Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423860 | KEH35357.1 | 97.484 | 159 | 4 | 0 | 1 | 159 | 1 | 159 | 1.02e-103 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423860 | sp|Q9LPK5|CML44_ARATH | 43.226 | 155 | 82 | 3 | 2 | 155 | 4 | 153 | 8.79e-35 | 122 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423860 | A0A072V0Q8 | 97.484 | 159 | 4 | 0 | 1 | 159 | 1 | 159 | 4.86e-104 | 303 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0423860 | 0.805003 | 1.646488e-49 | -8.615850e-47 |
| Msa0007990 | Msa0423860 | 0.823163 | 1.605575e-53 | -8.615850e-47 |
| Msa0022000 | Msa0423860 | 0.800254 | 1.570725e-48 | -8.615850e-47 |
| Msa0026910 | Msa0423860 | 0.823673 | 1.220163e-53 | -8.615850e-47 |
| Msa0032470 | Msa0423860 | 0.802704 | 4.943928e-49 | -8.615850e-47 |
| Msa0042550 | Msa0423860 | 0.829079 | 6.292066e-55 | -8.615850e-47 |
| Msa0043980 | Msa0423860 | 0.833216 | 6.056845e-56 | -8.615850e-47 |
| Msa0045790 | Msa0423860 | 0.841391 | 4.889647e-58 | -8.615850e-47 |
| Msa0046160 | Msa0423860 | 0.836093 | 1.145212e-56 | -8.615850e-47 |
| Msa0054480 | Msa0423860 | 0.805493 | 1.300107e-49 | -8.615850e-47 |
| Msa0078640 | Msa0423860 | 0.806588 | 7.647370e-50 | -8.615850e-47 |
| Msa0092410 | Msa0423860 | 0.807611 | 4.645033e-50 | -8.615850e-47 |
| Msa0099620 | Msa0423860 | 0.805413 | 1.351172e-49 | -8.615850e-47 |
| Msa0099650 | Msa0423860 | 0.800981 | 1.116671e-48 | -8.615850e-47 |
| Msa0103250 | Msa0423860 | 0.812742 | 3.638597e-51 | -8.615850e-47 |
| Msa0104230 | Msa0423860 | 0.816777 | 4.641420e-52 | -8.615850e-47 |
| Msa0104240 | Msa0423860 | 0.800010 | 1.761117e-48 | -8.615850e-47 |
| Msa0131770 | Msa0423860 | 0.824624 | 7.296988e-54 | -8.615850e-47 |
| Msa0138020 | Msa0423860 | 0.836311 | 1.008093e-56 | -8.615850e-47 |
| Msa0149300 | Msa0423860 | 0.828803 | 7.335694e-55 | -8.615850e-47 |
| Msa0160960 | Msa0423860 | 0.801875 | 7.323571e-49 | -8.615850e-47 |
| Msa0178510 | Msa0423860 | 0.830848 | 2.330732e-55 | -8.615850e-47 |
| Msa0178570 | Msa0423860 | 0.826864 | 2.147077e-54 | -8.615850e-47 |
| Msa0186950 | Msa0423860 | 0.812325 | 4.487556e-51 | -8.615850e-47 |
| Msa0189040 | Msa0423860 | 0.800329 | 1.516750e-48 | -8.615850e-47 |
| Msa0196840 | Msa0423860 | 0.812148 | 4.905785e-51 | -8.615850e-47 |
| Msa0200850 | Msa0423860 | 0.843630 | 1.245262e-58 | -8.615850e-47 |
| Msa0206010 | Msa0423860 | 0.800079 | 1.705537e-48 | -8.615850e-47 |
| Msa0217700 | Msa0423860 | 0.806231 | 9.096888e-50 | -8.615850e-47 |
| Msa0218370 | Msa0423860 | 0.813560 | 2.406782e-51 | -8.615850e-47 |
| Msa0219590 | Msa0423860 | 0.822280 | 2.577014e-53 | -8.615850e-47 |
| Msa0231060 | Msa0423860 | 0.819220 | 1.302293e-52 | -8.615850e-47 |
| Msa0232020 | Msa0423860 | 0.803291 | 3.739683e-49 | -8.615850e-47 |
| Msa0371950 | Msa0423860 | 0.805501 | 1.294823e-49 | -8.615850e-47 |
| Msa0383800 | Msa0423860 | 0.801702 | 7.949645e-49 | -8.615850e-47 |
| Msa0389910 | Msa0423860 | 0.803161 | 3.978253e-49 | -8.615850e-47 |
| Msa0391400 | Msa0423860 | 0.803020 | 4.254356e-49 | -8.615850e-47 |
| Msa0393620 | Msa0423860 | 0.806472 | 8.089869e-50 | -8.615850e-47 |
| Msa0394470 | Msa0423860 | 0.804119 | 2.517035e-49 | -8.615850e-47 |
| Msa0395750 | Msa0423860 | 0.812799 | 3.534368e-51 | -8.615850e-47 |
| Msa0397270 | Msa0423860 | 0.806471 | 8.096221e-50 | -8.615850e-47 |
| Msa0405130 | Msa0423860 | 0.802415 | 5.671842e-49 | -8.615850e-47 |
| Msa0408300 | Msa0423860 | 0.806549 | 7.792287e-50 | -8.615850e-47 |
| Msa0410580 | Msa0423860 | 0.805817 | 1.111628e-49 | -8.615850e-47 |
| Msa0411390 | Msa0423860 | 0.819122 | 1.370444e-52 | -8.615850e-47 |
| Msa0417330 | Msa0423860 | 0.817803 | 2.728042e-52 | -8.615850e-47 |
| Msa0423860 | Msa0434180 | 0.814151 | 1.782948e-51 | -8.615850e-47 |
