AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1128780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1128780 MtrunA17_Chr7g0273281 77.727 440 98 0 22 461 57 496 0.0 719
Msa1128780 MtrunA17_Chr4g0066581 54.605 456 204 2 7 461 34 487 2.29e-178 509
Msa1128780 MtrunA17_Chr7g0273261 97.581 248 4 1 236 483 15 260 1.37e-172 485
Msa1128780 MtrunA17_Chr2g0286721 54.233 437 199 1 26 461 48 484 3.24e-171 491
Msa1128780 MtrunA17_Chr7g0259471 51.835 436 210 0 26 461 39 474 9.09e-158 456
Msa1128780 MtrunA17_Chr7g0259221 53.349 433 202 0 29 461 44 476 2.76e-157 455
Msa1128780 MtrunA17_Chr7g0273271 97.573 206 5 0 1 206 1 206 6.02e-139 398
Msa1128780 MtrunA17_Chr1g0155221 47.111 450 227 3 14 457 41 485 1.20e-138 408
Msa1128780 MtrunA17_Chr8g0373181 45.572 463 246 4 5 461 24 486 5.86e-135 398
Msa1128780 MtrunA17_Chr8g0373191 44.218 441 215 5 27 459 39 456 5.05e-118 354
Msa1128780 MtrunA17_Chr7g0250881 32.359 479 289 11 2 462 43 504 2.09e-69 229
Msa1128780 MtrunA17_Chr6g0457781 33.493 418 252 8 60 461 136 543 2.95e-69 230
Msa1128780 MtrunA17_Chr5g0404191 46.053 228 118 1 15 242 43 265 5.06e-65 212
Msa1128780 MtrunA17_Chr4g0021771 29.668 482 303 9 17 473 45 515 7.90e-61 207
Msa1128780 MtrunA17_Chr4g0039651 30.952 462 281 10 28 459 46 499 3.90e-57 197
Msa1128780 MtrunA17_Chr1g0213631 32.124 386 243 8 87 457 48 429 1.70e-56 194
Msa1128780 MtrunA17_Chr4g0032021 31.486 451 262 13 42 460 119 554 2.52e-56 196
Msa1128780 MtrunA17_Chr1g0213611 31.155 459 278 11 26 457 78 525 3.01e-56 196
Msa1128780 MtrunA17_Chr7g0214451 32.287 446 277 9 32 457 36 476 7.57e-56 194
Msa1128780 MtrunA17_Chr2g0282031 31.350 437 280 7 38 457 64 497 4.60e-55 192
Msa1128780 MtrunA17_Chr6g0486021 28.898 481 312 11 1 464 23 490 4.20e-51 181
Msa1128780 MtrunA17_Chr4g0004821 30.856 444 280 10 38 466 47 478 6.83e-50 177
Msa1128780 MtrunA17_Chr4g0034681 28.414 454 289 9 38 459 41 490 2.73e-47 171
Msa1128780 MtrunA17_Chr3g0144361 25.662 491 329 9 4 463 9 494 1.37e-45 166
Msa1128780 MtrunA17_Chr8g0373531 28.481 474 307 8 38 481 30 501 7.47e-45 164
Msa1128780 MtrunA17_Chr6g0485661 27.803 446 287 9 34 452 65 502 1.51e-44 163
Msa1128780 MtrunA17_Chr5g0432581 27.426 474 305 9 38 477 30 498 6.40e-44 161
Msa1128780 MtrunA17_Chr4g0036021 26.096 456 304 7 38 463 38 490 8.61e-44 161
Msa1128780 MtrunA17_Chr5g0394341 26.981 467 305 8 24 456 19 483 5.33e-41 154
Msa1128780 MtrunA17_Chr3g0119401 28.040 403 270 9 71 461 139 533 3.27e-40 152
Msa1128780 MtrunA17_Chr3g0115721 26.551 403 282 5 67 456 82 483 2.65e-39 149
Msa1128780 MtrunA17_Chr3g0128171 25.604 414 289 6 67 463 36 447 6.54e-38 144
Msa1128780 MtrunA17_Chr3g0078791 26.667 405 260 6 67 456 28 410 7.69e-38 143
Msa1128780 MtrunA17_Chr8g0390141 27.340 406 273 8 67 456 86 485 1.37e-37 144
Msa1128780 MtrunA17_Chr2g0303731 30.409 342 215 8 37 361 36 371 1.71e-37 145
Msa1128780 MtrunA17_Chr2g0303731 38.835 103 62 1 360 461 452 554 5.80e-13 71.2
Msa1128780 MtrunA17_Chr1g0205691 28.040 403 275 5 67 456 83 483 2.17e-37 144
Msa1128780 MtrunA17_Chr3g0128081 26.961 408 275 6 67 456 83 485 2.49e-37 143
Msa1128780 MtrunA17_Chr6g0486681 28.993 407 265 9 67 456 86 485 2.53e-37 143
Msa1128780 MtrunA17_Chr6g0486671 28.993 407 265 9 67 456 86 485 2.53e-37 143
Msa1128780 MtrunA17_Chr4g0065324 26.749 486 306 11 17 463 19 493 3.45e-37 143
Msa1128780 MtrunA17_Chr8g0390261 26.914 405 276 7 67 456 86 485 5.93e-37 142
Msa1128780 MtrunA17_Chr5g0403831 26.737 475 314 7 32 475 36 507 7.97e-37 142
Msa1128780 MtrunA17_Chr4g0048411 28.205 390 263 5 83 457 99 486 1.30e-36 141
Msa1128780 MtrunA17_Chr3g0085971 28.537 410 268 8 67 457 82 485 1.34e-36 141
Msa1128780 MtrunA17_Chr3g0115741 25.248 404 286 4 67 456 85 486 2.63e-36 140
Msa1128780 MtrunA17_Chr8g0390521 25.474 475 315 10 13 457 3 468 2.75e-36 140
Msa1128780 MtrunA17_Chr1g0205681 25.263 475 311 10 24 460 20 488 5.30e-36 139
Msa1128780 MtrunA17_Chr5g0417611 25.845 414 288 6 67 463 84 495 8.88e-36 139
Msa1128780 MtrunA17_Chr5g0420841 26.115 471 302 10 27 457 21 485 9.95e-36 139
Msa1128780 MtrunA17_Chr3g0121674 33.216 283 175 7 184 456 4 282 1.23e-35 134
Msa1128780 MtrunA17_Chr4g0065311 25.427 468 301 10 27 456 21 478 1.90e-35 137
Msa1128780 MtrunA17_Chr1g0205671 25.310 403 286 5 67 456 83 483 2.01e-35 137
Msa1128780 MtrunA17_Chr3g0115781 24.691 405 289 4 67 457 84 486 3.33e-35 137
Msa1128780 MtrunA17_Chr3g0115751 26.290 407 278 7 67 456 87 488 1.17e-34 135
Msa1128780 MtrunA17_Chr2g0290181 27.954 347 225 6 27 351 27 370 1.91e-34 136
Msa1128780 MtrunA17_Chr2g0290181 36.792 106 62 3 359 461 454 557 1.11e-11 67.0
Msa1128780 MtrunA17_Chr3g0078971 25.268 467 314 9 24 457 20 484 2.32e-34 135
Msa1128780 MtrunA17_Chr4g0048051 28.244 393 257 7 83 456 99 485 5.62e-34 134
Msa1128780 MtrunA17_Chr3g0115711 24.378 402 291 5 67 456 82 482 8.23e-33 130
Msa1128780 MtrunA17_Chr5g0404181 45.736 129 62 2 339 461 6 132 1.13e-32 120
Msa1128780 MtrunA17_Chr2g0303701 29.861 288 185 6 87 363 89 370 1.41e-32 130
Msa1128780 MtrunA17_Chr5g0445601 25.641 468 306 9 24 456 24 484 8.88e-32 127
Msa1128780 MtrunA17_Chr8g0376611 30.104 289 189 4 76 351 11 299 1.49e-31 127
Msa1128780 MtrunA17_Chr8g0376611 40.777 103 60 1 360 461 382 484 8.73e-14 73.6
Msa1128780 MtrunA17_Chr1g0164851 26.290 407 278 7 67 457 84 484 5.47e-31 125
Msa1128780 MtrunA17_Chr1g0164871 26.044 407 279 7 67 457 84 484 8.18e-31 125
Msa1128780 MtrunA17_Chr7g0257631 26.303 403 276 7 69 456 122 518 1.14e-29 122
Msa1128780 MtrunA17_Chr3g0078991 24.411 467 319 9 24 457 20 485 2.33e-29 120
Msa1128780 MtrunA17_Chr8g0376601 29.066 289 185 6 87 361 89 371 5.54e-29 120
Msa1128780 MtrunA17_Chr8g0376601 43.478 92 51 1 360 450 450 541 3.79e-12 68.6
Msa1128780 MtrunA17_Chr8g0376631 29.773 309 199 6 37 328 36 343 2.82e-28 118
Msa1128780 MtrunA17_Chr8g0376631 40.187 107 55 2 360 461 451 553 7.50e-13 70.9
Msa1128780 MtrunA17_Chr5g0437021 26.044 407 279 7 67 457 84 484 5.47e-28 116
Msa1128780 MtrunA17_Chr3g0115731 25.436 287 205 3 178 456 177 462 5.55e-26 110
Msa1128780 MtrunA17_Chr7g0221631 64.706 68 24 0 360 427 50 117 1.50e-25 100
Msa1128780 MtrunA17_Chr4g0065351 26.687 326 220 7 145 456 1 321 1.41e-24 104
Msa1128780 MtrunA17_Chr2g0290161 26.910 301 177 7 85 371 21 292 9.74e-24 103
Msa1128780 MtrunA17_Chr3g0146061 32.558 215 128 4 254 454 510 721 5.56e-22 99.8
Msa1128780 MtrunA17_Chr3g0146061 37.267 161 86 3 75 224 54 210 5.58e-16 80.9
Msa1128780 MtrunA17_Chr8g0370151 32.569 218 126 5 253 454 130 342 1.61e-21 95.9
Msa1128780 MtrunA17_Chr3g0144261 35.135 185 112 3 55 232 32 215 3.50e-21 97.1
Msa1128780 MtrunA17_Chr3g0144261 31.604 212 120 5 261 454 507 711 2.89e-19 91.3
Msa1128780 MtrunA17_Chr5g0419321 32.547 212 118 4 261 454 525 729 4.22e-21 97.1
Msa1128780 MtrunA17_Chr5g0419321 30.814 172 111 3 68 232 75 245 3.97e-17 84.3
Msa1128780 MtrunA17_Chr5g0407441 31.250 208 126 3 261 454 499 703 1.16e-20 95.5
