTGGAGTCTCGACAGCCTTGTTAAAAAGAAGATTTTGGATGTTGAGAGGATTCCTAGATTTTCCCATTCTATGGTGCTTGAAGGCGGAAGCATCCATGTAGATGGAGAAGGAACATGTATTACCACCGAAGAGTGTCTATTGAACAAGAACAGGAACCCACATTTGAGTAAGAGCCAAATAGAGGATGAACTTAAGGCATATCTTGGAGTTAGGAAGGTTATATGGTTGCCTCATGGATTATATGGAGATGATGATACAAATGGTCATGTTGATAACATGTGCTGTTTTGTGAGGCCTGGTGTGGTTCTTCTGTCTTGGACTGATGATAAAACTGATCCTCAGTATGAAAGATCTGAAGAAGCATATTCTTTGTTTTCAAGTATAACTGATGCTAATGGTAGAAAATTTGAAGTGATCAAACTCCATGTTCCCGGTCCATTATACATGACTGAGAAAGAGGCTGCTGGGGTTTTTCAGGATGATGGAGCCAAGCCAAGGCTTCCTGGTACTAGACTTGCTGCTTCCTATGTAAACTTTTACATTGCAAATGGTGCTATCATTGCTCCACAATTTGGAGATAAAAAGTGGGATGATGAAGCTATCCGAATTCTGTCTAAGACCTTCCCTCATCATGAAGTTGTGGGAATTGAAGGTTCCAGGGAGATTGTTTTGTCAGGTGGAAATATACATTGCATCACTCAGCAACAACCAGCCATTTAG

Protein sequence

>Msa1260510

MMHLENTPSFHGFHMPAEWEPHSQCWMGWPERADNWRDGAVHAQLVFARVAAAISRFEKVTVCASSAQWENARNQLPDHVRVVEISSNDSWFRDIGPTFVVRRETLKSDDAEHRIAGIDWTFNSWGGLEDGCYCDWSLDSLVKKKILDVERIPRFSHSMVLEGGSIHVDGEGTCITTEECLLNKNRNPHLSKSQIEDELKAYLGVRKVIWLPHGLYGDDDTNGHVDNMCCFVRPGVVLLSWTDDKTDPQYERSEEAYSLFSSITDANGRKFEVIKLHVPGPLYMTEKEAAGVFQDDGAKPRLPGTRLAASYVNFYIANGAIIAPQFGDKKWDDEAIRILSKTFPHHEVVGIEGSREIVLSGGNIHCITQQQPAI*