AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1458770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1458770 MtrunA17_Chr2g0287061 97.766 761 14 1 1 758 1 761 0.0 1553
Msa1458770 MtrunA17_Chr5g0448761 37.043 629 342 13 178 754 58 684 2.50e-131 408
Msa1458770 MtrunA17_Chr5g0448511 43.213 442 240 6 323 754 16 456 6.97e-123 379
Msa1458770 MtrunA17_Chr1g0202341 35.191 628 349 13 178 754 49 669 1.96e-122 382
Msa1458770 MtrunA17_Chr5g0440451 36.597 623 345 11 179 754 42 661 3.58e-121 386
Msa1458770 MtrunA17_Chr5g0440451 37.778 90 56 0 28 117 42 131 3.84e-12 70.1
Msa1458770 MtrunA17_Chr6g0458391 31.436 738 421 17 5 697 67 764 3.51e-109 350
Msa1458770 MtrunA17_Chr6g0458391 29.480 173 96 4 119 268 22 191 1.23e-15 81.3
Msa1458770 MtrunA17_Chr3g0118611 40.899 445 253 7 318 755 118 559 5.17e-102 331
Msa1458770 MtrunA17_Chr1g0207551 34.392 567 329 8 172 698 26 589 2.23e-100 328
Msa1458770 MtrunA17_Chr2g0329031 33.608 607 366 11 179 753 13 614 3.50e-97 317
Msa1458770 MtrunA17_Chr2g0291581 32.125 607 374 12 180 750 71 675 5.32e-97 315
Msa1458770 MtrunA17_Chr2g0291581 32.759 116 68 2 11 117 54 168 4.51e-11 66.2
Msa1458770 MtrunA17_Chr3g0080351 30.556 612 378 14 178 752 74 675 3.69e-89 298
Msa1458770 MtrunA17_Chr5g0441581 31.598 557 344 10 175 696 27 581 1.65e-88 293
Msa1458770 MtrunA17_Chr8g0363841 31.690 568 338 13 181 702 18 581 8.02e-84 280
Msa1458770 MtrunA17_Chr1g0203721 29.660 617 381 11 182 749 65 677 5.17e-82 280
Msa1458770 MtrunA17_Chr1g0203721 38.776 98 47 1 31 115 65 162 1.29e-11 68.6
Msa1458770 MtrunA17_Chr2g0324011 29.597 571 352 14 179 704 9 574 1.29e-79 266
Msa1458770 MtrunA17_Chr2g0324011 36.036 111 53 4 24 119 5 112 8.09e-11 65.5
Msa1458770 MtrunA17_Chr2g0296781 31.504 565 320 15 186 696 3 554 1.01e-77 265
Msa1458770 MtrunA17_Chr2g0291591 30.970 536 316 11 123 616 16 539 1.73e-76 257
Msa1458770 MtrunA17_Chr1g0203051 28.870 575 351 15 154 685 62 621 2.49e-75 256
Msa1458770 MtrunA17_Chr6g0477261 36.387 393 223 8 323 696 59 443 1.25e-74 255
Msa1458770 MtrunA17_Chr1g0196541 29.550 555 342 14 186 695 3 553 1.84e-71 248
Msa1458770 MtrunA17_Chr3g0082121 28.896 616 384 18 180 752 43 647 1.41e-70 244
Msa1458770 MtrunA17_Chr2g0287651 28.325 579 324 14 185 698 80 632 3.78e-68 241
Msa1458770 MtrunA17_Chr2g0276841 26.270 571 352 13 180 695 70 626 7.72e-58 209
Msa1458770 MtrunA17_Chr1g0198761 28.697 568 342 15 181 693 48 607 1.34e-57 209
Msa1458770 MtrunA17_Chr2g0294841 26.003 573 365 13 173 693 38 603 3.13e-51 191
Msa1458770 MtrunA17_Chr2g0290391 26.943 579 345 16 178 695 49 610 8.20e-50 186
Msa1458770 MtrunA17_Chr5g0431001 27.314 443 248 13 162 541 40 471 8.83e-40 154
