Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1094230 | XP_024625689.1 | 97.333 | 75 | 2 | 0 | 1 | 75 | 1 | 75 | 2.78e-44 | 147 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1094230 | A0A396GV77 | 97.333 | 75 | 2 | 0 | 1 | 75 | 1 | 75 | 1.33e-44 | 147 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008090 | Msa1094230 | 0.809332 | 1.994255e-50 | -8.615850e-47 |
| Msa0032260 | Msa1094230 | 0.802785 | 4.758001e-49 | -8.615850e-47 |
| Msa0047980 | Msa1094230 | 0.808408 | 3.143261e-50 | -8.615850e-47 |
| Msa0064350 | Msa1094230 | 0.807277 | 5.466811e-50 | -8.615850e-47 |
| Msa0610390 | Msa1094230 | 0.802851 | 4.611269e-49 | -8.615850e-47 |
| Msa0650920 | Msa1094230 | 0.802579 | 5.248081e-49 | -8.615850e-47 |
| Msa0663900 | Msa1094230 | 0.809591 | 1.754689e-50 | -8.615850e-47 |
| Msa0689500 | Msa1094230 | 0.802122 | 6.517607e-49 | -8.615850e-47 |
| Msa0692940 | Msa1094230 | 0.808976 | 2.376451e-50 | -8.615850e-47 |
| Msa0165950 | Msa1094230 | 0.822040 | 2.929488e-53 | -8.615850e-47 |
| Msa0183460 | Msa1094230 | 0.805702 | 1.174989e-49 | -8.615850e-47 |
| Msa0199690 | Msa1094230 | 0.820068 | 8.337623e-53 | -8.615850e-47 |
| Msa0233350 | Msa1094230 | 0.804577 | 2.021017e-49 | -8.615850e-47 |
| Msa0376690 | Msa1094230 | 0.801011 | 1.100849e-48 | -8.615850e-47 |
| Msa0414800 | Msa1094230 | 0.807232 | 5.589168e-50 | -8.615850e-47 |
| Msa0458060 | Msa1094230 | 0.804132 | 2.501808e-49 | -8.615850e-47 |
| Msa1013040 | Msa1094230 | 0.820197 | 7.788244e-53 | -8.615850e-47 |
| Msa1094230 | Msa1165870 | 0.803291 | 3.738780e-49 | -8.615850e-47 |
| Msa1094230 | Msa1179950 | 0.803956 | 2.721216e-49 | -8.615850e-47 |
| Msa1094230 | Msa1179980 | 0.803046 | 4.201470e-49 | -8.615850e-47 |
| Msa1094230 | Msa1184370 | 0.822026 | 2.952230e-53 | -8.615850e-47 |
| Msa1094230 | Msa1227690 | 0.810312 | 1.227061e-50 | -8.615850e-47 |
| Msa1094230 | Msa1270620 | 0.805914 | 1.060596e-49 | -8.615850e-47 |
| Msa1094230 | Msa1270690 | 0.806013 | 1.010679e-49 | -8.615850e-47 |
| Msa1094230 | Msa1295110 | 0.812704 | 3.708074e-51 | -8.615850e-47 |
| Msa1094230 | Msa1304820 | 0.808143 | 3.579264e-50 | -8.615850e-47 |
| Msa1094230 | Msa1404010 | 0.812249 | 4.661719e-51 | -8.615850e-47 |
| Msa1094230 | Msa1450280 | 0.810874 | 9.276731e-51 | -8.615850e-47 |
| Msa1094230 | Msa1461280 | 0.815074 | 1.113499e-51 | -8.615850e-47 |
| Msa1094230 | Msa1465080 | 0.809300 | 2.025526e-50 | -8.615850e-47 |
| Msa0280430 | Msa1094230 | 0.824898 | 6.287640e-54 | -8.615850e-47 |
| Msa0304590 | Msa1094230 | 0.811512 | 6.746903e-51 | -8.615850e-47 |
| Msa0304660 | Msa1094230 | 0.801853 | 7.400436e-49 | -8.615850e-47 |
| Msa0331700 | Msa1094230 | 0.803517 | 3.357316e-49 | -8.615850e-47 |
| Msa0842830 | Msa1094230 | 0.807164 | 5.777083e-50 | -8.615850e-47 |
| Msa0847080 | Msa1094230 | 0.812464 | 4.184764e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1094230 | MtrunA17_Chr7g0224841 | 97.333 | 75 | 2 | 0 | 1 | 75 | 1 | 75 | 2.55e-48 | 147 |
| Msa1094230 | MtrunA17_Chr3g0078571 | 76.316 | 76 | 14 | 2 | 1 | 75 | 1 | 73 | 2.09e-34 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1094230 | AT5G14105.1 | 63.514 | 74 | 25 | 1 | 1 | 72 | 1 | 74 | 1.00e-22 | 82.8 |
Find 31 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGACGTTGCGTTTGAAAA+TGG | 0.236248 | 7_3:+15587680 | None:intergenic |
| TTAACAACAATATGAAATTA+TGG | 0.248335 | 7_3:-15582985 | Msa1094230:three_prime_UTR |
| GCGCTGTGGTTCTTCTTCTA+AGG | 0.305710 | 7_3:-15587725 | Msa1094230:CDS |
| TCGTCCTTAGGAGTGTCTTT+TGG | 0.362191 | 7_3:+15583195 | None:intergenic |
| TGAAAAGACTGCAAAGGAAC+TGG | 0.397284 | 7_3:-15583232 | Msa1094230:CDS |
| AATTTCATAATAACCGTTGC+TGG | 0.416636 | 7_3:-15587753 | Msa1094230:CDS |
| CATTAGTGTTTGTCGTCCTT+AGG | 0.439685 | 7_3:+15583183 | None:intergenic |
| ATCCATCATTAGCCAGTAAG+AGG | 0.457307 | 7_3:+15583096 | None:intergenic |
| ACGTCAAACAAATTCGTCAT+TGG | 0.463772 | 7_3:-15587665 | Msa1094230:CDS |
| GAACAGTGTTGTTCGTGAAT+CGG | 0.484730 | 7_3:-15587804 | Msa1094230:five_prime_UTR |
| CACCTCTTACTGGCTAATGA+TGG | 0.496892 | 7_3:-15583098 | Msa1094230:three_prime_UTR |
