AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0304660


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0304660 MtrunA17_Chr2g0333001 99.320 147 1 0 1 147 1 147 4.02e-106 298
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0304660 AT1G15370.1 87.671 146 18 0 1 146 1 146 1.38e-93 267

Find 54 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTATGACCTATTTAGATTT+TGG 0.153005 2_3:+62008163 None:intergenic
AATGTTAATGCAAGTATTTA+TGG 0.228862 2_3:+62002539 None:intergenic
CCTACACTGGCGTTCTTTCT+TGG 0.246824 2_3:-62005711 Msa0304660:CDS
TAAAGGGTATCTCAGTAATT+TGG 0.251980 2_3:-62008086 Msa0304660:five_prime_UTR
CGCCGTTTCCTTGATAAGTA+TGG 0.286828 2_3:-62003303 Msa0304660:CDS
ACATGAACCAAAATCTAAAT+AGG 0.350628 2_3:-62008170 None:intergenic
CAAAGAGGTTTGCCTGGCTT+TGG 0.366671 2_3:+62002610 None:intergenic
ACTAGGAGCTGATAATCTTA+AGG 0.380283 2_3:-62005684 Msa0304660:CDS
CAAGGAAACGGCGCTCAGTT+GGG 0.381526 2_3:+62003313 None:intergenic
ATGTTAATGCAAGTATTTAT+GGG 0.382157 2_3:+62002540 None:intergenic
TGGAAGAATTTGCTTGTGTT+TGG 0.393493 2_3:-62003283 Msa0304660:CDS
TCTTCTAAGTATATGTTTGT+TGG 0.414106 2_3:-62002386 Msa0304660:intron
CAGTGTAGGCGCTCCTCTGC+AGG 0.428518 2_3:+62005725 None:intergenic
TACAATAACCTCAGCTGTAA+AGG 0.434603 2_3:-62003352 Msa0304660:CDS
CGTTCTTTCTTGGTCAAACT+AGG 0.434756 2_3:-62005701 Msa0304660:CDS
CTAGGAGCTGATAATCTTAA+GGG 0.435141 2_3:-62005683 Msa0304660:CDS
GAAGGGATATCTGGAAAATA+CGG 0.437154 2_3:-62002769 Msa0304660:intron
AAATTCTTCCATACTTATCA+AGG 0.445192 2_3:+62003295 None:intergenic
TGTGTTTGGATGAAATTGTA+TGG 0.456773 2_3:-62003269 Msa0304660:CDS
TCAAGGAAACGGCGCTCAGT+TGG 0.462763 2_3:+62003312 None:intergenic
TTTGTTCTCTAGAATGGTGC+AGG 0.468911 2_3:-62002579 Msa0304660:three_prime_UTR
ATCATACAAAGAGGTTTGCC+TGG 0.471740 2_3:+62002604 None:intergenic
TTCCATACTTATCAAGGAAA+CGG 0.477616 2_3:+62003301 None:intergenic
CTTACTTGTGGCAAGCAACT+AGG 0.484838 2_3:+62005642 None:intergenic
AGCATCTTGTGACTTAGAAA+TGG 0.487141 2_3:-62002640 Msa0304660:three_prime_UTR
GTATCTCAGTAATTTGGAAC+AGG 0.490425 2_3:-62008080 Msa0304660:five_prime_UTR
AAGGAAACGGCGCTCAGTTG+GGG 0.501938 2_3:+62003314 None:intergenic
GAGGATATTGCCCTCGGCGT+TGG 0.506903 2_3:+62007979 None:intergenic
ATTACACTTAATTATGTCAA+AGG 0.508092 2_3:+62008132 None:intergenic
CTCATTCAAAACTCAGTAGG+AGG 0.512002 2_3:+62002711 None:intergenic
ATAGAATCAAGAGATTGATA+AGG 0.521125 2_3:-62002740 Msa0304660:CDS
GATGTCAGTATATACGTTGT+GGG 0.529870 2_3:-62005012 Msa0304660:CDS
TTTCTCATTCAAAACTCAGT+AGG 0.534349 2_3:+62002708 None:intergenic
TCAGCTGTAAAGGATGTATG+TGG 0.535855 2_3:-62003342 Msa0304660:CDS
TATATTGTATACACAGTACT+TGG 0.537335 2_3:-62005036 Msa0304660:CDS
CAGTATATACGTTGTGGGGA+AGG 0.538675 2_3:-62005007 Msa0304660:CDS
AATGGCATGTAACCAAAGCC+AGG 0.551466 2_3:-62002622 Msa0304660:three_prime_UTR
CTGCAGAGGAGCGCCTACAC+TGG 0.552563 2_3:-62005724 Msa0304660:CDS
TTTGGATGAAATTGTATGGA+AGG 0.577163 2_3:-62003265 Msa0304660:intron
TTCGATGAGGATATTGCCCT+CGG 0.588896 2_3:+62007973 None:intergenic
AGATGTCAGTATATACGTTG+TGG 0.591952 2_3:-62005013 Msa0304660:CDS
TCAAACTCAACCTTGCTCAC+CGG 0.594243 2_3:+62008043 None:intergenic
GAACAAAATATCATACAAAG+AGG 0.595753 2_3:+62002595 None:intergenic
CCAAGAAAGAACGCCAGTGT+AGG 0.602222 2_3:+62005711 None:intergenic
TCTCTAGAATGGTGCAGGCG+AGG 0.603839 2_3:-62002574 Msa0304660:three_prime_UTR
ATGTCAGTATATACGTTGTG+GGG 0.608096 2_3:-62005011 Msa0304660:CDS
AGGAAACGGCGCTCAGTTGG+GGG 0.618275 2_3:+62003315 None:intergenic
ACATACATCCTTTACAGCTG+AGG 0.624977 2_3:+62003344 None:intergenic
CAGCTGTAAAGGATGTATGT+GGG 0.637321 2_3:-62003341 Msa0304660:CDS
AGTGTACTCACCGTTCGATG+AGG 0.647564 2_3:+62007960 None:intergenic
GAAAATAAACACATTGCACA+AGG 0.664585 2_3:+62002462 None:intergenic
AAAACGGAATATGATCCTTG+CGG 0.685453 2_3:-62008011 Msa0304660:exon
AGGGCAATATCCTCATCGAA+CGG 0.685734 2_3:-62007970 Msa0304660:intron
AATCTGCAGTTTGAGTCGTG+TGG 0.747932 2_3:-62002665 Msa0304660:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTGAAAAAGAAAATATATAA+AGG - chr2_3:62002407-62002426 Msa0304660:intron 10.0%
!! TGAAAAAGAAAATATATAAA+GGG - chr2_3:62002408-62002427 Msa0304660:intron 10.0%
!! ATTATCATTAATGAAAAATT+TGG - chr2_3:62005203-62005222 Msa0304660:intron 10.0%
!! TTAAATTTATTCAAATAAGA+CGG + chr2_3:62007511-62007530 None:intergenic 10.0%