Msa1458770 MtrunA17_Chr1g0164591 32.231 242 155 5 301 536 72 310 1.58e-39 149
Msa1458770 MtrunA17_Chr7g0258861 31.058 293 162 8 179 432 9 300 7.21e-31 123
Msa1458770 MtrunA17_Chr7g0258861 34.286 105 54 2 29 119 10 113 3.26e-11 65.1
Msa1458770 MtrunA17_Chr2g0308841 27.232 224 156 4 479 697 5 226 2.83e-23 100
Msa1458770 MtrunA17_Chr4g0033611 43.119 109 50 1 179 275 75 183 5.68e-23 99.0
Msa1458770 MtrunA17_Chr4g0033611 33.333 150 70 3 28 150 75 221 2.66e-16 79.7
Msa1458770 MtrunA17_Chr2g0329421 41.284 109 52 1 179 275 26 134 2.75e-22 95.9
Msa1458770 MtrunA17_Chr2g0329421 41.176 102 48 1 28 117 26 127 4.21e-18 83.6
Msa1458770 MtrunA17_Chr2g0329361 36.735 147 67 3 26 152 58 198 3.43e-19 87.8
Msa1458770 MtrunA17_Chr2g0329361 33.019 106 56 1 178 268 59 164 1.94e-13 70.9
Msa1458770 MtrunA17_Chr7g0233911 40.541 111 52 1 28 124 33 143 6.13e-19 86.3
Msa1458770 MtrunA17_Chr7g0233911 44.231 104 44 2 179 268 33 136 7.54e-18 83.2
Msa1458770 MtrunA17_Chr3g0078041 35.659 129 69 1 179 293 49 177 4.12e-18 84.3
Msa1458770 MtrunA17_Chr3g0078041 39.423 104 49 1 28 117 49 152 4.36e-18 84.3
Msa1458770 MtrunA17_Chr1g0149131 26.957 115 81 1 423 534 1 115 2.11e-13 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1458770 AT3G06250.2 59.792 771 290 9 1 758 1 764 0.0 929
Msa1458770 AT3G06250.1 59.792 771 290 9 1 758 1 764 0.0 929
Msa1458770 AT3G06250.3 59.792 771 290 9 1 758 1 764 0.0 929
Msa1458770 AT5G18960.2 56.978 781 307 10 1 758 14 788 0.0 888
Msa1458770 AT5G18960.1 56.978 781 307 10 1 758 14 788 0.0 888
Msa1458770 AT4G38180.1 36.320 625 348 11 178 754 71 693 1.72e-129 404
Msa1458770 AT4G38180.1 33.974 156 78 4 20 158 63 210 3.02e-14 77.4
Msa1458770 AT2G27110.2 37.420 628 363 12 149 754 16 635 4.03e-122 387
Msa1458770 AT2G27110.1 37.420 628 363 12 149 754 16 635 4.03e-122 387
Msa1458770 AT2G27110.3 40.870 460 257 6 308 754 33 490 3.79e-108 346
Msa1458770 AT4G15090.1 32.899 614 366 10 178 749 49 658 2.76e-106 344
Msa1458770 AT4G15090.5 32.899 614 366 10 178 749 49 658 2.76e-106 344
Msa1458770 AT4G15090.3 32.899 614 366 10 178 749 49 658 2.76e-106 344
Msa1458770 AT4G15090.2 32.899 614 366 10 178 749 49 658 2.76e-106 344
Msa1458770 AT4G15090.4 32.899 614 366 10 178 749 49 658 2.76e-106 344
Msa1458770 AT4G38170.1 40.136 441 252 7 323 755 21 457 2.61e-104 331
Msa1458770 AT1G52520.1 32.846 615 369 14 180 754 85 695 2.15e-100 325
Msa1458770 AT1G52520.1 29.530 149 90 3 29 165 85 230 8.45e-11 65.9
Msa1458770 AT3G22170.2 31.240 605 367 10 178 744 68 661 6.49e-100 327
Msa1458770 AT3G22170.1 31.240 605 367 10 178 744 68 661 6.49e-100 327
