AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1213460


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1213460 MtrunA17_Chr4g0061951 97.861 374 8 0 1 374 1 374 0.0 770
Msa1213460 MtrunA17_Chr4g0061931 67.273 220 48 5 159 374 1 200 4.75e-92 274
Msa1213460 MtrunA17_Chr4g0061941 83.117 154 25 1 1 153 1 154 1.97e-91 271
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1213460 AT5G08170.1 71.850 373 105 0 1 373 1 373 0.0 575
Msa1213460 AT5G08170.4 72.701 348 95 0 26 373 20 367 0.0 539
Msa1213460 AT5G08170.2 74.048 289 75 0 85 373 1 289 9.73e-164 460
Msa1213460 AT5G08170.3 74.048 289 75 0 85 373 1 289 9.73e-164 460
Msa1213460 AT5G08170.5 74.048 289 75 0 85 373 1 289 9.73e-164 460

Find 102 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTATCATTGCTCCACAATT+TGG 0.199735 8_1:-73602782 Msa1213460:CDS
CCTTAAGTTCATCCTCTATT+TGG 0.200717 8_1:+73605015 None:intergenic
AGATTAGCTCCAACGATTCT+TGG 0.296878 8_1:-73605944 Msa1213460:CDS
CATGATCCGGTAGCTGATTC+CGG 0.299009 8_1:+73605979 None:intergenic
CATAACAGAATGAATGATTA+TGG 0.320951 8_1:+73606754 None:intergenic
GTTGAGAGAATATTTCTAAA+TGG 0.323501 8_1:+73602106 None:intergenic
TGGTTGCCTCATGGATTATA+TGG 0.334289 8_1:-73604966 Msa1213460:intron
TTGGAGTTAGGAAGGTTATA+TGG 0.342843 8_1:-73604986 Msa1213460:CDS
TTGTGGGAATTGAAGGTTCC+AGG 0.350594 8_1:-73602181 Msa1213460:CDS
TTAAATATTGTAATACTTGT+TGG 0.351571 8_1:-73601957 Msa1213460:three_prime_UTR
TTAAGGCATATCTTGGAGTT+AGG 0.360625 8_1:-73604998 Msa1213460:CDS
GACAGGAACGCGCCGATAAT+TGG 0.368550 8_1:-73606422 Msa1213460:intron
TGACTGGACTTTCAATAGTT+GGG 0.371650 8_1:-73605746 Msa1213460:CDS
GGAGCCAAGCCAAGGCTTCC+TGG 0.371687 8_1:-73602851 Msa1213460:CDS
CTTTCACATGCCTGCAGAAT+GGG 0.381399 8_1:-73606542 Msa1213460:CDS
TCTTTCTCAGTCATGTATAA+TGG 0.381846 8_1:+73603867 None:intergenic
TCCTAGGTTGTGGGAATTGA+AGG 0.384816 8_1:-73602188 Msa1213460:intron
TTGACTGGACTTTCAATAGT+TGG 0.389120 8_1:-73605747 Msa1213460:CDS
AGAATGATTGATTAATTGCT+TGG 0.402577 8_1:-73602049 Msa1213460:three_prime_UTR
TCCCATTCTATGGTGCTTGA+AGG 0.402654 8_1:-73605396 Msa1213460:CDS
GGAAGGTCTTAGACAGAATT+CGG 0.404780 8_1:+73602732 None:intergenic
AAGATGGATGTTACTGTGAT+TGG 0.407228 8_1:-73605567 Msa1213460:CDS
CTTGTTCAATAGACACTCTT+CGG 0.412003 8_1:+73605064 None:intergenic
CTGGTGTGGTTCTTCTGTCT+TGG 0.415700 8_1:-73604007 Msa1213460:CDS
ACCATAGAATGGGAAAATCT+AGG 0.420979 8_1:+73605405 None:intergenic
GGCACCGTCACGCCAATTAT+CGG 0.422589 8_1:+73606410 None:intergenic
ACTCTCAGTGTTGGATGGGT+TGG 0.424047 8_1:-73606513 Msa1213460:CDS
GATGAACTTAAGGCATATCT+TGG 0.425040 8_1:-73605005 Msa1213460:CDS
CGCCTTCAAGCACCATAGAA+TGG 0.425702 8_1:+73605394 None:intergenic
CCAAATAGAGGATGAACTTA+AGG 0.428188 8_1:-73605015 Msa1213460:CDS
GATGCGGAGCATAGGATTGC+GGG 0.431755 8_1:-73605772 Msa1213460:CDS
ATGATCCGGTAGCTGATTCC+GGG 0.431760 8_1:+73605980 None:intergenic
ATTTGGCTCTTACTCAAATG+TGG 0.433728 8_1:+73605032 None:intergenic
ACCTCACTCTCAGTGTTGGA+TGG 0.433943 8_1:-73606518 Msa1213460:CDS
CTCAGTCATGTATAATGGAC+CGG 0.444715 8_1:+73603872 None:intergenic
GGCGGAAGCATCCATGTAGA+TGG 0.446962 8_1:-73605375 Msa1213460:CDS
GTGATCAAACTCCATGTTCC+CGG 0.448519 8_1:-73603891 Msa1213460:CDS
TCAAGTATAACTGATGCTAA+TGG 0.454381 8_1:-73603927 Msa1213460:CDS
AGAGAATATTTCTAAATGGC+TGG 0.455579 8_1:+73602110 None:intergenic
AAATGTTTAGGTTTAGAAGA+TGG 0.456598 8_1:-73605583 Msa1213460:intron
GCCTTCAAGCACCATAGAAT+GGG 0.457536 8_1:+73605395 None:intergenic
AGTGTCTATTGAACAAGAAC+AGG 0.457681 8_1:-73605058 Msa1213460:CDS
CGTTTGTGCTAGTTCAGCTC+AGG 0.468384 8_1:-73606325 Msa1213460:intron
TTTGGCTCTTACTCAAATGT+GGG 0.487275 8_1:+73605033 None:intergenic
ATTATACATGACTGAGAAAG+AGG 0.489453 8_1:-73603865 Msa1213460:CDS
AATCCTATGCTCCGCATCAT+CGG 0.491261 8_1:+73605777 None:intergenic
ATAGGATTGCGGGAATTGAC+TGG 0.492124 8_1:-73605762 Msa1213460:CDS
CCTCACTCTCAGTGTTGGAT+GGG 0.496268 8_1:-73606517 Msa1213460:CDS
CGTCGAAACACGACTTGCAC+GGG 0.499614 8_1:+73601992 None:intergenic
TGTATAATGGACCGGGAACA+TGG 0.510017 8_1:+73603880 None:intergenic
AGAGATTGCAGCCGCCACTC+TGG 0.511265 8_1:+73606365 None:intergenic
CTGAGCTGAACTAGCACAAA+CGG 0.515091 8_1:+73606326 None:intergenic
AGTACCAGGAAGCCTTGGCT+TGG 0.515607 8_1:+73602847 None:intergenic
GGCATATCTTGGAGTTAGGA+AGG 0.517285 8_1:-73604994 Msa1213460:CDS
TCAACGACTCTAACATGATC+CGG 0.518148 8_1:+73605966 None:intergenic