!! AATAAAAAGATGATAAAATG+AGG + chr2_3:62002619-62002638 None:intergenic 15.0%
!!! GTTTGAAATTTTGATTATAT+TGG - chr2_3:62002682-62002701 Msa0304660:three_prime_UTR 15.0%
!!! TTTTTTTTGTTTTGAAAACT+CGG - chr2_3:62003559-62003578 Msa0304660:intron 15.0%
!!! TATTAAACAGTATTTTATGT+TGG + chr2_3:62004002-62004021 None:intergenic 15.0%
!!! TTTTGACTATGTTTTAATTT+TGG - chr2_3:62004140-62004159 Msa0304660:intron 15.0%
!!! TTTGACTATGTTTTAATTTT+GGG - chr2_3:62004141-62004160 Msa0304660:intron 15.0%
!! TATCCTATTAGAAATAAATA+GGG - chr2_3:62005769-62005788 Msa0304660:intron 15.0%
!! AAATTCTGTAATTGTATTAA+TGG + chr2_3:62006791-62006810 None:intergenic 15.0%
!! TTAAATATGTATACTATTCT+TGG + chr2_3:62006915-62006934 None:intergenic 15.0%
!! ACATATTTAATCAAAAAACA+AGG - chr2_3:62006925-62006944 Msa0304660:intron 15.0%
!!! ATTATGACCTATTTAGATTT+TGG + chr2_3:62002350-62002369 None:intergenic 20.0%
!! ATTACACTTAATTATGTCAA+AGG + chr2_3:62002381-62002400 None:intergenic 20.0%
!! TGAAAACAACTTAAGATTTA+GGG + chr2_3:62002753-62002772 None:intergenic 20.0%
!! ATGAAAACAACTTAAGATTT+AGG + chr2_3:62002754-62002773 None:intergenic 20.0%
!! TAACAAAAGATAAAATGAAG+TGG + chr2_3:62002846-62002865 None:intergenic 20.0%
!! AAAATGTATCATGTATAATC+TGG + chr2_3:62002998-62003017 None:intergenic 20.0%
!! AGGATAATATTAGTAAAGTA+AGG + chr2_3:62003941-62003960 None:intergenic 20.0%
!!! GGATGTTTTTTTTAATTTCA+TGG - chr2_3:62004053-62004072 Msa0304660:intron 20.0%
!! TTTCATGATGTTTAAATTTC+AGG - chr2_3:62004085-62004104 Msa0304660:intron 20.0%
!! AAATGTTGTTAGAAAGTAAA+TGG - chr2_3:62004640-62004659 Msa0304660:intron 20.0%
!! AATAACTAAAATTTAGTCCT+TGG + chr2_3:62005009-62005028 None:intergenic 20.0%
!! TTATTAGAATTCTATTTGCA+AGG - chr2_3:62005024-62005043 Msa0304660:CDS 20.0%
!! TTCATATAAACAGATTTCAA+CGG + chr2_3:62005058-62005077 None:intergenic 20.0%
!!! GACATAATTTTCAAAAATGA+AGG + chr2_3:62005368-62005387 None:intergenic 20.0%
!! TAAATCACTGTTTACTAAAA+GGG + chr2_3:62005416-62005435 None:intergenic 20.0%
!! ATAAATCACTGTTTACTAAA+AGG + chr2_3:62005417-62005436 None:intergenic 20.0%
!!! CAATCTTTTTTATTTGATGA+CGG - chr2_3:62005564-62005583 Msa0304660:intron 20.0%
!!! TTTATTTCTAATAGGATACA+GGG + chr2_3:62005767-62005786 None:intergenic 20.0%
!!! ATTTATTTCTAATAGGATAC+AGG + chr2_3:62005768-62005787 None:intergenic 20.0%
!! GTATCCTATTAGAAATAAAT+AGG - chr2_3:62005768-62005787 Msa0304660:intron 20.0%
!! AGTATTCTATCTTTGTAATT+GGG + chr2_3:62005801-62005820 None:intergenic 20.0%
!! TAGTATTCTATCTTTGTAAT+TGG + chr2_3:62005802-62005821 None:intergenic 20.0%
!!! TTGTTATTTAAGAGAGAATT+GGG + chr2_3:62005863-62005882 None:intergenic 20.0%
!!! ATGTGTTGATTATATTTTGT+TGG - chr2_3:62006077-62006096 Msa0304660:intron 20.0%
!! TTAATGGAAAAACAATTACA+AGG + chr2_3:62006775-62006794 None:intergenic 20.0%
!! ATGTTAATGCAAGTATTTAT+GGG + chr2_3:62007973-62007992 None:intergenic 20.0%
!! AATGTTAATGCAAGTATTTA+TGG + chr2_3:62007974-62007993 None:intergenic 20.0%
!!! TGTTTATTTTCACTCTTTTT+TGG - chr2_3:62008060-62008079 Msa0304660:five_prime_UTR 20.0%
! AGTTTGATATCAGAGAAAAA+CGG - chr2_3:62002483-62002502 Msa0304660:three_prime_UTR 25.0%
!!! GGTTTAGCTTGATTTTTAAT+AGG - chr2_3:62002703-62002722 Msa0304660:exon 25.0%
!! AAAATGAAGTGGAATTGTTT+TGG + chr2_3:62002835-62002854 None:intergenic 25.0%
!!! GCTATTATCATATTAGTCTT+AGG + chr2_3:62002959-62002978 None:intergenic 25.0%
!! GAAGCTTTAATAAAATACCT+TGG + chr2_3:62003430-62003449 None:intergenic 25.0%
! ATTTCTCTTTAATCAGATTG+AGG - chr2_3:62003452-62003471 Msa0304660:intron 25.0%
! TTTCTCTTTAATCAGATTGA+GGG - chr2_3:62003453-62003472 Msa0304660:intron 25.0%
! TCTGATATTTATTGTATCAC+TGG + chr2_3:62003518-62003537 None:intergenic 25.0%
! AAATATCAGAGAATACACTA+TGG - chr2_3:62003528-62003547 Msa0304660:intron 25.0%
!! TTTTCTCTATCGCAATTAAA+AGG - chr2_3:62003700-62003719 Msa0304660:intron 25.0%
! TTTCTCTATCGCAATTAAAA+GGG - chr2_3:62003701-62003720 Msa0304660:intron 25.0%
!!! TGTTTTAATTTCAGTTTGCA+TGG - chr2_3:62004109-62004128 Msa0304660:intron 25.0%
!!! TAATTTTGGGATGTTCTTTT+TGG - chr2_3:62004154-62004173 Msa0304660:intron 25.0%
! AATGATTGATGAATGAATCT+TGG - chr2_3:62004260-62004279 Msa0304660:intron 25.0%
!!! GTTTCTTTTTTGAAAAACAG+TGG - chr2_3:62004484-62004503 Msa0304660:intron 25.0%
!! AATTTTACTTTGTATGTGAG+TGG + chr2_3:62004618-62004637 None:intergenic 25.0%