Msa1458770 AT1G76320.3 33.759 548 326 10 185 699 2 545 9.34e-90 296
Msa1458770 AT1G76320.2 33.759 548 326 10 185 699 2 545 3.38e-89 296
Msa1458770 AT1G76320.1 33.759 548 326 10 185 699 2 545 3.64e-89 296
Msa1458770 AT1G76320.4 33.759 548 326 10 185 699 2 545 3.64e-89 296
Msa1458770 AT2G32250.5 31.852 540 322 8 183 699 41 557 4.28e-86 288
Msa1458770 AT2G32250.6 31.852 540 322 8 183 699 41 557 1.13e-85 288
Msa1458770 AT2G32250.1 31.852 540 322 8 183 699 41 557 1.13e-85 288
Msa1458770 AT2G32250.3 31.852 540 322 8 183 699 41 557 1.13e-85 288
Msa1458770 AT2G32250.2 31.852 540 322 8 183 699 41 557 1.50e-85 288
Msa1458770 AT2G32250.4 31.852 540 322 8 183 699 41 557 1.50e-85 288
Msa1458770 AT2G32250.8 31.784 538 321 8 185 699 2 516 3.38e-85 286
Msa1458770 AT2G32250.7 31.784 538 321 8 185 699 2 516 4.50e-85 286
Msa1458770 AT1G80010.1 28.708 627 391 12 180 754 95 717 1.30e-84 284
Msa1458770 AT1G80010.1 31.579 114 69 1 16 120 82 195 2.12e-11 68.2
Msa1458770 AT4G19990.3 29.244 595 361 11 168 723 15 588 3.68e-76 261
Msa1458770 AT4G19990.4 29.244 595 361 11 168 723 15 588 3.68e-76 261
Msa1458770 AT4G19990.5 29.244 595 361 11 168 723 15 588 5.37e-76 261
Msa1458770 AT4G19990.6 29.244 595 361 11 168 723 15 588 7.33e-76 261
Msa1458770 AT4G19990.2 29.244 595 361 11 168 723 15 588 7.33e-76 261
Msa1458770 AT4G19990.7 29.244 595 361 11 168 723 29 602 7.49e-76 261
Msa1458770 AT4G19990.1 30.200 500 321 8 237 723 47 531 3.33e-68 238
Msa1458770 AT5G28530.1 28.970 573 337 14 180 693 55 616 2.83e-59 213
Msa1458770 AT5G28530.3 28.621 573 335 14 180 693 55 612 5.25e-59 213
Msa1458770 AT5G28530.2 28.621 573 335 14 180 693 55 612 5.25e-59 213
Msa1458770 AT1G10240.2 27.634 579 350 15 172 695 40 604 4.34e-58 210
Msa1458770 AT1G10240.1 27.634 579 350 15 172 695 40 604 4.34e-58 210
Msa1458770 AT5G28530.4 25.741 540 334 13 180 693 55 553 1.39e-45 173
Msa1458770 AT5G28530.5 25.370 540 332 13 180 693 55 549 2.07e-45 172
Msa1458770 AT3G59470.3 46.789 109 46 1 179 275 69 177 5.86e-24 102
Msa1458770 AT3G59470.3 34.161 161 73 3 14 148 62 215 4.64e-19 87.8
Msa1458770 AT3G59470.1 46.789 109 46 1 179 275 69 177 5.86e-24 102
Msa1458770 AT3G59470.1 34.161 161 73 3 14 148 62 215 4.64e-19 87.8
Msa1458770 AT3G59470.2 46.789 109 46 1 179 275 81 189 7.03e-24 102
Msa1458770 AT3G59470.2 34.161 161 73 3 14 148 74 227 5.30e-19 88.2
Msa1458770 AT3G07500.1 38.532 109 54 1 173 268 26 134 3.67e-19 87.4
Msa1458770 AT3G07500.1 39.806 103 49 1 28 117 32 134 3.55e-16 78.6
Msa1458770 AT4G12850.4 42.574 101 48 1 28 118 10 110 1.93e-18 82.8
Msa1458770 AT4G12850.4 42.982 114 52 2 179 279 10 123 5.45e-18 81.6