ATGACTGAGAAAGAGGCTGC+TGG 0.520293 8_1:-73603858 Msa1213460:CDS
ACCTGACAAAACAATCTCCC+TGG 0.521534 8_1:+73602163 None:intergenic
TGACTGAGAAAGAGGCTGCT+GGG 0.523464 8_1:-73603857 Msa1213460:CDS
AGTCTAGTACCAGGAAGCCT+TGG 0.524063 8_1:+73602842 None:intergenic
GCTTTCACATGCCTGCAGAA+TGG 0.524863 8_1:-73606543 Msa1213460:CDS
GACTGGACTTTCAATAGTTG+GGG 0.526517 8_1:-73605745 Msa1213460:CDS
CAAAACAGATGAGTAAAAGT+AGG 0.528722 8_1:-73606817 Msa1213460:five_prime_UTR
ATGTGAAAGCCATGAAAAGA+AGG 0.530372 8_1:+73606556 None:intergenic
GTCACGAAACCAAGAATCGT+TGG 0.536081 8_1:+73605935 None:intergenic
GACTGAGAAAGAGGCTGCTG+GGG 0.537133 8_1:-73603856 Msa1213460:CDS
AAACACAAGTTGAGCATGAA+CGG 0.539621 8_1:+73606389 None:intergenic
AAGGTTATATGGTTGCCTCA+TGG 0.541390 8_1:-73604975 Msa1213460:CDS
TTTGAGTAAGAGCCAAATAG+AGG 0.541729 8_1:-73605027 Msa1213460:CDS
GGGAACCTCACTCTCAGTGT+TGG 0.541951 8_1:-73606522 Msa1213460:CDS
ACAGGAGATGATGATACAAA+TGG 0.542165 8_1:-73604062 Msa1213460:intron
GATTCTTGGTTTCGTGACAT+TGG 0.542389 8_1:-73605930 Msa1213460:CDS
GAGTGAGGTTCCCATTCTGC+AGG 0.542593 8_1:+73606532 None:intergenic
TGCAATGTAAAAGTTTACAT+AGG 0.549734 8_1:+73602811 None:intergenic
CGCGCCGATAATTGGCGTGA+CGG 0.553368 8_1:-73606414 Msa1213460:CDS
TTTGTTGATTCCTAGGTTGT+GGG 0.556323 8_1:-73602197 Msa1213460:intron
AAAATACTCACTTCATGATG+AGG 0.559236 8_1:+73602710 None:intergenic
TTGTTTAACAGTTTGTAGTG+AGG 0.572818 8_1:-73605816 Msa1213460:intron
AATCCGATGATGCGGAGCAT+AGG 0.574874 8_1:-73605780 Msa1213460:CDS
TCTCACCTTCTCCATCTACA+TGG 0.576000 8_1:+73605364 None:intergenic
TCTTCAGATCTTTCATACTG+AGG 0.576852 8_1:+73603966 None:intergenic
AGTAAAAGTAGGACGCGAGA+CGG 0.578441 8_1:-73606806 Msa1213460:five_prime_UTR
TGTGGGAATTGAAGGTTCCA+GGG 0.582236 8_1:-73602180 Msa1213460:CDS
CCCATCCAACACTGAGAGTG+AGG 0.583588 8_1:+73606517 None:intergenic
CATTCTATGGTGCTTGAAGG+CGG 0.592030 8_1:-73605393 Msa1213460:CDS
AACATTGAAATCCGATGATG+CGG 0.592828 8_1:-73605788 Msa1213460:CDS
GAATGCCCGGAATCAGCTAC+CGG 0.593981 8_1:-73605985 Msa1213460:CDS
AAATACTCACTTCATGATGA+GGG 0.594366 8_1:+73602711 None:intergenic
TCAACTTGTGTTTGCCAGAG+TGG 0.603974 8_1:-73606379 Msa1213460:CDS
TCGTGTTTCGACGCACATTG+TGG 0.604809 8_1:-73601982 Msa1213460:three_prime_UTR
GAAGCAGCAAGTCTAGTACC+AGG 0.605026 8_1:+73602833 None:intergenic
CAAGACAGAAGAACCACACC+AGG 0.606639 8_1:+73604008 None:intergenic
ATGGACAACGGCGACAACAA+AGG 0.607967 8_1:+73606773 None:intergenic
AGGATGATGGAGCCAAGCCA+AGG 0.607977 8_1:-73602859 Msa1213460:CDS
TGGACTTTCAATAGTTGGGG+AGG 0.614804 8_1:-73605742 Msa1213460:intron
AGCATCCATGTAGATGGAGA+AGG 0.617041 8_1:-73605369 Msa1213460:intron
TCAGTCATGTATAATGGACC+GGG 0.622248 8_1:+73603873 None:intergenic
ACTCACTTCATGATGAGGGA+AGG 0.632244 8_1:+73602715 None:intergenic
TGATGCGGAGCATAGGATTG+CGG 0.633163 8_1:-73605773 Msa1213460:CDS
ACTTGTGTTTGCCAGAGTGG+CGG 0.660221 8_1:-73606376 Msa1213460:CDS
GAATGAATGATTATGGACAA+CGG 0.668220 8_1:+73606761 None:intergenic
GTTCAATAGACACTCTTCGG+TGG 0.670209 8_1:+73605067 None:intergenic
TACATACCATATAATCCATG+AGG 0.692612 8_1:+73604960 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTAATTTATTTTTTT+TGG - chr8_1:73606023-73606042 Msa1213460:intron 0.0%
!! ATAAATTAGATTTAGATATT+GGG - chr8_1:73605568-73605587 Msa1213460:CDS 10.0%
!! AAGTAAATAAAAATACTTAC+GGG + chr8_1:73602229-73602248 None:intergenic 15.0%
!! GAAGTAAATAAAAATACTTA+CGG + chr8_1:73602230-73602249 None:intergenic 15.0%
!! ACGATTTATAACAATTAAAA+TGG + chr8_1:73602433-73602452 None:intergenic 15.0%
!!! ATTTTAATTGTTATAAATCG+TGG - chr8_1:73602432-73602451 Msa1213460:intron 15.0%
!! ATTTCTGATTTATAAGTATT+GGG + chr8_1:73602464-73602483 None:intergenic 15.0%
!! AATTTCTGATTTATAAGTAT+TGG + chr8_1:73602465-73602484 None:intergenic 15.0%
!!! TTGAGTTTTATAAAATGTTT+AGG - chr8_1:73603121-73603140 Msa1213460:intron 15.0%
!! TTCATGAAAAAATTACATTT+AGG + chr8_1:73603441-73603460 None:intergenic 15.0%
!! ATCTATAAAATCATGATAAA+TGG + chr8_1:73603871-73603890 None:intergenic 15.0%
!!! TCTACAATAATTTGATAATT+AGG - chr8_1:73605375-73605394 Msa1213460:CDS 15.0%
!! CATAAATTAGATTTAGATAT+TGG - chr8_1:73605567-73605586 Msa1213460:CDS 15.0%
!!! AACTTTGATATGTATTTTAT+TGG - chr8_1:73606633-73606652 Msa1213460:intron 15.0%
!! TTAAATATTGTAATACTTGT+TGG - chr8_1:73606759-73606778 Msa1213460:five_prime_UTR 15.0%
!! TAAATCAGAAATTATAACGA+TGG - chr8_1:73602472-73602491 Msa1213460:intron 20.0%