!! AGTTCTGATAATCAAAAAGT+TGG + chr2_3:62004729-62004748 None:intergenic 25.0%
! GTATGAATGTATATCTTACA+TGG - chr2_3:62004930-62004949 Msa0304660:intron 25.0%
! ATGGATAAATTACCTTATCT+AGG - chr2_3:62004949-62004968 Msa0304660:intron 25.0%
! AAAAATTTGGAAAAGAGTTG+TGG - chr2_3:62005216-62005235 Msa0304660:intron 25.0%
!!! ATCTGTTACTGATTTTTGAT+GGG + chr2_3:62005275-62005294 None:intergenic 25.0%
!!! TATCTGTTACTGATTTTTGA+TGG + chr2_3:62005276-62005295 None:intergenic 25.0%
! TTCTACTTCTTATCTTTATC+AGG - chr2_3:62005445-62005464 Msa0304660:intron 25.0%
! TATATTGTATACACAGTACT+TGG - chr2_3:62005474-62005493 Msa0304660:intron 25.0%
! CGTCATCAAATAAAAAAGAT+TGG + chr2_3:62005566-62005585 None:intergenic 25.0%
!!! TTTTATTTGATGACGGTAAA+TGG - chr2_3:62005571-62005590 Msa0304660:intron 25.0%
!!! TGTCCCTATTTATTTCTAAT+AGG + chr2_3:62005775-62005794 None:intergenic 25.0%
! GTATTCTATCTTTGTAATTG+GGG + chr2_3:62005800-62005819 None:intergenic 25.0%
!! TGTTATTTAAGAGAGAATTG+GGG + chr2_3:62005862-62005881 None:intergenic 25.0%
!!! CTTGTTATTTAAGAGAGAAT+TGG + chr2_3:62005864-62005883 None:intergenic 25.0%
! CAAAATATAATCAACACATC+AGG + chr2_3:62006076-62006095 None:intergenic 25.0%
! AATTCATTTCTAAACGAGAA+TGG + chr2_3:62006324-62006343 None:intergenic 25.0%
!! CTAGTTTATCATCTTTTCTA+GGG + chr2_3:62006350-62006369 None:intergenic 25.0%
! GATGATAAACTAGCTATTAA+AGG - chr2_3:62006357-62006376 Msa0304660:intron 25.0%
! ATATGCTTATTTAAGTGAGA+AGG - chr2_3:62006604-62006623 Msa0304660:intron 25.0%
! ACAAAATAACAAACTGATAG+TGG + chr2_3:62006727-62006746 None:intergenic 25.0%
! AATGGAACAGTGAAATAATA+AGG + chr2_3:62006828-62006847 None:intergenic 25.0%
! AAGTTTAGTTAGATTCTGAT+AGG + chr2_3:62006869-62006888 None:intergenic 25.0%
! ATTTGGAAAAACCTATATGT+TGG - chr2_3:62007050-62007069 Msa0304660:intron 25.0%
! AAATTCTTCCATACTTATCA+AGG + chr2_3:62007218-62007237 None:intergenic 25.0%
!! ATCTTTTAGTAAACATTGTC+CGG + chr2_3:62007283-62007302 None:intergenic 25.0%
! CATAAAATGATGTTTCTCTA+AGG + chr2_3:62007353-62007372 None:intergenic 25.0%
!! AAGTTTTGCATGAAAATATG+GGG + chr2_3:62007577-62007596 None:intergenic 25.0%
!! CAAGTTTTGCATGAAAATAT+GGG + chr2_3:62007578-62007597 None:intergenic 25.0%
! AGATGCAAAAATATACAGAT+TGG + chr2_3:62007642-62007661 None:intergenic 25.0%
! ATAGAATCAAGAGATTGATA+AGG - chr2_3:62007770-62007789 Msa0304660:intron 25.0%
! GAACAAAATATCATACAAAG+AGG + chr2_3:62007918-62007937 None:intergenic 25.0%
!!! TGATATTTTGTTCTCTAGAA+TGG - chr2_3:62007925-62007944 Msa0304660:intron 25.0%
! TCTTCTAAGTATATGTTTGT+TGG - chr2_3:62008124-62008143 Msa0304660:five_prime_UTR 25.0%
!! TAAAGGGTATCTCAGTAATT+TGG - chr2_3:62002424-62002443 Msa0304660:intron 30.0%
TATATAGATCAGAGAGAGAT+CGG + chr2_3:62002576-62002595 None:intergenic 30.0%
TTATACATAAGCGCTTATCA+TGG - chr2_3:62002876-62002895 Msa0304660:intron 30.0%
CAAAATAAGTTGTTTATCCG+AGG - chr2_3:62002907-62002926 Msa0304660:intron 30.0%
TACTAAACATAACATCTCCT+CGG + chr2_3:62002927-62002946 None:intergenic 30.0%
AGACTAATATGATAATAGCC+TGG - chr2_3:62002960-62002979 Msa0304660:intron 30.0%
GACTAATATGATAATAGCCT+GGG - chr2_3:62002961-62002980 Msa0304660:intron 30.0%
! ACTTACAAAGAAGTGCAAAT+GGG + chr2_3:62003229-62003248 None:intergenic 30.0%
! AACTTACAAAGAAGTGCAAA+TGG + chr2_3:62003230-62003249 None:intergenic 30.0%
TGGAACTCTATTCTTATTCT+TGG + chr2_3:62003265-62003284 None:intergenic 30.0%
TATCTGAGAGAACTTAGATT+CGG + chr2_3:62003318-62003337 None:intergenic 30.0%
AAACATTCAAACACAAACCA+AGG - chr2_3:62003410-62003429 Msa0304660:intron 30.0%
TTCTCTTTAATCAGATTGAG+GGG - chr2_3:62003454-62003473 Msa0304660:intron 30.0%
ATGAAACACTAGAAATGAAC+GGG + chr2_3:62003485-62003504 None:intergenic 30.0%
CATGAAACACTAGAAATGAA+CGG + chr2_3:62003486-62003505 None:intergenic 30.0%
TCAAAATCCATATCACATGT+AGG - chr2_3:62003728-62003747 Msa0304660:intron 30.0%
CAAAATCCATATCACATGTA+GGG - chr2_3:62003729-62003748 Msa0304660:intron 30.0%
AAAATCCATATCACATGTAG+GGG - chr2_3:62003730-62003749 Msa0304660:intron 30.0%
!!! AACAAGGTCGGATATTTTTT+CGG + chr2_3:62003808-62003827 None:intergenic 30.0%
AAAAAATATCCGACCTTGTT+TGG - chr2_3:62003808-62003827 Msa0304660:intron 30.0%
TATTAGTAAAGTAAGGAGTG+TGG + chr2_3:62003934-62003953 None:intergenic 30.0%
AGAAACCGAACCAAATTAAT+CGG + chr2_3:62004470-62004489 None:intergenic 30.0%