Msa1458770 AT4G12850.1 42.574 101 48 1 28 118 10 110 2.55e-18 84.0
Msa1458770 AT4G12850.1 38.732 142 61 4 179 300 10 145 5.09e-18 83.2
Msa1458770 AT4G12850.2 40.909 110 52 2 19 118 4 110 3.01e-18 82.4
Msa1458770 AT4G12850.2 44.000 100 46 1 179 268 10 109 1.53e-17 80.5
Msa1458770 AT2G43280.1 39.815 108 51 1 24 117 17 124 5.07e-18 84.0
Msa1458770 AT2G43280.1 36.364 132 70 2 178 295 20 151 3.45e-16 78.6
Msa1458770 AT2G43280.2 33.835 133 74 1 44 162 2 134 2.38e-14 72.0
Msa1458770 AT2G43280.2 36.522 115 59 2 195 295 2 116 1.91e-13 69.7

Find 152 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAATTGCATGAGCATATTT+TGG 0.147366 tig0039767:+10365 Msa1458770:CDS
CTGGGTTCCGTTCTATTTAA+AGG 0.153193 tig0039767:+10885 Msa1458770:CDS
TTCTTTGGTGGAAGTTTAAA+TGG 0.183946 tig0039767:+10952 Msa1458770:CDS
TGGTGAATGGCGACATATTT+AGG 0.203007 tig0039767:+10206 Msa1458770:CDS
AGGGTTCAGTTAAATGATTC+TGG 0.241282 tig0039767:+9611 Msa1458770:CDS
CATGCAGCATACTTGGGTTT+TGG 0.249061 tig0039767:+9923 Msa1458770:CDS
CACAAGCAACCTGTGCTTCT+TGG 0.254421 tig0039767:+10505 Msa1458770:CDS
GGCAATAGCAAAAGTCTTTC+CGG 0.278519 tig0039767:+10651 Msa1458770:CDS
TTGCAGTGCTTTAGTTATCT+TGG 0.278930 tig0039767:+11162 Msa1458770:CDS
CCATGCTCATGCAGCATACT+TGG 0.293439 tig0039767:+9916 Msa1458770:CDS
CTTTATCGATCGAGAACTAA+TGG 0.295969 tig0039767:+9509 Msa1458770:CDS
GATTCCATGCTTTCTTTCAT+AGG 0.296754 tig0039767:-10928 None:intergenic
GTAGAAGACTCGATAGCTTT+TGG 0.308596 tig0039767:-9716 None:intergenic
ATAACACCAAAGGGAGAAAT+AGG 0.311248 tig0039767:-9791 None:intergenic
GAAAGCATGGAATCATTCTT+TGG 0.319532 tig0039767:+10937 Msa1458770:CDS
GGTGAACCTATTTCTCCCTT+TGG 0.320761 tig0039767:+9785 Msa1458770:CDS
TATGCCATGGAAGTTGATAA+TGG 0.354230 tig0039767:+10343 Msa1458770:CDS
TGGGTTCCGTTCTATTTAAA+GGG 0.358637 tig0039767:+10886 Msa1458770:CDS
CTGCATGAGCATGGTAAAAT+TGG 0.364754 tig0039767:-9907 None:intergenic
TAAAATTGGTAGGCTTCATT+AGG 0.371960 tig0039767:-9893 None:intergenic
ATCGAATGGGATTTAAAGTT+CGG 0.379216 tig0039767:+9477 Msa1458770:CDS
AAAAGATCATAATCATGATC+TGG 0.383971 tig0039767:+10111 Msa1458770:CDS
ATATAGAAAGAGTGTTTATA+TGG 0.389131 tig0039767:+10450 Msa1458770:CDS
CTGGTTGTCCAGCATTCATA+AGG 0.391197 tig0039767:+9591 Msa1458770:CDS
AGTGCTGTACTCGTCAAATA+TGG 0.393973 tig0039767:+10814 Msa1458770:CDS
CGCTTTGTGTGCTCAAAAGA+AGG 0.394545 tig0039767:+10001 Msa1458770:CDS
AGGGTCCCTCAGCAGATATT+TGG 0.395130 tig0039767:+11203 Msa1458770:CDS
CATAATCATGATCTGGGCCT+TGG 0.409497 tig0039767:+10118 Msa1458770:CDS
CCACAACGAAAAGCGATGAT+TGG 0.412913 tig0039767:-10677 None:intergenic
TCGCCGGTCTGATGGGTAAT+GGG 0.413317 tig0039767:+10725 Msa1458770:CDS