!! TAATAGGCAAATTCTAATAT+GGG + chr8_1:73602648-73602667 None:intergenic 20.0%
!! TCAATTTGAAGACTAATTAA+TGG - chr8_1:73603037-73603056 Msa1213460:intron 20.0%
!! TTGAATTGATTATTATGTCT+TGG - chr8_1:73603079-73603098 Msa1213460:intron 20.0%
!! ATGAAAAAATTACATTTAGG+TGG + chr8_1:73603438-73603457 None:intergenic 20.0%
!!! ATGTAATTTTTTCATGAATG+AGG - chr8_1:73603443-73603462 Msa1213460:intron 20.0%
!! AGCAATAATATCAATTCATA+GGG + chr8_1:73603814-73603833 None:intergenic 20.0%
!!! TAGCTATTTTTGAATTAAGA+TGG + chr8_1:73604237-73604256 None:intergenic 20.0%
!! GTAGAATAAAAATACAATTG+AGG + chr8_1:73604289-73604308 None:intergenic 20.0%
!! TTTATTCTACAAATTGAATC+AGG - chr8_1:73604299-73604318 Msa1213460:intron 20.0%
!! ATACTTCTTAATAACAACAT+AGG + chr8_1:73604624-73604643 None:intergenic 20.0%
!! AAAAAGAAAGAAACACAATT+TGG + chr8_1:73604902-73604921 None:intergenic 20.0%
!! CATTAAGAGTTAAATATAAC+TGG + chr8_1:73604925-73604944 None:intergenic 20.0%
!! TTTAAATTGAACACTGTAAA+AGG - chr8_1:73605541-73605560 Msa1213460:CDS 20.0%
! CATAACAGAATGAATGATTA+TGG + chr8_1:73601965-73601984 None:intergenic 25.0%
! AATAGGCAAATTCTAATATG+GGG + chr8_1:73602647-73602666 None:intergenic 25.0%
! GTAATAGGCAAATTCTAATA+TGG + chr8_1:73602649-73602668 None:intergenic 25.0%
! ACAAATTATCAGAACGTAAT+AGG + chr8_1:73602664-73602683 None:intergenic 25.0%
!!! TTGTTTCTAATTATGTGCTT+TGG - chr8_1:73602680-73602699 Msa1213460:intron 25.0%
! ATCAATTCAATGAATCACAT+TGG + chr8_1:73603069-73603088 None:intergenic 25.0%
!! AAATGTTTAGGTTTAGAAGA+TGG - chr8_1:73603133-73603152 Msa1213460:intron 25.0%
! AAAATCTACCAAACATGTAT+TGG + chr8_1:73603275-73603294 None:intergenic 25.0%
!! AATACATGTTTGGTAGATTT+TGG - chr8_1:73603274-73603293 Msa1213460:intron 25.0%
! ATTTCAAAAGCAATTCAGTA+AGG + chr8_1:73603575-73603594 None:intergenic 25.0%
! GAGCAATAATATCAATTCAT+AGG + chr8_1:73603815-73603834 None:intergenic 25.0%
! ATGAATTGATATTATTGCTC+AGG - chr8_1:73603815-73603834 Msa1213460:intron 25.0%
! AATAAGTATTTACCATGAAC+TGG + chr8_1:73604004-73604023 None:intergenic 25.0%
!! TCATATTGATTATCACAGAA+TGG - chr8_1:73604153-73604172 Msa1213460:intron 25.0%
!!! TTTTAGAGTGAAACAAAGTA+TGG - chr8_1:73604191-73604210 Msa1213460:intron 25.0%
! AATTCAAAAATAGCTAAGTC+TGG - chr8_1:73604241-73604260 Msa1213460:intron 25.0%
! ATTCAAAAATAGCTAAGTCT+GGG - chr8_1:73604242-73604261 Msa1213460:intron 25.0%
!!! TTCTTACAACTTTTTCTTTG+AGG - chr8_1:73604360-73604379 Msa1213460:intron 25.0%
!!! AGAAGTATGTTGTTTTATAC+AGG - chr8_1:73604636-73604655 Msa1213460:intron 25.0%
! ATTTGATGCTTTCAAATGAT+AGG - chr8_1:73605079-73605098 Msa1213460:CDS 25.0%
!!! ACTTCGTTTTAACCAATATA+AGG + chr8_1:73605105-73605124 None:intergenic 25.0%
! TTAAAACGAAGTTTAAGCAT+TGG - chr8_1:73605113-73605132 Msa1213460:intron 25.0%
!!! AGAGACTGAATATTTGTTTT+TGG - chr8_1:73605237-73605256 Msa1213460:intron 25.0%
!!! ACTGAATATTTGTTTTTGGT+TGG - chr8_1:73605241-73605260 Msa1213460:intron 25.0%
!!! TAGTTGCATTTTTCAAGTAT+TGG - chr8_1:73605270-73605289 Msa1213460:intron 25.0%
!! TTTTTCATATAATGAGTTGC+AGG + chr8_1:73605687-73605706 None:intergenic 25.0%
!! GGTGTAATTCTATATTTTTC+AGG - chr8_1:73605837-73605856 Msa1213460:intron 25.0%
!!! TTCTATATTTTTCAGGATGA+TGG - chr8_1:73605844-73605863 Msa1213460:intron 25.0%
! TGCAATGTAAAAGTTTACAT+AGG + chr8_1:73605908-73605927 None:intergenic 25.0%
!! GTAAACTTTTACATTGCAAA+TGG - chr8_1:73605910-73605929 Msa1213460:intron 25.0%
! ACAATTTGGAGATAAAAAGT+GGG - chr8_1:73605948-73605967 Msa1213460:CDS 25.0%
! TATAATGAAACTACTGGATT+GGG + chr8_1:73606390-73606409 None:intergenic 25.0%
! TAGTACTATAATGAAACTAC+TGG + chr8_1:73606396-73606415 None:intergenic 25.0%
! GTTTATGAACTGTAACATTT+AGG - chr8_1:73606451-73606470 Msa1213460:intron 25.0%
!!! TATAATGTTTGTTGATTCCT+AGG - chr8_1:73606512-73606531 Msa1213460:CDS 25.0%
!! GTTGAGAGAATATTTCTAAA+TGG + chr8_1:73606613-73606632 None:intergenic 25.0%
! AGAATGATTGATTAATTGCT+TGG - chr8_1:73606667-73606686 Msa1213460:intron 25.0%
CAAAACAGATGAGTAAAAGT+AGG - chr8_1:73601899-73601918 Msa1213460:three_prime_UTR 30.0%
GAATGAATGATTATGGACAA+CGG + chr8_1:73601958-73601977 None:intergenic 30.0%
TTGAGGGAAAATAATGAAGA+TGG + chr8_1:73602065-73602084 None:intergenic 30.0%
AATCGTTTCTGTTTCATTGA+GGG + chr8_1:73602081-73602100 None:intergenic 30.0%
CAAGCTTAATCATCATAACA+TGG + chr8_1:73602262-73602281 None:intergenic 30.0%