! TGTTAGAAAGTAAATGGACT+TGG - chr2_3:62004646-62004665 Msa0304660:intron 30.0%
!! TTTTGATTATCAGAACTGAG+TGG - chr2_3:62004732-62004751 Msa0304660:intron 30.0%
! TGTTATGATTGCAGTTTTCA+TGG - chr2_3:62004758-62004777 Msa0304660:intron 30.0%
AACTTTATCTGATTCTGAAC+TGG - chr2_3:62004982-62005001 Msa0304660:intron 30.0%
AATTCTATTTGCAAGGTTAG+TGG - chr2_3:62005031-62005050 Msa0304660:CDS 30.0%
ATTCTATTTGCAAGGTTAGT+GGG - chr2_3:62005032-62005051 Msa0304660:CDS 30.0%
GATAGAATACTACAGAACTT+CGG - chr2_3:62005810-62005829 Msa0304660:intron 30.0%
!! CAACCACTCTTGTTATTTAT+AGG - chr2_3:62005898-62005917 Msa0304660:intron 30.0%
TTGCCTATAAATAACAAGAG+TGG + chr2_3:62005904-62005923 None:intergenic 30.0%
AATATAATCAACACATCAGG+AGG + chr2_3:62006073-62006092 None:intergenic 30.0%
TAACAGAGAAGAATCAAACT+TGG + chr2_3:62006111-62006130 None:intergenic 30.0%
ATTAAGGCAATAGATCGAAA+AGG + chr2_3:62006264-62006283 None:intergenic 30.0%
AGAGAAGCTTGCAAAAATTA+AGG + chr2_3:62006280-62006299 None:intergenic 30.0%
!! GCTAGTTTATCATCTTTTCT+AGG + chr2_3:62006351-62006370 None:intergenic 30.0%
! TTAGCTTTCTGTTATTTGTG+TGG - chr2_3:62006646-62006665 Msa0304660:intron 30.0%
! TAGCTTTCTGTTATTTGTGT+GGG - chr2_3:62006647-62006666 Msa0304660:intron 30.0%
CAGAATCTAACTAAACTTAG+CGG - chr2_3:62006871-62006890 Msa0304660:intron 30.0%
TCGTTCATATTGTGATTTGA+TGG - chr2_3:62006952-62006971 Msa0304660:intron 30.0%
!! AGCATATTGTTATTTCACCA+AGG - chr2_3:62007014-62007033 Msa0304660:intron 30.0%
!! GCATATTGTTATTTCACCAA+GGG - chr2_3:62007015-62007034 Msa0304660:intron 30.0%
AAATTGCAATTTCAAACCCT+TGG + chr2_3:62007034-62007053 None:intergenic 30.0%
! AAGGGTTTGAAATTGCAATT+TGG - chr2_3:62007033-62007052 Msa0304660:intron 30.0%
TTCCATACTTATCAAGGAAA+CGG + chr2_3:62007212-62007231 None:intergenic 30.0%
TGTGTTTGGATGAAATTGTA+TGG - chr2_3:62007241-62007260 Msa0304660:intron 30.0%
TTTGGATGAAATTGTATGGA+AGG - chr2_3:62007245-62007264 Msa0304660:intron 30.0%
! AGTATCGTTTCAAGTGAATT+GGG + chr2_3:62007488-62007507 None:intergenic 30.0%
! CCAAGTTTTGCATGAAAATA+TGG + chr2_3:62007579-62007598 None:intergenic 30.0%
! CCATATTTTCATGCAAAACT+TGG - chr2_3:62007576-62007595 Msa0304660:intron 30.0%
! TTTCCCTGTATTTCTTTTGA+AGG - chr2_3:62007723-62007742 Msa0304660:intron 30.0%
! TTCCCTGTATTTCTTTTGAA+GGG - chr2_3:62007724-62007743 Msa0304660:intron 30.0%
ATCCCTTCAAAAGAAATACA+GGG + chr2_3:62007729-62007748 None:intergenic 30.0%
TATCCCTTCAAAAGAAATAC+AGG + chr2_3:62007730-62007749 None:intergenic 30.0%
!! ATTTCTTTTGAAGGGATATC+TGG - chr2_3:62007732-62007751 Msa0304660:intron 30.0%
TTTCTCATTCAAAACTCAGT+AGG + chr2_3:62007805-62007824 None:intergenic 30.0%
!! GTTTTGAATGAGAAATTCTG+AGG - chr2_3:62007810-62007829 Msa0304660:intron 30.0%
GAAAATAAACACATTGCACA+AGG + chr2_3:62008051-62008070 None:intergenic 30.0%
! GTATCTCAGTAATTTGGAAC+AGG - chr2_3:62002430-62002449 Msa0304660:intron 35.0%
! ACAGGTGATTTTTACAACTC+CGG - chr2_3:62002448-62002467 Msa0304660:three_prime_UTR 35.0%
AAAACGGAATATGATCCTTG+CGG - chr2_3:62002499-62002518 Msa0304660:three_prime_UTR 35.0%
! TTTCAGCGTTTTCTTTGATC+TGG - chr2_3:62002654-62002673 Msa0304660:three_prime_UTR 35.0%
!!! ATCTGGTTTTCTAATTTCCC+AGG + chr2_3:62002981-62003000 None:intergenic 35.0%
! TACCTAGGCTTTATCTGATA+GGG + chr2_3:62003071-62003090 None:intergenic 35.0%
! TTACCTAGGCTTTATCTGAT+AGG + chr2_3:62003072-62003091 None:intergenic 35.0%
! CTTACAAAGAAGTGCAAATG+GGG + chr2_3:62003228-62003247 None:intergenic 35.0%
GAATCTAAGTTCTCTCAGAT+AGG - chr2_3:62003317-62003336 Msa0304660:CDS 35.0%
TTGAAAACTCGGCAACATTA+TGG - chr2_3:62003570-62003589 Msa0304660:intron 35.0%
! GAATGCATTTTCAGAAACAC+TGG + chr2_3:62003661-62003680 None:intergenic 35.0%
GAAAAGATAGAAGCTACCTA+GGG + chr2_3:62003685-62003704 None:intergenic 35.0%
AGAAAAGATAGAAGCTACCT+AGG + chr2_3:62003686-62003705 None:intergenic 35.0%
!! GTTTAGACTATCGGTTTCAT+TGG + chr2_3:62003776-62003795 None:intergenic 35.0%
ATGAAACCGATAGTCTAAAC+CGG - chr2_3:62003776-62003795 Msa0304660:intron 35.0%
!!! GATATTTTTTCGGTTTGGTC+CGG + chr2_3:62003798-62003817 None:intergenic 35.0%
!! TAGACTGGTTTCAATTGGTT+CGG + chr2_3:62003851-62003870 None:intergenic 35.0%
!! CAAACTAGACTGGTTTCAAT+TGG + chr2_3:62003856-62003875 None:intergenic 35.0%
CAATTGAAACCAGTCTAGTT+TGG - chr2_3:62003854-62003873 Msa0304660:intron 35.0%