Msa1128780 MtrunA17_Chr5g0407441 27.928 222 148 5 27 238 4 223 5.23e-17 84.0
Msa1128780 MtrunA17_Chr5g0434261 27.010 311 172 11 184 450 4 303 3.63e-17 82.4
Msa1128780 MtrunA17_Chr7g0259451 64.000 50 18 0 376 425 1 50 1.92e-16 73.2
Msa1128780 MtrunA17_Chr5g0434231 29.268 164 96 2 71 233 9 153 4.05e-15 72.8
Msa1128780 MtrunA17_Chr5g0434251 39.806 103 61 1 360 461 38 140 1.24e-13 68.6
Msa1128780 MtrunA17_Chr2g0319001 24.336 452 265 20 57 474 119 527 5.02e-12 68.2
Msa1128780 MtrunA17_Chr5g0446681 33.621 116 77 0 51 166 30 145 5.19e-12 66.6
Msa1128780 MtrunA17_Chr8g0370141 26.341 205 127 5 64 244 40 244 1.64e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1128780 AT1G54730.2 67.550 453 147 0 9 461 14 466 0.0 612
Msa1128780 AT1G54730.5 63.355 453 145 1 9 461 14 445 0.0 560
Msa1128780 AT1G54730.3 67.221 421 138 0 9 429 14 434 0.0 558
Msa1128780 AT1G54730.4 62.708 421 136 1 9 429 14 413 4.24e-178 506
Msa1128780 AT1G54730.9 66.841 383 127 0 9 391 14 396 3.21e-175 498
Msa1128780 AT1G54730.7 66.841 383 127 0 9 391 14 396 3.21e-175 498
Msa1128780 AT2G48020.2 52.597 462 217 1 3 462 2 463 1.51e-173 496
Msa1128780 AT2G48020.1 52.597 462 217 1 3 462 2 463 1.51e-173 496
Msa1128780 AT5G18840.1 53.468 447 207 1 16 461 33 479 2.64e-165 476
Msa1128780 AT1G08930.1 49.776 446 224 0 16 461 47 492 1.88e-156 454
Msa1128780 AT1G08930.2 49.776 446 224 0 16 461 47 492 1.88e-156 454
Msa1128780 AT1G54730.8 61.880 383 125 1 9 391 14 375 1.98e-155 447
Msa1128780 AT3G05165.3 47.672 451 236 0 11 461 14 464 4.84e-153 444
Msa1128780 AT3G05165.2 47.672 451 236 0 11 461 14 464 4.84e-153 444
Msa1128780 AT3G05165.1 47.672 451 236 0 11 461 14 464 4.84e-153 444
Msa1128780 AT1G08920.1 50.000 440 220 0 24 463 29 468 1.01e-152 443
Msa1128780 AT5G27360.1 47.884 449 234 0 12 460 20 468 1.55e-152 443
Msa1128780 AT3G05160.1 47.450 451 237 0 11 461 5 455 1.59e-152 442
Msa1128780 AT5G27360.3 47.884 449 234 0 12 460 68 516 5.55e-152 443
Msa1128780 AT1G08920.2 49.217 447 220 1 24 463 29 475 1.28e-150 438
Msa1128780 AT3G05150.1 50.111 449 219 2 13 460 25 469 1.67e-150 437
Msa1128780 AT3G05150.3 50.111 449 219 2 13 460 25 469 1.67e-150 437
Msa1128780 AT3G05150.2 50.111 449 219 2 13 460 25 469 2.44e-150 438
Msa1128780 AT3G05400.1 47.973 444 231 0 16 459 15 458 1.18e-149 435
Msa1128780 AT5G27350.1 48.330 449 232 0 12 460 16 464 1.21e-149 436
Msa1128780 AT1G08900.1 49.115 452 229 1 9 460 8 458 1.58e-149 435
Msa1128780 AT1G08900.2 49.115 452 229 1 9 460 8 458 1.58e-149 435
Msa1128780 AT3G20460.1 47.312 465 239 2 2 461 24 487 3.40e-149 435
Msa1128780 AT1G54730.11 65.741 324 111 0 9 332 14 337 2.88e-145 419
Msa1128780 AT1G08890.1 49.554 448 222 3 16 460 14 460 2.82e-144 422
Msa1128780 AT3G05160.3 48.889 405 207 0 57 461 2 406 1.55e-143 417
Msa1128780 AT3G05160.2 48.889 405 207 0 57 461 2 406 1.55e-143 417
Msa1128780 AT4G04760.1 47.945 438 225 1 24 458 28 465 2.50e-142 417
Msa1128780 AT3G05155.1 45.671 462 247 2 1 461 1 459 4.00e-142 416
Msa1128780 AT1G08900.3 47.788 452 227 2 9 460 8 450 9.74e-142 415
Msa1128780 AT4G04750.1 47.672 451 234 1 13 461 22 472 2.12e-141 415
Msa1128780 AT4G04750.2 47.672 451 234 1 13 461 22 472 2.12e-141 415
Msa1128780 AT4G04750.3 47.672 451 234 1 13 461 66 516 4.89e-141 416
Msa1128780 AT1G08900.5 49.275 414 210 0 47 460 3 416 2.73e-140 410
Msa1128780 AT3G05400.2 45.946 444 220 1 16 459 15 438 1.71e-138 406
Msa1128780 AT3G05165.6 46.667 420 224 0 11 430 14 433 1.25e-137 406
Msa1128780 AT4G04760.3 49.257 404 202 1 58 458 3 406 1.15e-134 395
Msa1128780 AT1G08920.3 49.005 402 205 0 24 425 29 430 4.61e-134 395
Msa1128780 AT1G08900.4 47.722 417 217 1 9 425 8 423 4.49e-132 389
Msa1128780 AT1G19450.1 45.495 455 226 5 15 458 42 485 3.77e-131 389
Msa1128780 AT1G54730.10 64.667 300 106 0 9 308 14 313 1.10e-129 379
Msa1128780 AT1G54730.6 64.667 300 106 0 9 308 14 313 1.10e-129 379
Msa1128780 AT4G04760.2 46.136 440 227 3 24 458 28 462 1.16e-129 385
Msa1128780 AT1G75220.1 45.133 452 232 4 15 458 41 484 3.11e-129 384
Msa1128780 AT3G05165.4 46.059 406 219 0 11 416 14 419 1.30e-128 382
Msa1128780 AT3G05165.5 46.059 406 219 0 11 416 14 419 1.30e-128 382
Msa1128780 AT5G27360.2 49.176 364 185 0 97 460 1 364 1.42e-127 375
Msa1128780 AT5G27360.5 49.176 364 185 0 97 460 1 364 1.42e-127 375
Msa1128780 AT2G48020.4 50.847 354 172 1 16 367 15 368 3.42e-123 365
Msa1128780 AT5G27360.4 41.527 419 228 1 12 430 20 421 3.45e-114 343
Msa1128780 AT2G48020.3 52.050 317 150 1 16 330 15 331 1.35e-111 334
Msa1128780 AT3G05155.2 46.667 315 165 1 15 329 15 326 2.13e-95 291
Msa1128780 AT5G16150.2 34.772 417 248 9 60 461 136 543 2.34e-65 220
Msa1128780 AT5G16150.1 34.772 417 248 9 60 461 136 543 2.34e-65 220
Msa1128780 AT5G16150.3 34.772 417 248 9 60 461 136 543 2.34e-65 220
Msa1128780 AT3G03090.1 31.788 453 271 11 37 459 57 501 1.60e-55 193
Msa1128780 AT5G17010.1 31.828 443 264 12 43 459 71 501 2.56e-54 190
Msa1128780 AT5G17010.3 31.828 443 264 12 43 459 71 501 2.56e-54 190
Msa1128780 AT5G17010.4 31.828 443 264 12 43 459 71 501 2.56e-54 190
Msa1128780 AT5G59250.1 31.313 495 290 13 4 460 74 556 9.02e-54 189
Msa1128780 AT2G20780.1 30.206 437 283 6 38 457 66 497 1.15e-52 186
Msa1128780 AT2G43330.1 31.739 460 272 13 26 457 31 476 3.20e-52 184
Msa1128780 AT2G20780.2 30.969 423 266 8 55 457 23 439 3.62e-52 183
Msa1128780 AT1G67300.2 31.151 443 283 10 32 460 56 490 1.35e-50 180
Msa1128780 AT1G67300.1 31.236 445 279 10 32 460 56 489 3.52e-50 179
Msa1128780 AT1G67300.3 31.236 445 279 10 32 460 56 489 3.52e-50 179
Msa1128780 AT1G05030.2 29.557 406 271 6 71 467 73 472 3.53e-47 170
Msa1128780 AT1G05030.1 29.557 406 271 6 71 467 125 524 3.55e-47 171
Msa1128780 AT3G18830.1 26.749 486 305 10 38 476 47 528 2.38e-46 169
Msa1128780 AT1G79820.2 29.955 444 272 9 38 460 65 490 6.28e-45 164
Msa1128780 AT1G79820.1 29.955 444 272 9 38 460 65 490 6.28e-45 164
Msa1128780 AT2G18480.1 27.964 447 290 6 41 457 36 480 8.29e-44 161
Msa1128780 AT2G16120.1 26.483 472 310 8 38 476 37 504 2.92e-43 160
Msa1128780 AT4G36670.1 26.991 452 297 8 38 458 28 477 3.41e-43 159
Msa1128780 AT2G16130.1 26.652 469 306 8 38 473 37 500 4.06e-43 160
Msa1128780 AT1G67300.6 31.026 390 243 9 32 406 56 434 1.47e-41 154
Msa1128780 AT1G67300.7 31.026 390 243 9 32 406 56 434 1.47e-41 154
Msa1128780 AT1G67300.4 30.809 383 239 9 32 399 56 427 7.61e-39 146
Msa1128780 AT1G67300.5 30.809 383 239 9 32 399 56 427 7.61e-39 146
Msa1128780 AT5G26340.1 26.511 513 316 11 24 481 20 526 4.69e-38 146
Msa1128780 AT5G26250.1 28.325 406 276 6 67 460 81 483 7.93e-38 145
Msa1128780 AT1G11260.1 26.059 472 304 9 24 456 20 485 9.82e-38 145
Msa1128780 AT1G79820.4 30.390 385 240 8 38 407 65 436 9.92e-38 144
Msa1128780 AT3G05960.1 28.186 408 274 8 67 460 80 482 1.17e-35 139
Msa1128780 AT4G21480.1 27.764 407 273 7 67 457 83 484 4.27e-35 137
Msa1128780 AT1G77210.2 27.475 404 275 8 67 456 86 485 9.85e-35 136