! TAGAGGTCTAATCATTTTCA+CGG + chr8_1:73602564-73602583 None:intergenic 30.0%
!! TCTTGAACATTTTCAAGCAT+TGG - chr8_1:73602614-73602633 Msa1213460:intron 30.0%
TCTAATTATGTGCTTTGGTT+TGG - chr8_1:73602685-73602704 Msa1213460:intron 30.0%
! AGTTTTTCTGACCATTTTCA+GGG - chr8_1:73602819-73602838 Msa1213460:CDS 30.0%
TTGTTTAACAGTTTGTAGTG+AGG - chr8_1:73602900-73602919 Msa1213460:intron 30.0%
GATTATTATGTCTTGGTTGT+TGG - chr8_1:73603086-73603105 Msa1213460:intron 30.0%
! ACCTAACCTTCTTTTTAACA+AGG + chr8_1:73603186-73603205 None:intergenic 30.0%
TGTTAAAAAGAAGGTTAGGT+TGG - chr8_1:73603186-73603205 Msa1213460:intron 30.0%
GAGTTAATGCAGTGATTTAT+TGG - chr8_1:73603373-73603392 Msa1213460:intron 30.0%
! TTTTCATGAATGAGGATTAG+TGG - chr8_1:73603451-73603470 Msa1213460:intron 30.0%
AAGGATATCTAAGTTTCAAG+CGG + chr8_1:73603556-73603575 None:intergenic 30.0%
TACATACCATATAATCCATG+AGG + chr8_1:73603759-73603778 None:intergenic 30.0%
!!! CATTGGTTTTATGTTGACTT+CGG + chr8_1:73603936-73603955 None:intergenic 30.0%
TGAACTAATTGAGTAAGATC+TGG + chr8_1:73604136-73604155 None:intergenic 30.0%
!! CTTTGTTTCACTCTAAAATG+CGG + chr8_1:73604189-73604208 None:intergenic 30.0%
TACAAATTGAATCAGGAAGT+TGG - chr8_1:73604306-73604325 Msa1213460:intron 30.0%
TCTAATAAATATCCCAGCTT+GGG + chr8_1:73604528-73604547 None:intergenic 30.0%
ACAGAGACACTCTAATAAAT+GGG - chr8_1:73604555-73604574 Msa1213460:intron 30.0%
ATAAATGGGATACACGATTT+AGG - chr8_1:73604569-73604588 Msa1213460:intron 30.0%
! ATACACGATTTAGGTTCAAA+AGG - chr8_1:73604578-73604597 Msa1213460:intron 30.0%
TCAAGTATAACTGATGCTAA+TGG - chr8_1:73604789-73604808 Msa1213460:intron 30.0%
TCTTTCTCAGTCATGTATAA+TGG + chr8_1:73604852-73604871 None:intergenic 30.0%
ATTATACATGACTGAGAAAG+AGG - chr8_1:73604851-73604870 Msa1213460:intron 30.0%
!! AGTGTATCTTTGTTTCTGTA+TGG - chr8_1:73605000-73605019 Msa1213460:CDS 30.0%
!! TTTGAAAGCATCAAATCATC+TGG + chr8_1:73605075-73605094 None:intergenic 30.0%
! TCAAATGATAGGCCTTATAT+TGG - chr8_1:73605090-73605109 Msa1213460:intron 30.0%
TGGATGTAGTGTTTCTTTAA+TGG - chr8_1:73605290-73605309 Msa1213460:intron 30.0%
ATTGTAGAGATGCAATCATA+GGG + chr8_1:73605363-73605382 None:intergenic 30.0%
TATTGTAGAGATGCAATCAT+AGG + chr8_1:73605364-73605383 None:intergenic 30.0%
TATCCTATTGGAAACAAAAC+TGG + chr8_1:73605425-73605444 None:intergenic 30.0%
!!! AGTTTTGTTTCCAATAGGAT+AGG - chr8_1:73605424-73605443 Msa1213460:CDS 30.0%
GATATTACATCCTATCCTAT+TGG + chr8_1:73605437-73605456 None:intergenic 30.0%
ATCTGAGTAGTAAATGCAAT+AGG + chr8_1:73605486-73605505 None:intergenic 30.0%
TATTCATTCTTAACCATACC+AGG + chr8_1:73605744-73605763 None:intergenic 30.0%
TACACAATATAAACCTCTAC+TGG - chr8_1:73605807-73605826 Msa1213460:CDS 30.0%
!! CACTTTTTATCTCCAAATTG+TGG + chr8_1:73605949-73605968 None:intergenic 30.0%
CACAATTTGGAGATAAAAAG+TGG - chr8_1:73605947-73605966 Msa1213460:CDS 30.0%
AAATACTCACTTCATGATGA+GGG + chr8_1:73606008-73606027 None:intergenic 30.0%
AAAATACTCACTTCATGATG+AGG + chr8_1:73606009-73606028 None:intergenic 30.0%
!! CTTATTCATGATGATTTGGT+TGG + chr8_1:73606323-73606342 None:intergenic 30.0%
ATCGCTTATTCATGATGATT+TGG + chr8_1:73606327-73606346 None:intergenic 30.0%
CTATAATGAAACTACTGGAT+TGG + chr8_1:73606391-73606410 None:intergenic 30.0%
!!! GTATCACTTTTGAGTTGTTT+TGG - chr8_1:73606473-73606492 Msa1213460:intron 30.0%
! AGAGAATATTTCTAAATGGC+TGG + chr8_1:73606609-73606628 None:intergenic 30.0%
! GATTTTCAAATGCAACTAGT+TGG - chr8_1:73606698-73606717 Msa1213460:intron 30.0%
CAATCGTTTCTGTTTCATTG+AGG + chr8_1:73602082-73602101 None:intergenic 35.0%
ATGTGAAAGCCATGAAAAGA+AGG + chr8_1:73602163-73602182 None:intergenic 35.0%
! AAACACAAGTTGAGCATGAA+CGG + chr8_1:73602330-73602349 None:intergenic 35.0%
ATTGTTATAAATCGTGGACC+CGG - chr8_1:73602438-73602457 Msa1213460:intron 35.0%
!! TGATTTATAAGTATTGGGCC+GGG + chr8_1:73602459-73602478 None:intergenic 35.0%
!! CTGATTTATAAGTATTGGGC+CGG + chr8_1:73602460-73602479 None:intergenic 35.0%
!! TTATGTGCTTTGGTTTGGTT+CGG - chr8_1:73602690-73602709 Msa1213460:intron 35.0%
!! GTTCGGTTCATGATTTTAGT+GGG - chr8_1:73602707-73602726 Msa1213460:intron 35.0%
! GAGTTTTTCTGACCATTTTC+AGG - chr8_1:73602818-73602837 Msa1213460:CDS 35.0%
TCAAAGAATTGCCCTGAAAA+TGG + chr8_1:73602833-73602852 None:intergenic 35.0%
AACATTGAAATCCGATGATG+CGG - chr8_1:73602928-73602947 Msa1213460:intron 35.0%
TTGACTGGACTTTCAATAGT+TGG - chr8_1:73602969-73602988 Msa1213460:intron 35.0%