| Msa0423860 | Msa0455760 | 0.857384 | 1.692813e-62 | -8.615850e-47 |
| Msa0423860 | Msa0477620 | 0.811055 | 8.475822e-51 | -8.615850e-47 |
| Msa0423860 | Msa0485490 | 0.801400 | 9.166014e-49 | -8.615850e-47 |
| Msa0423860 | Msa0506860 | 0.801546 | 8.557286e-49 | -8.615850e-47 |
| Msa0423860 | Msa0518380 | 0.828653 | 7.978084e-55 | -8.615850e-47 |
| Msa0423860 | Msa0521270 | 0.810261 | 1.258501e-50 | -8.615850e-47 |
| Msa0423860 | Msa0562570 | 0.825309 | 5.028373e-54 | -8.615850e-47 |
| Msa0423860 | Msa0566750 | 0.803708 | 3.064441e-49 | -8.615850e-47 |
| Msa0423860 | Msa0613110 | 0.820324 | 7.285735e-53 | -8.615850e-47 |
| Msa0423860 | Msa0613340 | 0.825446 | 4.667559e-54 | -8.615850e-47 |
| Msa0423860 | Msa0614920 | 0.803795 | 2.939794e-49 | -8.615850e-47 |
| Msa0423860 | Msa0615010 | 0.807402 | 5.143565e-50 | -8.615850e-47 |
| Msa0423860 | Msa0624060 | 0.801117 | 1.047627e-48 | -8.615850e-47 |
| Msa0423860 | Msa0652940 | 0.823307 | 1.486535e-53 | -8.615850e-47 |
| Msa0423860 | Msa0654310 | 0.805865 | 1.085915e-49 | -8.615850e-47 |
| Msa0423860 | Msa0667770 | 0.803989 | 2.679140e-49 | -8.615850e-47 |
| Msa0423860 | Msa0676130 | 0.800195 | 1.615267e-48 | -8.615850e-47 |
| Msa0423860 | Msa0676180 | 0.803910 | 2.781713e-49 | -8.615850e-47 |
| Msa0423860 | Msa0681250 | 0.817019 | 4.095715e-52 | -8.615850e-47 |
| Msa0423860 | Msa0681270 | 0.812905 | 3.350801e-51 | -8.615850e-47 |
| Msa0423860 | Msa0689250 | 0.803954 | 2.724446e-49 | -8.615850e-47 |
| Msa0423860 | Msa0708310 | 0.802003 | 6.892754e-49 | -8.615850e-47 |
| Msa0423860 | Msa0733010 | 0.803550 | 3.305170e-49 | -8.615850e-47 |
| Msa0423860 | Msa0738030 | 0.817250 | 3.634609e-52 | -8.615850e-47 |
| Msa0423860 | Msa0741070 | 0.832914 | 7.202233e-56 | -8.615850e-47 |
| Msa0423860 | Msa0751850 | 0.813065 | 3.090443e-51 | -8.615850e-47 |
| Msa0423860 | Msa0763890 | 0.803154 | 3.990569e-49 | -8.615850e-47 |
| Msa0423860 | Msa0763920 | 0.808480 | 3.033385e-50 | -8.615850e-47 |
| Msa0423860 | Msa0768310 | 0.801134 | 1.039077e-48 | -8.615850e-47 |
| Msa0423860 | Msa0797770 | 0.824996 | 5.962035e-54 | -8.615850e-47 |
| Msa0423860 | Msa0800210 | 0.808110 | 3.637585e-50 | -8.615850e-47 |
| Msa0423860 | Msa0817460 | 0.815107 | 1.094884e-51 | -8.615850e-47 |
| Msa0423860 | Msa0818060 | 0.820985 | 5.136332e-53 | -8.615850e-47 |
| Msa0423860 | Msa0828240 | 0.805794 | 1.123714e-49 | -8.615850e-47 |
| Msa0423860 | Msa0830230 | 0.817242 | 3.649724e-52 | -8.615850e-47 |
| Msa0423860 | Msa0831110 | 0.803750 | 3.003290e-49 | -8.615850e-47 |
| Msa0423860 | Msa0831850 | 0.848148 | 7.369319e-60 | -8.615850e-47 |
| Msa0423860 | Msa0832340 | 0.817314 | 3.517248e-52 | -8.615850e-47 |
| Msa0423860 | Msa0835230 | 0.823599 | 1.270229e-53 | -8.615850e-47 |
| Msa0423860 | Msa0836850 | 0.803826 | 2.896116e-49 | -8.615850e-47 |
| Msa0423860 | Msa0844110 | 0.804130 | 2.503684e-49 | -8.615850e-47 |
| Msa0423860 | Msa0858130 | 0.816853 | 4.464431e-52 | -8.615850e-47 |
| Msa0423860 | Msa0861130 | 0.801090 | 1.060928e-48 | -8.615850e-47 |
| Msa0423860 | Msa0880810 | 0.809118 | 2.216288e-50 | -8.615850e-47 |
| Msa0423860 | Msa0880950 | 0.821806 | 3.320256e-53 | -8.615850e-47 |
| Msa0423860 | Msa0898320 | 0.823176 | 1.594878e-53 | -8.615850e-47 |
| Msa0423860 | Msa0899970 | 0.833230 | 6.008800e-56 | -8.615850e-47 |
| Msa0423860 | Msa0902830 | 0.814622 | 1.403036e-51 | -8.615850e-47 |
| Msa0423860 | Msa0903390 | 0.830038 | 3.677660e-55 | -8.615850e-47 |
| Msa0423860 | Msa0925870 | 0.804547 | 2.050271e-49 | -8.615850e-47 |
| Msa0423860 | Msa0928130 | 0.801424 | 9.065022e-49 | -8.615850e-47 |
| Msa0423860 | Msa0935770 | 0.819460 | 1.148333e-52 | -8.615850e-47 |
| Msa0423860 | Msa0936390 | 0.807741 | 4.359409e-50 | -8.615850e-47 |
| Msa0423860 | Msa0943190 | 0.802468 | 5.530276e-49 | -8.615850e-47 |