GCCTTACAGCCAACTCTTGA+AGG 0.417533 tig0039767:-10034 None:intergenic
CGTCAAATTCATCGACTGTC+TGG 0.424860 tig0039767:-10783 None:intergenic
CTTCTGCACTGTTCTTCTAC+TGG 0.426641 tig0039767:-11096 None:intergenic
CGAGGAGGTAAACACTGAAT+TGG 0.426954 tig0039767:+10186 Msa1458770:CDS
TGGTAATGAGTAATGCAATT+GGG 0.428684 tig0039767:+9363 Msa1458770:CDS
CCCTTCAAGAGTTGGCTGTA+AGG 0.428884 tig0039767:+10033 Msa1458770:CDS
AGATACTCATGTAGTCAGTT+TGG 0.430685 tig0039767:+10403 Msa1458770:CDS
CTCGCCGGTCTGATGGGTAA+TGG 0.438659 tig0039767:+10724 Msa1458770:CDS
AACTGAACCCTTATGAATGC+TGG 0.443026 tig0039767:-9599 None:intergenic
TTCATTCCGCGTTATGAAAG+AGG 0.443774 tig0039767:+10994 Msa1458770:CDS
TGTCTAGCTCCTCTTAGGAC+AGG 0.444148 tig0039767:-10241 None:intergenic
GCTACAACTAATGTCAAGAT+TGG 0.453950 tig0039767:-11280 None:intergenic
TTGTCTTACGTTCCGTTCCA+AGG 0.458529 tig0039767:-10135 None:intergenic
CTGGTAATGAGTAATGCAAT+TGG 0.460733 tig0039767:+9362 Msa1458770:CDS
ATATCTTATGGTAATCGAAT+GGG 0.462953 tig0039767:+9464 Msa1458770:CDS
GAAAAGCGATGATTGGTTAC+CGG 0.465829 tig0039767:-10670 None:intergenic
TTCTTTGTAGACACGTGTTG+AGG 0.466046 tig0039767:+11328 Msa1458770:CDS
TAAGTGTGGAAATGATGATA+TGG 0.473912 tig0039767:+11230 Msa1458770:CDS
AAAAGAAGAACTTGAAGTAC+AGG 0.474189 tig0039767:+9832 Msa1458770:CDS
AGGATCATGGAGTAGCTCTC+AGG 0.475535 tig0039767:+11443 Msa1458770:CDS
TCAAGGCAAGCAGAAGATAC+AGG 0.476103 tig0039767:+10313 Msa1458770:CDS
GGATTTAAAATCTATGAAGA+AGG 0.480432 tig0039767:+11183 Msa1458770:CDS
GAGTAATGCAATTGGGGAGG+AGG 0.480640 tig0039767:+9370 Msa1458770:CDS
GCATCCTGTTGGTACTGAAC+TGG 0.481228 tig0039767:+9343 Msa1458770:CDS
TTTATCGATCGAGAACTAAT+GGG 0.481588 tig0039767:+9510 Msa1458770:CDS
AAAATCACATTAGAAGTGAT+TGG 0.484311 tig0039767:+10263 Msa1458770:CDS
AGCCAACTCTTGAAGGGTGC+TGG 0.486059 tig0039767:-10027 None:intergenic
AGGATTAAGAATCAACCATC+AGG 0.487093 tig0039767:+10064 Msa1458770:CDS
TCACTTGGTTGTTTCAGACA+TGG 0.489216 tig0039767:+10563 Msa1458770:CDS
ACCCTCTCGCAAAATCTCAT+AGG 0.490493 tig0039767:-11556 None:intergenic
ACCAACATATGGTTCGATCC+TGG 0.490539 tig0039767:-9855 None:intergenic
CTGAACTCTTGACCAACATA+TGG 0.491150 tig0039767:-9866 None:intergenic
GTTAAATGATTCTGGAAAGT+GGG 0.491161 tig0039767:+9619 Msa1458770:CDS
ATTCATCGACTGTCTGGCTC+TGG 0.491387 tig0039767:-10777 None:intergenic
CATCAGCTCAGTTCAAGAAC+TGG 0.495226 tig0039767:+9572 Msa1458770:CDS
AGGAAGAAAATGCTTGAAGT+AGG 0.495697 tig0039767:+9758 Msa1458770:CDS
CAAGAGCTCGCCGGTCTGAT+GGG 0.495940 tig0039767:+10718 Msa1458770:CDS
TGAACTCTGTGAGAGGTGTT+TGG 0.496070 tig0039767:-10975 None:intergenic
