Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352550 | KEH24531.1 | 97.952 | 293 | 6 | 0 | 1 | 293 | 1 | 293 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352550 | sp|Q3ECP7|ERDL5_ARATH | 63.889 | 288 | 104 | 0 | 9 | 296 | 14 | 301 | 3.58e-123 | 363 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352550 | A0A072U581 | 97.952 | 293 | 6 | 0 | 1 | 293 | 1 | 293 | 0.0 | 572 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026120 | Msa1352550 | 0.803617 | 3.199733e-49 | -8.615850e-47 |
| Msa0053480 | Msa1352550 | 0.825413 | 4.752273e-54 | -8.615850e-47 |
| Msa0055650 | Msa1352550 | 0.845642 | 3.575195e-59 | -8.615850e-47 |
| Msa0070090 | Msa1352550 | 0.801140 | 1.036040e-48 | -8.615850e-47 |
| Msa0077920 | Msa1352550 | 0.828898 | 6.960302e-55 | -8.615850e-47 |
| Msa0117300 | Msa1352550 | 0.801654 | 8.131363e-49 | -8.615850e-47 |
| Msa1346920 | Msa1352550 | 0.802749 | 4.840085e-49 | -8.615850e-47 |
| Msa1352550 | Msa1363560 | 0.806622 | 7.523445e-50 | -8.615850e-47 |
| Msa1352550 | Msa1443440 | 0.804598 | 2.000373e-49 | -8.615850e-47 |
| Msa1352550 | Msa1445250 | 0.819612 | 1.060004e-52 | -8.615850e-47 |
| Msa1352550 | Msa1445700 | 0.815020 | 1.144776e-51 | -8.615850e-47 |
| Msa1352550 | Msa1457070 | 0.822396 | 2.422576e-53 | -8.615850e-47 |
| Msa1352550 | Msa1457450 | 0.802649 | 5.074408e-49 | -8.615850e-47 |
| Msa0641020 | Msa1352550 | 0.807816 | 4.201062e-50 | -8.615850e-47 |
| Msa0641030 | Msa1352550 | 0.831128 | 1.989871e-55 | -8.615850e-47 |
| Msa0645460 | Msa1352550 | 0.814034 | 1.892245e-51 | -8.615850e-47 |
| Msa0648200 | Msa1352550 | 0.802552 | 5.315012e-49 | -8.615850e-47 |
| Msa0664130 | Msa1352550 | 0.804865 | 1.759620e-49 | -8.615850e-47 |
| Msa0679560 | Msa1352550 | 0.819726 | 9.982890e-53 | -8.615850e-47 |
| Msa0684920 | Msa1352550 | 0.802441 | 5.601721e-49 | -8.615850e-47 |
| Msa0685880 | Msa1352550 | 0.807165 | 5.776215e-50 | -8.615850e-47 |
| Msa0756940 | Msa1352550 | 0.818680 | 1.727878e-52 | -8.615850e-47 |
| Msa0836510 | Msa1352550 | 0.819339 | 1.223024e-52 | -8.615850e-47 |
| Msa0125810 | Msa1352550 | 0.822941 | 1.809690e-53 | -8.615850e-47 |
| Msa0160650 | Msa1352550 | 0.806141 | 9.500202e-50 | -8.615850e-47 |
| Msa0166580 | Msa1352550 | 0.802550 | 5.319724e-49 | -8.615850e-47 |
| Msa0184030 | Msa1352550 | 0.802371 | 5.791108e-49 | -8.615850e-47 |
| Msa0225370 | Msa1352550 | 0.837651 | 4.582801e-57 | -8.615850e-47 |
| Msa1260510 | Msa1352550 | 0.811896 | 5.565128e-51 | -8.615850e-47 |
| Msa1296610 | Msa1352550 | 0.822234 | 2.641815e-53 | -8.615850e-47 |
| Msa1298540 | Msa1352550 | 0.804321 | 2.285228e-49 | -8.615850e-47 |
| Msa1300360 | Msa1352550 | 0.813467 | 2.522441e-51 | -8.615850e-47 |
| Msa1328600 | Msa1352550 | 0.809104 | 2.231862e-50 | -8.615850e-47 |
| Msa1331730 | Msa1352550 | 0.830092 | 3.568201e-55 | -8.615850e-47 |
| Msa0378620 | Msa1352550 | 0.804896 | 1.733162e-49 | -8.615850e-47 |
| Msa0406540 | Msa1352550 | 0.815757 | 7.847642e-52 | -8.615850e-47 |
| Msa0421390 | Msa1352550 | 0.801207 | 1.003797e-48 | -8.615850e-47 |
| Msa0445300 | Msa1352550 | 0.808605 | 2.853575e-50 | -8.615850e-47 |
| Msa0452230 | Msa1352550 | 0.808082 | 3.688981e-50 | -8.615850e-47 |
| Msa0984830 | Msa1352550 | 0.804347 | 2.256656e-49 | -8.615850e-47 |
| Msa0985040 | Msa1352550 | 0.813109 | 3.022468e-51 | -8.615850e-47 |
| Msa1036360 | Msa1352550 | 0.821353 | 4.223297e-53 | -8.615850e-47 |
| Msa1038890 | Msa1352550 | 0.904678 | 9.547955e-80 | -8.615850e-47 |
| Msa1076640 | Msa1352550 | 0.825619 | 4.246433e-54 | -8.615850e-47 |
| Msa1081530 | Msa1352550 | 0.813841 | 2.087106e-51 | -8.615850e-47 |
| Msa0265620 | Msa1352550 | 0.803897 | 2.799874e-49 | -8.615850e-47 |
| Msa0266380 | Msa1352550 | 0.836673 | 8.154443e-57 | -8.615850e-47 |
| Msa0270640 | Msa1352550 | 0.802224 | 6.210124e-49 | -8.615850e-47 |
| Msa0279490 | Msa1352550 | 0.811132 | 8.157072e-51 | -8.615850e-47 |
| Msa0341860 | Msa1352550 | 0.832206 | 1.078916e-55 | -8.615850e-47 |
| Msa0343200 | Msa1352550 | 0.821725 | 3.466632e-53 | -8.615850e-47 |
| Msa0360130 | Msa1352550 | 0.804346 | 2.257818e-49 | -8.615850e-47 |
| Msa1113280 | Msa1352550 | 0.819341 | 1.222070e-52 | -8.615850e-47 |
| Msa1128780 | Msa1352550 | 0.904526 | 1.119900e-79 | -8.615850e-47 |
| Msa1166170 | Msa1352550 | 0.807856 | 4.120195e-50 | -8.615850e-47 |
| Msa1166270 | Msa1352550 | 0.814255 | 1.690742e-51 | -8.615850e-47 |
| Msa1172070 | Msa1352550 | 0.826434 | 2.718377e-54 | -8.615850e-47 |
| Msa1213460 | Msa1352550 | 0.813346 | 2.681591e-51 | -8.615850e-47 |
| Msa0544930 | Msa1352550 | 0.839984 | 1.142257e-57 | -8.615850e-47 |
| Msa0575540 | Msa1352550 | 0.841688 | 4.083208e-58 | -8.615850e-47 |
| Msa0883390 | Msa1352550 | 0.810976 | 8.819639e-51 | -8.615850e-47 |
| Msa0883410 | Msa1352550 | 0.810610 | 1.058373e-50 | -8.615850e-47 |
| Msa0885320 | Msa1352550 | 0.817229 | 3.675480e-52 | -8.615850e-47 |
| Msa0912470 | Msa1352550 | 0.815836 | 7.536501e-52 | -8.615850e-47 |
| Msa0930090 | Msa1352550 | 0.834045 | 3.761082e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352550 | MtrunA17_Chr7g0273281 | 74.359 | 273 | 70 | 0 | 22 | 294 | 57 | 329 | 2.50e-150 | 431 |
| Msa1352550 | MtrunA17_Chr7g0273271 | 97.573 | 206 | 5 | 0 | 1 | 206 | 1 | 206 | 4.79e-142 | 399 |
| Msa1352550 | MtrunA17_Chr4g0066581 | 49.310 | 290 | 145 | 1 | 7 | 296 | 34 | 321 | 6.34e-97 | 294 |
| Msa1352550 | MtrunA17_Chr2g0286721 | 50.554 | 271 | 134 | 0 | 26 | 296 | 48 | 318 | 3.12e-93 | 285 |
| Msa1352550 | MtrunA17_Chr7g0259471 | 53.731 | 268 | 124 | 0 | 26 | 293 | 39 | 306 | 1.79e-91 | 280 |
| Msa1352550 | MtrunA17_Chr7g0259221 | 54.717 | 265 | 120 | 0 | 29 | 293 | 44 | 308 | 1.75e-87 | 270 |
| Msa1352550 | MtrunA17_Chr8g0373181 | 46.075 | 293 | 157 | 1 | 5 | 296 | 24 | 316 | 9.93e-85 | 263 |
| Msa1352550 | MtrunA17_Chr1g0155221 | 46.643 | 283 | 146 | 1 | 14 | 296 | 41 | 318 | 8.13e-84 | 260 |
| Msa1352550 | MtrunA17_Chr8g0373191 | 46.296 | 270 | 125 | 2 | 27 | 296 | 39 | 288 | 3.76e-74 | 234 |
| Msa1352550 | MtrunA17_Chr5g0404191 | 46.053 | 228 | 118 | 1 | 15 | 242 | 43 | 265 | 1.84e-67 | 213 |
| Msa1352550 | MtrunA17_Chr7g0250881 | 31.046 | 306 | 191 | 6 | 2 | 296 | 43 | 339 | 3.35e-39 | 144 |