| Msa0423860 | Msa0964310 | 0.805477 | 1.309859e-49 | -8.615850e-47 |
| Msa0423860 | Msa0965080 | 0.842490 | 2.504256e-58 | -8.615850e-47 |
| Msa0423860 | Msa0965290 | 0.848148 | 7.372359e-60 | -8.615850e-47 |
| Msa0423860 | Msa0969520 | 0.804198 | 2.423411e-49 | -8.615850e-47 |
| Msa0423860 | Msa0969810 | 0.804315 | 2.291047e-49 | -8.615850e-47 |
| Msa0423860 | Msa0973600 | 0.817129 | 3.869512e-52 | -8.615850e-47 |
| Msa0423860 | Msa0989360 | 0.822187 | 2.708899e-53 | -8.615850e-47 |
| Msa0423860 | Msa0999680 | 0.846433 | 2.178282e-59 | -8.615850e-47 |
| Msa0423860 | Msa1001180 | 0.810742 | 9.910755e-51 | -8.615850e-47 |
| Msa0423860 | Msa1001390 | 0.809159 | 2.171917e-50 | -8.615850e-47 |
| Msa0423860 | Msa1023950 | 0.824826 | 6.539302e-54 | -8.615850e-47 |
| Msa0423860 | Msa1026640 | 0.814673 | 1.366849e-51 | -8.615850e-47 |
| Msa0423860 | Msa1026940 | 0.819183 | 1.327966e-52 | -8.615850e-47 |
| Msa0423860 | Msa1032800 | 0.805108 | 1.565095e-49 | -8.615850e-47 |
| Msa0423860 | Msa1035480 | 0.813487 | 2.496990e-51 | -8.615850e-47 |
| Msa0423860 | Msa1063400 | 0.803073 | 4.148508e-49 | -8.615850e-47 |
| Msa0423860 | Msa1063420 | 0.809977 | 1.448925e-50 | -8.615850e-47 |
| Msa0423860 | Msa1063860 | 0.803287 | 3.746878e-49 | -8.615850e-47 |
| Msa0423860 | Msa1065010 | 0.800362 | 1.493227e-48 | -8.615850e-47 |
| Msa0423860 | Msa1075650 | 0.828919 | 6.879362e-55 | -8.615850e-47 |
| Msa0423860 | Msa1080960 | 0.826906 | 2.097381e-54 | -8.615850e-47 |
| Msa0423860 | Msa1089460 | 0.815988 | 6.971637e-52 | -8.615850e-47 |
| Msa0423860 | Msa1100050 | 0.800103 | 1.685967e-48 | -8.615850e-47 |
| Msa0423860 | Msa1104560 | 0.810148 | 1.331472e-50 | -8.615850e-47 |
| Msa0423860 | Msa1105650 | 0.810255 | 1.262562e-50 | -8.615850e-47 |
| Msa0423860 | Msa1109680 | 0.813925 | 1.999963e-51 | -8.615850e-47 |
| Msa0423860 | Msa1119090 | 0.814323 | 1.633887e-51 | -8.615850e-47 |
| Msa0423860 | Msa1119190 | 0.815987 | 6.973869e-52 | -8.615850e-47 |
| Msa0423860 | Msa1120740 | 0.806550 | 7.788600e-50 | -8.615850e-47 |
| Msa0423860 | Msa1121490 | 0.812756 | 3.611706e-51 | -8.615850e-47 |
| Msa0423860 | Msa1122150 | 0.832034 | 1.189860e-55 | -8.615850e-47 |
| Msa0423860 | Msa1144040 | 0.802241 | 6.159423e-49 | -8.615850e-47 |
| Msa0423860 | Msa1162780 | 0.815658 | 8.259833e-52 | -8.615850e-47 |
| Msa0423860 | Msa1163090 | 0.815006 | 1.152916e-51 | -8.615850e-47 |
| Msa0423860 | Msa1178110 | 0.804896 | 1.733137e-49 | -8.615850e-47 |
| Msa0423860 | Msa1185110 | 0.806990 | 6.288630e-50 | -8.615850e-47 |
| Msa0423860 | Msa1205370 | 0.800220 | 1.596046e-48 | -8.615850e-47 |
| Msa0423860 | Msa1207310 | 0.806301 | 8.791214e-50 | -8.615850e-47 |
| Msa0423860 | Msa1218580 | 0.808418 | 3.127075e-50 | -8.615850e-47 |
| Msa0423860 | Msa1225130 | 0.805203 | 1.494896e-49 | -8.615850e-47 |
| Msa0423860 | Msa1240510 | 0.801123 | 1.044431e-48 | -8.615850e-47 |
| Msa0423860 | Msa1246360 | 0.804385 | 2.216279e-49 | -8.615850e-47 |
| Msa0423860 | Msa1246700 | 0.809096 | 2.240543e-50 | -8.615850e-47 |
| Msa0423860 | Msa1248370 | 0.802072 | 6.672728e-49 | -8.615850e-47 |
| Msa0423860 | Msa1270660 | 0.800328 | 1.517533e-48 | -8.615850e-47 |
| Msa0423860 | Msa1270730 | 0.809746 | 1.625050e-50 | -8.615850e-47 |
| Msa0423860 | Msa1291450 | 0.818504 | 1.893621e-52 | -8.615850e-47 |
| Msa0423860 | Msa1295330 | 0.806377 | 8.473273e-50 | -8.615850e-47 |
| Msa0423860 | Msa1297290 | 0.822916 | 1.833416e-53 | -8.615850e-47 |
| Msa0423860 | Msa1308870 | 0.832534 | 8.950444e-56 | -8.615850e-47 |
| Msa0423860 | Msa1328520 | 0.802425 | 5.644132e-49 | -8.615850e-47 |
| Msa0423860 | Msa1330180 | 0.800294 | 1.541618e-48 | -8.615850e-47 |
| Msa0423860 | Msa1331000 | 0.827604 | 1.427622e-54 | -8.615850e-47 |