Msa1128780 AT1G77210.1 27.475 404 275 8 67 456 86 485 9.85e-35 136
Msa1128780 AT1G50310.1 25.369 406 283 7 67 456 85 486 3.24e-34 135
Msa1128780 AT4G02050.2 25.370 473 315 8 17 456 17 484 1.46e-33 133
Msa1128780 AT4G02050.1 25.370 473 315 8 17 456 17 484 1.46e-33 133
Msa1128780 AT3G19940.1 25.248 404 285 7 67 456 85 485 3.63e-33 132
Msa1128780 AT5G23270.1 26.087 414 270 9 67 456 85 486 1.09e-31 127
Msa1128780 AT2G35740.1 29.268 287 179 6 71 336 73 356 1.26e-31 128
Msa1128780 AT2G35740.1 36.893 103 64 1 360 461 458 560 1.73e-12 70.1
Msa1128780 AT1G79820.3 28.211 436 242 10 38 460 65 442 1.44e-31 126
Msa1128780 AT5G61520.2 26.500 400 279 7 69 456 43 439 5.27e-31 125
Msa1128780 AT3G19930.1 25.490 408 282 8 67 457 82 484 7.92e-31 125
Msa1128780 AT3G19930.2 25.490 408 282 8 67 457 82 484 7.92e-31 125
Msa1128780 AT1G30220.1 29.603 277 180 5 89 351 93 368 8.21e-31 125
Msa1128780 AT1G30220.1 36.893 103 64 1 360 461 455 557 7.33e-13 71.2
Msa1128780 AT5G61520.1 26.500 400 279 7 69 456 91 487 1.24e-30 124
Msa1128780 AT5G17010.2 27.681 401 207 9 76 459 104 438 1.49e-30 123
Msa1128780 AT1G34580.2 26.316 399 275 6 69 450 35 431 1.71e-29 120
Msa1128780 AT1G34580.1 25.926 405 281 6 69 456 85 487 1.99e-29 121
Msa1128780 AT4G16480.2 25.824 364 238 7 24 358 24 384 2.11e-29 122
Msa1128780 AT4G16480.2 35.922 103 65 1 360 461 459 561 1.47e-12 70.5
Msa1128780 AT4G16480.3 25.824 364 238 7 24 358 24 384 2.11e-29 122
Msa1128780 AT4G16480.3 35.922 103 65 1 360 461 459 561 1.47e-12 70.5
Msa1128780 AT4G16480.1 25.824 364 238 7 24 358 24 384 2.11e-29 122
Msa1128780 AT4G16480.1 35.922 103 65 1 360 461 459 561 1.47e-12 70.5
Msa1128780 AT1G07340.1 26.446 484 306 12 14 456 7 481 3.54e-29 120
Msa1128780 AT1G77210.3 27.928 333 222 8 138 456 8 336 1.42e-28 116
Msa1128780 AT1G50310.2 24.251 334 233 7 139 456 14 343 6.54e-26 109
Msa1128780 AT1G79820.5 26.685 356 184 8 120 460 87 380 3.20e-24 104
Msa1128780 AT4G35300.5 33.810 210 118 4 261 454 319 523 6.97e-22 99.0
Msa1128780 AT4G35300.9 33.810 210 118 4 261 454 506 710 1.33e-21 99.0
Msa1128780 AT4G35300.9 36.364 165 97 4 75 232 54 217 5.86e-17 84.3
Msa1128780 AT4G35300.2 33.810 210 118 4 261 454 506 710 1.33e-21 99.0
Msa1128780 AT4G35300.2 36.364 165 97 4 75 232 54 217 5.86e-17 84.3
Msa1128780 AT4G35300.3 33.810 210 118 4 261 454 506 710 1.33e-21 99.0
Msa1128780 AT4G35300.3 36.364 165 97 4 75 232 54 217 5.86e-17 84.3
Msa1128780 AT4G35300.4 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1128780 AT4G35300.4 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1128780 AT4G35300.8 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1128780 AT4G35300.8 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1128780 AT4G35300.6 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1128780 AT4G35300.6 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1128780 AT4G35300.11 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1128780 AT4G35300.11 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1128780 AT4G35300.1 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1128780 AT4G35300.1 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1128780 AT4G35300.10 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1128780 AT4G35300.10 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1128780 AT4G35300.7 33.810 210 118 4 261 454 516 720 1.38e-21 98.6
Msa1128780 AT4G35300.7 36.364 165 97 4 75 232 54 217 5.37e-17 84.3
Msa1128780 AT3G51490.3 32.093 215 115 5 261 454 460 664 4.14e-21 97.1
Msa1128780 AT3G51490.3 34.545 165 100 3 75 232 4 167 4.23e-18 87.8
Msa1128780 AT3G51490.2 32.093 215 115 5 261 454 510 714 4.49e-21 97.1
Msa1128780 AT3G51490.2 34.545 165 100 3 75 232 54 217 5.59e-18 87.4
Msa1128780 AT1G20840.2 29.437 231 155 3 29 252 6 235 4.19e-20 94.4
Msa1128780 AT1G20840.2 31.731 208 125 3 261 454 509 713 7.81e-19 90.1
Msa1128780 AT1G20840.1 29.437 231 155 3 29 252 6 235 4.19e-20 94.4
Msa1128780 AT1G20840.1 31.731 208 125 3 261 454 509 713 7.81e-19 90.1
Msa1128780 AT1G54730.1 66.129 62 21 0 78 139 1 62 9.65e-20 83.6
Msa1128780 AT3G51490.1 33.645 214 105 6 261 454 510 706 1.33e-18 89.4
Msa1128780 AT3G51490.1 34.545 165 100 3 75 232 54 217 4.81e-18 87.8
Msa1128780 AT5G43340.1 22.697 445 268 15 76 462 81 507 1.42e-11 67.0

Find 139 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAGATACACAGATGCTTTA+AGG 0.115007 7_3:+80678084 None:intergenic
GTATCACTAACTTATCTTAT+TGG 0.226585 7_3:-80676492 Msa1128780:CDS
TTGTTCACTGGTTGTGTTCT+TGG 0.226899 7_3:-80674323 Msa1128780:CDS
GTTATTTCAGCTATATAAAT+TGG 0.231757 7_3:+80676728 None:intergenic
TGCTATTGTTCCAATACTTC+TGG 0.234236 7_3:+80675297 None:intergenic
TGACAGCTAATGATTTGTTT+TGG 0.245772 7_3:-80676516 Msa1128780:intron
TAAATACTATGAATAGAATA+AGG 0.249084 7_3:-80673786 Msa1128780:three_prime_UTR
TATGCATGCAATTCTGTTAC+AGG 0.251586 7_3:+80673954 None:intergenic
ATATGCAGGACTTGCATAAA+TGG 0.275987 7_3:-80674841 Msa1128780:intron
TTGTGAATGAAAACAGAATA+TGG 0.285794 7_3:+80673857 None:intergenic
ATTCTTCAATTGGAGGCTTT+TGG 0.312549 7_3:-80676466 Msa1128780:CDS
TTGTTGGATACTGTCTGATA+TGG 0.318096 7_3:+80673999 None:intergenic
CCATTTCTTAAAATATTACT+TGG 0.321078 7_3:+80673925 None:intergenic
AATAGCAATGGTTGTTGTTC+AGG 0.339658 7_3:-80675281 Msa1128780:intron
TGCCAAATTCATCTCTTTGT+TGG 0.339996 7_3:+80673983 None:intergenic
ATCCAACAAAGAGATGAATT+TGG 0.340305 7_3:-80673985 Msa1128780:CDS
TATGTTGGAAGACTATTGTT+AGG 0.345071 7_3:-80676881 Msa1128780:CDS
GAAGGAATTCAGTCCCATTC+TGG 0.348944 7_3:-80674819 Msa1128780:CDS
TCCGAGCTATGTTGCATCTT+GGG 0.361851 7_3:-80677144 Msa1128780:CDS
CAAACTGTTGTAGTATTATC+AGG 0.367972 7_3:+80675618 None:intergenic
CTCCGAGCTATGTTGCATCT+TGG 0.368885 7_3:-80677145 Msa1128780:CDS
ACCACCCTTGCTGCTGTCTC+TGG 0.374172 7_3:-80677941 Msa1128780:CDS
ATAGATCCCAATGACAGCTT+TGG 0.374563 7_3:-80675129 Msa1128780:intron
AGCAGAACCCTTCACATTGA+TGG 0.376678 7_3:+80674362 None:intergenic
TTTGGTTCAATACTAACAAT+TGG 0.384921 7_3:-80677331 Msa1128780:CDS
CCTAGGAGACTCGGGAATAA+AGG 0.388063 7_3:+80676312 None:intergenic
AATCCACTTTACAGCACCTT+AGG 0.388303 7_3:-80675957 Msa1128780:CDS
TTATTGGAGCATTCTTCAAT+TGG 0.391490 7_3:-80676476 Msa1128780:CDS
ATTACTCCCAAAGCTGTCAT+TGG 0.396470 7_3:+80675122 None:intergenic
TTCTTCTAGCGTACGCCCCT+TGG 0.400544 7_3:+80674040 None:intergenic
CAACAGTTTGGCGGAGTTAA+CGG 0.405022 7_3:-80675605 Msa1128780:CDS
TAAAATGAAGTGAAATGAAA+AGG 0.405480 7_3:+80678151 None:intergenic
TAGATCCCAATGACAGCTTT+GGG 0.408715 7_3:-80675128 Msa1128780:CDS
AAATGAGTGTATATGATTGC+GGG 0.408976 7_3:+80678194 None:intergenic
GGATTGGTGTAGAAAGGTTC+AGG 0.412366 7_3:-80673894 Msa1128780:three_prime_UTR
GCAGGCAAAGGTTGGTCGCT+TGG 0.414342 7_3:-80675989 Msa1128780:intron
TATTCATCCCCTGCTCAATC+TGG 0.419875 7_3:-80677785 Msa1128780:CDS
TCTGGCACTCGTCGGTGTAC+TGG 0.423682 7_3:-80674801 Msa1128780:intron
CATAATAATCAGGTATATAC+AGG 0.427901 7_3:-80674530 Msa1128780:intron