| Msa1352550 | MtrunA17_Chr6g0457781 | 33.065 | 248 | 151 | 4 | 60 | 296 | 136 | 379 | 6.95e-39 | 143 |
| Msa1352550 | MtrunA17_Chr2g0303731 | 30.769 | 273 | 175 | 6 | 37 | 296 | 36 | 307 | 6.24e-31 | 122 |
| Msa1352550 | MtrunA17_Chr6g0486021 | 29.836 | 305 | 198 | 7 | 1 | 294 | 23 | 322 | 1.35e-30 | 120 |
| Msa1352550 | MtrunA17_Chr1g0213631 | 29.954 | 217 | 138 | 4 | 87 | 293 | 48 | 260 | 2.86e-30 | 119 |
| Msa1352550 | MtrunA17_Chr2g0282031 | 29.368 | 269 | 178 | 3 | 38 | 294 | 64 | 332 | 4.97e-30 | 119 |
| Msa1352550 | MtrunA17_Chr7g0273261 | 98.276 | 58 | 1 | 0 | 236 | 293 | 15 | 72 | 1.09e-29 | 113 |
| Msa1352550 | MtrunA17_Chr7g0214451 | 32.420 | 219 | 134 | 4 | 85 | 293 | 94 | 308 | 2.41e-28 | 114 |
| Msa1352550 | MtrunA17_Chr8g0376611 | 30.870 | 230 | 150 | 3 | 76 | 296 | 11 | 240 | 1.49e-27 | 111 |
| Msa1352550 | MtrunA17_Chr1g0213611 | 29.893 | 281 | 179 | 7 | 26 | 293 | 78 | 353 | 1.71e-27 | 112 |
| Msa1352550 | MtrunA17_Chr4g0032021 | 31.071 | 280 | 159 | 9 | 42 | 295 | 119 | 390 | 2.46e-27 | 111 |
| Msa1352550 | MtrunA17_Chr3g0115721 | 28.755 | 233 | 161 | 2 | 67 | 294 | 82 | 314 | 3.26e-27 | 110 |
| Msa1352550 | MtrunA17_Chr4g0021771 | 27.037 | 270 | 185 | 3 | 37 | 294 | 65 | 334 | 3.68e-27 | 110 |
| Msa1352550 | MtrunA17_Chr2g0290181 | 27.083 | 288 | 189 | 5 | 27 | 296 | 27 | 311 | 3.35e-26 | 108 |
| Msa1352550 | MtrunA17_Chr4g0004821 | 29.740 | 269 | 174 | 6 | 38 | 296 | 47 | 310 | 8.02e-26 | 106 |
| Msa1352550 | MtrunA17_Chr6g0485661 | 26.523 | 279 | 182 | 4 | 34 | 294 | 65 | 338 | 8.61e-26 | 106 |
| Msa1352550 | MtrunA17_Chr5g0394341 | 27.852 | 298 | 185 | 6 | 24 | 293 | 19 | 314 | 5.29e-25 | 104 |
| Msa1352550 | MtrunA17_Chr2g0303701 | 29.954 | 217 | 144 | 4 | 87 | 296 | 89 | 304 | 1.54e-24 | 103 |
| Msa1352550 | MtrunA17_Chr4g0039651 | 28.276 | 290 | 183 | 6 | 28 | 293 | 46 | 334 | 1.81e-24 | 102 |
| Msa1352550 | MtrunA17_Chr4g0048411 | 31.193 | 218 | 141 | 3 | 83 | 293 | 99 | 314 | 2.84e-24 | 102 |
| Msa1352550 | MtrunA17_Chr8g0376601 | 29.545 | 220 | 144 | 4 | 87 | 296 | 89 | 307 | 4.43e-24 | 102 |
| Msa1352550 | MtrunA17_Chr8g0376631 | 28.938 | 273 | 180 | 5 | 37 | 296 | 36 | 307 | 7.36e-24 | 101 |
| Msa1352550 | MtrunA17_Chr4g0048051 | 30.275 | 218 | 143 | 3 | 83 | 293 | 99 | 314 | 7.97e-24 | 101 |
| Msa1352550 | MtrunA17_Chr3g0128081 | 28.632 | 234 | 158 | 3 | 67 | 293 | 83 | 314 | 9.86e-24 | 100 |
| Msa1352550 | MtrunA17_Chr3g0119401 | 29.614 | 233 | 151 | 5 | 71 | 294 | 139 | 367 | 1.30e-23 | 100 |
| Msa1352550 | MtrunA17_Chr8g0390141 | 30.802 | 237 | 149 | 5 | 67 | 293 | 86 | 317 | 1.48e-23 | 100 |
| Msa1352550 | MtrunA17_Chr3g0128171 | 28.205 | 234 | 159 | 3 | 67 | 293 | 36 | 267 | 1.48e-23 | 100 |
| Msa1352550 | MtrunA17_Chr3g0078791 | 28.261 | 230 | 156 | 3 | 67 | 289 | 28 | 255 | 1.87e-23 | 99.8 |
| Msa1352550 | MtrunA17_Chr6g0486681 | 30.380 | 237 | 150 | 6 | 67 | 293 | 86 | 317 | 1.93e-23 | 100 |
| Msa1352550 | MtrunA17_Chr6g0486671 | 30.380 | 237 | 150 | 6 | 67 | 293 | 86 | 317 | 1.93e-23 | 100 |
| Msa1352550 | MtrunA17_Chr8g0390261 | 29.536 | 237 | 152 | 5 | 67 | 293 | 86 | 317 | 3.12e-23 | 99.4 |
| Msa1352550 | MtrunA17_Chr3g0085971 | 30.769 | 234 | 153 | 4 | 67 | 293 | 82 | 313 | 5.62e-23 | 98.6 |
| Msa1352550 | MtrunA17_Chr1g0205691 | 30.144 | 209 | 137 | 3 | 92 | 293 | 108 | 314 | 8.83e-23 | 98.2 |
| Msa1352550 | MtrunA17_Chr5g0420841 | 27.797 | 295 | 183 | 5 | 27 | 293 | 21 | 313 | 1.38e-22 | 97.4 |
| Msa1352550 | MtrunA17_Chr3g0144261 | 35.135 | 185 | 112 | 3 | 55 | 232 | 32 | 215 | 1.56e-22 | 97.8 |
| Msa1352550 | MtrunA17_Chr4g0034681 | 26.502 | 283 | 178 | 6 | 38 | 294 | 41 | 319 | 2.33e-22 | 97.1 |
| Msa1352550 | MtrunA17_Chr5g0417611 | 27.350 | 234 | 161 | 3 | 67 | 293 | 84 | 315 | 4.33e-22 | 96.3 |
| Msa1352550 | MtrunA17_Chr5g0432581 | 26.148 | 283 | 181 | 4 | 38 | 294 | 30 | 310 | 5.45e-22 | 95.9 |
| Msa1352550 | MtrunA17_Chr3g0115741 | 26.180 | 233 | 167 | 1 | 67 | 294 | 85 | 317 | 5.86e-22 | 95.9 |
| Msa1352550 | MtrunA17_Chr3g0115751 | 26.724 | 232 | 165 | 2 | 67 | 293 | 87 | 318 | 1.05e-21 | 95.1 |
| Msa1352550 | MtrunA17_Chr1g0164871 | 28.571 | 231 | 152 | 4 | 67 | 289 | 84 | 309 | 1.05e-21 | 95.1 |
| Msa1352550 | MtrunA17_Chr1g0164851 | 28.571 | 231 | 152 | 4 | 67 | 289 | 84 | 309 | 1.14e-21 | 95.1 |
| Msa1352550 | MtrunA17_Chr8g0373531 | 26.855 | 283 | 183 | 4 | 38 | 296 | 30 | 312 | 1.19e-21 | 94.7 |
| Msa1352550 | MtrunA17_Chr3g0115781 | 25.322 | 233 | 169 | 1 | 67 | 294 | 84 | 316 | 3.20e-21 | 93.6 |
| Msa1352550 | MtrunA17_Chr1g0205671 | 26.180 | 233 | 163 | 3 | 68 | 293 | 84 | 314 | 3.97e-21 | 93.2 |
| Msa1352550 | MtrunA17_Chr5g0403831 | 26.923 | 286 | 186 | 3 | 32 | 294 | 36 | 321 | 8.91e-21 | 92.4 |
| Msa1352550 | MtrunA17_Chr4g0036021 | 23.741 | 278 | 191 | 3 | 38 | 294 | 38 | 315 | 1.08e-20 | 92.0 |
| Msa1352550 | MtrunA17_Chr4g0065311 | 25.926 | 297 | 183 | 7 | 27 | 293 | 21 | 310 | 2.26e-20 | 90.9 |
| Msa1352550 | MtrunA17_Chr4g0065324 | 26.383 | 235 | 161 | 3 | 67 | 293 | 88 | 318 | 2.57e-20 | 90.9 |
| Msa1352550 | MtrunA17_Chr8g0390521 | 22.697 | 304 | 207 | 7 | 13 | 294 | 3 | 300 | 4.84e-20 | 90.1 |
| Msa1352550 | MtrunA17_Chr1g0205681 | 25.424 | 236 | 167 | 3 | 65 | 293 | 82 | 315 | 5.93e-20 | 89.7 |
| Msa1352550 | MtrunA17_Chr3g0144361 | 22.785 | 316 | 214 | 6 | 4 | 294 | 9 | 319 | 8.24e-20 | 89.4 |
| Msa1352550 | MtrunA17_Chr5g0445601 | 25.751 | 233 | 161 | 3 | 69 | 293 | 88 | 316 | 2.29e-19 | 88.2 |
| Msa1352550 | MtrunA17_Chr3g0115711 | 23.707 | 232 | 171 | 2 | 67 | 293 | 82 | 312 | 3.14e-19 | 87.8 |
| Msa1352550 | MtrunA17_Chr5g0437021 | 28.511 | 235 | 155 | 5 | 67 | 293 | 84 | 313 | 3.86e-19 | 87.4 |
| Msa1352550 | MtrunA17_Chr2g0290161 | 26.432 | 227 | 133 | 5 | 85 | 301 | 21 | 223 | 1.64e-18 | 85.5 |
| Msa1352550 | MtrunA17_Chr7g0257631 | 26.068 | 234 | 159 | 4 | 69 | 293 | 122 | 350 | 2.46e-18 | 85.1 |
| Msa1352550 | MtrunA17_Chr5g0419321 | 30.814 | 172 | 111 | 3 | 68 | 232 | 75 | 245 | 2.79e-18 | 85.1 |
| Msa1352550 | MtrunA17_Chr5g0407441 | 28.241 | 216 | 143 | 5 | 27 | 232 | 4 | 217 | 3.54e-18 | 85.1 |
| Msa1352550 | MtrunA17_Chr3g0078971 | 24.080 | 299 | 197 | 7 | 24 | 294 | 20 | 316 | 1.57e-17 | 82.8 |