| Msa0423860 | Msa1331320 | 0.803803 | 2.927862e-49 | -8.615850e-47 |
| Msa0423860 | Msa1353470 | 0.822515 | 2.273124e-53 | -8.615850e-47 |
| Msa0423860 | Msa1365270 | 0.802543 | 5.337417e-49 | -8.615850e-47 |
| Msa0423860 | Msa1365610 | 0.804773 | 1.838888e-49 | -8.615850e-47 |
| Msa0423860 | Msa1368430 | 0.823690 | 1.209571e-53 | -8.615850e-47 |
| Msa0423860 | Msa1372150 | 0.844294 | 8.264127e-59 | -8.615850e-47 |
| Msa0423860 | Msa1372240 | 0.829482 | 5.022806e-55 | -8.615850e-47 |
| Msa0423860 | Msa1378410 | 0.801041 | 1.085741e-48 | -8.615850e-47 |
| Msa0423860 | Msa1380400 | 0.814183 | 1.754016e-51 | -8.615850e-47 |
| Msa0423860 | Msa1383230 | 0.810132 | 1.342052e-50 | -8.615850e-47 |
| Msa0423860 | Msa1385000 | 0.822568 | 2.209034e-53 | -8.615850e-47 |
| Msa0423860 | Msa1394380 | 0.827091 | 1.894230e-54 | -8.615850e-47 |
| Msa0423860 | Msa1408050 | 0.804121 | 2.515385e-49 | -8.615850e-47 |
| Msa0423860 | Msa1409700 | 0.815269 | 1.007965e-51 | -8.615850e-47 |
| Msa0423860 | Msa1427230 | 0.808493 | 3.015225e-50 | -8.615850e-47 |
| Msa0423860 | Msa1428780 | 0.804962 | 1.679005e-49 | -8.615850e-47 |
| Msa0423860 | Msa1435270 | 0.819029 | 1.438885e-52 | -8.615850e-47 |
| Msa0423860 | Msa1436480 | 0.831461 | 1.647983e-55 | -8.615850e-47 |
| Msa0423860 | Msa1436600 | 0.805019 | 1.633989e-49 | -8.615850e-47 |
| Msa0423860 | Msa1450440 | 0.824230 | 9.032592e-54 | -8.615850e-47 |
| Msa0423860 | Msa1454620 | 0.801134 | 1.039338e-48 | -8.615850e-47 |
| Msa0423860 | Msa1462360 | 0.832633 | 8.457194e-56 | -8.615850e-47 |
| Msa0423860 | Msa1463900 | 0.804975 | 1.668753e-49 | -8.615850e-47 |
| Msa0423860 | Msa1466540 | 0.828751 | 7.552761e-55 | -8.615850e-47 |
| Msa0240270 | Msa0423860 | 0.813689 | 2.254082e-51 | -8.615850e-47 |
| Msa0241140 | Msa0423860 | 0.816962 | 4.218448e-52 | -8.615850e-47 |
| Msa0243480 | Msa0423860 | 0.824279 | 8.795730e-54 | -8.615850e-47 |
| Msa0244190 | Msa0423860 | 0.810458 | 1.141316e-50 | -8.615850e-47 |
| Msa0260780 | Msa0423860 | 0.801756 | 7.747283e-49 | -8.615850e-47 |
| Msa0264830 | Msa0423860 | 0.811130 | 8.166028e-51 | -8.615850e-47 |
| Msa0267370 | Msa0423860 | 0.803651 | 3.149195e-49 | -8.615850e-47 |
| Msa0269560 | Msa0423860 | 0.809688 | 1.672385e-50 | -8.615850e-47 |
| Msa0271550 | Msa0423860 | 0.828165 | 1.045882e-54 | -8.615850e-47 |
| Msa0278580 | Msa0423860 | 0.820894 | 5.389208e-53 | -8.615850e-47 |
| Msa0280090 | Msa0423860 | 0.804084 | 2.559962e-49 | -8.615850e-47 |
| Msa0281930 | Msa0423860 | 0.821955 | 3.065754e-53 | -8.615850e-47 |
| Msa0287410 | Msa0423860 | 0.813154 | 2.954378e-51 | -8.615850e-47 |
| Msa0292930 | Msa0423860 | 0.802009 | 6.873541e-49 | -8.615850e-47 |
| Msa0302870 | Msa0423860 | 0.810750 | 9.869213e-51 | -8.615850e-47 |
| Msa0305190 | Msa0423860 | 0.802088 | 6.621604e-49 | -8.615850e-47 |
| Msa0305410 | Msa0423860 | 0.804459 | 2.138994e-49 | -8.615850e-47 |
| Msa0307310 | Msa0423860 | 0.831596 | 1.526570e-55 | -8.615850e-47 |
| Msa0321080 | Msa0423860 | 0.818041 | 2.411092e-52 | -8.615850e-47 |
| Msa0326110 | Msa0423860 | 0.808533 | 2.956042e-50 | -8.615850e-47 |
| Msa0339620 | Msa0423860 | 0.803646 | 3.156231e-49 | -8.615850e-47 |
| Msa0340340 | Msa0423860 | 0.808251 | 3.395540e-50 | -8.615850e-47 |
| Msa0357790 | Msa0423860 | 0.800947 | 1.134927e-48 | -8.615850e-47 |
| Msa0357830 | Msa0423860 | 0.800094 | 1.693396e-48 | -8.615850e-47 |
| Msa0363790 | Msa0423860 | 0.842699 | 2.204050e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423860 | MtrunA17_Chr3g0125311 | 97.484 | 159 | 4 | 0 | 1 | 159 | 6 | 164 | 1.06e-107 | 304 |
| Msa0423860 | MtrunA17_Chr1g0160151 | 62.420 | 157 | 51 | 4 | 1 | 157 | 15 | 163 | 1.42e-55 | 172 |
| Msa0423860 | MtrunA17_Chr7g0245371 | 34.568 | 162 | 94 | 4 | 4 | 159 | 20 | 175 | 4.89e-22 | 87.0 |