| TATGTTGCTGATAGAGTGAT+GGG | 0.513608 | 7_3:-15583158 | Msa1094230:three_prime_UTR |
| CGGCGTTCGAAGAGGAGTGA+TGG | 0.523464 | 7_3:-15587784 | Msa1094230:exon |
| TGCAAAGGAACTGGAATCAA+AGG | 0.527472 | 7_3:-15583223 | Msa1094230:CDS |
| CACTGTTCTATGATTGCAGA+GGG | 0.533521 | 7_3:+15587819 | None:intergenic |
| CAATGTCTAAATATAAGTCA+TGG | 0.542703 | 7_3:-15583032 | Msa1094230:three_prime_UTR |
| ATGCAGATATGCTAAAACCT+AGG | 0.557553 | 7_3:+15582950 | None:intergenic |
| GGCGTTCGAAGAGGAGTGAT+GGG | 0.564929 | 7_3:-15587783 | Msa1094230:exon |
| TATTTGACTGCTGAGAGTGA+GGG | 0.583739 | 7_3:-15582927 | Msa1094230:three_prime_UTR |
| TATGCTAAAACCTAGGACTG+TGG | 0.587010 | 7_3:+15582957 | None:intergenic |
| TTATTTGACTGCTGAGAGTG+AGG | 0.592284 | 7_3:-15582928 | Msa1094230:three_prime_UTR |
| TCGTGAATCGGCGTTCGAAG+AGG | 0.601510 | 7_3:-15587792 | Msa1094230:five_prime_UTR |
| TTATGTTGCTGATAGAGTGA+TGG | 0.608598 | 7_3:-15583159 | Msa1094230:three_prime_UTR |
| GAAAATTGAAAAGACTGCAA+AGG | 0.609181 | 7_3:-15583238 | Msa1094230:CDS |
| ATATCAAGGTTACAGTCAGA+AGG | 0.610114 | 7_3:+15582904 | None:intergenic |
| CACAGCGCTAACACCAGCAA+CGG | 0.616070 | 7_3:+15587740 | None:intergenic |
| TACTCCAAAAGACACTCCTA+AGG | 0.618231 | 7_3:-15583199 | Msa1094230:CDS |
| CGTTGCTGGTGTTAGCGCTG+TGG | 0.622803 | 7_3:-15587739 | Msa1094230:CDS |
| TTGCTGATAGAGTGATGGGG+TGG | 0.628428 | 7_3:-15583154 | Msa1094230:three_prime_UTR |
| ATGTTGCTGATAGAGTGATG+GGG | 0.674013 | 7_3:-15583157 | Msa1094230:three_prime_UTR |
| ACACTGTTCTATGATTGCAG+AGG | 0.710413 | 7_3:+15587818 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAGTTTTTTTAAAATACA+AGG | - | chr7_3:15583610-15583629 | Msa1094230:intron | 10.0% |
| !!! | TTATTTTTTCTGTTTAAATA+AGG | - | chr7_3:15585394-15585413 | Msa1094230:intron | 10.0% |
| !! | TACATTGATAAATTAATTAA+AGG | + | chr7_3:15587160-15587179 | None:intergenic | 10.0% |
| !!! | TTGTAAGTTTTTTGATATTA+TGG | - | chr7_3:15583237-15583256 | Msa1094230:CDS | 15.0% |
| !! | TTATTCCCTATAAATAATAA+CGG | + | chr7_3:15583969-15583988 | None:intergenic | 15.0% |
| !! | GTACATTTGAATAAATAAAA+TGG | + | chr7_3:15585178-15585197 | None:intergenic | 15.0% |
| !! | GTACATTTGAATAAATAAAA+TGG | + | chr7_3:15585178-15585197 | None:intergenic | 15.0% |
| !! | TTATTTATAGCCATTTATTA+TGG | - | chr7_3:15585361-15585380 | Msa1094230:intron | 15.0% |
| !!! | GTTCATATTAAACTATTTTA+AGG | + | chr7_3:15585896-15585915 | None:intergenic | 15.0% |
| !!! | TTTTTCTTCAAATTTTACTA+AGG | - | chr7_3:15586714-15586733 | Msa1094230:intron | 15.0% |
| !! | AGATTATAATTTGATGAATT+TGG | - | chr7_3:15587030-15587049 | Msa1094230:intron | 15.0% |
| !! | ACTAAATTGCAATATTTAAT+GGG | - | chr7_3:15587308-15587327 | Msa1094230:intron | 15.0% |
| !!! | ACTTTTAATTAATTCAAACA+TGG | + | chr7_3:15587389-15587408 | None:intergenic | 15.0% |
| !! | TTAACAACAATATGAAATTA+TGG | - | chr7_3:15587766-15587785 | Msa1094230:CDS | 15.0% |
| !! | AAGAAGAGAAAAATAGAAAA+GGG | + | chr7_3:15583149-15583168 | None:intergenic | 20.0% |
| !! | AAAGAAGAGAAAAATAGAAA+AGG | + | chr7_3:15583150-15583169 | None:intergenic | 20.0% |
| !! | GAAATATTCATATTCTCAAA+AGG | + | chr7_3:15583293-15583312 | None:intergenic | 20.0% |
| !! | AGAATATGAATATTTCAGAA+AGG | - | chr7_3:15583297-15583316 | Msa1094230:intron | 20.0% |
| !!! | GAATTTAATTGCAAACATTT+TGG | + | chr7_3:15584237-15584256 | None:intergenic | 20.0% |
| !! | GGAAAATGTAAATTATTGAA+TGG | - | chr7_3:15584322-15584341 | Msa1094230:intron | 20.0% |
| !!! | TTATCTAAATCTAGTTCAAA+TGG | + | chr7_3:15584808-15584827 | None:intergenic | 20.0% |
| !!! | TTTGCTTTTCAATATTTTTG+TGG | - | chr7_3:15585143-15585162 | Msa1094230:intron | 20.0% |
| !!! | TTTTCAATATTTTTGTGGAA+TGG | - | chr7_3:15585148-15585167 | Msa1094230:intron | 20.0% |
| !! | TTTATTCAAATGTACTACAA+AGG | - | chr7_3:15585183-15585202 | Msa1094230:intron | 20.0% |
| !! | TTTATTCAAATGTACTACAA+AGG | - | chr7_3:15585183-15585202 | Msa1094230:intron | 20.0% |
| !! | CAAGGTAAAAGAAAAAAATA+AGG | + | chr7_3:15585977-15585996 | None:intergenic | 20.0% |
| !!! | TTTGCTTTTCAATATTTTTG+TGG | - | chr7_3:15585143-15585162 | Msa1094230:intron | 20.0% |