AGTTCTATATTTGTCTCTGC+TGG 0.432640 7_3:-80675566 Msa1128780:intron
GAGATTCACTGCAGTTCATC+AGG 0.433725 7_3:-80676687 Msa1128780:intron
GAATCTCCCTCGAAGATCCT+TGG 0.434230 7_3:+80676703 None:intergenic
TTGGAGCATTCTTCAATTGG+AGG 0.438236 7_3:-80676473 Msa1128780:CDS
GCTTTAAGGTTATGAAGAGT+AGG 0.438635 7_3:+80678098 None:intergenic
ATCACAGATGACCTTGATCT+TGG 0.439414 7_3:-80677761 Msa1128780:CDS
GCTTTGTTACATTTGTTCAC+TGG 0.446450 7_3:-80674335 Msa1128780:CDS
AGCGTACGCCCCTTGGTCTC+TGG 0.452619 7_3:+80674047 None:intergenic
CCTTTATTCCCGAGTCTCCT+AGG 0.455469 7_3:-80676312 Msa1128780:CDS
ATCAATGTGAAGGGTTCTGC+TGG 0.456001 7_3:-80674360 Msa1128780:CDS
AATCTCCCTCGAAGATCCTT+GGG 0.474385 7_3:+80676704 None:intergenic
AAAATGAAGTGAAATGAAAA+GGG 0.477551 7_3:+80678152 None:intergenic
CATTCGCGAAGAAGCTAGTT+CGG 0.477966 7_3:-80677987 Msa1128780:CDS
ATTAGTGAAGACGCCAGCTT+GGG 0.478480 7_3:-80678336 None:intergenic
TAATCTGAAACGATTGGCAT+TGG 0.480734 7_3:+80678250 None:intergenic
ATCCACTTTACAGCACCTTA+GGG 0.481918 7_3:-80675956 Msa1128780:CDS
TCCCGAGTCTCCTAGGTGGC+TGG 0.483351 7_3:-80676305 Msa1128780:intron
TTCATATTCTCTAGCATCTG+TGG 0.483621 7_3:-80674101 Msa1128780:CDS
CTGATAATACTACAACAGTT+TGG 0.484038 7_3:-80675617 Msa1128780:CDS
TCCCCTAAGGTGCTGTAAAG+TGG 0.493199 7_3:+80675954 None:intergenic
TTACTCCCAAAGCTGTCATT+GGG 0.497965 7_3:+80675123 None:intergenic
TCTGCATCAGGAACATGCTT+AGG 0.498862 7_3:-80674982 Msa1128780:CDS
CTCATGAGTTGGAATTCAGC+AGG 0.499619 7_3:-80674276 Msa1128780:intron
CACCAGCCACCTAGGAGACT+CGG 0.501397 7_3:+80676303 None:intergenic
TCACATTGTTAGGTAGGAGT+TGG 0.508953 7_3:-80675641 Msa1128780:intron
AAATACTATGAATAGAATAA+GGG 0.508959 7_3:-80673785 Msa1128780:three_prime_UTR
ATTATACAGATCTCTGCATC+AGG 0.511602 7_3:-80674994 Msa1128780:intron
AAAATGAGTGTATATGATTG+CGG 0.511891 7_3:+80678193 None:intergenic
AGCTATGTTGCATCTTGGGA+TGG 0.514867 7_3:-80677140 Msa1128780:CDS
GAATAGCACCATGCTCGAAA+AGG 0.516455 7_3:-80673829 Msa1128780:three_prime_UTR
TTTGTTTGAAGGTTGCTTGG+TGG 0.518629 7_3:-80676907 Msa1128780:intron
GAATGTTGATATTTCTGAAG+AGG 0.522673 7_3:-80675929 Msa1128780:CDS
GATATTTCCCATCAATGTGA+AGG 0.523629 7_3:-80674370 Msa1128780:CDS
AGGATCTTTCTCACTTGGCA+TGG 0.525035 7_3:-80674510 Msa1128780:CDS
TATCAACATTCTTTCCCCTA+AGG 0.526789 7_3:+80675941 None:intergenic
CCTCGGCTACGCCAAGATCA+AGG 0.526814 7_3:+80677750 None:intergenic
CTATTGTTAGGATGTGGAAT+GGG 0.527075 7_3:-80676869 Msa1128780:CDS
TTGGCATGGGAGGAATACCC+TGG 0.527653 7_3:-80674496 Msa1128780:CDS
GCAGAACCCTTCACATTGAT+GGG 0.528455 7_3:+80674363 None:intergenic
TATGATGGATTGGTGTAGAA+AGG 0.529116 7_3:-80673900 Msa1128780:three_prime_UTR
AGAAATGGTATATGATGGAT+TGG 0.531956 7_3:-80673910 Msa1128780:three_prime_UTR
GTTGCTTGGTGGCTTTATGT+TGG 0.534213 7_3:-80676896 Msa1128780:CDS
TATACAGGATCTTTCTCACT+TGG 0.535412 7_3:-80674515 Msa1128780:CDS
AATTTGATGTTATAGGCCAT+GGG 0.537100 7_3:-80677171 Msa1128780:intron
TCTTTCTCACTTGGCATGGG+AGG 0.540414 7_3:-80674506 Msa1128780:CDS
CTCAGAAGCTGTGCAAGACA+TGG 0.541760 7_3:+80676340 None:intergenic
GGATCTTTCTCACTTGGCAT+GGG 0.542222 7_3:-80674509 Msa1128780:CDS
CAAAGGTTGGTCGCTTGGAA+AGG 0.543452 7_3:-80675984 Msa1128780:CDS
AACGTTAAGAGCTCCCAAGC+TGG 0.545488 7_3:+80678323 None:intergenic
ATTGTTCTGCAGGCAAAGGT+TGG 0.546143 7_3:-80675997 Msa1128780:intron
TCCCAAGATGCAACATAGCT+CGG 0.546662 7_3:+80677143 None:intergenic
CGAACTAGCTTCTTCGCGAA+TGG 0.550047 7_3:+80677988 None:intergenic
GATTAGTGAAGACGCCAGCT+TGG 0.550708 7_3:-80678337 None:intergenic
ACCAGAGACAGCAGCAAGGG+TGG 0.550981 7_3:+80677940 None:intergenic
ACTATTGTTAGGATGTGGAA+TGG 0.552813 7_3:-80676870 Msa1128780:CDS
ACACCGACGAGTGCCAGAAT+GGG 0.557562 7_3:+80674806 None:intergenic
AGAACCAGAGACAGCAGCAA+GGG 0.561286 7_3:+80677937 None:intergenic
TCTGTGATTCCAGATTGAGC+AGG 0.562147 7_3:+80677776 None:intergenic
TGCTAAACTACCACTTACAA+TGG 0.563786 7_3:+80677294 None:intergenic
CCTTGATCTTGGCGTAGCCG+AGG 0.564032 7_3:-80677750 Msa1128780:intron
AATACTAACAATTGGAGCGA+TGG 0.564654 7_3:-80677323 Msa1128780:CDS
CTAACAATTGGAGCGATGGT+TGG 0.566895 7_3:-80677319 Msa1128780:CDS
TGCTCTCAGATCAACCGCTA+GGG 0.574288 7_3:+80673759 None:intergenic
GCTTGCCATTGCAGTCTCAA+AGG 0.575081 7_3:-80677118 Msa1128780:intron
GGTAGTTTAGCAGATTATGC+AGG 0.575653 7_3:-80677283 Msa1128780:CDS
ATTACATACTCTAATTTCAG+TGG 0.575662 7_3:+80675906 None:intergenic
GGAAGACTATTGTTAGGATG+TGG 0.575864 7_3:-80676875 Msa1128780:CDS
CTGTGATTCCAGATTGAGCA+GGG 0.578238 7_3:+80677777 None:intergenic
AGCTTCTGTTTGCTGCTGAG+AGG 0.578800 7_3:+80675774 None:intergenic
ACCAGCCACCTAGGAGACTC+GGG 0.581675 7_3:+80676304 None:intergenic
GCAGGACTTGCATAAATGGA+AGG 0.583428 7_3:-80674837 Msa1128780:intron
AATGGGTATTCTATCATATG+TGG 0.590029 7_3:-80676852 Msa1128780:intron
ACCTCAGACATTATAACCCA+GGG 0.595175 7_3:+80674479 None:intergenic
ATATTTCCCATCAATGTGAA+GGG 0.595917 7_3:-80674369 Msa1128780:CDS
ATAATACTACAACAGTTTGG+CGG 0.603039 7_3:-80675614 Msa1128780:CDS
ATAACACCCAAGGATCTTCG+AGG 0.605899 7_3:-80676710 Msa1128780:CDS
ATGGTTGGTGCCATTGTAAG+TGG 0.607976 7_3:-80677304 Msa1128780:CDS
TACCTCAGACATTATAACCC+AGG 0.616486 7_3:+80674478 None:intergenic
GTAAGTATAAGAATACTAGT+TGG 0.617323 7_3:+80677962 None:intergenic
AGTCCCATTCTGGCACTCGT+CGG 0.621294 7_3:-80674809 Msa1128780:CDS
GAACAACTCACCAGCCACCT+AGG 0.622122 7_3:+80676295 None:intergenic
AACTAGTACCAGAGACCAAG+GGG 0.634126 7_3:-80674055 Msa1128780:CDS
CTGCTGAATTCCAACTCATG+AGG 0.635484 7_3:+80674277 None:intergenic
TATAGCTGAAATAACACCCA+AGG 0.637527 7_3:-80676720 Msa1128780:CDS
ACATAGCTCGGAGAATCCCA+TGG 0.638278 7_3:+80677155 None:intergenic
ATTATGTAATCTGAAACGAT+TGG 0.639796 7_3:+80678244 None:intergenic
AAGTATTGGAACAATAGCAA+TGG 0.641668 7_3:-80675293 Msa1128780:CDS
AGTTACCTTTGAGACTGCAA+TGG 0.641960 7_3:+80677113 None:intergenic
AAAACTAGTACCAGAGACCA+AGG 0.643814 7_3:-80674057 Msa1128780:CDS
AAAAGAATGACAGAGATACA+AGG 0.644048 7_3:+80674953 None:intergenic
AAGAACCAGAGACAGCAGCA+AGG 0.646758 7_3:+80677936 None:intergenic
ACCCTGGGTTATAATGTCTG+AGG 0.647294 7_3:-80674480 Msa1128780:intron
TGGCATGGGAGGAATACCCT+GGG 0.647522 7_3:-80674495 Msa1128780:CDS
AAACTAGTACCAGAGACCAA+GGG 0.649846 7_3:-80674056 Msa1128780:CDS
TTGCTACAAATAGAATGGTG+AGG 0.651966 7_3:+80674078 None:intergenic
TCCACTTTACAGCACCTTAG+GGG 0.658562 7_3:-80675955 Msa1128780:CDS
TAACACCCAAGGATCTTCGA+GGG 0.664630 7_3:-80676709 Msa1128780:CDS
TAGAATAAGGGTATCCCTAG+CGG 0.689521 7_3:-80673773 Msa1128780:three_prime_UTR
TTATTCCCGAGTCTCCTAGG+TGG 0.689625 7_3:-80676309 Msa1128780:CDS
TGTGATTCCAGATTGAGCAG+GGG 0.720230 7_3:+80677778 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTATTAAATATGGAAA+TGG + chr7_3:80674913-80674932 None:intergenic 10.0%
!! GTACTCAAATTTATTAAATA+TGG + chr7_3:80674919-80674938 None:intergenic 15.0%
!! TTAATAAATTTGAGTACATT+AGG - chr7_3:80674922-80674941 Msa1128780:intron 15.0%