TGACTGGACTTTCAATAGTT+GGG - chr8_1:73602970-73602989 Msa1213460:intron 35.0%
AAGATGGATGTTACTGTGAT+TGG - chr8_1:73603149-73603168 Msa1213460:intron 35.0%
! GCCTTGTTAAAAAGAAGGTT+AGG - chr8_1:73603182-73603201 Msa1213460:intron 35.0%
! ATTTATTCACGTTCTAGCTG+TGG - chr8_1:73603224-73603243 Msa1213460:intron 35.0%
TGACACTACCAATACATGTT+TGG - chr8_1:73603264-73603283 Msa1213460:intron 35.0%
! TCCTAGATTTTCCCATTCTA+TGG - chr8_1:73603310-73603329 Msa1213460:intron 35.0%
ACCATAGAATGGGAAAATCT+AGG + chr8_1:73603314-73603333 None:intergenic 35.0%
TGATGTTTAATCACAAGAGC+TGG + chr8_1:73603411-73603430 None:intergenic 35.0%
! AATGAGGATTAGTGGCAATT+AGG - chr8_1:73603459-73603478 Msa1213460:intron 35.0%
! TAGCAATTTTTCCTTCCTTC+AGG - chr8_1:73603615-73603634 Msa1213460:intron 35.0%
TAATACATGTTCCTGAAGGA+AGG + chr8_1:73603629-73603648 None:intergenic 35.0%
CTTGTTCAATAGACACTCTT+CGG + chr8_1:73603655-73603674 None:intergenic 35.0%
AGTGTCTATTGAACAAGAAC+AGG - chr8_1:73603658-73603677 Msa1213460:intron 35.0%
!! TTTGGCTCTTACTCAAATGT+GGG + chr8_1:73603686-73603705 None:intergenic 35.0%
!! ATTTGGCTCTTACTCAAATG+TGG + chr8_1:73603687-73603706 None:intergenic 35.0%
TTTGAGTAAGAGCCAAATAG+AGG - chr8_1:73603689-73603708 Msa1213460:intron 35.0%
CCTTAAGTTCATCCTCTATT+TGG + chr8_1:73603704-73603723 None:intergenic 35.0%
CCAAATAGAGGATGAACTTA+AGG - chr8_1:73603701-73603720 Msa1213460:intron 35.0%
GATGAACTTAAGGCATATCT+TGG - chr8_1:73603711-73603730 Msa1213460:intron 35.0%
TTAAGGCATATCTTGGAGTT+AGG - chr8_1:73603718-73603737 Msa1213460:intron 35.0%
TTGGAGTTAGGAAGGTTATA+TGG - chr8_1:73603730-73603749 Msa1213460:intron 35.0%
CGAAGTCAACATAAAACCAA+TGG - chr8_1:73603934-73603953 Msa1213460:CDS 35.0%
TTATATAGCTGCATCTGCAA+TGG + chr8_1:73603969-73603988 None:intergenic 35.0%
TGGCAAGAGAATAACTTATG+TGG - chr8_1:73604075-73604094 Msa1213460:intron 35.0%
GTCTAATAAATATCCCAGCT+TGG + chr8_1:73604529-73604548 None:intergenic 35.0%
! CATTTATTAGAGTGTCTCTG+TGG + chr8_1:73604556-73604575 None:intergenic 35.0%
CACAGAGACACTCTAATAAA+TGG - chr8_1:73604554-73604573 Msa1213460:intron 35.0%
ACAGGAGATGATGATACAAA+TGG - chr8_1:73604654-73604673 Msa1213460:intron 35.0%
!!! ATAACATGTGCTGTTTTGTG+AGG - chr8_1:73604685-73604704 Msa1213460:intron 35.0%
TCTTCAGATCTTTCATACTG+AGG + chr8_1:73604753-73604772 None:intergenic 35.0%
AGATACACTCTGATGGTAAT+AGG + chr8_1:73604989-73605008 None:intergenic 35.0%
GAAACAAAGATACACTCTGA+TGG + chr8_1:73604996-73605015 None:intergenic 35.0%
! AGTTTAAGATGTCATGTTCG+CGG - chr8_1:73605034-73605053 Msa1213460:CDS 35.0%
! GGTCTATATAGTTTTCCATG+TGG + chr8_1:73605179-73605198 None:intergenic 35.0%
AGTGGACAGCAAAAATTCTT+AGG + chr8_1:73605200-73605219 None:intergenic 35.0%
!! ATTTTTGCTGTCCACTTTGA+AGG - chr8_1:73605204-73605223 Msa1213460:intron 35.0%
TTCATCTGAATCCTTCAAAG+TGG + chr8_1:73605218-73605237 None:intergenic 35.0%
TGTTTCTTTAATGGAGTCTC+TGG - chr8_1:73605299-73605318 Msa1213460:intron 35.0%
TGGTTAAATGGTAACCTCAA+AGG - chr8_1:73605326-73605345 Msa1213460:intron 35.0%
!!! AAGCCAGTTTTGTTTCCAAT+AGG - chr8_1:73605419-73605438 Msa1213460:CDS 35.0%
TAGCAAGATTGATTGATACC+TGG - chr8_1:73605723-73605742 Msa1213460:intron 35.0%
AGATTGATTGATACCTGGTA+TGG - chr8_1:73605728-73605747 Msa1213460:intron 35.0%
TTTCCAAGTGATGAAGTTTG+TGG - chr8_1:73606183-73606202 Msa1213460:intron 35.0%
!! TTTGTTGATTCCTAGGTTGT+GGG - chr8_1:73606519-73606538 Msa1213460:CDS 35.0%
! GAAAACACGCCTTCTTTTCA+TGG - chr8_1:73602151-73602170 Msa1213460:CDS 40.0%
GCTTGATGTTATTGTGTGAC+AGG - chr8_1:73602277-73602296 Msa1213460:intron 40.0%
! ATCATTTTCACGGTTGAGAC+AGG + chr8_1:73602554-73602573 None:intergenic 40.0%
ATTTCGTCTCTCAGAAGTAG+AGG + chr8_1:73602581-73602600 None:intergenic 40.0%
!!! CATTTTCAAGCATTGGTCCA+TGG - chr8_1:73602621-73602640 Msa1213460:intron 40.0%
CAAATTCTAATATGGGGCCA+TGG + chr8_1:73602641-73602660 None:intergenic 40.0%
!! GGTTCGGTTCATGATTTTAG+TGG - chr8_1:73602706-73602725 Msa1213460:intron 40.0%
TCAACGACTCTAACATGATC+CGG + chr8_1:73602753-73602772 None:intergenic 40.0%
! AGATTAGCTCCAACGATTCT+TGG - chr8_1:73602772-73602791 Msa1213460:CDS 40.0%
GATTCTTGGTTTCGTGACAT+TGG - chr8_1:73602786-73602805 Msa1213460:CDS 40.0%
TGGTCAGAAAAACTCACAGT+GGG + chr8_1:73602813-73602832 None:intergenic 40.0%
ATGGTCAGAAAAACTCACAG+TGG + chr8_1:73602814-73602833 None:intergenic 40.0%
GACTGGACTTTCAATAGTTG+GGG - chr8_1:73602971-73602990 Msa1213460:intron 40.0%