| !!! | TTTTCAATATTTTTGTGGAA+CGG | - | chr7_3:15585148-15585167 | Msa1094230:intron | 20.0% |
| !! | CTTATGACAATAAATAAAAG+GGG | + | chr7_3:15586681-15586700 | None:intergenic | 20.0% |
| !! | CCTTATGACAATAAATAAAA+GGG | + | chr7_3:15586682-15586701 | None:intergenic | 20.0% |
| !! | ACCTTATGACAATAAATAAA+AGG | + | chr7_3:15586683-15586702 | None:intergenic | 20.0% |
| !! | GACTAAATTGCAATATTTAA+TGG | - | chr7_3:15587307-15587326 | Msa1094230:intron | 20.0% |
| !!! | ACTGTTTTTTGTTTTCTTTT+TGG | - | chr7_3:15587440-15587459 | Msa1094230:intron | 20.0% |
| ! | AATTAAGAAGAGTCTCAAAT+TGG | - | chr7_3:15583262-15583281 | Msa1094230:intron | 25.0% |
| !! | TTTAGGATATTCATATTCTC+AGG | - | chr7_3:15583667-15583686 | Msa1094230:intron | 25.0% |
| ! | TTAGGATATTCATATTCTCA+GGG | - | chr7_3:15583668-15583687 | Msa1094230:intron | 25.0% |
| ! | TTTGATTAATGCTTCCAAAA+CGG | + | chr7_3:15583695-15583714 | None:intergenic | 25.0% |
| !! | ATAAATAATAACGGAGTGTT+GGG | + | chr7_3:15583960-15583979 | None:intergenic | 25.0% |
| !! | TATAAATAATAACGGAGTGT+TGG | + | chr7_3:15583961-15583980 | None:intergenic | 25.0% |
| ! | AACACTCCGTTATTATTTAT+AGG | - | chr7_3:15583960-15583979 | Msa1094230:intron | 25.0% |
| ! | ACACTCCGTTATTATTTATA+GGG | - | chr7_3:15583961-15583980 | Msa1094230:intron | 25.0% |
| ! | TGTTGACAGTAGTTATAATT+TGG | - | chr7_3:15584300-15584319 | Msa1094230:intron | 25.0% |
| ! | GTTGACAGTAGTTATAATTT+GGG | - | chr7_3:15584301-15584320 | Msa1094230:intron | 25.0% |
| !! | CACATGAAAAACAAAGTTTT+TGG | + | chr7_3:15584476-15584495 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTCATGTGTGATT+AGG | - | chr7_3:15584481-15584500 | Msa1094230:intron | 25.0% |
| !!! | TTGTTTTTCATGTGTGATTA+GGG | - | chr7_3:15584482-15584501 | Msa1094230:intron | 25.0% |
| !!! | ATGCATAAACTTTTGTTTAC+AGG | - | chr7_3:15584731-15584750 | Msa1094230:intron | 25.0% |
| ! | TAAATGGCTATAAATAACAG+AGG | + | chr7_3:15585358-15585377 | None:intergenic | 25.0% |
| !!! | ATTTTTTTCAAACAAGCAAG+TGG | + | chr7_3:15585565-15585584 | None:intergenic | 25.0% |
| !! | AAAGAGTAGAAAATCCTTTT+GGG | + | chr7_3:15585754-15585773 | None:intergenic | 25.0% |
| !! | AAAAGAGTAGAAAATCCTTT+TGG | + | chr7_3:15585755-15585774 | None:intergenic | 25.0% |
| ! | ATTTATAGTGTAACCATGTA+GGG | - | chr7_3:15586045-15586064 | Msa1094230:intron | 25.0% |
| !!! | CCCTTTTATTTATTGTCATA+AGG | - | chr7_3:15586679-15586698 | Msa1094230:intron | 25.0% |
| ! | TATTTATTGTCATAAGGTCT+AGG | - | chr7_3:15586685-15586704 | Msa1094230:intron | 25.0% |
| ! | ATTTATTGTCATAAGGTCTA+GGG | - | chr7_3:15586686-15586705 | Msa1094230:intron | 25.0% |
| !! | AAGAATGCAACATTTTTCTA+TGG | - | chr7_3:15586786-15586805 | Msa1094230:intron | 25.0% |
| ! | TAATTCAATGAGTTAACACT+AGG | - | chr7_3:15586981-15587000 | Msa1094230:intron | 25.0% |
| !!! | AAGCTTTATGATTACTTTTG+TGG | - | chr7_3:15587194-15587213 | Msa1094230:intron | 25.0% |
| ! | TGAACTAAACTCTATTTCAA+CGG | + | chr7_3:15587246-15587265 | None:intergenic | 25.0% |
| ! | AATATTTAATGGGAGAAGAT+GGG | - | chr7_3:15587318-15587337 | Msa1094230:intron | 25.0% |
| ! | CAATGTCTAAATATAAGTCA+TGG | - | chr7_3:15587719-15587738 | Msa1094230:CDS | 25.0% |
| AATTTCATAATAACCGTTGC+TGG | - | chr7_3:15582998-15583017 | Msa1094230:three_prime_UTR | 30.0% | |
| ! | CTCTTCATTGTTTAAAGTGT+TGG | - | chr7_3:15583184-15583203 | Msa1094230:exon | 30.0% |
| !! | TTGTTTAAAGTGTTGGACTA+TGG | - | chr7_3:15583191-15583210 | Msa1094230:CDS | 30.0% |
| TCAACACTTACTATATGTTC+TGG | + | chr7_3:15583562-15583581 | None:intergenic | 30.0% | |
| AATCTATTAAGCTCTCAAGT+TGG | + | chr7_3:15583637-15583656 | None:intergenic | 30.0% | |
| ACTTGAGAGCTTAATAGATT+CGG | - | chr7_3:15583637-15583656 | Msa1094230:intron | 30.0% | |
| ! | ATAGATTCGGGAATCTTTTT+AGG | - | chr7_3:15583650-15583669 | Msa1094230:intron | 30.0% |
| ACAATCAAAACGAACATCTA+CGG | + | chr7_3:15583750-15583769 | None:intergenic | 30.0% | |
| TTGTAAAAAGAGCAAGTATG+TGG | + | chr7_3:15584440-15584459 | None:intergenic | 30.0% | |
| AACCAGAGAATTTGTATTAC+TGG | - | chr7_3:15584525-15584544 | Msa1094230:intron | 30.0% | |
| TTCCAGTAATACAAATTCTC+TGG | + | chr7_3:15584530-15584549 | None:intergenic | 30.0% | |