| Msa0423860 | MtrunA17_Chr4g0033601 | 33.758 | 157 | 82 | 3 | 4 | 154 | 1 | 141 | 4.12e-19 | 78.6 |
| Msa0423860 | MtrunA17_Chr8g0351681 | 37.107 | 159 | 80 | 6 | 6 | 156 | 47 | 193 | 3.73e-18 | 77.4 |
| Msa0423860 | MtrunA17_Chr3g0111371 | 32.484 | 157 | 78 | 5 | 4 | 154 | 1 | 135 | 1.07e-17 | 74.7 |
| Msa0423860 | MtrunA17_Chr5g0402331 | 31.818 | 154 | 81 | 5 | 8 | 155 | 48 | 183 | 2.79e-17 | 75.1 |
| Msa0423860 | MtrunA17_Chr1g0161211 | 35.135 | 148 | 84 | 4 | 8 | 155 | 46 | 181 | 1.16e-16 | 73.6 |
| Msa0423860 | MtrunA17_Chr8g0391691 | 34.247 | 146 | 84 | 5 | 6 | 151 | 34 | 167 | 1.34e-16 | 73.2 |
| Msa0423860 | MtrunA17_Chr5g0402361 | 32.099 | 162 | 85 | 6 | 1 | 155 | 212 | 355 | 2.12e-16 | 74.7 |
| Msa0423860 | MtrunA17_Chr5g0402361 | 30.000 | 160 | 90 | 5 | 1 | 155 | 40 | 182 | 1.36e-14 | 69.7 |
| Msa0423860 | MtrunA17_Chr7g0256171 | 33.962 | 159 | 79 | 4 | 4 | 154 | 1 | 141 | 2.43e-16 | 71.6 |
| Msa0423860 | MtrunA17_Chr5g0444171 | 34.459 | 148 | 79 | 4 | 9 | 154 | 398 | 529 | 3.50e-16 | 74.7 |
| Msa0423860 | MtrunA17_Chr1g0169581 | 33.553 | 152 | 79 | 5 | 9 | 154 | 5 | 140 | 4.17e-16 | 70.9 |
| Msa0423860 | MtrunA17_Chr4g0064231 | 34.615 | 156 | 90 | 3 | 8 | 154 | 64 | 216 | 1.10e-15 | 71.2 |
| Msa0423860 | MtrunA17_Chr6g0482731 | 31.973 | 147 | 88 | 3 | 8 | 154 | 26 | 160 | 1.41e-15 | 70.1 |
| Msa0423860 | MtrunA17_Chr4g0057641 | 32.667 | 150 | 88 | 4 | 5 | 154 | 3 | 139 | 2.19e-15 | 68.9 |
| Msa0423860 | MtrunA17_Chr3g0121191 | 30.921 | 152 | 83 | 5 | 7 | 158 | 92 | 221 | 4.15e-15 | 70.1 |
| Msa0423860 | MtrunA17_Chr5g0434951 | 33.987 | 153 | 76 | 6 | 8 | 154 | 4 | 137 | 2.07e-14 | 66.2 |
| Msa0423860 | MtrunA17_Chr4g0057651 | 32.653 | 147 | 86 | 4 | 8 | 154 | 6 | 139 | 2.28e-14 | 66.2 |
| Msa0423860 | MtrunA17_Chr4g0057661 | 32.667 | 150 | 88 | 4 | 5 | 154 | 3 | 139 | 2.38e-14 | 66.2 |
| Msa0423860 | MtrunA17_Chr4g0074811 | 32.432 | 148 | 82 | 4 | 9 | 154 | 397 | 528 | 2.42e-14 | 69.3 |
| Msa0423860 | MtrunA17_Chr7g0245911 | 33.333 | 156 | 87 | 6 | 6 | 154 | 45 | 190 | 2.93e-14 | 67.0 |
| Msa0423860 | MtrunA17_Chr7g0225921 | 32.237 | 152 | 79 | 5 | 10 | 155 | 8 | 141 | 3.11e-14 | 65.9 |
| Msa0423860 | MtrunA17_Chr1g0166281 | 33.099 | 142 | 77 | 5 | 17 | 155 | 21 | 147 | 5.86e-14 | 65.5 |
| Msa0423860 | MtrunA17_Chr3g0098951 | 32.051 | 156 | 79 | 5 | 9 | 154 | 389 | 527 | 1.04e-13 | 67.4 |
| Msa0423860 | MtrunA17_Chr1g0188171 | 30.263 | 152 | 88 | 4 | 7 | 155 | 11 | 147 | 1.06e-13 | 64.7 |
| Msa0423860 | MtrunA17_Chr2g0329371 | 34.395 | 157 | 83 | 3 | 4 | 154 | 60 | 202 | 4.94e-13 | 63.9 |
| Msa0423860 | MtrunA17_Chr8g0392951 | 32.026 | 153 | 79 | 5 | 8 | 154 | 24 | 157 | 5.68e-13 | 63.2 |
| Msa0423860 | MtrunA17_Chr1g0169621 | 31.548 | 168 | 86 | 6 | 9 | 154 | 5 | 165 | 1.33e-12 | 62.0 |
| Msa0423860 | MtrunA17_Chr1g0185001 | 28.571 | 147 | 80 | 4 | 16 | 156 | 20 | 147 | 1.65e-12 | 61.6 |
| Msa0423860 | MtrunA17_Chr8g0387671 | 30.822 | 146 | 87 | 4 | 9 | 154 | 372 | 503 | 1.77e-12 | 63.9 |
| Msa0423860 | MtrunA17_Chr1g0176751 | 30.201 | 149 | 83 | 3 | 9 | 154 | 430 | 560 | 2.70e-12 | 63.5 |
| Msa0423860 | MtrunA17_Chr1g0200601 | 32.895 | 152 | 75 | 5 | 9 | 154 | 336 | 466 | 4.12e-12 | 62.8 |
| Msa0423860 | MtrunA17_Chr5g0440931 | 26.316 | 152 | 94 | 3 | 7 | 155 | 11 | 147 | 7.33e-12 | 59.7 |
| Msa0423860 | MtrunA17_Chr6g0460211 | 26.316 | 152 | 94 | 3 | 7 | 155 | 11 | 147 | 7.41e-12 | 59.7 |
| Msa0423860 | MtrunA17_Chr8g0366401 | 30.065 | 153 | 96 | 4 | 7 | 159 | 16 | 157 | 8.25e-12 | 60.1 |
| Msa0423860 | MtrunA17_Chr7g0254731 | 26.316 | 152 | 94 | 3 | 7 | 155 | 11 | 147 | 1.16e-11 | 59.3 |
| Msa0423860 | MtrunA17_Chr4g0071941 | 44.444 | 72 | 40 | 0 | 83 | 154 | 74 | 145 | 1.18e-11 | 59.3 |
| Msa0423860 | MtrunA17_Chr6g0459231 | 31.613 | 155 | 81 | 5 | 7 | 155 | 7 | 142 | 1.32e-11 | 58.9 |