!! CGACAGCCTTGTTAAAAAGA+AGG - chr8_1:73603177-73603196 Msa1213460:intron 40.0%
! GGTAGATTTTGGATGTTGAG+AGG - chr8_1:73603285-73603304 Msa1213460:intron 40.0%
CCTGAAGACAAAAGAGTAGA+CGG + chr8_1:73603519-73603538 None:intergenic 40.0%
GTGGTAATACATGTTCCTGA+AGG + chr8_1:73603633-73603652 None:intergenic 40.0%
AAGGTTATATGGTTGCCTCA+TGG - chr8_1:73603741-73603760 Msa1213460:intron 40.0%
! TGGTTGCCTCATGGATTATA+TGG - chr8_1:73603750-73603769 Msa1213460:intron 40.0%
GCAATGGTTCATTACTCCAT+TGG + chr8_1:73603953-73603972 None:intergenic 40.0%
GATTCAACACAAGAACAGAC+AGG + chr8_1:73604050-73604069 None:intergenic 40.0%
TTCTTGTGTTGAATCCACTC+TGG - chr8_1:73604055-73604074 Msa1213460:CDS 40.0%
AAGTTATTCTCTTGCCAGAG+TGG + chr8_1:73604072-73604091 None:intergenic 40.0%
GCTATCACCATGTACTTATG+AGG - chr8_1:73604108-73604127 Msa1213460:intron 40.0%
! TCTGGAACCTCATAAGTACA+TGG + chr8_1:73604118-73604137 None:intergenic 40.0%
!! TTGAATCAGGAAGTTGGTAG+TGG - chr8_1:73604312-73604331 Msa1213460:intron 40.0%
TGGGAACTTCTTTGAATGTG+TGG + chr8_1:73604509-73604528 None:intergenic 40.0%
ATTCAAAGAAGTTCCCAAGC+TGG - chr8_1:73604512-73604531 Msa1213460:intron 40.0%
TTCAAAGAAGTTCCCAAGCT+GGG - chr8_1:73604513-73604532 Msa1213460:intron 40.0%
!! TCAGTCATGTATAATGGACC+GGG + chr8_1:73604846-73604865 None:intergenic 40.0%
!! CTCAGTCATGTATAATGGAC+CGG + chr8_1:73604847-73604866 None:intergenic 40.0%
TGTCGCGAAACACATATCAT+TGG - chr8_1:73605145-73605164 Msa1213460:intron 40.0%
GCGAAACACATATCATTGGA+CGG - chr8_1:73605149-73605168 Msa1213460:intron 40.0%
CGAAACACATATCATTGGAC+GGG - chr8_1:73605150-73605169 Msa1213460:intron 40.0%
GATATTGGGCATGCAATCTT+TGG - chr8_1:73605582-73605601 Msa1213460:intron 40.0%
TGCAGGATAGTCTCATCATT+AGG + chr8_1:73605670-73605689 None:intergenic 40.0%
TAAACCTCTACTGGATGTTC+TGG - chr8_1:73605816-73605835 Msa1213460:intron 40.0%
GCTATCATTGCTCCACAATT+TGG - chr8_1:73605934-73605953 Msa1213460:CDS 40.0%
GGAAGGTCTTAGACAGAATT+CGG + chr8_1:73605987-73606006 None:intergenic 40.0%
CACTAACTACTGCAGTTATG+TGG - chr8_1:73606132-73606151 Msa1213460:intron 40.0%
TAGTTTGAGCCACAGATCTT+CGG + chr8_1:73606209-73606228 None:intergenic 40.0%
! GATTTGGTTGGATGAGAACA+TGG + chr8_1:73606311-73606330 None:intergenic 40.0%
! TTGGGACATTTGCGATTTTG+TGG + chr8_1:73606372-73606391 None:intergenic 40.0%
!! GTTTGTTGATTCCTAGGTTG+TGG - chr8_1:73606518-73606537 Msa1213460:CDS 40.0%
AGTAAAAGTAGGACGCGAGA+CGG - chr8_1:73601910-73601929 Msa1213460:three_prime_UTR 45.0%
! CGGCGACAACAAAGGATTTT+AGG + chr8_1:73601938-73601957 None:intergenic 45.0%
CTTTCACATGCCTGCAGAAT+GGG - chr8_1:73602174-73602193 Msa1213460:CDS 45.0%
TCAACTTGTGTTTGCCAGAG+TGG - chr8_1:73602337-73602356 Msa1213460:intron 45.0%
CTGAGCTGAACTAGCACAAA+CGG + chr8_1:73602393-73602412 None:intergenic 45.0%
!! GATTTTAGTGGGAGAATGCC+CGG - chr8_1:73602718-73602737 Msa1213460:intron 45.0%
GTCACGAAACCAAGAATCGT+TGG + chr8_1:73602784-73602803 None:intergenic 45.0%
AATCCTATGCTCCGCATCAT+CGG + chr8_1:73602942-73602961 None:intergenic 45.0%
ATAGGATTGCGGGAATTGAC+TGG - chr8_1:73602954-73602973 Msa1213460:intron 45.0%
TGGACTTTCAATAGTTGGGG+AGG - chr8_1:73602974-73602993 Msa1213460:intron 45.0%
TCCCATTCTATGGTGCTTGA+AGG - chr8_1:73603320-73603339 Msa1213460:intron 45.0%
GCCTTCAAGCACCATAGAAT+GGG + chr8_1:73603324-73603343 None:intergenic 45.0%
CATTCTATGGTGCTTGAAGG+CGG - chr8_1:73603323-73603342 Msa1213460:intron 45.0%
AGCATCCATGTAGATGGAGA+AGG - chr8_1:73603347-73603366 Msa1213460:intron 45.0%
TCTCACCTTCTCCATCTACA+TGG + chr8_1:73603355-73603374 None:intergenic 45.0%
! CCGTCTACTCTTTTGTCTTC+AGG - chr8_1:73603516-73603535 Msa1213460:intron 45.0%
GTTCAATAGACACTCTTCGG+TGG + chr8_1:73603652-73603671 None:intergenic 45.0%
GGCATATCTTGGAGTTAGGA+AGG - chr8_1:73603722-73603741 Msa1213460:intron 45.0%
CAAGTTGCTCAACCAGTTCA+TGG - chr8_1:73603989-73604008 Msa1213460:CDS 45.0%
GTGATCAAACTCCATGTTCC+CGG - chr8_1:73604825-73604844 Msa1213460:intron 45.0%
!! TGTATAATGGACCGGGAACA+TGG + chr8_1:73604839-73604858 None:intergenic 45.0%
! GTTCGCGGTTTTCTTTTCTG+TGG - chr8_1:73605049-73605068 Msa1213460:CDS 45.0%
TTAATGGAGTCTCTGGTGTC+TGG - chr8_1:73605306-73605325 Msa1213460:intron 45.0%
GTCTCTGGTGTCTGGTTAAA+TGG - chr8_1:73605314-73605333 Msa1213460:intron 45.0%
GCAATCATAGGGTTACCACT+GGG + chr8_1:73605352-73605371 None:intergenic 45.0%