| ! | ATGTTTTCATTATCCTCTCA+AGG | + | chr7_3:15584607-15584626 | None:intergenic | 30.0% |
| ATTTATAGTGTAGCCATGTA+AGG | - | chr7_3:15584656-15584675 | Msa1094230:intron | 30.0% | |
| TTTATAGTGTAGCCATGTAA+GGG | - | chr7_3:15584657-15584676 | Msa1094230:intron | 30.0% | |
| !! | GTATACTGCTAATGTTGTTT+TGG | - | chr7_3:15584701-15584720 | Msa1094230:intron | 30.0% |
| ! | CATATCTGTCATCTATTTCT+TGG | + | chr7_3:15584904-15584923 | None:intergenic | 30.0% |
| GCAACAATTCTTCATATTGA+TGG | - | chr7_3:15584926-15584945 | Msa1094230:intron | 30.0% | |
| ! | AAGACTGTGTTAAGTTTTAC+TGG | + | chr7_3:15585108-15585127 | None:intergenic | 30.0% |
| ! | ATGTACTACAAAGGTTTTTG+TGG | - | chr7_3:15585192-15585211 | Msa1094230:intron | 30.0% |
| AACAGAAAAAATAAATCCCC+TGG | + | chr7_3:15585388-15585407 | None:intergenic | 30.0% | |
| CAATGAGTTAAAATATCGCA+TGG | + | chr7_3:15585518-15585537 | None:intergenic | 30.0% | |
| !! | TTGGTTATTAGCTTGTTAGT+AGG | - | chr7_3:15585723-15585742 | Msa1094230:intron | 30.0% |
| TAATTCATTGAGTTAACCCT+AGG | - | chr7_3:15585788-15585807 | Msa1094230:intron | 30.0% | |
| AATTCATTGAGTTAACCCTA+GGG | - | chr7_3:15585789-15585808 | Msa1094230:intron | 30.0% | |
| ! | TTGTTTTCATCAACTTCTCA+AGG | + | chr7_3:15585995-15586014 | None:intergenic | 30.0% |
| ! | GTTGATGAAAACAATGAAAG+TGG | - | chr7_3:15586001-15586020 | Msa1094230:intron | 30.0% |
| GATTTATAGTGTAACCATGT+AGG | - | chr7_3:15586044-15586063 | Msa1094230:intron | 30.0% | |
| TTTATAGTGTAACCATGTAG+GGG | - | chr7_3:15586046-15586065 | Msa1094230:intron | 30.0% | |
| !! | TATGCGTAAACTTTTGTTTC+AGG | - | chr7_3:15586125-15586144 | Msa1094230:intron | 30.0% |
| !! | ATGCGTAAACTTTTGTTTCA+GGG | - | chr7_3:15586126-15586145 | Msa1094230:intron | 30.0% |
| TGCTAAGTTATAGTAAGAAG+TGG | - | chr7_3:15586290-15586309 | Msa1094230:intron | 30.0% | |
| TTTATTGTCATAAGGTCTAG+GGG | - | chr7_3:15586687-15586706 | Msa1094230:intron | 30.0% | |
| ! | TGCAACATTTTTCTATGGAT+TGG | - | chr7_3:15586791-15586810 | Msa1094230:intron | 30.0% |
| !!! | CATTTTTCTATGGATTGGTT+TGG | - | chr7_3:15586796-15586815 | Msa1094230:intron | 30.0% |
| AAAACTTCAGACAACATTGT+AGG | - | chr7_3:15586910-15586929 | Msa1094230:intron | 30.0% | |
| TCTGAGAGATTTATAGCTTA+TGG | + | chr7_3:15587013-15587032 | None:intergenic | 30.0% | |
| CAATATTTAATGGGAGAAGA+TGG | - | chr7_3:15587317-15587336 | Msa1094230:intron | 30.0% | |
| GATAATGATTTGAACACAGA+AGG | - | chr7_3:15587355-15587374 | Msa1094230:intron | 30.0% | |
| ! | TGTTTTGTATTGTCTATTGC+AGG | - | chr7_3:15587491-15587510 | Msa1094230:intron | 30.0% |
| GAAAATTGAAAAGACTGCAA+AGG | - | chr7_3:15587513-15587532 | Msa1094230:intron | 30.0% | |
| TTTGACGTTGCGTTTGAAAA+TGG | + | chr7_3:15583074-15583093 | None:intergenic | 35.0% | |
| ACGTCAAACAAATTCGTCAT+TGG | - | chr7_3:15583086-15583105 | Msa1094230:three_prime_UTR | 35.0% | |
| TGTCACCCTTATATAGAGAA+AGG | - | chr7_3:15583357-15583376 | Msa1094230:intron | 35.0% | |
| ! | ACTTACTATATGTTCTGGAC+CGG | + | chr7_3:15583557-15583576 | None:intergenic | 35.0% |
| CTTGAGAGCTTAATAGATTC+GGG | - | chr7_3:15583638-15583657 | Msa1094230:intron | 35.0% | |
| !! | TGGAAGCATTAATCAAAGCT+AGG | - | chr7_3:15583698-15583717 | Msa1094230:intron | 35.0% |
| !! | GGAAGCATTAATCAAAGCTA+GGG | - | chr7_3:15583699-15583718 | Msa1094230:intron | 35.0% |
| TCTGCCAAGTTTAAGCTTTA+AGG | - | chr7_3:15584145-15584164 | Msa1094230:intron | 35.0% | |
| GTCACCTTAAAGCTTAAACT+TGG | + | chr7_3:15584152-15584171 | None:intergenic | 35.0% | |
| TTGAATGGAACGAAATGTGT+CGG | - | chr7_3:15584337-15584356 | Msa1094230:intron | 35.0% | |
| AATTTGTAGTGCTAGTGATG+TGG | - | chr7_3:15584391-15584410 | Msa1094230:intron | 35.0% | |
| !!! | GGGTTTTAAACCAGTGTAAT+AGG | - | chr7_3:15584502-15584521 | Msa1094230:intron | 35.0% |
| CAAGGAAACGGACAAAAATT+AGG | + | chr7_3:15584589-15584608 | None:intergenic | 35.0% | |
| TCATTATCCTCTCAAGGAAA+CGG | + | chr7_3:15584601-15584620 | None:intergenic | 35.0% | |
| ! | CTACAAAGGTTTTTGTGGAA+TGG | - | chr7_3:15585197-15585216 | Msa1094230:intron | 35.0% |
| ! | CTCTTACAATGTTGTTTAGC+TGG | - | chr7_3:15585277-15585296 | Msa1094230:intron | 35.0% |