!! TTATCATCGGATTGGTTCAT+CGG + chr2_3:62003911-62003930 None:intergenic 35.0%
TCTAACCATAAGTTTGTGTG+AGG + chr2_3:62003965-62003984 None:intergenic 35.0%
ACATTCACTTTCTCTCATCT+TGG - chr2_3:62004021-62004040 Msa0304660:intron 35.0%
CTCTCATCTTGGATTTAGTT+TGG - chr2_3:62004032-62004051 Msa0304660:intron 35.0%
! GTTGATGAATGATGCATGTA+TGG - chr2_3:62004190-62004209 Msa0304660:intron 35.0%
AATGATGCATGTATGGATCA+TGG - chr2_3:62004197-62004216 Msa0304660:intron 35.0%
!! CCAAATTAATCGGTTTGGTT+CGG + chr2_3:62004460-62004479 None:intergenic 35.0%
! CCAAACCGATTAATTTGGTT+CGG - chr2_3:62004462-62004481 Msa0304660:intron 35.0%
!! ACTTGGAACTTTTTCTTGTG+TGG - chr2_3:62004663-62004682 Msa0304660:intron 35.0%
ACTAGGAGCTGATAATCTTA+AGG - chr2_3:62004826-62004845 Msa0304660:intron 35.0%
CTAGGAGCTGATAATCTTAA+GGG - chr2_3:62004827-62004846 Msa0304660:intron 35.0%
AAGAGCAGTATACTTACTTG+TGG + chr2_3:62004883-62004902 None:intergenic 35.0%
! TTAAAGTGCTCACCTAGATA+AGG + chr2_3:62004964-62004983 None:intergenic 35.0%
TTGGAAAAGAGTTGTGGAAA+TGG - chr2_3:62005222-62005241 Msa0304660:intron 35.0%
AGATGTCAGTATATACGTTG+TGG - chr2_3:62005497-62005516 Msa0304660:intron 35.0%
GATGTCAGTATATACGTTGT+GGG - chr2_3:62005498-62005517 Msa0304660:intron 35.0%
ATGTCAGTATATACGTTGTG+GGG - chr2_3:62005499-62005518 Msa0304660:intron 35.0%
AATAACAAGAGTGGTTGAGA+GGG + chr2_3:62005895-62005914 None:intergenic 35.0%
AAATAACAAGAGTGGTTGAG+AGG + chr2_3:62005896-62005915 None:intergenic 35.0%
GGTAACAAGATTAGGTAGTT+CGG + chr2_3:62005954-62005973 None:intergenic 35.0%
! ATTGTTGATGAAAGGACTGT+TGG + chr2_3:62005975-62005994 None:intergenic 35.0%
AGTCCTTTCATCAACAATGT+AGG - chr2_3:62005977-62005996 Msa0304660:intron 35.0%
! GAACCTACATTGTTGATGAA+AGG + chr2_3:62005983-62006002 None:intergenic 35.0%
!!! GGACACTAGTTTTATGGTAT+GGG + chr2_3:62006219-62006238 None:intergenic 35.0%
!!! TGGACACTAGTTTTATGGTA+TGG + chr2_3:62006220-62006239 None:intergenic 35.0%
TCATTTCTAAACGAGAATGG+TGG + chr2_3:62006321-62006340 None:intergenic 35.0%
GCTATTAAAGGATACTCTTG+CGG - chr2_3:62006369-62006388 Msa0304660:intron 35.0%
TGATAGAGATGTGAATCAAG+TGG - chr2_3:62006477-62006496 Msa0304660:intron 35.0%
ATTTAAGTGAGAAGGATCAG+AGG - chr2_3:62006612-62006631 Msa0304660:intron 35.0%
TTTAAGTGAGAAGGATCAGA+GGG - chr2_3:62006613-62006632 Msa0304660:intron 35.0%
! AGCTTTCTGTTATTTGTGTG+GGG - chr2_3:62006648-62006667 Msa0304660:intron 35.0%
TCACTAGTTGAGTGATTTCT+TGG - chr2_3:62006671-62006690 Msa0304660:intron 35.0%
CACTAGTTGAGTGATTTCTT+GGG - chr2_3:62006672-62006691 Msa0304660:intron 35.0%
ACTAGTTGAGTGATTTCTTG+GGG - chr2_3:62006673-62006692 Msa0304660:intron 35.0%
TGTGTGTGTGATTTGATGAA+TGG + chr2_3:62006846-62006865 None:intergenic 35.0%
AACAATATGCTTGAGTCACT+CGG + chr2_3:62007005-62007024 None:intergenic 35.0%
TTGACAGCTTACCAACATAT+AGG + chr2_3:62007064-62007083 None:intergenic 35.0%
!!! GTTTTGTTTTTCTCCAGTGT+CGG - chr2_3:62007125-62007144 Msa0304660:intron 35.0%
TACAATAACCTCAGCTGTAA+AGG - chr2_3:62007158-62007177 Msa0304660:intron 35.0%
! TGGAAGAATTTGCTTGTGTT+TGG - chr2_3:62007227-62007246 Msa0304660:intron 35.0%
! GAGTATCGTTTCAAGTGAAT+TGG + chr2_3:62007489-62007508 None:intergenic 35.0%
GAAGGGATATCTGGAAAATA+CGG - chr2_3:62007741-62007760 Msa0304660:intron 35.0%
AGCATCTTGTGACTTAGAAA+TGG - chr2_3:62007870-62007889 Msa0304660:intron 35.0%
! ACCTAGGCTTTATCTGATAG+GGG + chr2_3:62003070-62003089 None:intergenic 40.0%
! GCTTGTTAGTCAAGCTTTGA+AGG - chr2_3:62003146-62003165 Msa0304660:intron 40.0%
AGTTCGCAACTTAGCTTAAG+TGG + chr2_3:62003285-62003304 None:intergenic 40.0%
TCTGAAAATGCATTCTCCCT+AGG - chr2_3:62003666-62003685 Msa0304660:intron 40.0%
TTACACCCCTACATGTGATA+TGG + chr2_3:62003738-62003757 None:intergenic 40.0%
TTTGGTCCGGTTTAGACTAT+CGG + chr2_3:62003785-62003804 None:intergenic 40.0%
!!! GGTCGGATATTTTTTCGGTT+TGG + chr2_3:62003803-62003822 None:intergenic 40.0%
! ATATCCGACCTTGTTTGGTT+CGG - chr2_3:62003813-62003832 Msa0304660:intron 40.0%
GTTTCAAACCGAACCAAACA+AGG + chr2_3:62003824-62003843 None:intergenic 40.0%
!! TGGTTTCAATTGGTTCGGAT+CGG + chr2_3:62003846-62003865 None:intergenic 40.0%
! AACCAGTCTAGTTTGGTTCA+TGG - chr2_3:62003861-62003880 Msa0304660:intron 40.0%
AACCATGAACCAAACTAGAC+TGG + chr2_3:62003866-62003885 None:intergenic 40.0%