!! AATTGCGTTAAATATTATAA+AGG - chr7_3:80675330-80675349 Msa1128780:intron 15.0%
!! ATTGCGTTAAATATTATAAA+GGG - chr7_3:80675331-80675350 Msa1128780:intron 15.0%
!!! GATTTTTATTTCTTTATTTC+AGG - chr7_3:80675618-80675637 Msa1128780:CDS 15.0%
!! ATAATGATTTGAAAAAATAG+AGG - chr7_3:80675881-80675900 Msa1128780:intron 15.0%
!!! TAAAAATATGTTACACTTTT+AGG + chr7_3:80676163-80676182 None:intergenic 15.0%
!!! TTAATGTATTATTTTTTACC+AGG - chr7_3:80677857-80677876 Msa1128780:intron 15.0%
!! TAAATACTATGAATAGAATA+AGG - chr7_3:80678202-80678221 Msa1128780:five_prime_UTR 15.0%
!! AAATACTATGAATAGAATAA+GGG - chr7_3:80678203-80678222 Msa1128780:five_prime_UTR 15.0%
!! AAAATGAAGTGAAATGAAAA+GGG + chr7_3:80673839-80673858 None:intergenic 20.0%
!! TAAAATGAAGTGAAATGAAA+AGG + chr7_3:80673840-80673859 None:intergenic 20.0%
!!! TTCTCATTTACATCATTTTT+TGG - chr7_3:80674097-80674116 Msa1128780:CDS 20.0%
!! AACTTATTTATCGATATTGT+TGG - chr7_3:80674296-80674315 Msa1128780:CDS 20.0%
!!! ACTTATTTGAGTTTATCTAT+AGG - chr7_3:80674364-80674383 Msa1128780:CDS 20.0%
!! TTCTTTCAATTTGATGTTAT+AGG - chr7_3:80674810-80674829 Msa1128780:CDS 20.0%
!! TATAAATTGGTACCTAAAAT+GGG + chr7_3:80675250-80675269 None:intergenic 20.0%
!! ATATAAATTGGTACCTAAAA+TGG + chr7_3:80675251-80675270 None:intergenic 20.0%
!!! GTTATTTCAGCTATATAAAT+TGG + chr7_3:80675263-80675282 None:intergenic 20.0%
!! GCTTACTTTAAATCTTTATT+TGG - chr7_3:80675441-80675460 Msa1128780:intron 20.0%
!!! TTTATACACTTACTTTTTGT+AGG - chr7_3:80676179-80676198 Msa1128780:intron 20.0%
!! TAAAAATATGCAGATTCTTA+TGG - chr7_3:80676317-80676336 Msa1128780:CDS 20.0%
!! AATAGAATTATTAATTCTGC+TGG + chr7_3:80676519-80676538 None:intergenic 20.0%
!!! CTATTTTCTCAAATTATTAC+TGG - chr7_3:80676534-80676553 Msa1128780:intron 20.0%
!! ATCTTATTCATCATATTAAG+AGG + chr7_3:80676769-80676788 None:intergenic 20.0%
!!! AACTTTCTCTATTTTAAATG+TGG - chr7_3:80677291-80677310 Msa1128780:CDS 20.0%
!! ATTTCATGAATGCAAATATA+AGG + chr7_3:80677361-80677380 None:intergenic 20.0%
!! TGATTATTATGGTAACTAAA+TGG + chr7_3:80677449-80677468 None:intergenic 20.0%
!! ATTTAGTTACCATAATAATC+AGG - chr7_3:80677448-80677467 Msa1128780:intron 20.0%
!!! ATTTTTTGTTTTCTTCTAGA+GGG + chr7_3:80677760-80677779 None:intergenic 20.0%
!! TCTAGAAGAAAACAAAAAAT+CGG - chr7_3:80677760-80677779 Msa1128780:CDS 20.0%
!! CCATTTCTTAAAATATTACT+TGG + chr7_3:80678066-80678085 None:intergenic 20.0%
!!! CCAAGTAATATTTTAAGAAA+TGG - chr7_3:80678063-80678082 Msa1128780:five_prime_UTR 20.0%
!!! TTTTAAGAAATGGTATATGA+TGG - chr7_3:80678073-80678092 Msa1128780:five_prime_UTR 20.0%
!! ATTATGTAATCTGAAACGAT+TGG + chr7_3:80673747-80673766 None:intergenic 25.0%
! AAAATGAGTGTATATGATTG+CGG + chr7_3:80673798-80673817 None:intergenic 25.0%
! GTAAGTATAAGAATACTAGT+TGG + chr7_3:80674029-80674048 None:intergenic 25.0%
!!! TCATTTACATCATTTTTTGG+AGG - chr7_3:80674100-80674119 Msa1128780:CDS 25.0%
!!! TTTATGCAGTATTCACTTTT+TGG - chr7_3:80674639-80674658 Msa1128780:intron 25.0%
!! TTTGGTTCAATACTAACAAT+TGG - chr7_3:80674657-80674676 Msa1128780:intron 25.0%
! ATAGTTGAAATAGACAGAAT+TGG + chr7_3:80674751-80674770 None:intergenic 25.0%
! ACATTAGGACCTATAATAAA+TGG - chr7_3:80674937-80674956 Msa1128780:intron 25.0%
! TACAACCTTCCATTTATTAT+AGG + chr7_3:80674949-80674968 None:intergenic 25.0%
!!! TTTGGTTGATTTTTGTTTGA+AGG - chr7_3:80675070-80675089 Msa1128780:intron 25.0%
! AGGGTCAATAGTTTAAATTA+CGG - chr7_3:80675350-80675369 Msa1128780:intron 25.0%
! AATAGTTTAAATTACGGTTG+CGG - chr7_3:80675356-80675375 Msa1128780:intron 25.0%
!! TCAGAACTTTTATATTGATG+TGG - chr7_3:80675379-80675398 Msa1128780:intron 25.0%
! GTATCACTAACTTATCTTAT+TGG - chr7_3:80675496-80675515 Msa1128780:intron 25.0%
!!! CATCATTTTTGTCAAATTGT+AGG - chr7_3:80675787-80675806 Msa1128780:CDS 25.0%
! ATTACATACTCTAATTTCAG+TGG + chr7_3:80676085-80676104 None:intergenic 25.0%
!! AAACAGAAGCTAACATTTTT+GGG - chr7_3:80676226-80676245 Msa1128780:intron 25.0%
! TAAGATAAGATGCATGAATT+GGG + chr7_3:80676299-80676318 None:intergenic 25.0%
! TTAAGATAAGATGCATGAAT+TGG + chr7_3:80676300-80676319 None:intergenic 25.0%
! TATTACATGATTCTCATGAA+AGG - chr7_3:80676641-80676660 Msa1128780:intron 25.0%
! ATTACATGATTCTCATGAAA+GGG - chr7_3:80676642-80676661 Msa1128780:intron 25.0%
! TATGATGAATAAGATGAGAT+AGG - chr7_3:80676774-80676793 Msa1128780:intron 25.0%
!!! GTAATTTTGATGGATAAATC+TGG - chr7_3:80676884-80676903 Msa1128780:CDS 25.0%
!! TAATCGTTTTACCAGTAAAA+GGG + chr7_3:80676918-80676937 None:intergenic 25.0%
!! TTAATCGTTTTACCAGTAAA+AGG + chr7_3:80676919-80676938 None:intergenic 25.0%
! ATTTACAGAATAGCATGAAA+AGG + chr7_3:80676955-80676974 None:intergenic 25.0%
!!! AAATCAGAGAAAGTATTAGT+AGG + chr7_3:80677330-80677349 None:intergenic 25.0%
!! TGGTAAAGTTAAAAGGTATA+TGG - chr7_3:80677408-80677427 Msa1128780:intron 25.0%
! CTGTATATACCTGATTATTA+TGG + chr7_3:80677460-80677479 None:intergenic 25.0%
! CATAATAATCAGGTATATAC+AGG - chr7_3:80677458-80677477 Msa1128780:intron 25.0%
!!! GATTTTTTGTTTTCTTCTAG+AGG + chr7_3:80677761-80677780 None:intergenic 25.0%
! AAGAAAACAAAAAATCGGAA+AGG - chr7_3:80677765-80677784 Msa1128780:CDS 25.0%
!!! TAGTTTTGCTACAAATAGAA+TGG + chr7_3:80677918-80677937 None:intergenic 25.0%
! TTGTGAATGAAAACAGAATA+TGG + chr7_3:80678134-80678153 None:intergenic 25.0%
AAATGAGTGTATATGATTGC+GGG + chr7_3:80673797-80673816 None:intergenic 30.0%
TAAGATACACAGATGCTTTA+AGG + chr7_3:80673907-80673926 None:intergenic 30.0%
TTCAAAGAAAGTTCAAACCT+CGG + chr7_3:80674258-80674277 None:intergenic 30.0%
!! TAGTTTGACTTAGTTCTGTT+TGG + chr7_3:80674613-80674632 None:intergenic 30.0%
AATTTGATGTTATAGGCCAT+GGG - chr7_3:80674817-80674836 Msa1128780:CDS 30.0%
TAGGACCTATAATAAATGGA+AGG - chr7_3:80674941-80674960 Msa1128780:intron 30.0%
TAAGAAAGAATTCCCAAAAC+TGG + chr7_3:80675025-80675044 None:intergenic 30.0%
!! ATTTTTGTTTGAAGGTTGCT+TGG - chr7_3:80675078-80675097 Msa1128780:intron 30.0%
TATGTTGGAAGACTATTGTT+AGG - chr7_3:80675107-80675126 Msa1128780:CDS 30.0%
AATGGGTATTCTATCATATG+TGG - chr7_3:80675136-80675155 Msa1128780:intron 30.0%
!!! TGACAGCTAATGATTTGTTT+TGG - chr7_3:80675472-80675491 Msa1128780:intron 30.0%
!!! GACAGCTAATGATTTGTTTT+GGG - chr7_3:80675473-80675492 Msa1128780:intron 30.0%
!!! ACAGCTAATGATTTGTTTTG+GGG - chr7_3:80675474-80675493 Msa1128780:intron 30.0%
! TTATTGGAGCATTCTTCAAT+TGG - chr7_3:80675512-80675531 Msa1128780:intron 30.0%
ATAGGTAAAGATGTTCTTTC+TGG - chr7_3:80675550-80675569 Msa1128780:intron 30.0%
ATTGTTTGTGCTAATTGTGT+TGG - chr7_3:80675734-80675753 Msa1128780:CDS 30.0%
! GAATGTTGATATTTCTGAAG+AGG - chr7_3:80676059-80676078 Msa1128780:intron 30.0%
! CAAACAGAAGCTAACATTTT+TGG - chr7_3:80676225-80676244 Msa1128780:intron 30.0%
TGGTATTTAGTCACATTGTT+AGG - chr7_3:80676337-80676356 Msa1128780:CDS 30.0%
ATTTAGTCACATTGTTAGGT+AGG - chr7_3:80676341-80676360 Msa1128780:CDS 30.0%
CAAACTGTTGTAGTATTATC+AGG + chr7_3:80676373-80676392 None:intergenic 30.0%
CTGATAATACTACAACAGTT+TGG - chr7_3:80676371-80676390 Msa1128780:intron 30.0%