| ATAGCCATTTATTATGGTCC+AGG | - | chr7_3:15585367-15585386 | Msa1094230:intron | 35.0% | |
| TAGCCATTTATTATGGTCCA+GGG | - | chr7_3:15585368-15585387 | Msa1094230:intron | 35.0% | |
| TGTGTGATCAATTAGACTCA+AGG | - | chr7_3:15585476-15585495 | Msa1094230:intron | 35.0% | |
| AACTCATTGAGTTTAACCCA+AGG | - | chr7_3:15585529-15585548 | Msa1094230:intron | 35.0% | |
| ACTCATTGAGTTTAACCCAA+GGG | - | chr7_3:15585530-15585549 | Msa1094230:intron | 35.0% | |
| TTTCAAACAAGCAAGTGGAA+TGG | + | chr7_3:15585560-15585579 | None:intergenic | 35.0% | |
| ! | ATCATGCAACCTTTTCATCT+GGG | - | chr7_3:15585612-15585631 | Msa1094230:intron | 35.0% |
| AAGTTTGTCAAACAAGCAAG+TGG | + | chr7_3:15585824-15585843 | None:intergenic | 35.0% | |
| TGTAGCTAATGTTAAGCTGA+AGG | - | chr7_3:15585945-15585964 | Msa1094230:intron | 35.0% | |
| TTATTTGTTCAGCCAACAAC+AGG | + | chr7_3:15586158-15586177 | None:intergenic | 35.0% | |
| ! | TTGTTGGCTGAACAAATAAC+TGG | - | chr7_3:15586159-15586178 | Msa1094230:intron | 35.0% |
| CAAACTTTGATACAGACACT+GGG | + | chr7_3:15586456-15586475 | None:intergenic | 35.0% | |
| TCAAACTTTGATACAGACAC+TGG | + | chr7_3:15586457-15586476 | None:intergenic | 35.0% | |
| !! | TTTCTATGGATTGGTTTGGA+AGG | - | chr7_3:15586800-15586819 | Msa1094230:intron | 35.0% |
| !! | TTCTATGGATTGGTTTGGAA+GGG | - | chr7_3:15586801-15586820 | Msa1094230:intron | 35.0% |
| ACATGCTAATTAGTTCACAC+AGG | - | chr7_3:15586871-15586890 | Msa1094230:intron | 35.0% | |
| TGTAGGATTAGACTCAGAAA+AGG | - | chr7_3:15586927-15586946 | Msa1094230:intron | 35.0% | |
| TTATGTTGCTGATAGAGTGA+TGG | - | chr7_3:15587592-15587611 | Msa1094230:intron | 35.0% | |
| TATGTTGCTGATAGAGTGAT+GGG | - | chr7_3:15587593-15587612 | Msa1094230:intron | 35.0% | |
| ! | TTTTTGTTCTCACCTCTTAC+TGG | - | chr7_3:15587643-15587662 | Msa1094230:CDS | 35.0% |
| ATGCAGATATGCTAAAACCT+AGG | + | chr7_3:15587804-15587823 | None:intergenic | 35.0% | |
| !! | TGCAGAGGGTTTTTCAGTTT+TGG | + | chr7_3:15582921-15582940 | None:intergenic | 40.0% |
| CACTGTTCTATGATTGCAGA+GGG | + | chr7_3:15582935-15582954 | None:intergenic | 40.0% | |
| ACACTGTTCTATGATTGCAG+AGG | + | chr7_3:15582936-15582955 | None:intergenic | 40.0% | |
| ! | GAACAGTGTTGTTCGTGAAT+CGG | - | chr7_3:15582947-15582966 | Msa1094230:three_prime_UTR | 40.0% |
| CACCCTTATATAGAGAAAGG+AGG | - | chr7_3:15583360-15583379 | Msa1094230:intron | 40.0% | |
| CGCCTCCTTTCTCTATATAA+GGG | + | chr7_3:15583365-15583384 | None:intergenic | 40.0% | |
| CAGAGTGAGCATAATAACTC+TGG | + | chr7_3:15583472-15583491 | None:intergenic | 40.0% | |
| CAGAGTTATTATGCTCACTC+TGG | - | chr7_3:15583470-15583489 | Msa1094230:intron | 40.0% | |
| AGTTATTATGCTCACTCTGG+TGG | - | chr7_3:15583473-15583492 | Msa1094230:intron | 40.0% | |
| ATCAAAGCTAGGGACGAATT+TGG | - | chr7_3:15583709-15583728 | Msa1094230:intron | 40.0% | |
| AAGAGTGAGAGGCAACTTAT+AGG | - | chr7_3:15583915-15583934 | Msa1094230:intron | 40.0% | |
| !! | ATAATAACGGAGTGTTGGGT+CGG | + | chr7_3:15583956-15583975 | None:intergenic | 40.0% |
| CAAGAGACAACTCTCTATGA+GGG | + | chr7_3:15584013-15584032 | None:intergenic | 40.0% | |
| CTCATAGAGAGTTGTCTCTT+GGG | - | chr7_3:15584012-15584031 | Msa1094230:intron | 40.0% | |
| TCATAGAGAGTTGTCTCTTG+GGG | - | chr7_3:15584013-15584032 | Msa1094230:intron | 40.0% | |
| AACTCCATCCAGATCATTAC+AGG | + | chr7_3:15584042-15584061 | None:intergenic | 40.0% | |
| TCTGGATGGAGTTATAGCAT+TGG | - | chr7_3:15584049-15584068 | Msa1094230:intron | 40.0% | |
| ! | TGGAGTTATAGCATTGGATC+TGG | - | chr7_3:15584055-15584074 | Msa1094230:intron | 40.0% |
| !! | GTTTAAGCTTTAAGGTGACC+CGG | - | chr7_3:15584153-15584172 | Msa1094230:intron | 40.0% |
| !! | TTTAAGCTTTAAGGTGACCC+GGG | - | chr7_3:15584154-15584173 | Msa1094230:intron | 40.0% |
| CAACATATTCGTATTGCGTC+TGG | + | chr7_3:15584285-15584304 | None:intergenic | 40.0% | |
| ! | TTCTCTGGTTCCTATTACAC+TGG | + | chr7_3:15584515-15584534 | None:intergenic | 40.0% |
| ! | TTTTTGTCCGTTTCCTTGAG+AGG | - | chr7_3:15584591-15584610 | Msa1094230:intron | 40.0% |
| TACATGTGCCAGTATTGTGT+CGG | + | chr7_3:15584970-15584989 | None:intergenic | 40.0% | |
| TAGCTGGAGAATGCAATTGT+TGG | - | chr7_3:15585293-15585312 | Msa1094230:intron | 40.0% | |