| Msa1352550 | MtrunA17_Chr3g0146061 | 37.267 | 161 | 86 | 3 | 75 | 224 | 54 | 210 | 4.74e-17 | 81.6 |
| Msa1352550 | MtrunA17_Chr5g0434231 | 29.268 | 164 | 96 | 2 | 71 | 233 | 9 | 153 | 1.30e-15 | 72.8 |
| Msa1352550 | MtrunA17_Chr3g0115731 | 27.731 | 119 | 86 | 0 | 176 | 294 | 175 | 293 | 3.38e-14 | 72.8 |
| Msa1352550 | MtrunA17_Chr3g0078991 | 24.415 | 299 | 197 | 7 | 24 | 294 | 20 | 317 | 1.27e-13 | 71.2 |
| Msa1352550 | MtrunA17_Chr8g0370141 | 26.341 | 205 | 127 | 5 | 64 | 244 | 40 | 244 | 2.90e-12 | 66.6 |
| Msa1352550 | MtrunA17_Chr5g0446681 | 33.621 | 116 | 77 | 0 | 51 | 166 | 30 | 145 | 2.97e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352550 | AT1G54730.11 | 63.889 | 288 | 104 | 0 | 9 | 296 | 14 | 301 | 1.50e-126 | 365 |
| Msa1352550 | AT1G54730.10 | 63.889 | 288 | 104 | 0 | 9 | 296 | 14 | 301 | 3.50e-126 | 363 |
| Msa1352550 | AT1G54730.6 | 63.889 | 288 | 104 | 0 | 9 | 296 | 14 | 301 | 3.50e-126 | 363 |
| Msa1352550 | AT1G54730.8 | 63.889 | 288 | 104 | 0 | 9 | 296 | 14 | 301 | 1.69e-125 | 364 |
| Msa1352550 | AT1G54730.9 | 63.889 | 288 | 104 | 0 | 9 | 296 | 14 | 301 | 3.08e-125 | 364 |
| Msa1352550 | AT1G54730.7 | 63.889 | 288 | 104 | 0 | 9 | 296 | 14 | 301 | 3.08e-125 | 364 |
| Msa1352550 | AT1G54730.4 | 63.889 | 288 | 104 | 0 | 9 | 296 | 14 | 301 | 8.04e-125 | 363 |
| Msa1352550 | AT1G54730.3 | 63.889 | 288 | 104 | 0 | 9 | 296 | 14 | 301 | 1.12e-124 | 363 |
| Msa1352550 | AT1G54730.5 | 63.889 | 288 | 104 | 0 | 9 | 296 | 14 | 301 | 2.33e-124 | 363 |
| Msa1352550 | AT1G54730.2 | 63.889 | 288 | 104 | 0 | 9 | 296 | 14 | 301 | 3.64e-124 | 363 |
| Msa1352550 | AT2G48020.3 | 53.357 | 283 | 130 | 1 | 16 | 296 | 15 | 297 | 3.21e-102 | 303 |
| Msa1352550 | AT2G48020.4 | 53.357 | 283 | 130 | 1 | 16 | 296 | 15 | 297 | 4.07e-102 | 304 |
| Msa1352550 | AT2G48020.2 | 52.027 | 296 | 140 | 1 | 3 | 296 | 2 | 297 | 1.01e-100 | 303 |
| Msa1352550 | AT2G48020.1 | 52.027 | 296 | 140 | 1 | 3 | 296 | 2 | 297 | 1.01e-100 | 303 |
| Msa1352550 | AT1G08930.1 | 52.222 | 270 | 129 | 0 | 24 | 293 | 55 | 324 | 5.00e-94 | 287 |
| Msa1352550 | AT1G08930.2 | 52.222 | 270 | 129 | 0 | 24 | 293 | 55 | 324 | 5.00e-94 | 287 |
| Msa1352550 | AT5G18840.1 | 49.110 | 281 | 143 | 0 | 16 | 296 | 33 | 313 | 8.45e-90 | 276 |
| Msa1352550 | AT1G08920.3 | 49.259 | 270 | 137 | 0 | 24 | 293 | 29 | 298 | 3.07e-89 | 273 |
| Msa1352550 | AT3G05400.1 | 49.281 | 278 | 141 | 0 | 16 | 293 | 15 | 292 | 3.53e-89 | 274 |
| Msa1352550 | AT1G08920.1 | 49.259 | 270 | 137 | 0 | 24 | 293 | 29 | 298 | 5.02e-89 | 273 |
| Msa1352550 | AT1G08920.2 | 49.259 | 270 | 137 | 0 | 24 | 293 | 29 | 298 | 6.94e-89 | 273 |
| Msa1352550 | AT3G20460.1 | 49.819 | 277 | 138 | 1 | 17 | 293 | 44 | 319 | 2.49e-87 | 270 |
| Msa1352550 | AT3G05165.4 | 45.583 | 283 | 154 | 0 | 11 | 293 | 14 | 296 | 7.53e-87 | 268 |
| Msa1352550 | AT3G05165.5 | 45.583 | 283 | 154 | 0 | 11 | 293 | 14 | 296 | 7.53e-87 | 268 |
| Msa1352550 | AT3G05165.6 | 45.583 | 283 | 154 | 0 | 11 | 293 | 14 | 296 | 1.90e-86 | 268 |
| Msa1352550 | AT5G27360.4 | 45.745 | 282 | 153 | 0 | 12 | 293 | 20 | 301 | 2.09e-86 | 266 |
| Msa1352550 | AT3G05165.3 | 45.583 | 283 | 154 | 0 | 11 | 293 | 14 | 296 | 2.21e-86 | 266 |
| Msa1352550 | AT3G05165.2 | 45.583 | 283 | 154 | 0 | 11 | 293 | 14 | 296 | 2.21e-86 | 266 |
| Msa1352550 | AT3G05165.1 | 45.583 | 283 | 154 | 0 | 11 | 293 | 14 | 296 | 2.21e-86 | 266 |
| Msa1352550 | AT3G05155.2 | 47.312 | 279 | 144 | 1 | 15 | 293 | 15 | 290 | 8.19e-86 | 261 |
| Msa1352550 | AT5G27360.1 | 45.745 | 282 | 153 | 0 | 12 | 293 | 20 | 301 | 9.08e-86 | 265 |
| Msa1352550 | AT5G27360.3 | 45.745 | 282 | 153 | 0 | 12 | 293 | 68 | 349 | 2.77e-85 | 266 |
| Msa1352550 | AT3G05160.1 | 46.667 | 270 | 144 | 0 | 24 | 293 | 18 | 287 | 5.28e-85 | 263 |
| Msa1352550 | AT5G27350.1 | 46.099 | 282 | 152 | 0 | 12 | 293 | 16 | 297 | 1.30e-84 | 262 |
| Msa1352550 | AT1G08900.4 | 49.474 | 285 | 143 | 1 | 9 | 293 | 8 | 291 | 3.47e-84 | 260 |
| Msa1352550 | AT3G05155.1 | 47.312 | 279 | 144 | 1 | 15 | 293 | 15 | 290 | 6.34e-84 | 260 |
| Msa1352550 | AT1G08900.1 | 49.474 | 285 | 143 | 1 | 9 | 293 | 8 | 291 | 8.26e-84 | 260 |
| Msa1352550 | AT1G08900.2 | 49.474 | 285 | 143 | 1 | 9 | 293 | 8 | 291 | 8.26e-84 | 260 |
| Msa1352550 | AT1G75220.1 | 46.454 | 282 | 146 | 1 | 15 | 296 | 41 | 317 | 8.49e-83 | 258 |
| Msa1352550 | AT1G19450.1 | 46.454 | 282 | 146 | 1 | 15 | 296 | 42 | 318 | 2.55e-82 | 257 |
| Msa1352550 | AT1G08890.1 | 49.643 | 280 | 139 | 1 | 16 | 293 | 14 | 293 | 2.84e-81 | 253 |
| Msa1352550 | AT3G05150.1 | 46.263 | 281 | 147 | 1 | 13 | 293 | 25 | 301 | 1.01e-79 | 249 |
| Msa1352550 | AT3G05150.3 | 46.263 | 281 | 147 | 1 | 13 | 293 | 25 | 301 | 1.01e-79 | 249 |
| Msa1352550 | AT3G05150.2 | 46.263 | 281 | 147 | 1 | 13 | 293 | 25 | 301 | 1.68e-79 | 249 |
| Msa1352550 | AT4G04760.1 | 46.739 | 276 | 144 | 1 | 24 | 296 | 28 | 303 | 1.28e-78 | 247 |
| Msa1352550 | AT4G04760.2 | 46.739 | 276 | 144 | 1 | 24 | 296 | 28 | 303 | 1.38e-78 | 247 |
| Msa1352550 | AT3G05400.2 | 46.043 | 278 | 130 | 1 | 16 | 293 | 15 | 272 | 7.42e-78 | 244 |
| Msa1352550 | AT3G05160.3 | 47.257 | 237 | 125 | 0 | 57 | 293 | 2 | 238 | 4.05e-76 | 238 |
| Msa1352550 | AT3G05160.2 | 47.257 | 237 | 125 | 0 | 57 | 293 | 2 | 238 | 4.05e-76 | 238 |
| Msa1352550 | AT1G08900.3 | 47.368 | 285 | 141 | 2 | 9 | 293 | 8 | 283 | 4.96e-76 | 239 |
| Msa1352550 | AT4G04750.1 | 45.105 | 286 | 155 | 1 | 13 | 296 | 22 | 307 | 4.58e-75 | 238 |
| Msa1352550 | AT4G04750.2 | 45.105 | 286 | 155 | 1 | 13 | 296 | 22 | 307 | 4.58e-75 | 238 |
| Msa1352550 | AT1G08900.5 | 49.398 | 249 | 126 | 0 | 45 | 293 | 1 | 249 | 8.54e-75 | 235 |
| Msa1352550 | AT4G04750.3 | 45.105 | 286 | 155 | 1 | 13 | 296 | 66 | 351 | 1.03e-74 | 238 |
| Msa1352550 | AT4G04760.3 | 48.760 | 242 | 121 | 1 | 58 | 296 | 3 | 244 | 4.94e-71 | 226 |
| Msa1352550 | AT5G27360.2 | 47.208 | 197 | 104 | 0 | 97 | 293 | 1 | 197 | 4.86e-61 | 199 |
| Msa1352550 | AT5G27360.5 | 47.208 | 197 | 104 | 0 | 97 | 293 | 1 | 197 | 4.86e-61 | 199 |
| Msa1352550 | AT5G16150.2 | 35.484 | 248 | 141 | 6 | 60 | 294 | 136 | 377 | 8.54e-40 | 146 |
| Msa1352550 | AT5G16150.1 | 35.484 | 248 | 141 | 6 | 60 | 294 | 136 | 377 | 8.54e-40 | 146 |