! GTAAGGAGTGTGGTTATCAT+CGG + chr2_3:62003924-62003943 None:intergenic 40.0%
TCCTACCTCACACAAACTTA+TGG - chr2_3:62003957-62003976 Msa0304660:intron 40.0%
ACCATAAGTTTGTGTGAGGT+AGG + chr2_3:62003961-62003980 None:intergenic 40.0%
!! TTTGGATTGGTTCGGTTGAT+CGG + chr2_3:62004437-62004456 None:intergenic 40.0%
!! TTAATCGGTTTGGTTCGGTT+TGG + chr2_3:62004455-62004474 None:intergenic 40.0%
CCGAACCAAACCGATTAATT+TGG - chr2_3:62004457-62004476 Msa0304660:intron 40.0%
CCGAACCAAATTAATCGGTT+TGG + chr2_3:62004465-62004484 None:intergenic 40.0%
!!! CATCGGTTCGGACATTTTTT+TGG - chr2_3:62004538-62004557 Msa0304660:intron 40.0%
TGTAACGGTTCAGTTTGGAT+TGG + chr2_3:62004572-62004591 None:intergenic 40.0%
TTACTTTGTATGTGAGTGGC+TGG + chr2_3:62004614-62004633 None:intergenic 40.0%
CCAAGTATCTTCTACAATGC+AGG + chr2_3:62004704-62004723 None:intergenic 40.0%
CCTGCATTGTAGAAGATACT+TGG - chr2_3:62004701-62004720 Msa0304660:intron 40.0%
CGTTCTTTCTTGGTCAAACT+AGG - chr2_3:62004809-62004828 Msa0304660:intron 40.0%
CAGTAACAGATACAAGATCG+TGG - chr2_3:62005284-62005303 Msa0304660:intron 40.0%
AAGAGAGAATTGGGGACTTT+GGG + chr2_3:62005854-62005873 None:intergenic 40.0%
TAAGAGAGAATTGGGGACTT+TGG + chr2_3:62005855-62005874 None:intergenic 40.0%
!! GGACTGTTGGTAACAAGATT+AGG + chr2_3:62005962-62005981 None:intergenic 40.0%
AAGAATCAGAACTGCAGACA+AGG + chr2_3:62006022-62006041 None:intergenic 40.0%
! TTGTCTGCAGTTCTGATTCT+TGG - chr2_3:62006021-62006040 Msa0304660:intron 40.0%
TTCTCCTCATGCTGTCAATT+GGG - chr2_3:62006159-62006178 Msa0304660:intron 40.0%
!!! GTGGATGGACACTAGTTTTA+TGG + chr2_3:62006225-62006244 None:intergenic 40.0%
!! AAACGAGAATGGTGGATTGA+GGG + chr2_3:62006313-62006332 None:intergenic 40.0%
!! TAAACGAGAATGGTGGATTG+AGG + chr2_3:62006314-62006333 None:intergenic 40.0%
! CTCTTGCGGTGTTGAAAATA+TGG - chr2_3:62006383-62006402 Msa0304660:intron 40.0%
AGTGAGAAAAGCTAGCTATC+AGG - chr2_3:62006426-62006445 Msa0304660:intron 40.0%
TAGCTATCAGGTGAACTAGT+AGG - chr2_3:62006438-62006457 Msa0304660:intron 40.0%
AGCTATCAGGTGAACTAGTA+GGG - chr2_3:62006439-62006458 Msa0304660:intron 40.0%
TAGAGATGTGAATCAAGTGG+TGG - chr2_3:62006480-62006499 Msa0304660:intron 40.0%
ATGTAGACCCTCCAAATCTT+TGG + chr2_3:62006526-62006545 None:intergenic 40.0%
AGGGTCTACATGAGAAAGAA+GGG - chr2_3:62006535-62006554 Msa0304660:intron 40.0%
! AATGATGACGTGGCTACTAA+AGG - chr2_3:62006574-62006593 Msa0304660:intron 40.0%
! ATGATGACGTGGCTACTAAA+GGG - chr2_3:62006575-62006594 Msa0304660:intron 40.0%
ACATACATCCTTTACAGCTG+AGG + chr2_3:62007169-62007188 None:intergenic 40.0%
TCAGCTGTAAAGGATGTATG+TGG - chr2_3:62007168-62007187 Msa0304660:intron 40.0%
CAGCTGTAAAGGATGTATGT+GGG - chr2_3:62007169-62007188 Msa0304660:intron 40.0%
AAACTCCTCTTTCGCAACAA+TGG + chr2_3:62007681-62007700 None:intergenic 40.0%
CTCATTCAAAACTCAGTAGG+AGG + chr2_3:62007802-62007821 None:intergenic 40.0%
ATCATACAAAGAGGTTTGCC+TGG + chr2_3:62007909-62007928 None:intergenic 40.0%
!! TTTGTTCTCTAGAATGGTGC+AGG - chr2_3:62007931-62007950 Msa0304660:intron 40.0%
! TTTTACAACTCCGGTGAGCA+AGG - chr2_3:62002457-62002476 Msa0304660:three_prime_UTR 45.0%
TCAAACTCAACCTTGCTCAC+CGG + chr2_3:62002470-62002489 None:intergenic 45.0%
TTCGATGAGGATATTGCCCT+CGG + chr2_3:62002540-62002559 None:intergenic 45.0%
AGGGCAATATCCTCATCGAA+CGG - chr2_3:62002540-62002559 Msa0304660:three_prime_UTR 45.0%
AAGTCTAGTGCGCTTTACCT+AGG + chr2_3:62003086-62003105 None:intergenic 45.0%
TAGGTAAAGCGCACTAGACT+TGG - chr2_3:62003085-62003104 Msa0304660:intron 45.0%
GCAATGTAAGCTGCAAGCTT+AGG - chr2_3:62003176-62003195 Msa0304660:intron 45.0%
! ATCACATGTAGGGGTGTAAG+CGG - chr2_3:62003739-62003758 Msa0304660:intron 45.0%
CAAACCGAACCAAACAAGGT+CGG + chr2_3:62003820-62003839 None:intergenic 45.0%
!! GGATTGGTTCATCGGTTTCA+CGG + chr2_3:62003903-62003922 None:intergenic 45.0%
GAGTGTGGTTATCATCGGAT+TGG + chr2_3:62003919-62003938 None:intergenic 45.0%
!! TGGTTCGGTTTGGATTGGTT+CGG + chr2_3:62004445-62004464 None:intergenic 45.0%
!! TTCATCGGTTCGGTTTGGTT+CGG + chr2_3:62004513-62004532 None:intergenic 45.0%
!! AAACCTTCATCGGTTCGGTT+TGG + chr2_3:62004518-62004537 None:intergenic 45.0%
! CGATGAAACCTTCATCGGTT+CGG + chr2_3:62004523-62004542 None:intergenic 45.0%
CGAACCGATGAAGGTTTCAT+CGG - chr2_3:62004521-62004540 Msa0304660:intron 45.0%
CGAACCGATGAAACCTTCAT+CGG + chr2_3:62004528-62004547 None:intergenic 45.0%