ATAATACTACAACAGTTTGG+CGG - chr7_3:80676374-80676393 Msa1128780:intron 30.0%
TAGCATATGACATGTAAAGA+AGG - chr7_3:80676593-80676612 Msa1128780:intron 30.0%
GAAAATTCTTATCCATCACA+GGG - chr7_3:80676664-80676683 Msa1128780:intron 30.0%
!! AAGTATTGGAACAATAGCAA+TGG - chr7_3:80676695-80676714 Msa1128780:CDS 30.0%
AAATTACTGAACAGTGTGAA+GGG + chr7_3:80676831-80676850 None:intergenic 30.0%
! AATCGTTTTACCAGTAAAAG+GGG + chr7_3:80676917-80676936 None:intergenic 30.0%
AAAAGAATGACAGAGATACA+AGG + chr7_3:80677038-80677057 None:intergenic 30.0%
! ATTGTTTTCTTCCAATATGC+AGG - chr7_3:80677133-80677152 Msa1128780:CDS 30.0%
!! GACTTATAAATCGGTTTTGT+AGG + chr7_3:80677250-80677269 None:intergenic 30.0%
CATGAATGCAAATATAAGGT+TGG + chr7_3:80677357-80677376 None:intergenic 30.0%
TTGCATTCATGAAATAGACT+TGG - chr7_3:80677366-80677385 Msa1128780:intron 30.0%
ATGATTATCTAGTCAAGATG+AGG + chr7_3:80677587-80677606 None:intergenic 30.0%
ATATTTCCCATCAATGTGAA+GGG - chr7_3:80677619-80677638 Msa1128780:intron 30.0%
TGAATGAAGTCTTGAAAAGT+AGG - chr7_3:80677801-80677820 Msa1128780:intron 30.0%
GAATGAAGTCTTGAAAAGTA+GGG - chr7_3:80677802-80677821 Msa1128780:intron 30.0%
ATCCAACAAAGAGATGAATT+TGG - chr7_3:80678003-80678022 Msa1128780:CDS 30.0%
!! AGAAATGGTATATGATGGAT+TGG - chr7_3:80678078-80678097 Msa1128780:five_prime_UTR 30.0%
! TAATCTGAAACGATTGGCAT+TGG + chr7_3:80673741-80673760 None:intergenic 35.0%
!! GCTTTAAGGTTATGAAGAGT+AGG + chr7_3:80673893-80673912 None:intergenic 35.0%
!!! GTCTCTGGTTCTTATGTTTT+TGG - chr7_3:80674062-80674081 Msa1128780:CDS 35.0%
!!! TTCTTATGTTTTTGGCTCTG+CGG - chr7_3:80674070-80674089 Msa1128780:CDS 35.0%
!! ATTGTTGGCTTTAGTTGACT+TGG - chr7_3:80674311-80674330 Msa1128780:CDS 35.0%
AATACTAACAATTGGAGCGA+TGG - chr7_3:80674665-80674684 Msa1128780:intron 35.0%
TGCTAAACTACCACTTACAA+TGG + chr7_3:80674697-80674716 None:intergenic 35.0%
GACAGAATTGGAGAAACTTA+CGG + chr7_3:80674739-80674758 None:intergenic 35.0%
CAATTTGATGTTATAGGCCA+TGG - chr7_3:80674816-80674835 Msa1128780:CDS 35.0%
TGGACAGAATTGAAGAAACA+CGG + chr7_3:80675005-80675024 None:intergenic 35.0%
! TCTTCAATTCTGTCCAGTTT+TGG - chr7_3:80675009-80675028 Msa1128780:intron 35.0%
! CTTCAATTCTGTCCAGTTTT+GGG - chr7_3:80675010-80675029 Msa1128780:intron 35.0%
!! GTAGTTGCTATTTGATGGTT+TGG - chr7_3:80675052-80675071 Msa1128780:intron 35.0%
ACTATTGTTAGGATGTGGAA+TGG - chr7_3:80675118-80675137 Msa1128780:CDS 35.0%
CTATTGTTAGGATGTGGAAT+GGG - chr7_3:80675119-80675138 Msa1128780:CDS 35.0%
TCCCAAGAAATGCAACAAAT+AGG - chr7_3:80675214-80675233 Msa1128780:intron 35.0%
! GCCTATTTGTTGCATTTCTT+GGG + chr7_3:80675218-80675237 None:intergenic 35.0%
! TGCCTATTTGTTGCATTTCT+TGG + chr7_3:80675219-80675238 None:intergenic 35.0%
TATAGCTGAAATAACACCCA+AGG - chr7_3:80675268-80675287 Msa1128780:intron 35.0%
TATTGATGTGGTCAGAAATG+CGG - chr7_3:80675391-80675410 Msa1128780:intron 35.0%
! ATTCTTCAATTGGAGGCTTT+TGG - chr7_3:80675522-80675541 Msa1128780:intron 35.0%
TATCAACATTCTTTCCCCTA+AGG + chr7_3:80676050-80676069 None:intergenic 35.0%
!! TTCATTAGAGTGTTGACTTG+TGG - chr7_3:80676114-80676133 Msa1128780:intron 35.0%
!! TCATTAGAGTGTTGACTTGT+GGG - chr7_3:80676115-80676134 Msa1128780:intron 35.0%
AGTTCTATATTTGTCTCTGC+TGG - chr7_3:80676422-80676441 Msa1128780:intron 35.0%
GGAAAATTCTTATCCATCAC+AGG - chr7_3:80676663-80676682 Msa1128780:intron 35.0%
TGCTATTGTTCCAATACTTC+TGG + chr7_3:80676694-80676713 None:intergenic 35.0%
! AATAGCAATGGTTGTTGTTC+AGG - chr7_3:80676707-80676726 Msa1128780:CDS 35.0%
AATTACTGAACAGTGTGAAG+GGG + chr7_3:80676830-80676849 None:intergenic 35.0%
GAAATTACTGAACAGTGTGA+AGG + chr7_3:80676832-80676851 None:intergenic 35.0%
!!! AGCTTTGGGAGTAATTTTGA+TGG - chr7_3:80676874-80676893 Msa1128780:CDS 35.0%
ACAGAATAGCATGAAAAGGA+AGG + chr7_3:80676951-80676970 None:intergenic 35.0%
ATTATACAGATCTCTGCATC+AGG - chr7_3:80676994-80677013 Msa1128780:intron 35.0%
! ATCTCTGTCATTCTTTTTGC+AGG - chr7_3:80677041-80677060 Msa1128780:intron 35.0%
TTTATGCAAGTCCTGCATAT+TGG + chr7_3:80677147-80677166 None:intergenic 35.0%
ATATGCAGGACTTGCATAAA+TGG - chr7_3:80677147-80677166 Msa1128780:CDS 35.0%
! CAAAACCGATTTATAAGTCG+AGG - chr7_3:80677251-80677270 Msa1128780:intron 35.0%
ACACTCCTCGACTTATAAAT+CGG + chr7_3:80677259-80677278 None:intergenic 35.0%
!!! TTTTAACTTTACCACCATCG+CGG + chr7_3:80677402-80677421 None:intergenic 35.0%
TATACAGGATCTTTCTCACT+TGG - chr7_3:80677473-80677492 Msa1128780:intron 35.0%
AAAATTTGCATACCCAGTGA+AGG + chr7_3:80677543-80677562 None:intergenic 35.0%
TCACATTGATGGGAAATATC+TGG + chr7_3:80677618-80677637 None:intergenic 35.0%
GATATTTCCCATCAATGTGA+AGG - chr7_3:80677618-80677637 Msa1128780:intron 35.0%
! GCTTTGTTACATTTGTTCAC+TGG - chr7_3:80677653-80677672 Msa1128780:intron 35.0%
!!! CTTTTAACTTCCTCATGAGT+TGG - chr7_3:80677701-80677720 Msa1128780:intron 35.0%
GAGAATATGAAGAAAGTTCC+TGG + chr7_3:80677878-80677897 None:intergenic 35.0%
TTCATATTCTCTAGCATCTG+TGG - chr7_3:80677887-80677906 Msa1128780:intron 35.0%
TTGCTACAAATAGAATGGTG+AGG + chr7_3:80677913-80677932 None:intergenic 35.0%
TTGTTGGATACTGTCTGATA+TGG + chr7_3:80677992-80678011 None:intergenic 35.0%
TGCCAAATTCATCTCTTTGT+TGG + chr7_3:80678008-80678027 None:intergenic 35.0%
TATGCATGCAATTCTGTTAC+AGG + chr7_3:80678037-80678056 None:intergenic 35.0%
!! TATGATGGATTGGTGTAGAA+AGG - chr7_3:80678088-80678107 Msa1128780:five_prime_UTR 35.0%
!!! TGGCATTGGTTTTGTTGTGA+AGG + chr7_3:80673727-80673746 None:intergenic 40.0%
AACTATCACTCTCATCTTGC+AGG - chr7_3:80674175-80674194 Msa1128780:intron 40.0%
ATCACAGATGACCTTGATCT+TGG - chr7_3:80674227-80674246 Msa1128780:intron 40.0%
!! GCTTTCTCTATGGCTTGTTT+GGG - chr7_3:80674338-80674357 Msa1128780:CDS 40.0%
!! GCTGTTTTCACAAGCTATCA+TGG + chr7_3:80674473-80674492 None:intergenic 40.0%
GGTAGTTTAGCAGATTATGC+AGG - chr7_3:80674705-80674724 Msa1128780:intron 40.0%
!! AGTTACCTTTGAGACTGCAA+TGG + chr7_3:80674878-80674897 None:intergenic 40.0%
ACAGAATTGAAGAAACACGG+AGG + chr7_3:80675002-80675021 None:intergenic 40.0%
CCATCAAATAGCAACTACGT+TGG + chr7_3:80675050-80675069 None:intergenic 40.0%
!! CCAACGTAGTTGCTATTTGA+TGG - chr7_3:80675047-80675066 Msa1128780:intron 40.0%
TTTGTTTGAAGGTTGCTTGG+TGG - chr7_3:80675081-80675100 Msa1128780:intron 40.0%
GGAAGACTATTGTTAGGATG+TGG - chr7_3:80675113-80675132 Msa1128780:CDS 40.0%
ATGCGGTTATTATGCTGTTG+CGG - chr7_3:80675408-80675427 Msa1128780:intron 40.0%
! TTGGAGCATTCTTCAATTGG+AGG - chr7_3:80675515-80675534 Msa1128780:intron 40.0%
!! TGGAGGCTTTTGGCTATAAT+AGG - chr7_3:80675532-80675551 Msa1128780:intron 40.0%
TCAATCCACTGACACAAACA+CGG - chr7_3:80675833-80675852 Msa1128780:intron 40.0%
CAGTGTTTACGTGTCAATGT+CGG + chr7_3:80675861-80675880 None:intergenic 40.0%
TGATAGTTGCATTGTTCTGC+AGG - chr7_3:80675981-80676000 Msa1128780:CDS 40.0%
AATCCACTTTACAGCACCTT+AGG - chr7_3:80676031-80676050 Msa1128780:intron 40.0%
ATCCACTTTACAGCACCTTA+GGG - chr7_3:80676032-80676051 Msa1128780:intron 40.0%