TGCAATCATAGGGTTACCAC+TGG + chr8_1:73605353-73605372 None:intergenic 45.0%
GCTGAGAGCAAAACAATGAG+AGG + chr8_1:73605518-73605537 None:intergenic 45.0%
!! GCATGCAATCTTTGGAATGC+TGG - chr8_1:73605590-73605609 Msa1213460:intron 45.0%
GAATGCTGGTAGTTAGCAGT+CGG - chr8_1:73605604-73605623 Msa1213460:intron 45.0%
TACACCAGAACATCCAGTAG+AGG + chr8_1:73605823-73605842 None:intergenic 45.0%
ACTCACTTCATGATGAGGGA+AGG + chr8_1:73606004-73606023 None:intergenic 45.0%
TCCTAGGTTGTGGGAATTGA+AGG - chr8_1:73606528-73606547 Msa1213460:CDS 45.0%
ACCTTCAATTCCCACAACCT+AGG + chr8_1:73606532-73606551 None:intergenic 45.0%
TTGTGGGAATTGAAGGTTCC+AGG - chr8_1:73606535-73606554 Msa1213460:CDS 45.0%
TGTGGGAATTGAAGGTTCCA+GGG - chr8_1:73606536-73606555 Msa1213460:CDS 45.0%
!! TCCAGGGAGATTGTTTTGTC+AGG - chr8_1:73606552-73606571 Msa1213460:CDS 45.0%
ACCTGACAAAACAATCTCCC+TGG + chr8_1:73606556-73606575 None:intergenic 45.0%
!! AGGGAGATTGTTTTGTCAGG+TGG - chr8_1:73606555-73606574 Msa1213460:CDS 45.0%
!!! TTTAATTTTAATTATAAAGT+CGG + chr8_1:73602531-73602550 None:intergenic 5.0%
!!! TTTATAGATTTTTTTTTTTT+TGG - chr8_1:73603882-73603901 Msa1213460:CDS 5.0%
!!! TTATAGATTTTTTTTTTTTT+GGG - chr8_1:73603883-73603902 Msa1213460:CDS 5.0%
ATGGACAACGGCGACAACAA+AGG + chr8_1:73601946-73601965 None:intergenic 50.0%
GCTTTCACATGCCTGCAGAA+TGG - chr8_1:73602173-73602192 Msa1213460:CDS 50.0%
! ACCTCACTCTCAGTGTTGGA+TGG - chr8_1:73602198-73602217 Msa1213460:intron 50.0%
! CCTCACTCTCAGTGTTGGAT+GGG - chr8_1:73602199-73602218 Msa1213460:intron 50.0%
! ACTCTCAGTGTTGGATGGGT+TGG - chr8_1:73602203-73602222 Msa1213460:intron 50.0%
ACTTGTGTTTGCCAGAGTGG+CGG - chr8_1:73602340-73602359 Msa1213460:intron 50.0%
CGTTTGTGCTAGTTCAGCTC+AGG - chr8_1:73602391-73602410 Msa1213460:intron 50.0%
TGTGCTAGTTCAGCTCAGGT+TGG - chr8_1:73602395-73602414 Msa1213460:intron 50.0%
! ATGATCCGGTAGCTGATTCC+GGG + chr8_1:73602739-73602758 None:intergenic 50.0%
! CATGATCCGGTAGCTGATTC+CGG + chr8_1:73602740-73602759 None:intergenic 50.0%
AATCCGATGATGCGGAGCAT+AGG - chr8_1:73602936-73602955 Msa1213460:intron 50.0%
TGATGCGGAGCATAGGATTG+CGG - chr8_1:73602943-73602962 Msa1213460:intron 50.0%
CGCCTTCAAGCACCATAGAA+TGG + chr8_1:73603325-73603344 None:intergenic 50.0%
!!! ATGTGCTGTTTTGTGAGGCC+TGG - chr8_1:73604690-73604709 Msa1213460:intron 50.0%
CAAGACAGAAGAACCACACC+AGG + chr8_1:73604711-73604730 None:intergenic 50.0%
CTGGTGTGGTTCTTCTGTCT+TGG - chr8_1:73604709-73604728 Msa1213460:intron 50.0%
ATGACTGAGAAAGAGGCTGC+TGG - chr8_1:73604858-73604877 Msa1213460:intron 50.0%
TGACTGAGAAAGAGGCTGCT+GGG - chr8_1:73604859-73604878 Msa1213460:intron 50.0%
TCATTGGACGGGATACCACA+TGG - chr8_1:73605161-73605180 Msa1213460:intron 50.0%
AGTCTAGTACCAGGAAGCCT+TGG + chr8_1:73605877-73605896 None:intergenic 50.0%
GAAGCAGCAAGTCTAGTACC+AGG + chr8_1:73605886-73605905 None:intergenic 50.0%
CGGCCACAAACTTCATCACT+TGG + chr8_1:73606189-73606208 None:intergenic 50.0%
AGTTTGTGGCCGAAGATCTG+TGG - chr8_1:73606197-73606216 Msa1213460:intron 50.0%
TCGTGTTTCGACGCACATTG+TGG - chr8_1:73606734-73606753 Msa1213460:intron 50.0%
GAGTGAGGTTCCCATTCTGC+AGG + chr8_1:73602187-73602206 None:intergenic 55.0%
GGGAACCTCACTCTCAGTGT+TGG - chr8_1:73602194-73602213 Msa1213460:intron 55.0%
CCCATCCAACACTGAGAGTG+AGG + chr8_1:73602202-73602221 None:intergenic 55.0%
! GACAGGAACGCGCCGATAAT+TGG - chr8_1:73602294-73602313 Msa1213460:intron 55.0%
GGCACCGTCACGCCAATTAT+CGG + chr8_1:73602309-73602328 None:intergenic 55.0%
GAATGCCCGGAATCAGCTAC+CGG - chr8_1:73602731-73602750 Msa1213460:CDS 55.0%
GATGCGGAGCATAGGATTGC+GGG - chr8_1:73602944-73602963 Msa1213460:intron 55.0%
!! GGCGGAAGCATCCATGTAGA+TGG - chr8_1:73603341-73603360 Msa1213460:intron 55.0%
! CTGTTTTGTGAGGCCTGGTG+TGG - chr8_1:73604695-73604714 Msa1213460:intron 55.0%
GACTGAGAAAGAGGCTGCTG+GGG - chr8_1:73604860-73604879 Msa1213460:intron 55.0%
! AGAGGCTGCTGGGGTTTTTC+AGG - chr8_1:73604869-73604888 Msa1213460:intron 55.0%
TGGTAACCTCAAAGGCCCAG+TGG - chr8_1:73605334-73605353 Msa1213460:intron 55.0%
!! AGGATGATGGAGCCAAGCCA+AGG - chr8_1:73605857-73605876 Msa1213460:intron 55.0%
AGTACCAGGAAGCCTTGGCT+TGG + chr8_1:73605872-73605891 None:intergenic 55.0%
CGTCGAAACACGACTTGCAC+GGG + chr8_1:73606727-73606746 None:intergenic 55.0%
GCGTCGAAACACGACTTGCA+CGG + chr8_1:73606728-73606747 None:intergenic 55.0%
! CGCGCCGATAATTGGCGTGA+CGG - chr8_1:73602302-73602321 Msa1213460:intron 60.0%