AGAATCAACCATCAGGAAAG+TGG 0.496214 tig0039767:+10071 Msa1458770:CDS
CAATTCAGTGTTTACCTCCT+CGG 0.500177 tig0039767:-10185 None:intergenic
ATGGATTGAAGGACAATGCT+TGG 0.502036 tig0039767:+10833 Msa1458770:CDS
CACTTGGTTGTTTCAGACAT+GGG 0.502099 tig0039767:+10564 Msa1458770:CDS
AAAGATCATAATCATGATCT+GGG 0.502626 tig0039767:+10112 Msa1458770:CDS
TTCCAGCACCCTTCAAGAGT+TGG 0.503277 tig0039767:+10025 Msa1458770:CDS
AGTTAAATGATTCTGGAAAG+TGG 0.505016 tig0039767:+9618 Msa1458770:CDS
ATTCCAACAAAAGTAGCAAA+TGG 0.506439 tig0039767:-10475 None:intergenic
ACTCGTCAAATATGGATTGA+AGG 0.507225 tig0039767:+10822 Msa1458770:CDS
CTACTCCATGATCCTATGTC+AGG 0.507285 tig0039767:-11435 None:intergenic
ACAAGAGCTCGCCGGTCTGA+TGG 0.507295 tig0039767:+10717 Msa1458770:CDS
TATATCTTATGGTAATCGAA+TGG 0.509718 tig0039767:+9463 Msa1458770:CDS
ATTACCAGTTCAGTACCAAC+AGG 0.512740 tig0039767:-9347 None:intergenic
ATCAAGATGTTTCAATCCAG+AGG 0.519473 tig0039767:+10629 Msa1458770:CDS
GATAACTACCCTGTCCTAAG+AGG 0.520837 tig0039767:+10232 Msa1458770:CDS
CATGCTCATGCAGCATACTT+GGG 0.521303 tig0039767:+9917 Msa1458770:CDS
GTATGAGAAGCGTGCATCCT+GGG 0.521503 tig0039767:+10867 Msa1458770:CDS
ATGGGATTTAAAGTTCGGAT+TGG 0.522097 tig0039767:+9482 Msa1458770:CDS
GTTGTGGCAAATTAATGCAA+AGG 0.522725 tig0039767:+10693 Msa1458770:CDS
CCTCAGCATTTCTTGTCCAT+CGG 0.524241 tig0039767:-11401 None:intergenic
TACCTCCTCGGTCAAAATGT+TGG 0.526158 tig0039767:-10173 None:intergenic
TTGGCTGTAAGGCTTATTTG+AGG 0.528311 tig0039767:+10044 Msa1458770:CDS
AGATTTGTGTGTTCGAAGGA+GGG 0.530744 tig0039767:+9548 Msa1458770:CDS
ATTACCATTATCAACTTCCA+TGG 0.531538 tig0039767:-10347 None:intergenic
TCTTTGTAGACACGTGTTGA+GGG 0.535253 tig0039767:+11329 Msa1458770:CDS
TTGAAATTAATAACACCAAA+GGG 0.535464 tig0039767:-9800 None:intergenic
TTTCTTGTGATCCATACATA+GGG 0.536566 tig0039767:+9402 Msa1458770:CDS
TGTATGAGAAGCGTGCATCC+TGG 0.538953 tig0039767:+10866 Msa1458770:CDS
ATTTGGGATAATGATTGTAA+AGG 0.539019 tig0039767:+9319 None:intergenic
TCGGTCAAAATGTTGGAAGC+AGG 0.543963 tig0039767:-10166 None:intergenic
TAGAAGATTTGTGTGTTCGA+AGG 0.548021 tig0039767:+9544 Msa1458770:CDS
TCGTGAAGAAGAAAGAAAAG+AGG 0.548083 tig0039767:+11029 Msa1458770:CDS
AAGATTTGTGTGTTCGAAGG+AGG 0.548897 tig0039767:+9547 Msa1458770:CDS
GGAAGAAAATGCTTGAAGTA+GGG 0.553026 tig0039767:+9759 Msa1458770:CDS
GCATCTAAATACATAGATGC+TGG 0.554139 tig0039767:+11504 Msa1458770:CDS
TCGACTACCCACTTTCCTGA+TGG 0.556567 tig0039767:-10079 None:intergenic
TGGTTGTCCAGCATTCATAA+GGG 0.557324 tig0039767:+9592 Msa1458770:CDS
GTAAACACTGAATTGGTGAA+TGG 0.557824 tig0039767:+10193 Msa1458770:CDS
GAAGCACAGGTTGCTTGTGG+TGG 0.561382 tig0039767:-10501 None:intergenic