| Msa0423860 | MtrunA17_Chr5g0397101 | 29.452 | 146 | 89 | 4 | 9 | 154 | 372 | 503 | 1.38e-11 | 61.6 |
| Msa0423860 | MtrunA17_Chr1g0157131 | 29.452 | 146 | 89 | 3 | 9 | 154 | 380 | 511 | 1.47e-11 | 61.2 |
| Msa0423860 | MtrunA17_Chr3g0093271 | 27.397 | 146 | 88 | 4 | 13 | 155 | 68 | 198 | 1.63e-11 | 59.7 |
| Msa0423860 | MtrunA17_Chr4g0044961 | 29.932 | 147 | 89 | 4 | 8 | 154 | 57 | 189 | 1.90e-11 | 59.7 |
| Msa0423860 | MtrunA17_Chr7g0217621 | 43.056 | 72 | 41 | 0 | 83 | 154 | 126 | 197 | 4.34e-11 | 58.5 |
| Msa0423860 | MtrunA17_Chr3g0116151 | 28.947 | 152 | 95 | 4 | 3 | 154 | 1 | 139 | 7.92e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423860 | AT1G21550.1 | 43.226 | 155 | 82 | 3 | 2 | 155 | 4 | 153 | 8.94e-36 | 122 |
| Msa0423860 | AT4G20780.1 | 40.123 | 162 | 83 | 3 | 4 | 154 | 25 | 183 | 2.39e-26 | 99.0 |
| Msa0423860 | AT5G44460.1 | 38.037 | 163 | 87 | 4 | 4 | 159 | 24 | 179 | 2.83e-23 | 90.5 |
| Msa0423860 | AT1G66400.1 | 35.000 | 160 | 82 | 5 | 5 | 158 | 12 | 155 | 5.91e-21 | 84.0 |
| Msa0423860 | AT1G24620.1 | 35.714 | 154 | 81 | 5 | 8 | 158 | 37 | 175 | 1.61e-19 | 80.9 |
| Msa0423860 | AT2G43290.1 | 33.766 | 154 | 91 | 3 | 4 | 154 | 61 | 206 | 1.67e-18 | 79.0 |
| Msa0423860 | AT3G59440.1 | 35.256 | 156 | 78 | 3 | 5 | 154 | 48 | 186 | 2.20e-18 | 78.2 |
| Msa0423860 | AT1G05990.1 | 33.121 | 157 | 84 | 3 | 4 | 154 | 1 | 142 | 1.97e-17 | 74.7 |
| Msa0423860 | AT5G37770.1 | 32.484 | 157 | 84 | 4 | 5 | 154 | 14 | 155 | 2.96e-16 | 72.0 |
| Msa0423860 | AT5G37770.2 | 32.484 | 157 | 84 | 4 | 5 | 154 | 14 | 155 | 2.96e-16 | 72.0 |
| Msa0423860 | AT4G03290.1 | 33.121 | 157 | 86 | 3 | 4 | 154 | 1 | 144 | 1.16e-15 | 70.1 |
| Msa0423860 | AT4G04710.3 | 33.108 | 148 | 81 | 4 | 9 | 154 | 324 | 455 | 4.68e-15 | 71.6 |
| Msa0423860 | AT4G04710.2 | 33.108 | 148 | 81 | 4 | 9 | 154 | 338 | 469 | 5.21e-15 | 71.6 |
| Msa0423860 | AT4G04710.1 | 33.108 | 148 | 81 | 4 | 9 | 154 | 351 | 482 | 5.25e-15 | 71.6 |
| Msa0423860 | AT5G17470.1 | 31.081 | 148 | 88 | 5 | 9 | 154 | 3 | 138 | 5.27e-15 | 68.2 |
| Msa0423860 | AT4G04740.4 | 32.192 | 146 | 85 | 3 | 9 | 154 | 374 | 505 | 6.83e-15 | 71.2 |
| Msa0423860 | AT4G04740.6 | 32.192 | 146 | 85 | 3 | 9 | 154 | 374 | 505 | 6.83e-15 | 71.2 |
| Msa0423860 | AT4G04740.5 | 32.192 | 146 | 85 | 3 | 9 | 154 | 374 | 505 | 6.83e-15 | 71.2 |
| Msa0423860 | AT4G04740.3 | 32.192 | 146 | 85 | 3 | 9 | 154 | 374 | 505 | 6.83e-15 | 71.2 |
| Msa0423860 | AT4G04740.1 | 32.192 | 146 | 85 | 3 | 9 | 154 | 374 | 505 | 6.83e-15 | 71.2 |
| Msa0423860 | AT4G04740.7 | 32.192 | 146 | 85 | 3 | 9 | 154 | 374 | 505 | 6.83e-15 | 71.2 |
| Msa0423860 | AT3G51850.1 | 33.758 | 157 | 71 | 5 | 8 | 154 | 359 | 492 | 6.86e-15 | 71.2 |
| Msa0423860 | AT4G04720.2 | 33.562 | 146 | 83 | 4 | 9 | 154 | 385 | 516 | 9.53e-15 | 70.9 |
| Msa0423860 | AT4G04720.1 | 33.562 | 146 | 83 | 4 | 9 | 154 | 385 | 516 | 9.53e-15 | 70.9 |
| Msa0423860 | AT1G76640.1 | 32.026 | 153 | 82 | 4 | 8 | 154 | 22 | 158 | 1.62e-14 | 67.4 |
| Msa0423860 | AT5G19360.1 | 29.530 | 149 | 85 | 3 | 9 | 154 | 374 | 505 | 2.09e-14 | 70.1 |
| Msa0423860 | AT3G07490.1 | 33.758 | 157 | 82 | 3 | 4 | 154 | 1 | 141 | 2.28e-14 | 66.6 |
| Msa0423860 | AT1G32250.1 | 31.293 | 147 | 95 | 2 | 8 | 154 | 16 | 156 | 8.46e-14 | 65.5 |
| Msa0423860 | AT4G04710.4 | 33.333 | 150 | 80 | 5 | 9 | 154 | 351 | 484 | 9.84e-14 | 68.2 |
| Msa0423860 | AT4G04700.1 | 34.932 | 146 | 81 | 4 | 9 | 154 | 337 | 468 | 1.01e-13 | 68.2 |
| Msa0423860 | AT4G21940.2 | 32.877 | 146 | 84 | 4 | 9 | 154 | 407 | 538 | 1.02e-13 | 68.2 |
| Msa0423860 | AT4G21940.1 | 32.877 | 146 | 84 | 4 | 9 | 154 | 407 | 538 | 1.21e-13 | 67.8 |
| Msa0423860 | AT2G36180.1 | 30.323 | 155 | 81 | 5 | 9 | 154 | 1 | 137 | 1.33e-13 | 64.7 |