| Msa1352550 | AT5G16150.3 | 35.484 | 248 | 141 | 6 | 60 | 294 | 136 | 377 | 8.54e-40 | 146 |
| Msa1352550 | AT1G05030.1 | 29.437 | 231 | 157 | 2 | 71 | 296 | 125 | 354 | 2.99e-29 | 117 |
| Msa1352550 | AT1G05030.2 | 29.437 | 231 | 157 | 2 | 71 | 296 | 73 | 302 | 3.92e-29 | 116 |
| Msa1352550 | AT1G67300.4 | 30.545 | 275 | 174 | 6 | 32 | 294 | 56 | 325 | 3.93e-27 | 110 |
| Msa1352550 | AT1G67300.5 | 30.545 | 275 | 174 | 6 | 32 | 294 | 56 | 325 | 3.93e-27 | 110 |
| Msa1352550 | AT2G43330.1 | 30.584 | 291 | 182 | 8 | 26 | 302 | 31 | 315 | 4.34e-27 | 110 |
| Msa1352550 | AT1G67300.2 | 30.545 | 275 | 174 | 6 | 32 | 294 | 56 | 325 | 5.13e-27 | 110 |
| Msa1352550 | AT1G67300.1 | 30.545 | 275 | 174 | 6 | 32 | 294 | 56 | 325 | 5.30e-27 | 110 |
| Msa1352550 | AT1G67300.3 | 30.545 | 275 | 174 | 6 | 32 | 294 | 56 | 325 | 5.30e-27 | 110 |
| Msa1352550 | AT1G67300.6 | 30.545 | 275 | 174 | 6 | 32 | 294 | 56 | 325 | 5.32e-27 | 110 |
| Msa1352550 | AT1G67300.7 | 30.545 | 275 | 174 | 6 | 32 | 294 | 56 | 325 | 5.32e-27 | 110 |
| Msa1352550 | AT2G20780.1 | 28.464 | 267 | 181 | 2 | 38 | 294 | 66 | 332 | 1.50e-26 | 109 |
| Msa1352550 | AT5G59250.1 | 30.960 | 323 | 184 | 10 | 4 | 293 | 74 | 390 | 1.62e-26 | 109 |
| Msa1352550 | AT1G30220.1 | 30.734 | 218 | 140 | 4 | 89 | 296 | 93 | 309 | 2.08e-26 | 109 |
| Msa1352550 | AT2G35740.1 | 29.412 | 238 | 150 | 4 | 71 | 293 | 73 | 307 | 2.12e-26 | 109 |
| Msa1352550 | AT2G20780.2 | 29.644 | 253 | 164 | 4 | 55 | 294 | 23 | 274 | 6.64e-26 | 107 |
| Msa1352550 | AT1G11260.1 | 27.000 | 300 | 190 | 5 | 24 | 296 | 20 | 317 | 8.52e-26 | 107 |
| Msa1352550 | AT2G18480.1 | 26.882 | 279 | 181 | 2 | 41 | 296 | 36 | 314 | 7.29e-25 | 104 |
| Msa1352550 | AT1G79820.2 | 30.597 | 268 | 169 | 6 | 38 | 294 | 65 | 326 | 9.37e-24 | 101 |
| Msa1352550 | AT1G79820.1 | 30.597 | 268 | 169 | 6 | 38 | 294 | 65 | 326 | 9.37e-24 | 101 |
| Msa1352550 | AT4G16480.2 | 26.132 | 287 | 193 | 4 | 24 | 293 | 24 | 308 | 1.00e-23 | 101 |
| Msa1352550 | AT4G16480.3 | 26.132 | 287 | 193 | 4 | 24 | 293 | 24 | 308 | 1.00e-23 | 101 |
| Msa1352550 | AT4G16480.1 | 26.132 | 287 | 193 | 4 | 24 | 293 | 24 | 308 | 1.00e-23 | 101 |
| Msa1352550 | AT1G79820.4 | 30.597 | 268 | 169 | 6 | 38 | 294 | 65 | 326 | 1.07e-23 | 100 |
| Msa1352550 | AT3G03090.1 | 30.142 | 282 | 170 | 8 | 37 | 293 | 57 | 336 | 2.12e-23 | 100 |
| Msa1352550 | AT4G21480.1 | 29.741 | 232 | 156 | 3 | 67 | 293 | 83 | 312 | 3.51e-23 | 99.8 |
| Msa1352550 | AT1G77210.2 | 29.060 | 234 | 157 | 4 | 67 | 293 | 86 | 317 | 5.61e-23 | 99.0 |
| Msa1352550 | AT1G77210.1 | 29.060 | 234 | 157 | 4 | 67 | 293 | 86 | 317 | 5.61e-23 | 99.0 |
| Msa1352550 | AT3G19930.1 | 27.542 | 236 | 158 | 4 | 67 | 293 | 82 | 313 | 1.92e-22 | 97.4 |
| Msa1352550 | AT3G19930.2 | 27.542 | 236 | 158 | 4 | 67 | 293 | 82 | 313 | 1.92e-22 | 97.4 |
| Msa1352550 | AT5G17010.1 | 29.412 | 272 | 165 | 8 | 43 | 293 | 71 | 336 | 2.84e-22 | 97.1 |
| Msa1352550 | AT5G17010.3 | 29.412 | 272 | 165 | 8 | 43 | 293 | 71 | 336 | 2.84e-22 | 97.1 |
| Msa1352550 | AT5G17010.4 | 29.412 | 272 | 165 | 8 | 43 | 293 | 71 | 336 | 2.84e-22 | 97.1 |
| Msa1352550 | AT5G26340.1 | 27.483 | 302 | 181 | 7 | 24 | 293 | 20 | 315 | 3.07e-22 | 97.1 |
| Msa1352550 | AT5G26250.1 | 28.755 | 233 | 158 | 3 | 67 | 293 | 81 | 311 | 4.27e-22 | 96.7 |
| Msa1352550 | AT1G50310.1 | 27.660 | 235 | 159 | 4 | 67 | 293 | 85 | 316 | 4.67e-22 | 96.7 |
| Msa1352550 | AT2G16120.1 | 25.357 | 280 | 186 | 4 | 38 | 294 | 37 | 316 | 5.23e-22 | 96.3 |
| Msa1352550 | AT3G05960.1 | 30.213 | 235 | 152 | 5 | 67 | 293 | 80 | 310 | 5.31e-22 | 96.3 |
| Msa1352550 | AT4G36670.1 | 26.056 | 284 | 183 | 5 | 38 | 296 | 28 | 309 | 1.03e-21 | 95.5 |
| Msa1352550 | AT1G20840.2 | 29.437 | 231 | 155 | 3 | 29 | 252 | 6 | 235 | 2.18e-21 | 94.7 |
| Msa1352550 | AT1G20840.1 | 29.437 | 231 | 155 | 3 | 29 | 252 | 6 | 235 | 2.18e-21 | 94.7 |
| Msa1352550 | AT5G23270.1 | 27.350 | 234 | 161 | 4 | 67 | 293 | 85 | 316 | 4.84e-21 | 93.6 |
| Msa1352550 | AT2G16130.1 | 24.643 | 280 | 188 | 3 | 38 | 294 | 37 | 316 | 5.22e-21 | 93.6 |
| Msa1352550 | AT3G19940.1 | 25.751 | 233 | 165 | 3 | 67 | 293 | 85 | 315 | 1.25e-20 | 92.4 |
| Msa1352550 | AT1G54730.1 | 66.129 | 62 | 21 | 0 | 78 | 139 | 1 | 62 | 2.60e-20 | 83.2 |
| Msa1352550 | AT3G18830.1 | 25.694 | 288 | 183 | 6 | 38 | 298 | 47 | 330 | 3.09e-20 | 91.3 |
| Msa1352550 | AT1G34580.1 | 28.175 | 252 | 164 | 4 | 69 | 304 | 85 | 335 | 3.42e-19 | 88.2 |
| Msa1352550 | AT3G51490.3 | 34.545 | 165 | 100 | 3 | 75 | 232 | 4 | 167 | 3.64e-19 | 88.2 |
| Msa1352550 | AT1G34580.2 | 28.175 | 252 | 164 | 4 | 69 | 304 | 35 | 285 | 3.78e-19 | 87.8 |
| Msa1352550 | AT3G51490.2 | 34.545 | 165 | 100 | 3 | 75 | 232 | 54 | 217 | 4.44e-19 | 88.2 |
| Msa1352550 | AT3G51490.1 | 34.545 | 165 | 100 | 3 | 75 | 232 | 54 | 217 | 4.85e-19 | 87.8 |
| Msa1352550 | AT4G02050.2 | 24.590 | 305 | 197 | 5 | 17 | 293 | 17 | 316 | 5.57e-19 | 87.4 |
| Msa1352550 | AT4G02050.1 | 24.590 | 305 | 197 | 5 | 17 | 293 | 17 | 316 | 5.57e-19 | 87.4 |
| Msa1352550 | AT5G61520.2 | 27.119 | 236 | 154 | 7 | 69 | 293 | 43 | 271 | 1.59e-18 | 85.9 |
| Msa1352550 | AT5G61520.1 | 27.155 | 232 | 159 | 5 | 69 | 293 | 91 | 319 | 1.77e-18 | 85.9 |
| Msa1352550 | AT1G07340.1 | 26.282 | 312 | 192 | 7 | 14 | 293 | 7 | 312 | 2.61e-18 | 85.5 |
| Msa1352550 | AT4G35300.4 | 36.364 | 165 | 97 | 4 | 75 | 232 | 54 | 217 | 4.24e-18 | 85.1 |
| Msa1352550 | AT4G35300.8 | 36.364 | 165 | 97 | 4 | 75 | 232 | 54 | 217 | 4.24e-18 | 85.1 |
| Msa1352550 | AT4G35300.6 | 36.364 | 165 | 97 | 4 | 75 | 232 | 54 | 217 | 4.24e-18 | 85.1 |
| Msa1352550 | AT4G35300.11 | 36.364 | 165 | 97 | 4 | 75 | 232 | 54 | 217 | 4.24e-18 | 85.1 |
| Msa1352550 | AT4G35300.1 | 36.364 | 165 | 97 | 4 | 75 | 232 | 54 | 217 | 4.24e-18 | 85.1 |
| Msa1352550 | AT4G35300.10 | 36.364 | 165 | 97 | 4 | 75 | 232 | 54 | 217 | 4.24e-18 | 85.1 |
| Msa1352550 | AT4G35300.7 | 36.364 | 165 | 97 | 4 | 75 | 232 | 54 | 217 | 4.24e-18 | 85.1 |
| Msa1352550 | AT4G35300.9 | 35.758 | 165 | 98 | 3 | 75 | 232 | 54 | 217 | 4.54e-18 | 85.1 |
| Msa1352550 | AT4G35300.2 | 35.758 | 165 | 98 | 3 | 75 | 232 | 54 | 217 | 4.54e-18 | 85.1 |