GTCTAGCTCCTCTTAGGACA+GGG 0.562105 tig0039767:-10240 None:intergenic
TCATGATCTGGGCCTTGGAA+CGG 0.573122 tig0039767:+10123 Msa1458770:CDS
GATTTAAAATCTATGAAGAA+GGG 0.574074 tig0039767:+11184 Msa1458770:CDS
CCAAGTATGCTGCATGAGCA+TGG 0.574108 tig0039767:-9916 None:intergenic
AATTCCTATGAAAGAAAGCA+TGG 0.575352 tig0039767:+10924 Msa1458770:CDS
GGGTAAGAGCAATGTCAGGC+CGG 0.576033 tig0039767:+10584 Msa1458770:CDS
AGATATTTGGTGCGTAAGTG+TGG 0.576360 tig0039767:+11216 Msa1458770:CDS
AATCTGAAGAATCTTTCACT+TGG 0.577117 tig0039767:+10548 Msa1458770:CDS
ACATGGGTAAGAGCAATGTC+AGG 0.578816 tig0039767:+10580 Msa1458770:CDS
GAATCAACCATCAGGAAAGT+GGG 0.580534 tig0039767:+10072 Msa1458770:CDS
AGAGCACATCCAAGAAGCAC+AGG 0.580657 tig0039767:-10514 None:intergenic
TCGATGAATTTGACGCCTCG+TGG 0.582578 tig0039767:+10791 Msa1458770:CDS
AAGAACTTGAAGTACAGGCC+AGG 0.583073 tig0039767:+9837 Msa1458770:CDS
GGAGAAAACTGTGTTGGCAC+AGG 0.583735 tig0039767:+11580 Msa1458770:CDS
TGTCAGATGTTTGAATATGA+AGG 0.583906 tig0039767:+11303 Msa1458770:CDS
CCTTACAGCCAACTCTTGAA+GGG 0.585947 tig0039767:-10033 None:intergenic
GCTTTGTGTGCTCAAAAGAA+GGG 0.587200 tig0039767:+10002 Msa1458770:CDS
CTCGCTACATCTTACACCGA+TGG 0.590796 tig0039767:+11385 Msa1458770:CDS
CAAGAAGCACAGGTTGCTTG+TGG 0.592747 tig0039767:-10504 None:intergenic
ATTGTAAAGGAGCATCCTGT+TGG 0.597584 tig0039767:+9332 Msa1458770:CDS
GCCAGGATCGAACCATATGT+TGG 0.601674 tig0039767:+9854 Msa1458770:CDS
AATGTGCCCTTTAAATAGAA+CGG 0.602152 tig0039767:-10892 None:intergenic
CTTTAAATAGAACGGAACCC+AGG 0.602743 tig0039767:-10884 None:intergenic
CTGAAGTCACTCGCAAGCCA+AGG 0.602865 tig0039767:+9738 Msa1458770:CDS
GGTAATGAGTAATGCAATTG+GGG 0.604332 tig0039767:+9364 Msa1458770:CDS
ATGAGCATGGTAAAATTGGT+AGG 0.604922 tig0039767:-9903 None:intergenic
AGCATGGAATCATTCTTTGG+TGG 0.604989 tig0039767:+10940 Msa1458770:CDS
GCAAAGGAACAAGAGCTCGC+CGG 0.611525 tig0039767:+10709 Msa1458770:CDS
AAAATGCTTGAAGTAGGGAA+TGG 0.612218 tig0039767:+9764 Msa1458770:CDS
CTTGAAATTAATAACACCAA+AGG 0.620334 tig0039767:-9801 None:intergenic
TACGCACCAAATATCTGCTG+AGG 0.623181 tig0039767:-11209 None:intergenic
CTATTACTGACAAAGGCTGC+CGG 0.623252 tig0039767:-10603 None:intergenic
CGCGGAATGAACTCTGTGAG+AGG 0.627384 tig0039767:-10982 None:intergenic
TGATCAGCTATTACTGACAA+AGG 0.628429 tig0039767:-10610 None:intergenic
AGGGTGGGAGAAAACTGTGT+TGG 0.629447 tig0039767:+11574 Msa1458770:CDS
GAACCCATTACCCATCAGAC+CGG 0.633308 tig0039767:-10728 None:intergenic
CGGTGTAAGATGTAGCGAGA+AGG 0.633470 tig0039767:-11381 None:intergenic
ACGCACCAAATATCTGCTGA+GGG 0.642827 tig0039767:-11208 None:intergenic