| AGCCATTTATTATGGTCCAG+GGG | - | chr7_3:15585369-15585388 | Msa1094230:intron | 40.0% | |
| ATCCCCTGGACCATAATAAA+TGG | + | chr7_3:15585374-15585393 | None:intergenic | 40.0% | |
| GGTGCTTCATCATTATCTGA+TGG | - | chr7_3:15585415-15585434 | Msa1094230:intron | 40.0% | |
| ! | GATCATGCAACCTTTTCATC+TGG | - | chr7_3:15585611-15585630 | Msa1094230:intron | 40.0% |
| CAAATCCAACCCAGATGAAA+AGG | + | chr7_3:15585624-15585643 | None:intergenic | 40.0% | |
| !! | CTTTTCATCTGGGTTGGATT+TGG | - | chr7_3:15585622-15585641 | Msa1094230:intron | 40.0% |
| ATCGCTCAGAGTTGTTGAAT+TGG | - | chr7_3:15585704-15585723 | Msa1094230:intron | 40.0% | |
| GTTAGTAGGATAGACCCAAA+AGG | - | chr7_3:15585737-15585756 | Msa1094230:intron | 40.0% | |
| TGTCAAACAAGCAAGTGGAA+TGG | + | chr7_3:15585819-15585838 | None:intergenic | 40.0% | |
| CACACACAAAAACAGAGCTT+AGG | + | chr7_3:15585856-15585875 | None:intergenic | 40.0% | |
| !!! | GTGTGCTGCTATTGTTGTTT+TGG | - | chr7_3:15586096-15586115 | Msa1094230:intron | 40.0% |
| TTGGCTGAACAAATAACTGG+AGG | - | chr7_3:15586162-15586181 | Msa1094230:intron | 40.0% | |
| AGCAATAGCCCTCATATTGA+TGG | - | chr7_3:15586326-15586345 | Msa1094230:intron | 40.0% | |
| CAAAGACGCCATCAATATGA+GGG | + | chr7_3:15586337-15586356 | None:intergenic | 40.0% | |
| ! | GGCGTCTTTGGTTTCTAATA+CGG | - | chr7_3:15586347-15586366 | Msa1094230:intron | 40.0% |
| ! | GCACTTTCTTTTTATCCCTG+TGG | + | chr7_3:15586572-15586591 | None:intergenic | 40.0% |
| TGAAAAGACTGCAAAGGAAC+TGG | - | chr7_3:15587519-15587538 | Msa1094230:intron | 40.0% | |
| TGCAAAGGAACTGGAATCAA+AGG | - | chr7_3:15587528-15587547 | Msa1094230:intron | 40.0% | |
| TACTCCAAAAGACACTCCTA+AGG | - | chr7_3:15587552-15587571 | Msa1094230:intron | 40.0% | |
| CATTAGTGTTTGTCGTCCTT+AGG | + | chr7_3:15587571-15587590 | None:intergenic | 40.0% | |
| ATGTTGCTGATAGAGTGATG+GGG | - | chr7_3:15587594-15587613 | Msa1094230:intron | 40.0% | |
| ATCCATCATTAGCCAGTAAG+AGG | + | chr7_3:15587658-15587677 | None:intergenic | 40.0% | |
| ! | TATGGTTTTTCCACAGTCCT+AGG | - | chr7_3:15587784-15587803 | Msa1094230:exon | 40.0% |
| TATGCTAAAACCTAGGACTG+TGG | + | chr7_3:15587797-15587816 | None:intergenic | 40.0% | |
| TTATTTGACTGCTGAGAGTG+AGG | - | chr7_3:15587823-15587842 | Msa1094230:five_prime_UTR | 40.0% | |
| TATTTGACTGCTGAGAGTGA+GGG | - | chr7_3:15587824-15587843 | Msa1094230:five_prime_UTR | 40.0% | |
| GCGCCTCCTTTCTCTATATA+AGG | + | chr7_3:15583366-15583385 | None:intergenic | 45.0% | |
| CTATGTCCACGTGTTAGCAT+TGG | - | chr7_3:15583518-15583537 | Msa1094230:intron | 45.0% | |
| ! | TCCACGTGTTAGCATTGGAT+TGG | - | chr7_3:15583523-15583542 | Msa1094230:intron | 45.0% |
| !! | CATTGGATTGGCTTTCTAGC+CGG | - | chr7_3:15583535-15583554 | Msa1094230:intron | 45.0% |
| ! | CATATTCTCAGGGACCGTTT+TGG | - | chr7_3:15583678-15583697 | Msa1094230:intron | 45.0% |
| AAAGCTAGGGACGAATTTGG+CGG | - | chr7_3:15583712-15583731 | Msa1094230:intron | 45.0% | |
| GATGATCTCTACGCAAGTAG+AGG | - | chr7_3:15583782-15583801 | Msa1094230:intron | 45.0% | |
| CTCTAGTGGAGAAGGAATCA+CGG | + | chr7_3:15583839-15583858 | None:intergenic | 45.0% | |
| ATTCCTTCTCCACTAGAGGA+AGG | - | chr7_3:15583841-15583860 | Msa1094230:intron | 45.0% | |
| TTCCTTCTCCACTAGAGGAA+GGG | - | chr7_3:15583842-15583861 | Msa1094230:intron | 45.0% | |
| AGTGAGAGAACAAGAGTGAG+AGG | - | chr7_3:15583904-15583923 | Msa1094230:intron | 45.0% | |
| !! | TAATAACGGAGTGTTGGGTC+GGG | + | chr7_3:15583955-15583974 | None:intergenic | 45.0% |
| CCAAGAGACAACTCTCTATG+AGG | + | chr7_3:15584014-15584033 | None:intergenic | 45.0% | |
| CCTCATAGAGAGTTGTCTCT+TGG | - | chr7_3:15584011-15584030 | Msa1094230:intron | 45.0% | |
| GACACCTGTAATGATCTGGA+TGG | - | chr7_3:15584035-15584054 | Msa1094230:intron | 45.0% | |
| ! | AGCATTGGATCTGGACTAGA+CGG | - | chr7_3:15584064-15584083 | Msa1094230:intron | 45.0% |
| ACCATGATCTAGTGGGACTT+AGG | - | chr7_3:15584105-15584124 | Msa1094230:intron | 45.0% | |
| CCATGATCTAGTGGGACTTA+GGG | - | chr7_3:15584106-15584125 | Msa1094230:intron | 45.0% | |
| AAACTTGGCAGACCATACCA+TGG | + | chr7_3:15584137-15584156 | None:intergenic | 45.0% | |