| Msa1352550 | AT4G35300.3 | 35.758 | 165 | 98 | 3 | 75 | 232 | 54 | 217 | 4.54e-18 | 85.1 |
| Msa1352550 | AT1G79820.3 | 32.821 | 195 | 122 | 4 | 38 | 224 | 65 | 258 | 1.69e-17 | 82.8 |
| Msa1352550 | AT5G17010.2 | 29.167 | 216 | 137 | 5 | 76 | 275 | 104 | 319 | 2.03e-17 | 82.4 |
| Msa1352550 | AT1G77210.3 | 30.675 | 163 | 104 | 4 | 138 | 293 | 8 | 168 | 1.47e-16 | 79.3 |
| Msa1352550 | AT1G50310.2 | 26.380 | 163 | 109 | 4 | 139 | 293 | 14 | 173 | 2.05e-13 | 70.5 |
| Msa1352550 | AT1G79820.5 | 31.304 | 115 | 64 | 2 | 120 | 224 | 87 | 196 | 9.53e-11 | 62.4 |
Find 80 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAGATACACAGATGCTTTA+AGG | 0.115007 | tig0012617:+2749 | None:intergenic |
| GTATCACTAACTTATCTTAT+TGG | 0.226585 | tig0012617:-1157 | Msa1352550:CDS |
| GTTATTTCAGCTATATAAAT+TGG | 0.231757 | tig0012617:+1393 | None:intergenic |
| TGACAGCTAATGATTTGTTT+TGG | 0.245772 | tig0012617:-1181 | Msa1352550:intron |
| ATTCTTCAATTGGAGGCTTT+TGG | 0.312549 | tig0012617:-1131 | Msa1352550:CDS |
| TATGTTGGAAGACTATTGTT+AGG | 0.345071 | tig0012617:-1546 | Msa1352550:CDS |
| TTGCAAGTATATTATGTGTT+TGG | 0.345256 | tig0012617:-3062 | Msa1352550:five_prime_UTR |
| TCCGAGCTATGTTGCATCTT+GGG | 0.361851 | tig0012617:-1809 | Msa1352550:CDS |
| CTCCGAGCTATGTTGCATCT+TGG | 0.368885 | tig0012617:-1810 | Msa1352550:CDS |
| ACCACCCTTGCTGCTGTCTC+TGG | 0.374172 | tig0012617:-2606 | Msa1352550:CDS |
| TTTGGTTCAATACTAACAAT+TGG | 0.384921 | tig0012617:-1996 | Msa1352550:CDS |
| CCTAGGAGACTCGGGAATAA+AGG | 0.388063 | tig0012617:+977 | None:intergenic |
| AATCCACTTTACAGCACCTT+AGG | 0.388303 | tig0012617:-622 | Msa1352550:CDS |
| TATTCATCCCCTGCTCAATC+TGG | 0.389787 | tig0012617:-2450 | Msa1352550:CDS |
| TTATTGGAGCATTCTTCAAT+TGG | 0.391490 | tig0012617:-1141 | Msa1352550:CDS |
| TGCAAGTATATTATGTGTTT+GGG | 0.392967 | tig0012617:-3061 | Msa1352550:five_prime_UTR |
| GAAAATGAAGTGAAATGAAA+AGG | 0.399432 | tig0012617:+2816 | None:intergenic |
| AAATGAGTGTATATGATTGC+GGG | 0.408976 | tig0012617:+2859 | None:intergenic |
| GCAGGCAAAGGTTGGTCGCT+TGG | 0.414342 | tig0012617:-654 | Msa1352550:intron |
| GAGATTCACTGCAGTTCATC+AGG | 0.433725 | tig0012617:-1352 | Msa1352550:intron |
| GAATCTCCCTCGAAGATCCT+TGG | 0.434230 | tig0012617:+1368 | None:intergenic |
| TTGGAGCATTCTTCAATTGG+AGG | 0.438236 | tig0012617:-1138 | Msa1352550:CDS |
| GCTTTAAGGTTATGAAGAGT+AGG | 0.438635 | tig0012617:+2763 | None:intergenic |
| ATCACAGATGACCTTGATCT+TGG | 0.439414 | tig0012617:-2426 | Msa1352550:CDS |
| CCTTTATTCCCGAGTCTCCT+AGG | 0.455469 | tig0012617:-977 | Msa1352550:CDS |
| AATCTCCCTCGAAGATCCTT+GGG | 0.474385 | tig0012617:+1369 | None:intergenic |
| AAAATGAAGTGAAATGAAAA+GGG | 0.477551 | tig0012617:+2817 | None:intergenic |
| CATTCGCGAAGAAGCTAGTT+CGG | 0.477966 | tig0012617:-2652 | Msa1352550:CDS |
| ATTAGTGAAGACGCCAGCTT+GGG | 0.478480 | tig0012617:-3001 | Msa1352550:five_prime_UTR |
| TAATCTGAAACGATTGGCAT+TGG | 0.480734 | tig0012617:+2915 | None:intergenic |
| ATCCACTTTACAGCACCTTA+GGG | 0.481918 | tig0012617:-621 | Msa1352550:CDS |
| TCCCGAGTCTCCTAGGTGGC+TGG | 0.483351 | tig0012617:-970 | Msa1352550:intron |
| TCCCCTAAGGTGCTGTAAAG+TGG | 0.493199 | tig0012617:+619 | None:intergenic |
| CACCAGCCACCTAGGAGACT+CGG | 0.501397 | tig0012617:+968 | None:intergenic |
| AAAATGAGTGTATATGATTG+CGG | 0.511891 | tig0012617:+2858 | None:intergenic |
| AGCTATGTTGCATCTTGGGA+TGG | 0.514867 | tig0012617:-1805 | Msa1352550:CDS |
| TTTGTTTGAAGGTTGCTTGG+TGG | 0.518629 | tig0012617:-1572 | Msa1352550:intron |
| GAATGTTGATATTTCTGAAG+AGG | 0.522673 | tig0012617:-594 | Msa1352550:CDS |
| TATCAACATTCTTTCCCCTA+AGG | 0.526789 | tig0012617:+606 | None:intergenic |
| CCTCGGCTACGCCAAGATCA+AGG | 0.526814 | tig0012617:+2415 | None:intergenic |
| CTATTGTTAGGATGTGGAAT+GGG | 0.527075 | tig0012617:-1534 | Msa1352550:CDS |
| GTTGCTTGGTGGCTTTATGT+TGG | 0.534213 | tig0012617:-1561 | Msa1352550:CDS |
| AATTTGATGTTATAGGCCAT+GGG | 0.537100 | tig0012617:-1836 | Msa1352550:intron |
| CTCAGAAGCTGTGCAAGACA+TGG | 0.541760 | tig0012617:+1005 | None:intergenic |
| CAAAGGTTGGTCGCTTGGAA+AGG | 0.543452 | tig0012617:-649 | Msa1352550:CDS |
| AACGTTAAGAGCTCCCAAGC+TGG | 0.545488 | tig0012617:+2988 | None:intergenic |
| ATTGTTCTGCAGGCAAAGGT+TGG | 0.546143 | tig0012617:-662 | Msa1352550:intron |
| TCCCAAGATGCAACATAGCT+CGG | 0.546662 | tig0012617:+1808 | None:intergenic |
| CGAACTAGCTTCTTCGCGAA+TGG | 0.550047 | tig0012617:+2653 | None:intergenic |
| GATTAGTGAAGACGCCAGCT+TGG | 0.550708 | tig0012617:-3002 | Msa1352550:five_prime_UTR |
| ACCAGAGACAGCAGCAAGGG+TGG | 0.550981 | tig0012617:+2605 | None:intergenic |
| ACTATTGTTAGGATGTGGAA+TGG | 0.552813 | tig0012617:-1535 | Msa1352550:CDS |
| AGAACCAGAGACAGCAGCAA+GGG | 0.561286 | tig0012617:+2602 | None:intergenic |
| TCTGTGATTCCAGATTGAGC+AGG | 0.562147 | tig0012617:+2441 | None:intergenic |
| TGCTAAACTACCACTTACAA+TGG | 0.563786 | tig0012617:+1959 | None:intergenic |
| CCTTGATCTTGGCGTAGCCG+AGG | 0.564032 | tig0012617:-2415 | Msa1352550:intron |
| AATACTAACAATTGGAGCGA+TGG | 0.564654 | tig0012617:-1988 | Msa1352550:CDS |
| CTAACAATTGGAGCGATGGT+TGG | 0.566895 | tig0012617:-1984 | Msa1352550:CDS |
| GCTTGCCATTGCAGTCTCAA+AGG | 0.575081 | tig0012617:-1783 | Msa1352550:intron |
| GGTAGTTTAGCAGATTATGC+AGG | 0.575653 | tig0012617:-1948 | Msa1352550:CDS |
| ATTACATACTCTAATTTCAG+TGG | 0.575662 | tig0012617:+571 | None:intergenic |
| GGAAGACTATTGTTAGGATG+TGG | 0.575864 | tig0012617:-1540 | Msa1352550:CDS |
| CTGTGATTCCAGATTGAGCA+GGG | 0.578238 | tig0012617:+2442 | None:intergenic |
| AGCTTCTGTTTGCTGCTGAG+AGG | 0.578800 | tig0012617:+439 | None:intergenic |
| ACCAGCCACCTAGGAGACTC+GGG | 0.581675 | tig0012617:+969 | None:intergenic |
| AATGGGTATTCTATCATATG+TGG | 0.590029 | tig0012617:-1517 | Msa1352550:intron |
| ATAACACCCAAGGATCTTCG+AGG | 0.605899 | tig0012617:-1375 | Msa1352550:CDS |
| ATGGTTGGTGCCATTGTAAG+TGG | 0.607976 | tig0012617:-1969 | Msa1352550:CDS |
| GTAAGTATAAGAATACTAGT+TGG | 0.617323 | tig0012617:+2627 | None:intergenic |
| GAACAACTCACCAGCCACCT+AGG | 0.622122 | tig0012617:+960 | None:intergenic |
| TATAGCTGAAATAACACCCA+AGG | 0.637527 | tig0012617:-1385 | Msa1352550:CDS |