! CGATGAAGGTTTCATCGGTT+CGG - chr2_3:62004526-62004545 Msa0304660:intron 45.0%
! ACATGGGATTAGGGGTGTAA+CGG + chr2_3:62004587-62004606 None:intergenic 45.0%
CTGGAATGACATGGGATTAG+GGG + chr2_3:62004595-62004614 None:intergenic 45.0%
GCTGGAATGACATGGGATTA+GGG + chr2_3:62004596-62004615 None:intergenic 45.0%
! TTTTCATGGAGTTCCTGCAG+AGG - chr2_3:62004772-62004791 Msa0304660:intron 45.0%
CTTACTTGTGGCAAGCAACT+AGG + chr2_3:62004871-62004890 None:intergenic 45.0%
ACGTACACATGACTTGAGAG+AGG + chr2_3:62004907-62004926 None:intergenic 45.0%
TCTGATTCTGAACTGGTCCA+AGG - chr2_3:62004989-62005008 Msa0304660:CDS 45.0%
CAGTATATACGTTGTGGGGA+AGG - chr2_3:62005503-62005522 Msa0304660:intron 45.0%
CTTCTCCTCATGCTGTCAAT+TGG - chr2_3:62006158-62006177 Msa0304660:intron 45.0%
GCAGGATGGACAAGATTCTA+GGG + chr2_3:62006187-62006206 None:intergenic 45.0%
TGCAGGATGGACAAGATTCT+AGG + chr2_3:62006188-62006207 None:intergenic 45.0%
ATGGGAAATACTGTGCAGGA+TGG + chr2_3:62006201-62006220 None:intergenic 45.0%
TGGTATGGGAAATACTGTGC+AGG + chr2_3:62006205-62006224 None:intergenic 45.0%
AACAGAGCAACAGTTGTGGA+TGG + chr2_3:62006240-62006259 None:intergenic 45.0%
AGGAAACAGAGCAACAGTTG+TGG + chr2_3:62006244-62006263 None:intergenic 45.0%
!! AACGAGAATGGTGGATTGAG+GGG + chr2_3:62006312-62006331 None:intergenic 45.0%
GCTATCAGGTGAACTAGTAG+GGG - chr2_3:62006440-62006459 Msa0304660:intron 45.0%
!! AAGTGGTGGACATTGACAGT+GGG - chr2_3:62006494-62006513 Msa0304660:intron 45.0%
! ACCCTCCAAATCTTTGGCTT+GGG + chr2_3:62006520-62006539 None:intergenic 45.0%
GAGGGTCTACATGAGAAAGA+AGG - chr2_3:62006534-62006553 Msa0304660:intron 45.0%
GTCTACATGAGAAAGAAGGG+AGG - chr2_3:62006538-62006557 Msa0304660:intron 45.0%
ATGAGAAAGAAGGGAGGACA+AGG - chr2_3:62006544-62006563 Msa0304660:intron 45.0%
! AGGCAAAAGGAATGATGACG+TGG - chr2_3:62006564-62006583 Msa0304660:intron 45.0%
!! TTGTTTTTCTCCAGTGTCGG+AGG - chr2_3:62007128-62007147 Msa0304660:intron 45.0%
GTAAAGATAACCTCCGACAC+TGG + chr2_3:62007141-62007160 None:intergenic 45.0%
CGCCGTTTCCTTGATAAGTA+TGG - chr2_3:62007207-62007226 Msa0304660:intron 45.0%
CTTTCGCAACAATGGAACAG+AGG + chr2_3:62007673-62007692 None:intergenic 45.0%
CTGTTCCATTGTTGCGAAAG+AGG - chr2_3:62007673-62007692 Msa0304660:intron 45.0%
AATCTGCAGTTTGAGTCGTG+TGG - chr2_3:62007845-62007864 Msa0304660:intron 45.0%
AATGGCATGTAACCAAAGCC+AGG - chr2_3:62007888-62007907 Msa0304660:intron 45.0%
AGTGTACTCACCGTTCGATG+AGG + chr2_3:62002553-62002572 None:intergenic 50.0%
TCTGATAGGGGCTACCATTG+CGG + chr2_3:62003058-62003077 None:intergenic 50.0%
GCCCCTATCAGATAAAGCCT+AGG - chr2_3:62003066-62003085 Msa0304660:intron 50.0%
TGGAGATTCGTGCATCCTCT+CGG - chr2_3:62003105-62003124 Msa0304660:intron 50.0%
CTGCAAGCTTAGGCTTTCTC+CGG - chr2_3:62003186-62003205 Msa0304660:intron 50.0%
GGGAGTCTATATCAGCTGAC+CGG + chr2_3:62003208-62003227 None:intergenic 50.0%
! ATGTAGGGGTGTAAGCGGTT+CGG - chr2_3:62003744-62003763 Msa0304660:intron 50.0%
!! CGGTTTGGTTCGGTTTGGAT+TGG + chr2_3:62004450-62004469 None:intergenic 50.0%
GAACCAAACCGAACCGATGA+AGG - chr2_3:62004512-62004531 Msa0304660:intron 50.0%
! AGGGGTGTAACGGTTCAGTT+TGG + chr2_3:62004577-62004596 None:intergenic 50.0%
GGCTGGAATGACATGGGATT+AGG + chr2_3:62004597-62004616 None:intergenic 50.0%
GTGAGTGGCTGGAATGACAT+GGG + chr2_3:62004603-62004622 None:intergenic 50.0%
TGTGAGTGGCTGGAATGACA+TGG + chr2_3:62004604-62004623 None:intergenic 50.0%
CCAAGAAAGAACGCCAGTGT+AGG + chr2_3:62004802-62004821 None:intergenic 50.0%
CCTACACTGGCGTTCTTTCT+TGG - chr2_3:62004799-62004818 Msa0304660:intron 50.0%
ATTGTTGTGCCTAGCACCTG+TGG - chr2_3:62006130-62006149 Msa0304660:intron 50.0%
ATGAGGAGAAGCAAAGCCAC+AGG + chr2_3:62006149-62006168 None:intergenic 50.0%
GGAACCCAATTGACAGCATG+AGG + chr2_3:62006166-62006185 None:intergenic 50.0%
!! CAAGTGGTGGACATTGACAG+TGG - chr2_3:62006493-62006512 Msa0304660:intron 50.0%
GCCCAAGCCAAAGATTTGGA+GGG - chr2_3:62006516-62006535 Msa0304660:intron 50.0%
GACCCTCCAAATCTTTGGCT+TGG + chr2_3:62006521-62006540 None:intergenic 50.0%
AGAAGGGAGGACAAGGCAAA+AGG - chr2_3:62006551-62006570 Msa0304660:intron 50.0%
TGCTTGAGTCACTCGGCAAT+TGG + chr2_3:62006998-62007017 None:intergenic 50.0%
TGGAAGGTGAGAAGACATGC+CGG - chr2_3:62007261-62007280 Msa0304660:intron 50.0%