| GTAAATGTTCTGCCCAATCC+AGG | + | chr7_3:15584186-15584205 | None:intergenic | 45.0% | |
| GATTCTCTGCATCCCTTACA+TGG | + | chr7_3:15584672-15584691 | None:intergenic | 45.0% | |
| TTAGTTGTTCAGCCAACCAC+GGG | + | chr7_3:15584763-15584782 | None:intergenic | 45.0% | |
| GTTAGTTGTTCAGCCAACCA+CGG | + | chr7_3:15584764-15584783 | None:intergenic | 45.0% | |
| ! | TGGTTGGCTGAACAACTAAC+TGG | - | chr7_3:15584764-15584783 | Msa1094230:intron | 45.0% |
| TTGTACTCTGACTCAGACAC+CGG | + | chr7_3:15585052-15585071 | None:intergenic | 45.0% | |
| CTGGAGAATGCAATTGTTGG+TGG | - | chr7_3:15585296-15585315 | Msa1094230:intron | 45.0% | |
| AAGTGGAATGGTCTTCCCTT+GGG | + | chr7_3:15585548-15585567 | None:intergenic | 45.0% | |
| ! | TGCAACCTTTTCATCTGGGT+TGG | - | chr7_3:15585616-15585635 | Msa1094230:intron | 45.0% |
| ! | CATCTGGGTTGGATTTGGAA+AGG | - | chr7_3:15585627-15585646 | Msa1094230:intron | 45.0% |
| AAGTGGAATGGTCTTCCCTA+GGG | + | chr7_3:15585807-15585826 | None:intergenic | 45.0% | |
| TTGTTCAGCCAACAACAGGA+AGG | + | chr7_3:15586154-15586173 | None:intergenic | 45.0% | |
| CCAAAGACGCCATCAATATG+AGG | + | chr7_3:15586338-15586357 | None:intergenic | 45.0% | |
| !! | CCTCATATTGATGGCGTCTT+TGG | - | chr7_3:15586335-15586354 | Msa1094230:intron | 45.0% |
| ! | ATTTTTGTGGAACGGTCCAC+AGG | - | chr7_3:15586553-15586572 | Msa1094230:intron | 45.0% |
| ! | TTTTTGTGGAACGGTCCACA+GGG | - | chr7_3:15586554-15586573 | Msa1094230:intron | 45.0% |
| !!! | TCGTCCTTAGGAGTGTCTTT+TGG | + | chr7_3:15587559-15587578 | None:intergenic | 45.0% |
| ! | CACCTCTTACTGGCTAATGA+TGG | - | chr7_3:15587653-15587672 | Msa1094230:CDS | 45.0% |
| GCGCTGTGGTTCTTCTTCTA+AGG | - | chr7_3:15583026-15583045 | Msa1094230:three_prime_UTR | 50.0% | |
| CGCGTTATCAGGAAGCCATT+GGG | - | chr7_3:15583391-15583410 | Msa1094230:intron | 50.0% | |
| GCGTTATCAGGAAGCCATTG+GGG | - | chr7_3:15583392-15583411 | Msa1094230:intron | 50.0% | |
| CGTTATCAGGAAGCCATTGG+GGG | - | chr7_3:15583393-15583412 | Msa1094230:intron | 50.0% | |
| GCCAATCCAATGCTAACACG+TGG | + | chr7_3:15583527-15583546 | None:intergenic | 50.0% | |
| TAGTGGAGAAGGAATCACGG+TGG | + | chr7_3:15583836-15583855 | None:intergenic | 50.0% | |
| CGTGATTCCTTCTCCACTAG+AGG | - | chr7_3:15583837-15583856 | Msa1094230:intron | 50.0% | |
| GTAAACCACCCTTCCTCTAG+TGG | + | chr7_3:15583853-15583872 | None:intergenic | 50.0% | |
| TGGGGACACCTGTAATGATC+TGG | - | chr7_3:15584031-15584050 | Msa1094230:intron | 50.0% | |
| CATGGTGCGGATCATCAATC+TGG | + | chr7_3:15584091-15584110 | None:intergenic | 50.0% | |
| TGATCCGCACCATGATCTAG+TGG | - | chr7_3:15584097-15584116 | Msa1094230:intron | 50.0% | |
| GATCCGCACCATGATCTAGT+GGG | - | chr7_3:15584098-15584117 | Msa1094230:intron | 50.0% | |
| AGTCCCACTAGATCATGGTG+CGG | + | chr7_3:15584104-15584123 | None:intergenic | 50.0% | |
| CCCTAAGTCCCACTAGATCA+TGG | + | chr7_3:15584109-15584128 | None:intergenic | 50.0% | |
| TGTTCTGCCCAATCCAGGTT+TGG | + | chr7_3:15584181-15584200 | None:intergenic | 50.0% | |
| !! | ATGTGTCGGTGTCGTGACAT+TGG | - | chr7_3:15584351-15584370 | Msa1094230:intron | 50.0% |
| TGTTTACAGGATCCTTCCCG+TGG | - | chr7_3:15584744-15584763 | Msa1094230:intron | 50.0% | |
| ! | TGCCAGTATTGTGTCGGTGT+CGG | + | chr7_3:15584964-15584983 | None:intergenic | 50.0% |
| CTACATGTCAGTGTCGTGTC+CGG | - | chr7_3:15585030-15585049 | Msa1094230:intron | 50.0% | |
| CAAGTGGAATGGTCTTCCCT+TGG | + | chr7_3:15585549-15585568 | None:intergenic | 50.0% | |
| CAAGTGGAATGGTCTTCCCT+AGG | + | chr7_3:15585549-15585568 | None:intergenic | 50.0% | |
| GTAACCATGTAGGGGATGCA+AGG | - | chr7_3:15586054-15586073 | Msa1094230:intron | 50.0% | |
| GATACCTTGCATCCCCTACA+TGG | + | chr7_3:15586061-15586080 | None:intergenic | 50.0% | |
| TCAGGGATCCTTCCTGTTGT+TGG | - | chr7_3:15586143-15586162 | Msa1094230:intron | 50.0% | |
| TAGCTGCAGACTGCAGTTGT+TGG | - | chr7_3:15586616-15586635 | Msa1094230:intron | 50.0% | |
| ! | TTGCTGATAGAGTGATGGGG+TGG | - | chr7_3:15587597-15587616 | Msa1094230:intron | 50.0% |
| TCGTGAATCGGCGTTCGAAG+AGG | - | chr7_3:15582959-15582978 | Msa1094230:three_prime_UTR | 55.0% | |
| GGCGTTCGAAGAGGAGTGAT+GGG | - | chr7_3:15582968-15582987 | Msa1094230:three_prime_UTR | 55.0% | |