| ACATAGCTCGGAGAATCCCA+TGG | 0.638278 | tig0012617:+1820 | None:intergenic |
| ATTATGTAATCTGAAACGAT+TGG | 0.639796 | tig0012617:+2909 | None:intergenic |
| AGTTACCTTTGAGACTGCAA+TGG | 0.641960 | tig0012617:+1778 | None:intergenic |
| AAGAACCAGAGACAGCAGCA+AGG | 0.646758 | tig0012617:+2601 | None:intergenic |
| TCCACTTTACAGCACCTTAG+GGG | 0.658562 | tig0012617:-620 | Msa1352550:CDS |
| TAACACCCAAGGATCTTCGA+GGG | 0.664630 | tig0012617:-1374 | Msa1352550:CDS |
| GTGATAATAAAATACAAACA+TGG | 0.673802 | tig0012617:-3031 | Msa1352550:five_prime_UTR |
| TTATTCCCGAGTCTCCTAGG+TGG | 0.689625 | tig0012617:-974 | Msa1352550:CDS |
| TGTGATTCCAGATTGAGCAG+GGG | 0.720230 | tig0012617:+2443 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTTATTAAATATGGAAA+TGG | + | tig0012617:1344-1363 | None:intergenic | 10.0% |
| !! | AACTTATTTATTGATATTGT+TGG | - | tig0012617:727-746 | Msa1352550:intron | 15.0% |
| !! | GTACTCAAATTTATTAAATA+TGG | + | tig0012617:1350-1369 | None:intergenic | 15.0% |
| !! | TTAATAAATTTGAGTACATT+AGG | - | tig0012617:1353-1372 | Msa1352550:CDS | 15.0% |
| !! | AATTGCGTTAAATATTATAA+AGG | - | tig0012617:1761-1780 | Msa1352550:intron | 15.0% |
| !! | ATTGCGTTAAATATTATAAA+GGG | - | tig0012617:1762-1781 | Msa1352550:intron | 15.0% |
| !!! | GATTTTTATTTCTTTATTTC+AGG | - | tig0012617:2049-2068 | Msa1352550:intron | 15.0% |
| !! | ATAATGATTTGAAAAAATAG+AGG | - | tig0012617:2312-2331 | Msa1352550:intron | 15.0% |
| !!! | TAAAAATATGTTACACTTTT+AGG | + | tig0012617:2594-2613 | None:intergenic | 15.0% |
| !! | GTGATAATAAAATACAAACA+TGG | - | tig0012617:53-72 | Msa1352550:three_prime_UTR | 20.0% |
| !! | AAAATGAAGTGAAATGAAAA+GGG | + | tig0012617:270-289 | None:intergenic | 20.0% |
| !!! | TTCTCATTTACATCATTTTT+TGG | - | tig0012617:528-547 | Msa1352550:intron | 20.0% |
| !!! | ACTTATTTGAGTTTATCTAT+AGG | - | tig0012617:795-814 | Msa1352550:intron | 20.0% |
| !! | TTCTTTCAATTTGATGTTAT+AGG | - | tig0012617:1241-1260 | Msa1352550:intron | 20.0% |
| !! | TATAAATTGGTACCTAAAAT+GGG | + | tig0012617:1681-1700 | None:intergenic | 20.0% |
| !! | ATATAAATTGGTACCTAAAA+TGG | + | tig0012617:1682-1701 | None:intergenic | 20.0% |
| !!! | GTTATTTCAGCTATATAAAT+TGG | + | tig0012617:1694-1713 | None:intergenic | 20.0% |
| !! | GCTTACTTTAAATCTTTATT+TGG | - | tig0012617:1872-1891 | Msa1352550:intron | 20.0% |
| !!! | TTTATACACTTACTTTTTGT+AGG | - | tig0012617:2610-2629 | Msa1352550:CDS | 20.0% |
| !! | TAAAAATATGCAGATTCTTA+TGG | - | tig0012617:2748-2767 | Msa1352550:five_prime_UTR | 20.0% |
| !! | AATAGAATTATTAATTCTGC+TGG | + | tig0012617:2950-2969 | None:intergenic | 20.0% |
| !!! | CTATTTTCTCAAATTATTAC+TGG | - | tig0012617:2965-2984 | Msa1352550:five_prime_UTR | 20.0% |
| ! | TTGCAAGTATATTATGTGTT+TGG | - | tig0012617:22-41 | Msa1352550:three_prime_UTR | 25.0% |
| ! | TGCAAGTATATTATGTGTTT+GGG | - | tig0012617:23-42 | Msa1352550:three_prime_UTR | 25.0% |
| !! | ATTATGTAATCTGAAACGAT+TGG | + | tig0012617:178-197 | None:intergenic | 25.0% |
| ! | AAAATGAGTGTATATGATTG+CGG | + | tig0012617:229-248 | None:intergenic | 25.0% |
| ! | GAAAATGAAGTGAAATGAAA+AGG | + | tig0012617:271-290 | None:intergenic | 25.0% |
| ! | GTAAGTATAAGAATACTAGT+TGG | + | tig0012617:460-479 | None:intergenic | 25.0% |
| !!! | TCATTTACATCATTTTTTGG+AGG | - | tig0012617:531-550 | Msa1352550:intron | 25.0% |
| ! | TTTAAAGAAAGTTCAAACCT+CGG | + | tig0012617:689-708 | None:intergenic | 25.0% |
| !!! | TTTATGCAGTATTCACTTTT+TGG | - | tig0012617:1070-1089 | Msa1352550:intron | 25.0% |
| !! | TTTGGTTCAATACTAACAAT+TGG | - | tig0012617:1088-1107 | Msa1352550:intron | 25.0% |
| ! | ATAGTTGAAATAGACAGAAT+TGG | + | tig0012617:1182-1201 | None:intergenic | 25.0% |
| ! | ACATTAGGACCTATAATAAA+TGG | - | tig0012617:1368-1387 | Msa1352550:CDS | 25.0% |
| ! | TACAACCTTCCATTTATTAT+AGG | + | tig0012617:1380-1399 | None:intergenic | 25.0% |
| !!! | TTTGGTTGATTTTTGTTTGA+AGG | - | tig0012617:1501-1520 | Msa1352550:intron | 25.0% |
| ! | AGGGTCAATAGTTTAAATTA+CGG | - | tig0012617:1781-1800 | Msa1352550:intron | 25.0% |
| ! | AATAGTTTAAATTACGGTTG+CGG | - | tig0012617:1787-1806 | Msa1352550:CDS | 25.0% |
| !! | TCAGAACTTTTATATTGATG+TGG | - | tig0012617:1810-1829 | Msa1352550:CDS | 25.0% |
| ! | GTATCACTAACTTATCTTAT+TGG | - | tig0012617:1927-1946 | Msa1352550:intron | 25.0% |
| !!! | CATCATTTTTGTCAAATTGT+AGG | - | tig0012617:2218-2237 | Msa1352550:intron | 25.0% |
| ! | ATTACATACTCTAATTTCAG+TGG | + | tig0012617:2516-2535 | None:intergenic | 25.0% |
| !! | AAACAGAAGCTAACATTTTT+GGG | - | tig0012617:2657-2676 | Msa1352550:CDS | 25.0% |
| ! | TAAGATAAGATGCATGAATT+GGG | + | tig0012617:2730-2749 | None:intergenic | 25.0% |
| ! | TTAAGATAAGATGCATGAAT+TGG | + | tig0012617:2731-2750 | None:intergenic | 25.0% |
| ! | TATTACATGATTCTCATGAA+AGG | - | tig0012617:3072-3091 | Msa1352550:five_prime_UTR | 25.0% |
| ! | ATTACATGATTCTCATGAAA+GGG | - | tig0012617:3073-3092 | Msa1352550:five_prime_UTR | 25.0% |
| AAATGAGTGTATATGATTGC+GGG | + | tig0012617:228-247 | None:intergenic | 30.0% | |
| TAAGATACACAGATGCTTTA+AGG | + | tig0012617:338-357 | None:intergenic | 30.0% | |
| !! | TAGTTTGACTTAGTTCTGTT+TGG | + | tig0012617:1044-1063 | None:intergenic | 30.0% |
| AATTTGATGTTATAGGCCAT+GGG | - | tig0012617:1248-1267 | Msa1352550:intron | 30.0% | |
| TAGGACCTATAATAAATGGA+AGG | - | tig0012617:1372-1391 | Msa1352550:CDS | 30.0% | |
| TAAGAAAGAATTCCCAAAAC+TGG | + | tig0012617:1456-1475 | None:intergenic | 30.0% | |
| !! | ATTTTTGTTTGAAGGTTGCT+TGG | - | tig0012617:1509-1528 | Msa1352550:intron | 30.0% |
| TATGTTGGAAGACTATTGTT+AGG | - | tig0012617:1538-1557 | Msa1352550:CDS | 30.0% | |
| AATGGGTATTCTATCATATG+TGG | - | tig0012617:1567-1586 | Msa1352550:intron | 30.0% | |
| !!! | TGACAGCTAATGATTTGTTT+TGG | - | tig0012617:1903-1922 | Msa1352550:intron | 30.0% |
| !!! | GACAGCTAATGATTTGTTTT+GGG | - | tig0012617:1904-1923 | Msa1352550:intron | 30.0% |
| !!! | ACAGCTAATGATTTGTTTTG+GGG | - | tig0012617:1905-1924 | Msa1352550:intron | 30.0% |
| ! | TTATTGGAGCATTCTTCAAT+TGG | - | tig0012617:1943-1962 | Msa1352550:CDS | 30.0% |
| ATAGGTAAAGATGTTCTTTC+TGG | - | tig0012617:1981-2000 | Msa1352550:CDS | 30.0% | |