| Msa0423860 | AT1G73630.1 | 29.936 | 157 | 88 | 5 | 2 | 154 | 12 | 150 | 1.87e-13 | 64.7 |
| Msa0423860 | AT3G51920.1 | 29.452 | 146 | 85 | 4 | 16 | 158 | 20 | 150 | 1.88e-13 | 64.3 |
| Msa0423860 | AT4G04695.1 | 33.784 | 148 | 80 | 4 | 9 | 154 | 337 | 468 | 1.89e-13 | 67.0 |
| Msa0423860 | AT4G12860.1 | 29.870 | 154 | 92 | 2 | 4 | 154 | 1 | 141 | 2.32e-13 | 64.3 |
| Msa0423860 | AT5G42380.1 | 33.553 | 152 | 88 | 5 | 4 | 154 | 45 | 184 | 8.74e-13 | 63.2 |
| Msa0423860 | AT1G35670.1 | 30.921 | 152 | 78 | 4 | 9 | 154 | 332 | 462 | 1.08e-12 | 65.1 |
| Msa0423860 | AT4G09570.1 | 31.579 | 152 | 77 | 4 | 9 | 154 | 331 | 461 | 1.27e-12 | 64.7 |
| Msa0423860 | AT1G18530.1 | 29.139 | 151 | 97 | 2 | 9 | 159 | 8 | 148 | 2.14e-12 | 61.6 |
| Msa0423860 | AT1G66410.1 | 26.974 | 152 | 93 | 4 | 7 | 155 | 11 | 147 | 2.51e-12 | 61.2 |
| Msa0423860 | AT5G37780.1 | 26.974 | 152 | 93 | 4 | 7 | 155 | 11 | 147 | 2.51e-12 | 61.2 |
| Msa0423860 | AT4G14640.1 | 28.188 | 149 | 95 | 2 | 7 | 155 | 12 | 148 | 2.69e-12 | 61.2 |
| Msa0423860 | AT2G15680.1 | 30.000 | 150 | 91 | 4 | 5 | 154 | 47 | 182 | 4.23e-12 | 61.6 |
| Msa0423860 | AT4G23650.1 | 31.507 | 146 | 86 | 4 | 9 | 154 | 384 | 515 | 4.24e-12 | 63.2 |
| Msa0423860 | AT5G21274.1 | 26.974 | 152 | 93 | 3 | 7 | 155 | 11 | 147 | 4.47e-12 | 60.8 |
| Msa0423860 | AT3G47480.1 | 41.096 | 73 | 41 | 2 | 83 | 154 | 107 | 178 | 6.27e-12 | 60.8 |
| Msa0423860 | AT1G50700.1 | 28.767 | 146 | 90 | 3 | 9 | 154 | 379 | 510 | 7.45e-12 | 62.8 |
| Msa0423860 | AT3G43810.1 | 26.316 | 152 | 94 | 3 | 7 | 155 | 11 | 147 | 1.02e-11 | 59.7 |
| Msa0423860 | AT3G43810.2 | 27.333 | 150 | 91 | 3 | 13 | 159 | 17 | 151 | 1.17e-11 | 60.8 |
| Msa0423860 | AT1G18210.2 | 26.846 | 149 | 89 | 4 | 8 | 154 | 23 | 153 | 1.40e-11 | 59.7 |
| Msa0423860 | AT1G18210.1 | 26.846 | 149 | 89 | 4 | 8 | 154 | 23 | 153 | 1.40e-11 | 59.7 |
| Msa0423860 | AT3G20410.2 | 28.767 | 146 | 90 | 3 | 9 | 154 | 397 | 528 | 2.33e-11 | 61.2 |
| Msa0423860 | AT3G20410.1 | 28.767 | 146 | 90 | 3 | 9 | 154 | 397 | 528 | 2.33e-11 | 61.2 |
| Msa0423860 | AT4G14640.2 | 28.358 | 134 | 84 | 2 | 22 | 155 | 9 | 130 | 3.07e-11 | 58.2 |
| Msa0423860 | AT3G56800.1 | 25.658 | 152 | 95 | 3 | 7 | 155 | 11 | 147 | 3.30e-11 | 58.5 |
| Msa0423860 | AT2G41110.1 | 25.658 | 152 | 95 | 3 | 7 | 155 | 11 | 147 | 3.30e-11 | 58.5 |
| Msa0423860 | AT2G27030.1 | 25.658 | 152 | 95 | 3 | 7 | 155 | 11 | 147 | 3.30e-11 | 58.5 |
| Msa0423860 | AT5G23580.1 | 29.530 | 149 | 84 | 3 | 9 | 154 | 328 | 458 | 5.96e-11 | 60.1 |
| Msa0423860 | AT3G50770.1 | 29.299 | 157 | 94 | 6 | 5 | 156 | 61 | 205 | 8.99e-11 | 58.2 |
| Msa0423860 | AT5G37780.4 | 29.197 | 137 | 79 | 5 | 22 | 155 | 13 | 134 | 9.02e-11 | 57.0 |
Find 23 sgRNAs with CRISPR-Local
Find 28 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTATTATTGCATATTCTT+TGG | 0.216223 | 3_2:-73908804 | None:intergenic |
| TAGAGATTCAAGTTCTTCTA+AGG | 0.309731 | 3_2:-73908836 | None:intergenic |
| GTTGAAGAGACTTGGATTCT+TGG | 0.328203 | 3_2:+73909050 | Msa0423860:CDS |
| GACTTTCAAAGTGTTTGATT+TGG | 0.354266 | 3_2:+73908987 | Msa0423860:CDS |
| ATCAAGCCTACCATCCGAAT+TGG | 0.406165 | 3_2:-73909121 | None:intergenic |
| TTCAAAGTGTTTGATTTGGA+TGG | 0.441224 | 3_2:+73908991 | Msa0423860:CDS |
| GGGATTGTAGAAGTATGATT+CGG | 0.454094 | 3_2:+73909088 | Msa0423860:CDS |
| ATGATACCAATTCGGATGGT+AGG | 0.471644 | 3_2:+73909115 | Msa0423860:CDS |
| TCAACACACACTCAAGCTCT+TGG | 0.480809 | 3_2:-73909032 | None:intergenic |
| TGAGAATGATGAGTTGGAGA+GGG | 0.503791 | 3_2:+73908954 | Msa0423860:CDS |
| GTGTTTGATTTGGATGGAGA+TGG | 0.509027 | 3_2:+73908997 | Msa0423860:CDS |
| GAGAAGAATGAAGAGAATAG+AGG | 0.509945 | 3_2:+73908919 | Msa0423860:CDS |
| CTTGGATGAAAGTAGTGGGA+GGG | 0.521104 | 3_2:+73909068 | Msa0423860:CDS |