| CACAGCGCTAACACCAGCAA+CGG | + | chr7_3:15583014-15583033 | None:intergenic | 55.0% | |
| AGGCGCTAATGCGCGTTATC+AGG | - | chr7_3:15583380-15583399 | Msa1094230:intron | 55.0% | |
| GCGCGTTATCAGGAAGCCAT+TGG | - | chr7_3:15583390-15583409 | Msa1094230:intron | 55.0% | |
| TGCATCCTACACCGTACACG+TGG | + | chr7_3:15583419-15583438 | None:intergenic | 55.0% | |
| CGTGTACGGTGTAGGATGCA+CGG | - | chr7_3:15583419-15583438 | Msa1094230:intron | 55.0% | |
| GTGTACGGTGTAGGATGCAC+GGG | - | chr7_3:15583420-15583439 | Msa1094230:intron | 55.0% | |
| TGTACGGTGTAGGATGCACG+GGG | - | chr7_3:15583421-15583440 | Msa1094230:intron | 55.0% | |
| ! | CTGGTGGCGTGTCTTTGATC+CGG | - | chr7_3:15583489-15583508 | Msa1094230:intron | 55.0% |
| CACGTGGACATAGAGTCCAC+CGG | + | chr7_3:15583511-15583530 | None:intergenic | 55.0% | |
| !! | GGAATCACGGTGGACTACAG+CGG | + | chr7_3:15583826-15583845 | None:intergenic | 55.0% |
| CACCCTTCCTCTAGTGGAGA+AGG | + | chr7_3:15583847-15583866 | None:intergenic | 55.0% | |
| CTTCTCCACTAGAGGAAGGG+TGG | - | chr7_3:15583845-15583864 | Msa1094230:intron | 55.0% | |
| CTTAGGGCGTGTCCATGGTA+TGG | - | chr7_3:15584122-15584141 | Msa1094230:intron | 55.0% | |
| TACAGGATCCTTCCCGTGGT+TGG | - | chr7_3:15584748-15584767 | Msa1094230:intron | 55.0% | |
| TTGTTCAGCCAACCACGGGA+AGG | + | chr7_3:15584759-15584778 | None:intergenic | 55.0% | |
| GTCCGACACCGACACAATAC+TGG | - | chr7_3:15584959-15584978 | Msa1094230:intron | 55.0% | |
| CTGCAGACTGCAGTTGTTGG+TGG | - | chr7_3:15586619-15586638 | Msa1094230:intron | 55.0% | |
| CGGCGTTCGAAGAGGAGTGA+TGG | - | chr7_3:15582967-15582986 | Msa1094230:three_prime_UTR | 60.0% | |
| ! | CGTTGCTGGTGTTAGCGCTG+TGG | - | chr7_3:15583012-15583031 | Msa1094230:three_prime_UTR | 60.0% |
| GTACGGTGTAGGATGCACGG+GGG | - | chr7_3:15583422-15583441 | Msa1094230:intron | 60.0% | |
| GTGGCGTGTCTTTGATCCGG+TGG | - | chr7_3:15583492-15583511 | Msa1094230:intron | 60.0% | |
| TGGGACTTAGGGCGTGTCCA+TGG | - | chr7_3:15584117-15584136 | Msa1094230:intron | 60.0% | |
| ACCCGGGTCCAAACCTGGAT+TGG | - | chr7_3:15584170-15584189 | Msa1094230:intron | 60.0% | |
| CCCAATCCAGGTTTGGACCC+GGG | + | chr7_3:15584174-15584193 | None:intergenic | 60.0% | |
| CCCGGGTCCAAACCTGGATT+GGG | - | chr7_3:15584171-15584190 | Msa1094230:intron | 60.0% | |
| GCCCAATCCAGGTTTGGACC+CGG | + | chr7_3:15584175-15584194 | None:intergenic | 60.0% | |
| GCCATTGGGGGCCACGTGTA+CGG | - | chr7_3:15583405-15583424 | Msa1094230:intron | 65.0% | |
| ACCGTACACGTGGCCCCCAA+TGG | + | chr7_3:15583409-15583428 | None:intergenic | 65.0% | |
| ! | TGCACGGGGGCGTGCTTTAG+TGG | - | chr7_3:15583435-15583454 | Msa1094230:intron | 65.0% |
| ! | GCACGGGGGCGTGCTTTAGT+GGG | - | chr7_3:15583436-15583455 | Msa1094230:intron | 65.0% |
| ! | CACGGGGGCGTGCTTTAGTG+GGG | - | chr7_3:15583437-15583456 | Msa1094230:intron | 65.0% |
| AGGTGACCCGGGTCCAAACC+TGG | - | chr7_3:15584165-15584184 | Msa1094230:intron | 65.0% | |
| GGGGGCCACGTGTACGGTGT+AGG | - | chr7_3:15583411-15583430 | Msa1094230:intron | 70.0% | |
| ! | GGGGGCGTGCTTTAGTGGGG+TGG | - | chr7_3:15583440-15583459 | Msa1094230:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 15582918 | 15587855 | 15582918 | ID=Msa1094230;Name=Msa1094230 |
| chr7_3 | mRNA | 15582918 | 15587855 | 15582918 | ID=Msa1094230-mRNA-1;Parent=Msa1094230;Name=Msa1094230-mRNA-1;_AED=0.00;_eAED=0.00;_QI=68|1|1|1|1|1|2|267|75 |
| chr7_3 | exon | 15582918 | 15583260 | 15582918 | ID=Msa1094230-mRNA-1:exon:3521;Parent=Msa1094230-mRNA-1 |
| chr7_3 | exon | 15587636 | 15587855 | 15587636 | ID=Msa1094230-mRNA-1:exon:3520;Parent=Msa1094230-mRNA-1 |
| chr7_3 | five_prime_UTR | 15587788 | 15587855 | 15587788 | ID=Msa1094230-mRNA-1:five_prime_utr;Parent=Msa1094230-mRNA-1 |
| chr7_3 | CDS | 15587636 | 15587787 | 15587636 | ID=Msa1094230-mRNA-1:cds;Parent=Msa1094230-mRNA-1 |
| chr7_3 | CDS | 15583185 | 15583260 | 15583185 | ID=Msa1094230-mRNA-1:cds;Parent=Msa1094230-mRNA-1 |
| chr7_3 | three_prime_UTR | 15582918 | 15583184 | 15582918 | ID=Msa1094230-mRNA-1:three_prime_utr;Parent=Msa1094230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