| ATTGTTTGTGCTAATTGTGT+TGG | - | tig0012617:2165-2184 | Msa1352550:intron | 30.0% | |
| ! | GAATGTTGATATTTCTGAAG+AGG | - | tig0012617:2490-2509 | Msa1352550:intron | 30.0% |
| ! | CAAACAGAAGCTAACATTTT+TGG | - | tig0012617:2656-2675 | Msa1352550:CDS | 30.0% |
| TGGTATTTAGTCACATTGTT+AGG | - | tig0012617:2768-2787 | Msa1352550:five_prime_UTR | 30.0% | |
| ATTTAGTCACATTGTTAGGT+AGG | - | tig0012617:2772-2791 | Msa1352550:five_prime_UTR | 30.0% | |
| CAAACTGTTGTAGTATTATC+AGG | + | tig0012617:2804-2823 | None:intergenic | 30.0% | |
| CTGATAATACTACAACAGTT+TGG | - | tig0012617:2802-2821 | Msa1352550:five_prime_UTR | 30.0% | |
| ATAATACTACAACAGTTTGG+CGG | - | tig0012617:2805-2824 | Msa1352550:five_prime_UTR | 30.0% | |
| TAGCATATGACATGTAAAGA+AGG | - | tig0012617:3024-3043 | Msa1352550:five_prime_UTR | 30.0% | |
| ! | TAATCTGAAACGATTGGCAT+TGG | + | tig0012617:172-191 | None:intergenic | 35.0% |
| !! | GCTTTAAGGTTATGAAGAGT+AGG | + | tig0012617:324-343 | None:intergenic | 35.0% |
| !!! | GTCTCTGGTTCTTATGTTTT+TGG | - | tig0012617:493-512 | Msa1352550:intron | 35.0% |
| !!! | TTCTTATGTTTTTGGCTCTG+CGG | - | tig0012617:501-520 | Msa1352550:intron | 35.0% |
| !! | ATTGTTGGCTTTAGTTGACT+TGG | - | tig0012617:742-761 | Msa1352550:intron | 35.0% |
| AATACTAACAATTGGAGCGA+TGG | - | tig0012617:1096-1115 | Msa1352550:intron | 35.0% | |
| TGCTAAACTACCACTTACAA+TGG | + | tig0012617:1128-1147 | None:intergenic | 35.0% | |
| GACAGAATTGGAGAAACTTA+CGG | + | tig0012617:1170-1189 | None:intergenic | 35.0% | |
| CAATTTGATGTTATAGGCCA+TGG | - | tig0012617:1247-1266 | Msa1352550:intron | 35.0% | |
| TGGACAGAATTGAAGAAACA+CGG | + | tig0012617:1436-1455 | None:intergenic | 35.0% | |
| ! | TCTTCAATTCTGTCCAGTTT+TGG | - | tig0012617:1440-1459 | Msa1352550:intron | 35.0% |
| ! | CTTCAATTCTGTCCAGTTTT+GGG | - | tig0012617:1441-1460 | Msa1352550:intron | 35.0% |
| !! | GTAGTTGCTATTTGATGGTT+TGG | - | tig0012617:1483-1502 | Msa1352550:intron | 35.0% |
| ACTATTGTTAGGATGTGGAA+TGG | - | tig0012617:1549-1568 | Msa1352550:CDS | 35.0% | |
| CTATTGTTAGGATGTGGAAT+GGG | - | tig0012617:1550-1569 | Msa1352550:CDS | 35.0% | |
| TCCCAAGAAATGCAACAAAT+AGG | - | tig0012617:1645-1664 | Msa1352550:intron | 35.0% | |
| ! | GCCTATTTGTTGCATTTCTT+GGG | + | tig0012617:1649-1668 | None:intergenic | 35.0% |
| ! | TGCCTATTTGTTGCATTTCT+TGG | + | tig0012617:1650-1669 | None:intergenic | 35.0% |
| TATAGCTGAAATAACACCCA+AGG | - | tig0012617:1699-1718 | Msa1352550:intron | 35.0% | |
| TATTGATGTGGTCAGAAATG+CGG | - | tig0012617:1822-1841 | Msa1352550:CDS | 35.0% | |
| ! | ATTCTTCAATTGGAGGCTTT+TGG | - | tig0012617:1953-1972 | Msa1352550:CDS | 35.0% |
| TATCAACATTCTTTCCCCTA+AGG | + | tig0012617:2481-2500 | None:intergenic | 35.0% | |
| !! | TTCATTAGAGTGTTGACTTG+TGG | - | tig0012617:2545-2564 | Msa1352550:intron | 35.0% |
| !! | TCATTAGAGTGTTGACTTGT+GGG | - | tig0012617:2546-2565 | Msa1352550:intron | 35.0% |
| AGTTCTATATTTGTCTCTGC+TGG | - | tig0012617:2853-2872 | Msa1352550:five_prime_UTR | 35.0% | |
| !!! | TGGCATTGGTTTTGTTGTGA+AGG | + | tig0012617:158-177 | None:intergenic | 40.0% |
| AACTATCACTCTCATCTTGC+AGG | - | tig0012617:606-625 | Msa1352550:CDS | 40.0% | |
| ATCACAGATGACCTTGATCT+TGG | - | tig0012617:658-677 | Msa1352550:intron | 40.0% | |
| !! | GCTTTCTCTATGGCTTGTTT+GGG | - | tig0012617:769-788 | Msa1352550:intron | 40.0% |
| !! | GCTGTTTTCACAAGCTATCA+TGG | + | tig0012617:904-923 | None:intergenic | 40.0% |
| GGTAGTTTAGCAGATTATGC+AGG | - | tig0012617:1136-1155 | Msa1352550:CDS | 40.0% | |
| !! | AGTTACCTTTGAGACTGCAA+TGG | + | tig0012617:1309-1328 | None:intergenic | 40.0% |
| ACAGAATTGAAGAAACACGG+AGG | + | tig0012617:1433-1452 | None:intergenic | 40.0% | |
| CCATCAAATAGCAACTACGT+TGG | + | tig0012617:1481-1500 | None:intergenic | 40.0% | |
| !! | CCAACGTAGTTGCTATTTGA+TGG | - | tig0012617:1478-1497 | Msa1352550:intron | 40.0% |
| TTTGTTTGAAGGTTGCTTGG+TGG | - | tig0012617:1512-1531 | Msa1352550:intron | 40.0% | |
| GGAAGACTATTGTTAGGATG+TGG | - | tig0012617:1544-1563 | Msa1352550:CDS | 40.0% | |
| ATGCGGTTATTATGCTGTTG+CGG | - | tig0012617:1839-1858 | Msa1352550:intron | 40.0% | |
| ATGCTGTTGCGGATACATAT+AGG | - | tig0012617:1850-1869 | Msa1352550:intron | 40.0% | |
| ! | TTGGAGCATTCTTCAATTGG+AGG | - | tig0012617:1946-1965 | Msa1352550:CDS | 40.0% |
| !! | TGGAGGCTTTTGGCTATAAT+AGG | - | tig0012617:1963-1982 | Msa1352550:CDS | 40.0% |
| TCAATCCACTGACACAAACA+CGG | - | tig0012617:2264-2283 | Msa1352550:intron | 40.0% | |
| CAGTGTTTACGTGTCAATGT+CGG | + | tig0012617:2292-2311 | None:intergenic | 40.0% | |
| TGATAGTTGCATTGTTCTGC+AGG | - | tig0012617:2412-2431 | Msa1352550:intron | 40.0% | |
| AATCCACTTTACAGCACCTT+AGG | - | tig0012617:2462-2481 | Msa1352550:intron | 40.0% | |
| ATCCACTTTACAGCACCTTA+GGG | - | tig0012617:2463-2482 | Msa1352550:intron | 40.0% | |
| ! | TTGTGGGTTATCATCTAGCT+AGG | - | tig0012617:2562-2581 | Msa1352550:intron | 40.0% |
| TCACATTGTTAGGTAGGAGT+TGG | - | tig0012617:2778-2797 | Msa1352550:five_prime_UTR | 40.0% | |
| ATTAGTGAAGACGCCAGCTT+GGG | - | tig0012617:83-102 | Msa1352550:three_prime_UTR | 45.0% | |
| CATTCGCGAAGAAGCTAGTT+CGG | - | tig0012617:432-451 | Msa1352550:CDS | 45.0% | |
| TATCACTCTCATCTTGCAGG+TGG | - | tig0012617:609-628 | Msa1352550:CDS | 45.0% | |
| ATCACTCTCATCTTGCAGGT+GGG | - | tig0012617:610-629 | Msa1352550:CDS | 45.0% | |
| TATTCATCCCCTGCTCAATC+TGG | - | tig0012617:634-653 | Msa1352550:CDS | 45.0% | |
| TGTGATTCCAGATTGAGCAG+GGG | + | tig0012617:644-663 | None:intergenic | 45.0% | |
| CTGTGATTCCAGATTGAGCA+GGG | + | tig0012617:645-664 | None:intergenic | 45.0% | |
| TCTGTGATTCCAGATTGAGC+AGG | + | tig0012617:646-665 | None:intergenic | 45.0% | |
| !! | TGGCTTTAGTTGACTTGGAG+TGG | - | tig0012617:747-766 | Msa1352550:intron | 45.0% |
| ACTTGGAGTGGCTTTCTCTA+TGG | - | tig0012617:759-778 | Msa1352550:intron | 45.0% | |
| !! | GGCTTTCTCTATGGCTTGTT+TGG | - | tig0012617:768-787 | Msa1352550:intron | 45.0% |
| CTAACAATTGGAGCGATGGT+TGG | - | tig0012617:1100-1119 | Msa1352550:intron | 45.0% | |
| !! | ATGGTTGGTGCCATTGTAAG+TGG | - | tig0012617:1115-1134 | Msa1352550:intron | 45.0% |
| TCCGAGCTATGTTGCATCTT+GGG | - | tig0012617:1275-1294 | Msa1352550:intron | 45.0% | |