CAAAGAGGTTTGCCTGGCTT+TGG + chr2_3:62007903-62007922 None:intergenic 50.0%
!! CGTTGGCAAAAAGCACCGCA+AGG + chr2_3:62002517-62002536 None:intergenic 55.0%
!! GTGCTTTTTGCCAACGCCGA+GGG - chr2_3:62002521-62002540 Msa0304660:three_prime_UTR 55.0%
ATCTCACTCTCGACCCGCAA+TGG - chr2_3:62003041-62003060 Msa0304660:intron 55.0%
CTGATAGGGGCTACCATTGC+GGG + chr2_3:62003057-62003076 None:intergenic 55.0%
ATTCGTGCATCCTCTCGGAG+AGG - chr2_3:62003110-62003129 Msa0304660:intron 55.0%
TTCGTGCATCCTCTCGGAGA+GGG - chr2_3:62003111-62003130 Msa0304660:intron 55.0%
AGAGTTTGTCCCTCTCCGAG+AGG + chr2_3:62003123-62003142 None:intergenic 55.0%
!! GTCAAGCTTTGAAGGTGCCG+CGG - chr2_3:62003154-62003173 Msa0304660:intron 55.0%
GCTTGCAGCTTACATTGCCG+CGG + chr2_3:62003174-62003193 None:intergenic 55.0%
GAAGCAAAGCCACAGGTGCT+AGG + chr2_3:62006142-62006161 None:intergenic 55.0%
GTGGGCCCAAGCCAAAGATT+TGG - chr2_3:62006512-62006531 Msa0304660:intron 55.0%
GGCCCAAGCCAAAGATTTGG+AGG - chr2_3:62006515-62006534 Msa0304660:intron 55.0%
AAGGAAACGGCGCTCAGTTG+GGG + chr2_3:62007199-62007218 None:intergenic 55.0%
CAAGGAAACGGCGCTCAGTT+GGG + chr2_3:62007200-62007219 None:intergenic 55.0%
TCAAGGAAACGGCGCTCAGT+TGG + chr2_3:62007201-62007220 None:intergenic 55.0%
!! TCTCTAGAATGGTGCAGGCG+AGG - chr2_3:62007936-62007955 Msa0304660:intron 55.0%
! GTGCAGGCGAGGATTTTGCT+CGG - chr2_3:62007947-62007966 Msa0304660:intron 55.0%
!! GGTGCTTTTTGCCAACGCCG+AGG - chr2_3:62002520-62002539 Msa0304660:three_prime_UTR 60.0%
GAGGATATTGCCCTCGGCGT+TGG + chr2_3:62002534-62002553 None:intergenic 60.0%
!! TTGGGGAGCACTGCGTGCTT+GGG - chr2_3:62006690-62006709 Msa0304660:intron 60.0%
AGGAAACGGCGCTCAGTTGG+GGG + chr2_3:62007198-62007217 None:intergenic 60.0%
CAGTGTAGGCGCTCCTCTGC+AGG + chr2_3:62004788-62004807 None:intergenic 65.0%
!! CTGCAGAGGAGCGCCTACAC+TGG - chr2_3:62004786-62004805 Msa0304660:intron 65.0%
!! CTTGGGGAGCACTGCGTGCT+TGG - chr2_3:62006689-62006708 Msa0304660:intron 65.0%
!! TGGGGAGCACTGCGTGCTTG+GGG - chr2_3:62006691-62006710 Msa0304660:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 62002347 62008185 62002347 ID=Msa0304660;Name=Msa0304660
chr2_3 mRNA 62002347 62008185 62002347 ID=Msa0304660-mRNA-1;Parent=Msa0304660;Name=Msa0304660-mRNA-1;_AED=0.03;_eAED=0.03;_QI=162|1|1|1|0.8|0.66|6|333|147
chr2_3 exon 62002347 62002400 62002347 ID=Msa0304660-mRNA-1:exon:20656;Parent=Msa0304660-mRNA-1
chr2_3 exon 62002437 62002787 62002437 ID=Msa0304660-mRNA-1:exon:20655;Parent=Msa0304660-mRNA-1
chr2_3 exon 62003266 62003390 62003266 ID=Msa0304660-mRNA-1:exon:20654;Parent=Msa0304660-mRNA-1
chr2_3 exon 62004986 62005065 62004986 ID=Msa0304660-mRNA-1:exon:20653;Parent=Msa0304660-mRNA-1
chr2_3 exon 62005647 62005760 62005647 ID=Msa0304660-mRNA-1:exon:20652;Parent=Msa0304660-mRNA-1
chr2_3 exon 62007971 62008185 62007971 ID=Msa0304660-mRNA-1:exon:20651;Parent=Msa0304660-mRNA-1
chr2_3 five_prime_UTR 62008024 62008185 62008024 ID=Msa0304660-mRNA-1:five_prime_utr;Parent=Msa0304660-mRNA-1
chr2_3 CDS 62007971 62008023 62007971 ID=Msa0304660-mRNA-1:cds;Parent=Msa0304660-mRNA-1
chr2_3 CDS 62005647 62005760 62005647 ID=Msa0304660-mRNA-1:cds;Parent=Msa0304660-mRNA-1
chr2_3 CDS 62004986 62005065 62004986 ID=Msa0304660-mRNA-1:cds;Parent=Msa0304660-mRNA-1
chr2_3 CDS 62003266 62003390 62003266 ID=Msa0304660-mRNA-1:cds;Parent=Msa0304660-mRNA-1
chr2_3 CDS 62002716 62002787 62002716 ID=Msa0304660-mRNA-1:cds;Parent=Msa0304660-mRNA-1
chr2_3 three_prime_UTR 62002437 62002715 62002437 ID=Msa0304660-mRNA-1:three_prime_utr;Parent=Msa0304660-mRNA-1
chr2_3 three_prime_UTR 62002347 62002400 62002347 ID=Msa0304660-mRNA-1:three_prime_utr;Parent=Msa0304660-mRNA-1
Gene Sequence

>Msa0304660

ATGATCCTTGCGGTGCTTTTTGCCAACGCCGAGGGCAATATCCTCATCGAACGTTTTCATGGAGTTCCTGCAGAGGAGCGCCTACACTGGCGTTCTTTCTTGGTCAAACTAGGAGCTGATAATCTTAAGGGTGTAAAAAATGAAGAACTCCTAGTTGCTTGCCACAAGTCAGTCTATATTGTATACACAGTACTTGGAGATGTCAGTATATACGTTGTGGGGAAGGACGCGTACGATGAACTTGCTTTGTCGGAGGTTATCTTTACAATAACCTCAGCTGTAAAGGATGTATGTGGGAAGCCCCCAACTGAGCGCCGTTTCCTTGATAAGTATGGAAGAATTTGCTTGTGTTTGGATGAAATTGTATGGAAGGGATATCTGGAAAATACGGAAAAAGATAGAATCAAGAGATTGATAAGGTTGAAGCCTCCTACTGAGTTTTGA

Protein sequence

>Msa0304660

MILAVLFANAEGNILIERFHGVPAEERLHWRSFLVKLGADNLKGVKNEELLVACHKSVYIVYTVLGDVSIYVVGKDAYDELALSEVIFTITSAVKDVCGKPPTERRFLDKYGRICLCLDEIVWKGYLENTEKDRIKRLIRLKPPTEF*