AGAGATTGCAGCCGCCACTC+TGG + chr8_1:73602354-73602373 None:intergenic 60.0%
GGGTTACCACTGGGCCTTTG+AGG + chr8_1:73605343-73605362 None:intergenic 60.0%
GGAGCCAAGCCAAGGCTTCC+TGG - chr8_1:73605865-73605884 Msa1213460:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 73601870 73606868 73601870 ID=Msa1213460;Name=Msa1213460
chr8_1 mRNA 73601870 73606868 73601870 ID=Msa1213460-mRNA-1;Parent=Msa1213460;Name=Msa1213460-mRNA-1;_AED=0.34;_eAED=0.34;_QI=160|1|1|1|0.9|0.81|11|251|374
chr8_1 exon 73601870 73602204 73601870 ID=Msa1213460-mRNA-1:exon:25139;Parent=Msa1213460-mRNA-1
chr8_1 exon 73602721 73602879 73602721 ID=Msa1213460-mRNA-1:exon:25138;Parent=Msa1213460-mRNA-1
chr8_1 exon 73603848 73604080 73603848 ID=Msa1213460-mRNA-1:exon:25137;Parent=Msa1213460-mRNA-1
chr8_1 exon 73604967 73605101 73604967 ID=Msa1213460-mRNA-1:exon:25136;Parent=Msa1213460-mRNA-1
chr8_1 exon 73605370 73605448 73605370 ID=Msa1213460-mRNA-1:exon:25135;Parent=Msa1213460-mRNA-1
chr8_1 exon 73605540 73605595 73605540 ID=Msa1213460-mRNA-1:exon:25134;Parent=Msa1213460-mRNA-1
chr8_1 exon 73605743 73605827 73605743 ID=Msa1213460-mRNA-1:exon:25133;Parent=Msa1213460-mRNA-1
chr8_1 exon 73605923 73606012 73605923 ID=Msa1213460-mRNA-1:exon:25132;Parent=Msa1213460-mRNA-1
chr8_1 exon 73606326 73606439 73606326 ID=Msa1213460-mRNA-1:exon:25131;Parent=Msa1213460-mRNA-1
chr8_1 exon 73606510 73606645 73606510 ID=Msa1213460-mRNA-1:exon:25130;Parent=Msa1213460-mRNA-1
chr8_1 exon 73606755 73606868 73606755 ID=Msa1213460-mRNA-1:exon:25129;Parent=Msa1213460-mRNA-1
chr8_1 five_prime_UTR 73606755 73606868 73606755 ID=Msa1213460-mRNA-1:five_prime_utr;Parent=Msa1213460-mRNA-1
chr8_1 five_prime_UTR 73606600 73606645 73606600 ID=Msa1213460-mRNA-1:five_prime_utr;Parent=Msa1213460-mRNA-1
chr8_1 CDS 73606510 73606599 73606510 ID=Msa1213460-mRNA-1:cds;Parent=Msa1213460-mRNA-1
chr8_1 CDS 73606326 73606439 73606326 ID=Msa1213460-mRNA-1:cds;Parent=Msa1213460-mRNA-1
chr8_1 CDS 73605923 73606012 73605923 ID=Msa1213460-mRNA-1:cds;Parent=Msa1213460-mRNA-1
chr8_1 CDS 73605743 73605827 73605743 ID=Msa1213460-mRNA-1:cds;Parent=Msa1213460-mRNA-1
chr8_1 CDS 73605540 73605595 73605540 ID=Msa1213460-mRNA-1:cds;Parent=Msa1213460-mRNA-1
chr8_1 CDS 73605370 73605448 73605370 ID=Msa1213460-mRNA-1:cds;Parent=Msa1213460-mRNA-1
chr8_1 CDS 73604967 73605101 73604967 ID=Msa1213460-mRNA-1:cds;Parent=Msa1213460-mRNA-1
chr8_1 CDS 73603848 73604080 73603848 ID=Msa1213460-mRNA-1:cds;Parent=Msa1213460-mRNA-1
chr8_1 CDS 73602721 73602879 73602721 ID=Msa1213460-mRNA-1:cds;Parent=Msa1213460-mRNA-1
chr8_1 CDS 73602121 73602204 73602121 ID=Msa1213460-mRNA-1:cds;Parent=Msa1213460-mRNA-1
chr8_1 three_prime_UTR 73601870 73602120 73601870 ID=Msa1213460-mRNA-1:three_prime_utr;Parent=Msa1213460-mRNA-1
Gene Sequence

>Msa1213460

ATGATGCATCTAGAAAACACGCCTTCTTTTCATGGCTTTCACATGCCTGCAGAATGGGAACCTCACTCTCAGTGTTGGATGGGTTGGCCCGAACGCGCCGATAATTGGCGTGACGGTGCCGTTCATGCTCAACTTGTGTTTGCCAGAGTGGCGGCTGCAATCTCTAGATTCGAGAAAGTCACCGTTTGTGCTAGTTCAGCTCAGTGGGAGAATGCCCGGAATCAGCTACCGGATCATGTTAGAGTCGTTGAGATTAGCTCCAACGATTCTTGGTTTCGTGACATTGGACCCACTTTTGTAGTGAGGAGAGAAACATTGAAATCCGATGATGCGGAGCATAGGATTGCGGGAATTGACTGGACTTTCAATAGTTGGGGAGGTTTAGAAGATGGATGTTACTGTGATTGGAGTCTCGACAGCCTTGTTAAAAAGAAGATTTTGGATGTTGAGAGGATTCCTAGATTTTCCCATTCTATGGTGCTTGAAGGCGGAAGCATCCATGTAGATGGAGAAGGAACATGTATTACCACCGAAGAGTGTCTATTGAACAAGAACAGGAACCCACATTTGAGTAAGAGCCAAATAGAGGATGAACTTAAGGCATATCTTGGAGTTAGGAAGGTTATATGGTTGCCTCATGGATTATATGGAGATGATGATACAAATGGTCATGTTGATAACATGTGCTGTTTTGTGAGGCCTGGTGTGGTTCTTCTGTCTTGGACTGATGATAAAACTGATCCTCAGTATGAAAGATCTGAAGAAGCATATTCTTTGTTTTCAAGTATAACTGATGCTAATGGTAGAAAATTTGAAGTGATCAAACTCCATGTTCCCGGTCCATTATACATGACTGAGAAAGAGGCTGCTGGGGTTTTTCAGGATGATGGAGCCAAGCCAAGGCTTCCTGGTACTAGACTTGCTGCTTCCTATGTAAACTTTTACATTGCAAATGGTGCTATCATTGCTCCACAATTTGGAGATAAAAAGTGGGATGATGAAGCTATCCGAATTCTGTCTAAGACCTTCCCTCATCATGAAGTTGTGGGAATTGAAGGTTCCAGGGAGATTGTTTTGTCAGGTGGAAATATACATTGCATCACTCAGCAACAACCAGCCATTTAG

Protein sequence

>Msa1213460

MMHLENTPSFHGFHMPAEWEPHSQCWMGWPERADNWRDGAVHAQLVFARVAAAISRFEKVTVCASSAQWENARNQLPDHVRVVEISSNDSWFRDIGPTFVVRRETLKSDDAEHRIAGIDWTFNSWGGLEDGCYCDWSLDSLVKKKILDVERIPRFSHSMVLEGGSIHVDGEGTCITTEECLLNKNRNPHLSKSQIEDELKAYLGVRKVIWLPHGLYGDDDTNGHVDNMCCFVRPGVVLLSWTDDKTDPQYERSEEAYSLFSSITDANGRKFEVIKLHVPGPLYMTEKEAAGVFQDDGAKPRLPGTRLAASYVNFYIANGAIIAPQFGDKKWDDEAIRILSKTFPHHEVVGIEGSREIVLSGGNIHCITQQQPAI*