| ATGAGAATGATGAGTTGGAG+AGG | 0.535268 | 3_2:+73908953 | Msa0423860:CDS |
| TGAAGATGAGAATGATGAGT+TGG | 0.536288 | 3_2:+73908948 | Msa0423860:CDS |
| GAGTGTGTGTTGAAGAGACT+TGG | 0.561588 | 3_2:+73909042 | Msa0423860:CDS |
| GGATTCTTGGATGAAAGTAG+TGG | 0.564575 | 3_2:+73909063 | Msa0423860:CDS |
| AGAAGAACTTGAATCTCTAG+TGG | 0.579031 | 3_2:+73908840 | Msa0423860:CDS |
| AAGAATGAAGAGAATAGAGG+AGG | 0.602155 | 3_2:+73908922 | Msa0423860:CDS |
| GATTCTTGGATGAAAGTAGT+GGG | 0.605078 | 3_2:+73909064 | Msa0423860:CDS |
| GCACAGAGTTTAGCTCCTCA+AGG | 0.608778 | 3_2:-73908780 | None:intergenic |
| AAGCTAGATACAAATTGTGA+CGG | 0.623579 | 3_2:+73908748 | Msa0423860:CDS |
| TCTTGGATGAAAGTAGTGGG+AGG | 0.636199 | 3_2:+73909067 | Msa0423860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTATTATTGCATATTCTT+TGG | - | chr3_2:73908807-73908826 | None:intergenic | 20.0% |
| !! | CTTTTACAACTCTATATCAA+AGG | + | chr3_2:73908897-73908916 | Msa0423860:CDS | 25.0% |
| AAGCTAGATACAAATTGTGA+CGG | + | chr3_2:73908748-73908767 | Msa0423860:CDS | 30.0% | |
| ! | TAGAGATTCAAGTTCTTCTA+AGG | - | chr3_2:73908839-73908858 | None:intergenic | 30.0% |
| ! | GACTTTCAAAGTGTTTGATT+TGG | + | chr3_2:73908987-73909006 | Msa0423860:CDS | 30.0% |
| !! | TTCAAAGTGTTTGATTTGGA+TGG | + | chr3_2:73908991-73909010 | Msa0423860:CDS | 30.0% |
| !! | TCGGTTTTATGATACCAATT+CGG | + | chr3_2:73909107-73909126 | Msa0423860:CDS | 30.0% |
| ! | TTTTATGATACCAATTCGGA+TGG | + | chr3_2:73909111-73909130 | Msa0423860:CDS | 30.0% |
| AGAAGAACTTGAATCTCTAG+TGG | + | chr3_2:73908840-73908859 | Msa0423860:CDS | 35.0% | |
| GAGAAGAATGAAGAGAATAG+AGG | + | chr3_2:73908919-73908938 | Msa0423860:CDS | 35.0% | |
| AAGAATGAAGAGAATAGAGG+AGG | + | chr3_2:73908922-73908941 | Msa0423860:CDS | 35.0% | |
| TGAAGATGAGAATGATGAGT+TGG | + | chr3_2:73908948-73908967 | Msa0423860:CDS | 35.0% | |
| GATTCTTGGATGAAAGTAGT+GGG | + | chr3_2:73909064-73909083 | Msa0423860:CDS | 35.0% | |
| ! | GGGATTGTAGAAGTATGATT+CGG | + | chr3_2:73909088-73909107 | Msa0423860:CDS | 35.0% |
| ! | ATGAGAATGATGAGTTGGAG+AGG | + | chr3_2:73908953-73908972 | Msa0423860:CDS | 40.0% |
| ! | TGAGAATGATGAGTTGGAGA+GGG | + | chr3_2:73908954-73908973 | Msa0423860:CDS | 40.0% |
| !! | GTGTTTGATTTGGATGGAGA+TGG | + | chr3_2:73908997-73909016 | Msa0423860:CDS | 40.0% |
| GTTGAAGAGACTTGGATTCT+TGG | + | chr3_2:73909050-73909069 | Msa0423860:CDS | 40.0% | |
| GGATTCTTGGATGAAAGTAG+TGG | + | chr3_2:73909063-73909082 | Msa0423860:CDS | 40.0% | |
| ATGATACCAATTCGGATGGT+AGG | + | chr3_2:73909115-73909134 | Msa0423860:CDS | 40.0% | |
| TCAACACACACTCAAGCTCT+TGG | - | chr3_2:73909035-73909054 | None:intergenic | 45.0% | |
| GAGTGTGTGTTGAAGAGACT+TGG | + | chr3_2:73909042-73909061 | Msa0423860:CDS | 45.0% | |
| ! | TCTTGGATGAAAGTAGTGGG+AGG | + | chr3_2:73909067-73909086 | Msa0423860:CDS | 45.0% |
| ! | CTTGGATGAAAGTAGTGGGA+GGG | + | chr3_2:73909068-73909087 | Msa0423860:CDS | 45.0% |
| ATCAAGCCTACCATCCGAAT+TGG | - | chr3_2:73909124-73909143 | None:intergenic | 45.0% | |
| ! | GGATGGTAGGCTTGATTTTC+AGG | + | chr3_2:73909128-73909147 | Msa0423860:CDS | 45.0% |
| !! | TGACGGTTTTGTGAGCCTTG+AGG | + | chr3_2:73908765-73908784 | Msa0423860:CDS | 50.0% |
| ! | GCACAGAGTTTAGCTCCTCA+AGG | - | chr3_2:73908783-73908802 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 73908706 | 73909185 | 73908706 | ID=Msa0423860;Name=Msa0423860 |
| chr3_2 | mRNA | 73908706 | 73909185 | 73908706 | ID=Msa0423860-mRNA-1;Parent=Msa0423860;Name=Msa0423860-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|-1|0|1|-1|1|1|0|159 |
| chr3_2 | exon | 73908706 | 73909185 | 73908706 | ID=Msa0423860-mRNA-1:exon:18599;Parent=Msa0423860-mRNA-1 |
| chr3_2 | CDS | 73908706 | 73909185 | 73908706 | ID=Msa0423860-mRNA-1:cds;Parent=Msa0423860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