! TTGTGGGTTATCATCTAGCT+AGG - chr7_3:80676131-80676150 Msa1128780:intron 40.0%
TCACATTGTTAGGTAGGAGT+TGG - chr7_3:80676347-80676366 Msa1128780:CDS 40.0%
!! ACAGGGTTTTCCAGAAGTAT+TGG - chr7_3:80676681-80676700 Msa1128780:intron 40.0%
ATAGATCCCAATGACAGCTT+TGG - chr7_3:80676859-80676878 Msa1128780:CDS 40.0%
TAGATCCCAATGACAGCTTT+GGG - chr7_3:80676860-80676879 Msa1128780:CDS 40.0%
TTACTCCCAAAGCTGTCATT+GGG + chr7_3:80676868-80676887 None:intergenic 40.0%
ATTACTCCCAAAGCTGTCAT+TGG + chr7_3:80676869-80676888 None:intergenic 40.0%
TAAGATGATCTGCTCTTGCT+AGG - chr7_3:80677076-80677095 Msa1128780:intron 40.0%
GCTAGGTTGTTCTTCACAAT+AGG - chr7_3:80677093-80677112 Msa1128780:intron 40.0%
TTGGTTTAAGAATACCGCGA+TGG - chr7_3:80677385-80677404 Msa1128780:intron 40.0%
! GCGATGGTGGTAAAGTTAAA+AGG - chr7_3:80677401-80677420 Msa1128780:intron 40.0%
ACCTCAGACATTATAACCCA+GGG + chr7_3:80677512-80677531 None:intergenic 40.0%
TACCTCAGACATTATAACCC+AGG + chr7_3:80677513-80677532 None:intergenic 40.0%
AGGTAATATGCTCCTTCACT+GGG - chr7_3:80677528-80677547 Msa1128780:intron 40.0%
! TTGTTCACTGGTTGTGTTCT+TGG - chr7_3:80677665-80677684 Msa1128780:intron 40.0%
TAGGGTATGCTTCTTAAGTG+TGG - chr7_3:80677820-80677839 Msa1128780:intron 40.0%
AAAACTAGTACCAGAGACCA+AGG - chr7_3:80677931-80677950 Msa1128780:CDS 40.0%
AAACTAGTACCAGAGACCAA+GGG - chr7_3:80677932-80677951 Msa1128780:CDS 40.0%
!! TAGAATAAGGGTATCCCTAG+CGG - chr7_3:80678215-80678234 Msa1128780:five_prime_UTR 40.0%
CATTCGCGAAGAAGCTAGTT+CGG - chr7_3:80674001-80674020 Msa1128780:CDS 45.0%
TATCACTCTCATCTTGCAGG+TGG - chr7_3:80674178-80674197 Msa1128780:intron 45.0%
ATCACTCTCATCTTGCAGGT+GGG - chr7_3:80674179-80674198 Msa1128780:intron 45.0%
TATTCATCCCCTGCTCAATC+TGG - chr7_3:80674203-80674222 Msa1128780:intron 45.0%
TGTGATTCCAGATTGAGCAG+GGG + chr7_3:80674213-80674232 None:intergenic 45.0%
CTGTGATTCCAGATTGAGCA+GGG + chr7_3:80674214-80674233 None:intergenic 45.0%
TCTGTGATTCCAGATTGAGC+AGG + chr7_3:80674215-80674234 None:intergenic 45.0%
!! TGGCTTTAGTTGACTTGGAG+TGG - chr7_3:80674316-80674335 Msa1128780:CDS 45.0%
ACTTGGAGTGGCTTTCTCTA+TGG - chr7_3:80674328-80674347 Msa1128780:CDS 45.0%
!! GGCTTTCTCTATGGCTTGTT+TGG - chr7_3:80674337-80674356 Msa1128780:CDS 45.0%
CTAACAATTGGAGCGATGGT+TGG - chr7_3:80674669-80674688 Msa1128780:intron 45.0%
!! ATGGTTGGTGCCATTGTAAG+TGG - chr7_3:80674684-80674703 Msa1128780:intron 45.0%
TCCGAGCTATGTTGCATCTT+GGG - chr7_3:80674844-80674863 Msa1128780:intron 45.0%
TCCCAAGATGCAACATAGCT+CGG + chr7_3:80674848-80674867 None:intergenic 45.0%
AGCTATGTTGCATCTTGGGA+TGG - chr7_3:80674848-80674867 Msa1128780:intron 45.0%
!! GTTGCTTGGTGGCTTTATGT+TGG - chr7_3:80675092-80675111 Msa1128780:CDS 45.0%
! GGCAGTTCTCTTCCCATTTT+AGG - chr7_3:80675235-80675254 Msa1128780:intron 45.0%
ATAACACCCAAGGATCTTCG+AGG - chr7_3:80675278-80675297 Msa1128780:intron 45.0%
TAACACCCAAGGATCTTCGA+GGG - chr7_3:80675279-80675298 Msa1128780:intron 45.0%
AATCTCCCTCGAAGATCCTT+GGG + chr7_3:80675287-80675306 None:intergenic 45.0%
GAGATTCACTGCAGTTCATC+AGG - chr7_3:80675301-80675320 Msa1128780:CDS 45.0%
ATGCTGTTGCGGATACATGT+AGG - chr7_3:80675419-80675438 Msa1128780:intron 45.0%
TTGCATTGTTCTGCAGGCAA+AGG - chr7_3:80675987-80676006 Msa1128780:CDS 45.0%
ATTGTTCTGCAGGCAAAGGT+TGG - chr7_3:80675991-80676010 Msa1128780:intron 45.0%
TCCACTTTACAGCACCTTAG+GGG - chr7_3:80676033-80676052 Msa1128780:intron 45.0%
CAACAGTTTGGCGGAGTTAA+CGG - chr7_3:80676383-80676402 Msa1128780:intron 45.0%
TTGACCATCAGTGACATGTC+TGG - chr7_3:80676557-80676576 Msa1128780:intron 45.0%
AACACCAGACATGTCACTGA+TGG + chr7_3:80676564-80676583 None:intergenic 45.0%
ATCAGTGACATGTCTGGTGT+TGG - chr7_3:80676563-80676582 Msa1128780:intron 45.0%
! ACTTCTGGAAAACCCTGTGA+TGG + chr7_3:80676679-80676698 None:intergenic 45.0%
TCTGCATCAGGAACATGCTT+AGG - chr7_3:80677006-80677025 Msa1128780:intron 45.0%
GCAGGACTTGCATAAATGGA+AGG - chr7_3:80677151-80677170 Msa1128780:CDS 45.0%
GAAGGAATTCAGTCCCATTC+TGG - chr7_3:80677169-80677188 Msa1128780:intron 45.0%
GTTTAAGAATACCGCGATGG+TGG - chr7_3:80677388-80677407 Msa1128780:intron 45.0%
AGGATCTTTCTCACTTGGCA+TGG - chr7_3:80677478-80677497 Msa1128780:intron 45.0%
GGATCTTTCTCACTTGGCAT+GGG - chr7_3:80677479-80677498 Msa1128780:intron 45.0%
ACCCTGGGTTATAATGTCTG+AGG - chr7_3:80677508-80677527 Msa1128780:intron 45.0%
GAGGTAATATGCTCCTTCAC+TGG - chr7_3:80677527-80677546 Msa1128780:intron 45.0%
GCAGAACCCTTCACATTGAT+GGG + chr7_3:80677628-80677647 None:intergenic 45.0%
AGCAGAACCCTTCACATTGA+TGG + chr7_3:80677629-80677648 None:intergenic 45.0%
ATCAATGTGAAGGGTTCTGC+TGG - chr7_3:80677628-80677647 Msa1128780:intron 45.0%
CTGCTGAATTCCAACTCATG+AGG + chr7_3:80677714-80677733 None:intergenic 45.0%
! CTCATGAGTTGGAATTCAGC+AGG - chr7_3:80677712-80677731 Msa1128780:intron 45.0%
! TGAGTTGGAATTCAGCAGGT+AGG - chr7_3:80677716-80677735 Msa1128780:intron 45.0%
AACTAGTACCAGAGACCAAG+GGG - chr7_3:80677933-80677952 Msa1128780:CDS 45.0%
! GGATTGGTGTAGAAAGGTTC+AGG - chr7_3:80678094-80678113 Msa1128780:five_prime_UTR 45.0%
GAATAGCACCATGCTCGAAA+AGG - chr7_3:80678159-80678178 Msa1128780:five_prime_UTR 45.0%
!! GAAACACTCCTTTTCGAGCA+TGG + chr7_3:80678170-80678189 None:intergenic 45.0%
AACGTTAAGAGCTCCCAAGC+TGG + chr7_3:80673668-80673687 None:intergenic 50.0%
! CGAACTAGCTTCTTCGCGAA+TGG + chr7_3:80674003-80674022 None:intergenic 50.0%
AGAACCAGAGACAGCAGCAA+GGG + chr7_3:80674054-80674073 None:intergenic 50.0%
AAGAACCAGAGACAGCAGCA+AGG + chr7_3:80674055-80674074 None:intergenic 50.0%
ACATAGCTCGGAGAATCCCA+TGG + chr7_3:80674836-80674855 None:intergenic 50.0%
CTCCGAGCTATGTTGCATCT+TGG - chr7_3:80674843-80674862 Msa1128780:intron 50.0%
GCTTGCCATTGCAGTCTCAA+AGG - chr7_3:80674870-80674889 Msa1128780:intron 50.0%
GAATCTCCCTCGAAGATCCT+TGG + chr7_3:80675288-80675307 None:intergenic 50.0%
CTCAGAAGCTGTGCAAGACA+TGG + chr7_3:80675651-80675670 None:intergenic 50.0%
CCTAGGAGACTCGGGAATAA+AGG + chr7_3:80675679-80675698 None:intergenic 50.0%
CCTTTATTCCCGAGTCTCCT+AGG - chr7_3:80675676-80675695 Msa1128780:intron 50.0%
TTATTCCCGAGTCTCCTAGG+TGG - chr7_3:80675679-80675698 Msa1128780:intron 50.0%
! CAAAGGTTGGTCGCTTGGAA+AGG - chr7_3:80676004-80676023 Msa1128780:intron 50.0%
!! TCCCCTAAGGTGCTGTAAAG+TGG + chr7_3:80676037-80676056 None:intergenic 50.0%
! AGCTTCTGTTTGCTGCTGAG+AGG + chr7_3:80676217-80676236 None:intergenic 50.0%
! TGGAAGACGACCCCTTTTAC+TGG - chr7_3:80676904-80676923 Msa1128780:intron 50.0%
TCTTTCTCACTTGGCATGGG+AGG - chr7_3:80677482-80677501 Msa1128780:intron 50.0%
TGCTCTCAGATCAACCGCTA+GGG + chr7_3:80678232-80678251 None:intergenic 50.0%
GAACAACTCACCAGCCACCT+AGG + chr7_3:80675696-80675715 None:intergenic 55.0%
AGTCCCATTCTGGCACTCGT+CGG - chr7_3:80677179-80677198 Msa1128780:intron 55.0%
ACACCGACGAGTGCCAGAAT+GGG + chr7_3:80677185-80677204 None:intergenic 55.0%
TACACCGACGAGTGCCAGAA+TGG + chr7_3:80677186-80677205 None:intergenic 55.0%