| TCCCAAGATGCAACATAGCT+CGG | + | tig0012617:1279-1298 | None:intergenic | 45.0% | |
| AGCTATGTTGCATCTTGGGA+TGG | - | tig0012617:1279-1298 | Msa1352550:intron | 45.0% | |
| !! | GTTGCTTGGTGGCTTTATGT+TGG | - | tig0012617:1523-1542 | Msa1352550:CDS | 45.0% |
| ! | GGCAGTTCTCTTCCCATTTT+AGG | - | tig0012617:1666-1685 | Msa1352550:intron | 45.0% |
| ATAACACCCAAGGATCTTCG+AGG | - | tig0012617:1709-1728 | Msa1352550:intron | 45.0% | |
| TAACACCCAAGGATCTTCGA+GGG | - | tig0012617:1710-1729 | Msa1352550:intron | 45.0% | |
| AATCTCCCTCGAAGATCCTT+GGG | + | tig0012617:1718-1737 | None:intergenic | 45.0% | |
| GAGATTCACTGCAGTTCATC+AGG | - | tig0012617:1732-1751 | Msa1352550:intron | 45.0% | |
| TTGCATTGTTCTGCAGGCAA+AGG | - | tig0012617:2418-2437 | Msa1352550:CDS | 45.0% | |
| ATTGTTCTGCAGGCAAAGGT+TGG | - | tig0012617:2422-2441 | Msa1352550:CDS | 45.0% | |
| TCCACTTTACAGCACCTTAG+GGG | - | tig0012617:2464-2483 | Msa1352550:intron | 45.0% | |
| CAACAGTTTGGCGGAGTTAA+CGG | - | tig0012617:2814-2833 | Msa1352550:five_prime_UTR | 45.0% | |
| TTGACCATCAGTGACATGTC+TGG | - | tig0012617:2988-3007 | Msa1352550:five_prime_UTR | 45.0% | |
| AACACCAGACATGTCACTGA+TGG | + | tig0012617:2995-3014 | None:intergenic | 45.0% | |
| ATCAGTGACATGTCTGGTGT+TGG | - | tig0012617:2994-3013 | Msa1352550:five_prime_UTR | 45.0% | |
| GATTAGTGAAGACGCCAGCT+TGG | - | tig0012617:82-101 | Msa1352550:three_prime_UTR | 50.0% | |
| AACGTTAAGAGCTCCCAAGC+TGG | + | tig0012617:99-118 | None:intergenic | 50.0% | |
| ! | CGAACTAGCTTCTTCGCGAA+TGG | + | tig0012617:434-453 | None:intergenic | 50.0% |
| AGAACCAGAGACAGCAGCAA+GGG | + | tig0012617:485-504 | None:intergenic | 50.0% | |
| AAGAACCAGAGACAGCAGCA+AGG | + | tig0012617:486-505 | None:intergenic | 50.0% | |
| ACATAGCTCGGAGAATCCCA+TGG | + | tig0012617:1267-1286 | None:intergenic | 50.0% | |
| CTCCGAGCTATGTTGCATCT+TGG | - | tig0012617:1274-1293 | Msa1352550:intron | 50.0% | |
| GCTTGCCATTGCAGTCTCAA+AGG | - | tig0012617:1301-1320 | Msa1352550:intron | 50.0% | |
| GAATCTCCCTCGAAGATCCT+TGG | + | tig0012617:1719-1738 | None:intergenic | 50.0% | |
| CTCAGAAGCTGTGCAAGACA+TGG | + | tig0012617:2082-2101 | None:intergenic | 50.0% | |
| CCTAGGAGACTCGGGAATAA+AGG | + | tig0012617:2110-2129 | None:intergenic | 50.0% | |
| CCTTTATTCCCGAGTCTCCT+AGG | - | tig0012617:2107-2126 | Msa1352550:intron | 50.0% | |
| TTATTCCCGAGTCTCCTAGG+TGG | - | tig0012617:2110-2129 | Msa1352550:intron | 50.0% | |
| ! | CAAAGGTTGGTCGCTTGGAA+AGG | - | tig0012617:2435-2454 | Msa1352550:CDS | 50.0% |
| !! | TCCCCTAAGGTGCTGTAAAG+TGG | + | tig0012617:2468-2487 | None:intergenic | 50.0% |
| ! | AGCTTCTGTTTGCTGCTGAG+AGG | + | tig0012617:2648-2667 | None:intergenic | 50.0% |
| GAACAACTCACCAGCCACCT+AGG | + | tig0012617:2127-2146 | None:intergenic | 55.0% | |
| ACCACCCTTGCTGCTGTCTC+TGG | - | tig0012617:478-497 | Msa1352550:intron | 60.0% | |
| ACCAGAGACAGCAGCAAGGG+TGG | + | tig0012617:482-501 | None:intergenic | 60.0% | |
| CCTCGGCTACGCCAAGATCA+AGG | + | tig0012617:672-691 | None:intergenic | 60.0% | |
| CCTTGATCTTGGCGTAGCCG+AGG | - | tig0012617:669-688 | Msa1352550:intron | 60.0% | |
| ACCAGCCACCTAGGAGACTC+GGG | + | tig0012617:2118-2137 | None:intergenic | 60.0% | |
| CACCAGCCACCTAGGAGACT+CGG | + | tig0012617:2119-2138 | None:intergenic | 60.0% | |
| !! | CGGTGCCGTGTTTGTGTCAG+TGG | + | tig0012617:2272-2291 | None:intergenic | 60.0% |
| ! | GCAGGCAAAGGTTGGTCGCT+TGG | - | tig0012617:2430-2449 | Msa1352550:CDS | 60.0% |
| TCCCGAGTCTCCTAGGTGGC+TGG | - | tig0012617:2114-2133 | Msa1352550:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0012617 | gene | 2 | 3104 | 2 | ID=Msa1352550;Name=Msa1352550 |
| tig0012617 | mRNA | 2 | 3104 | 2 | ID=Msa1352550-mRNA-1;Parent=Msa1352550;Name=Msa1352550-mRNA-1;_AED=0.36;_eAED=0.36;_QI=389|1|1|1|1|1|11|192|304 |
| tig0012617 | exon | 2 | 316 | 2 | ID=Msa1352550-mRNA-1:exon:8252;Parent=Msa1352550-mRNA-1 |
| tig0012617 | exon | 394 | 474 | 394 | ID=Msa1352550-mRNA-1:exon:8251;Parent=Msa1352550-mRNA-1 |
| tig0012617 | exon | 580 | 672 | 580 | ID=Msa1352550-mRNA-1:exon:8250;Parent=Msa1352550-mRNA-1 |
| tig0012617 | exon | 971 | 1035 | 971 | ID=Msa1352550-mRNA-1:exon:8249;Parent=Msa1352550-mRNA-1 |
| tig0012617 | exon | 1122 | 1197 | 1122 | ID=Msa1352550-mRNA-1:exon:8248;Parent=Msa1352550-mRNA-1 |
| tig0012617 | exon | 1353 | 1418 | 1353 | ID=Msa1352550-mRNA-1:exon:8247;Parent=Msa1352550-mRNA-1 |
| tig0012617 | exon | 1518 | 1583 | 1518 | ID=Msa1352550-mRNA-1:exon:8246;Parent=Msa1352550-mRNA-1 |
| tig0012617 | exon | 1784 | 1843 | 1784 | ID=Msa1352550-mRNA-1:exon:8245;Parent=Msa1352550-mRNA-1 |
| tig0012617 | exon | 1938 | 2027 | 1938 | ID=Msa1352550-mRNA-1:exon:8244;Parent=Msa1352550-mRNA-1 |
| tig0012617 | exon | 2416 | 2478 | 2416 | ID=Msa1352550-mRNA-1:exon:8243;Parent=Msa1352550-mRNA-1 |
| tig0012617 | exon | 2584 | 3104 | 2584 | ID=Msa1352550-mRNA-1:exon:8242;Parent=Msa1352550-mRNA-1 |
| tig0012617 | five_prime_UTR | 2716 | 3104 | 2716 | ID=Msa1352550-mRNA-1:five_prime_utr;Parent=Msa1352550-mRNA-1 |
| tig0012617 | CDS | 2584 | 2715 | 2584 | ID=Msa1352550-mRNA-1:cds;Parent=Msa1352550-mRNA-1 |
| tig0012617 | CDS | 2416 | 2478 | 2416 | ID=Msa1352550-mRNA-1:cds;Parent=Msa1352550-mRNA-1 |
| tig0012617 | CDS | 1938 | 2027 | 1938 | ID=Msa1352550-mRNA-1:cds;Parent=Msa1352550-mRNA-1 |
| tig0012617 | CDS | 1784 | 1843 | 1784 | ID=Msa1352550-mRNA-1:cds;Parent=Msa1352550-mRNA-1 |
| tig0012617 | CDS | 1518 | 1583 | 1518 | ID=Msa1352550-mRNA-1:cds;Parent=Msa1352550-mRNA-1 |
| tig0012617 | CDS | 1353 | 1418 | 1353 | ID=Msa1352550-mRNA-1:cds;Parent=Msa1352550-mRNA-1 |
| tig0012617 | CDS | 1122 | 1197 | 1122 | ID=Msa1352550-mRNA-1:cds;Parent=Msa1352550-mRNA-1 |
| tig0012617 | CDS | 971 | 1035 | 971 | ID=Msa1352550-mRNA-1:cds;Parent=Msa1352550-mRNA-1 |
| tig0012617 | CDS | 580 | 672 | 580 | ID=Msa1352550-mRNA-1:cds;Parent=Msa1352550-mRNA-1 |
| tig0012617 | CDS | 394 | 474 | 394 | ID=Msa1352550-mRNA-1:cds;Parent=Msa1352550-mRNA-1 |
| tig0012617 | CDS | 194 | 316 | 194 | ID=Msa1352550-mRNA-1:cds;Parent=Msa1352550-mRNA-1 |
| tig0012617 | three_prime_UTR | 2 | 193 | 2 | ID=Msa1352550-mRNA-1:three_prime_utr;Parent=Msa1352550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