TTGGCATGGGAGGAATACCC+TGG - chr7_3:80677492-80677511 Msa1128780:intron 55.0%
TGGCATGGGAGGAATACCCT+GGG - chr7_3:80677493-80677512 Msa1128780:intron 55.0%
TTCTTCTAGCGTACGCCCCT+TGG + chr7_3:80677951-80677970 None:intergenic 55.0%
GTGCTCTCAGATCAACCGCT+AGG + chr7_3:80678233-80678252 None:intergenic 55.0%
ACCACCCTTGCTGCTGTCTC+TGG - chr7_3:80674047-80674066 Msa1128780:CDS 60.0%
ACCAGAGACAGCAGCAAGGG+TGG + chr7_3:80674051-80674070 None:intergenic 60.0%
CCTCGGCTACGCCAAGATCA+AGG + chr7_3:80674241-80674260 None:intergenic 60.0%
CCTTGATCTTGGCGTAGCCG+AGG - chr7_3:80674238-80674257 Msa1128780:intron 60.0%
ACCAGCCACCTAGGAGACTC+GGG + chr7_3:80675687-80675706 None:intergenic 60.0%
CACCAGCCACCTAGGAGACT+CGG + chr7_3:80675688-80675707 None:intergenic 60.0%
!! CGGTGCCGTGTTTGTGTCAG+TGG + chr7_3:80675841-80675860 None:intergenic 60.0%
! GCAGGCAAAGGTTGGTCGCT+TGG - chr7_3:80675999-80676018 Msa1128780:intron 60.0%
TCTGGCACTCGTCGGTGTAC+TGG - chr7_3:80677187-80677206 Msa1128780:intron 60.0%
TCCCGAGTCTCCTAGGTGGC+TGG - chr7_3:80675683-80675702 Msa1128780:intron 65.0%
AGCGTACGCCCCTTGGTCTC+TGG + chr7_3:80677944-80677963 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 80673663 80678347 80673663 ID=Msa1128780;Name=Msa1128780
chr7_3 mRNA 80673663 80678347 80673663 ID=Msa1128780-mRNA-1;Parent=Msa1128780;Name=Msa1128780-mRNA-1;_AED=0.35;_eAED=0.35;_QI=297|1|1|1|1|1|18|290|483
chr7_3 exon 80673663 80674131 80673663 ID=Msa1128780-mRNA-1:exon:23235;Parent=Msa1128780-mRNA-1
chr7_3 exon 80674277 80674391 80674277 ID=Msa1128780-mRNA-1:exon:23234;Parent=Msa1128780-mRNA-1
chr7_3 exon 80674481 80674540 80674481 ID=Msa1128780-mRNA-1:exon:23233;Parent=Msa1128780-mRNA-1
chr7_3 exon 80674802 80674855 80674802 ID=Msa1128780-mRNA-1:exon:23232;Parent=Msa1128780-mRNA-1
chr7_3 exon 80674948 80675007 80674948 ID=Msa1128780-mRNA-1:exon:23231;Parent=Msa1128780-mRNA-1
chr7_3 exon 80675085 80675147 80675085 ID=Msa1128780-mRNA-1:exon:23230;Parent=Msa1128780-mRNA-1
chr7_3 exon 80675282 80675325 80675282 ID=Msa1128780-mRNA-1:exon:23229;Parent=Msa1128780-mRNA-1
chr7_3 exon 80675567 80675651 80675567 ID=Msa1128780-mRNA-1:exon:23228;Parent=Msa1128780-mRNA-1
chr7_3 exon 80675729 80675809 80675729 ID=Msa1128780-mRNA-1:exon:23227;Parent=Msa1128780-mRNA-1
chr7_3 exon 80675915 80676007 80675915 ID=Msa1128780-mRNA-1:exon:23226;Parent=Msa1128780-mRNA-1
chr7_3 exon 80676306 80676370 80676306 ID=Msa1128780-mRNA-1:exon:23225;Parent=Msa1128780-mRNA-1
chr7_3 exon 80676457 80676532 80676457 ID=Msa1128780-mRNA-1:exon:23224;Parent=Msa1128780-mRNA-1
chr7_3 exon 80676688 80676753 80676688 ID=Msa1128780-mRNA-1:exon:23223;Parent=Msa1128780-mRNA-1
chr7_3 exon 80676853 80676918 80676853 ID=Msa1128780-mRNA-1:exon:23222;Parent=Msa1128780-mRNA-1
chr7_3 exon 80677119 80677178 80677119 ID=Msa1128780-mRNA-1:exon:23221;Parent=Msa1128780-mRNA-1
chr7_3 exon 80677273 80677362 80677273 ID=Msa1128780-mRNA-1:exon:23220;Parent=Msa1128780-mRNA-1
chr7_3 exon 80677751 80677813 80677751 ID=Msa1128780-mRNA-1:exon:23219;Parent=Msa1128780-mRNA-1
chr7_3 exon 80677919 80678347 80677919 ID=Msa1128780-mRNA-1:exon:23218;Parent=Msa1128780-mRNA-1
chr7_3 five_prime_UTR 80678051 80678347 80678051 ID=Msa1128780-mRNA-1:five_prime_utr;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80677919 80678050 80677919 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80677751 80677813 80677751 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80677273 80677362 80677273 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80677119 80677178 80677119 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80676853 80676918 80676853 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80676688 80676753 80676688 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80676457 80676532 80676457 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80676306 80676370 80676306 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80675915 80676007 80675915 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80675729 80675809 80675729 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80675567 80675651 80675567 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80675282 80675325 80675282 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80675085 80675147 80675085 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80674948 80675007 80674948 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80674802 80674855 80674802 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80674481 80674540 80674481 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80674277 80674391 80674277 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 CDS 80673953 80674131 80673953 ID=Msa1128780-mRNA-1:cds;Parent=Msa1128780-mRNA-1
chr7_3 three_prime_UTR 80673663 80673952 80673663 ID=Msa1128780-mRNA-1:three_prime_utr;Parent=Msa1128780-mRNA-1
Gene Sequence

>Msa1128780

ATGAAGACTAAGTTTAAAGATTTTTCTCGTCTACTTTCTTCCATTCGCGAAGAAGCTAGTTCGGTACCAACTAGTATTCTTATACTTACCACCCTTGCTGCTGTCTCTGGTTCTTATGTTTTTGGCTCTGCGGTGGGCTATTCATCCCCTGCTCAATCTGGAATCACAGATGACCTTGATCTTGGCGTAGCCGAGTATTCACTTTTTGGTTCAATACTAACAATTGGAGCGATGGTTGGTGCCATTGTAAGTGGTAGTTTAGCAGATTATGCAGGTCGTCGAGCCGCCATGGGATTCTCCGAGCTATGTTGCATCTTGGGATGGCTTGCCATTGCAGTCTCAAAGGTTGCTTGGTGGCTTTATGTTGGAAGACTATTGTTAGGATGTGGAATGGGTATTCTATCATATGTGGTACCAATTTATATAGCTGAAATAACACCCAAGGATCTTCGAGGGAGATTCACTGCAGTTCATCAGCTAATGATTTGTTTTGGGGTATCACTAACTTATCTTATTGGAGCATTCTTCAATTGGAGGCTTTTGGCTATAATAGGAACTATTCCATGTCTTGCACAGCTTCTGAGTCTATCCTTTATTCCCGAGTCTCCTAGGTGGCTGGCAAAGGTTGGTCGCTTGGAAAGGAGTGAATCCACTTTACAGCACCTTAGGGGAAAGAATGTTGATATTTCTGAAGAGGCCACTGAAATTAGAGAATTTACAGAAGCCTCTCAGCAGCAAACAGAAGCTAACATTTTTGGGTTATTTCAATTGCAGTATTTGAAGTCACTTACTGTAGGAGTTGGCCTGATAATACTACAACAGTTTGGCGGAGTTAACGGCATTGCTTTTTATGCAAGTTCTATATTTGTCTCTGCTGGGTTTTCCAGAAGTATTGGAACAATAGCAATGGTTGTTGTTCAGATCCCAATGACAGCTTTGGGAGTAATTTTGATGGATAAATCTGGAAGACGACCCCTTTTACTGATCTCTGCATCAGGAACATGCTTAGGATGCTTCCTTGTATCTCTGTCATTCTTTTTGCAGGACTTGCATAAATGGAAGGAATTCAGTCCCATTCTGGCACTCGTCGGTGTACTGGTATATACAGGATCTTTCTCACTTGGCATGGGAGGAATACCCTGGGTTATAATGTCTGAGATATTTCCCATCAATGTGAAGGGTTCTGCTGGAAGCTTTGTTACATTTGTTCACTGGTTGTGTTCTTGGATTGTATCATATGCTTTTAACTTCCTCATGAGTTGGAATTCAGCAGGAACTTTCTTCATATTCTCTAGCATCTGTGGCCTCACCATTCTATTTGTAGCAAAACTAGTACCAGAGACCAAGGGGCGTACGCTAGAAGAAGTTCAAGCGTCTCTCAATCCATATCAGACAGTATCCAACAAAGAGATGAATTTGGCATATGATCCTGTAACAGAATTGCATGCATAA
Protein sequence

>Msa1128780

MKTKFKDFSRLLSSIREEASSVPTSILILTTLAAVSGSYVFGSAVGYSSPAQSGITDDLDLGVAEYSLFGSILTIGAMVGAIVSGSLADYAGRRAAMGFSELCCILGWLAIAVSKVAWWLYVGRLLLGCGMGILSYVVPIYIAEITPKDLRGRFTAVHQLMICFGVSLTYLIGAFFNWRLLAIIGTIPCLAQLLSLSFIPESPRWLAKVGRLERSESTLQHLRGKNVDISEEATEIREFTEASQQQTEANIFGLFQLQYLKSLTVGVGLIILQQFGGVNGIAFYASSIFVSAGFSRSIGTIAMVVVQIPMTALGVILMDKSGRRPLLLISASGTCLGCFLVSLSFFLQDLHKWKEFSPILALVGVLVYTGSFSLGMGGIPWVIMSEIFPINVKGSAGSFVTFVHWLCSWIVSYAFNFLMSWNSAGTFFIFSSICGLTILFVAKLVPETKGRTLEEVQASLNPYQTVSNKEMNLAYDPVTELHA*