TCAAGATGTTTCAATCCAGA+GGG 0.646236 tig0039767:+10630 Msa1458770:CDS
AATGAGTAATGCAATTGGGG+AGG 0.656176 tig0039767:+9367 Msa1458770:CDS
TGGACAAGAAATGCTGAGGA+TGG 0.668666 tig0039767:+11405 Msa1458770:CDS
CCGATGGACAAGAAATGCTG+AGG 0.681471 tig0039767:+11401 Msa1458770:CDS
TCGAGACCTCTTTCATAACG+CGG 0.715495 tig0039767:-11000 None:intergenic
GACGAGTACAGCACTCCACG+AGG 0.756116 tig0039767:-10806 None:intergenic
TATATGATGTATCTACAACG+AGG 0.828520 tig0039767:-10432 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTAAGTTTTATATATCTTA+TGG + tig0039767:9452-9471 Msa1458770:CDS 15.0%
!!! CTTAAGTTTTATATATCTTA+TGG + tig0039767:9452-9471 Msa1458770:CDS 15.0%
!! TTGAAATTAATAACACCAAA+GGG - tig0039767:9803-9822 None:intergenic 20.0%
!!! ATATAGAAAGAGTGTTTATA+TGG + tig0039767:10450-10469 Msa1458770:CDS 20.0%
!! TTGCAAAAAAGTTTGAAAAT+TGG - tig0039767:11067-11086 None:intergenic 20.0%
!!! GATTTAAAATCTATGAAGAA+GGG + tig0039767:11184-11203 Msa1458770:CDS 20.0%
!! TTGAAATTAATAACACCAAA+GGG - tig0039767:9803-9822 None:intergenic 20.0%
!!! ATATAGAAAGAGTGTTTATA+TGG + tig0039767:10450-10469 Msa1458770:CDS 20.0%
!! TTGCAAAAAAGTTTGAAAAT+TGG - tig0039767:11067-11086 None:intergenic 20.0%
!!! GATTTAAAATCTATGAAGAA+GGG + tig0039767:11184-11203 Msa1458770:CDS 20.0%
! TATATCTTATGGTAATCGAA+TGG + tig0039767:9463-9482 Msa1458770:CDS 25.0%
! ATATCTTATGGTAATCGAAT+GGG + tig0039767:9464-9483 Msa1458770:CDS 25.0%
! CTTGAAATTAATAACACCAA+AGG - tig0039767:9804-9823 None:intergenic 25.0%
!!! TTGTTTCGTTCTAAAAATGA+CGG + tig0039767:9962-9981 Msa1458770:CDS 25.0%
!!! GATTATGATCTTTTTCAAGA+CGG - tig0039767:10105-10124 None:intergenic 25.0%
! AAAAGATCATAATCATGATC+TGG + tig0039767:10111-10130 Msa1458770:CDS 25.0%
! AAAGATCATAATCATGATCT+GGG + tig0039767:10112-10131 Msa1458770:CDS 25.0%
! AAAATCACATTAGAAGTGAT+TGG + tig0039767:10263-10282 Msa1458770:CDS 25.0%
!!! TTTTAGAGTATTTTCAGTCA+AGG + tig0039767:10296-10315 Msa1458770:CDS 25.0%
!! TAATTGCATGAGCATATTTT+GGG + tig0039767:10366-10385 Msa1458770:CDS 25.0%
!! GGATTTAAAATCTATGAAGA+AGG + tig0039767:11183-11202 Msa1458770:CDS 25.0%
! AGTTAAAAAGTTTGATGCTA+TGG + tig0039767:11466-11485 Msa1458770:CDS 25.0%
! TATATCTTATGGTAATCGAA+TGG + tig0039767:9463-9482 Msa1458770:CDS 25.0%
! ATATCTTATGGTAATCGAAT+GGG + tig0039767:9464-9483 Msa1458770:CDS 25.0%
! CTTGAAATTAATAACACCAA+AGG - tig0039767:9804-9823 None:intergenic 25.0%
!!! TTGTTTCGTTCTAAAAATGA+CGG + tig0039767:9962-9981 Msa1458770:CDS 25.0%
!!! GATTATGATCTTTTTCAAGA+CGG - tig0039767:10105-10124 None:intergenic 25.0%
! AAAAGATCATAATCATGATC+TGG + tig0039767:10111-10130 Msa1458770:CDS 25.0%
! AAAGATCATAATCATGATCT+GGG + tig0039767:10112-10131 Msa1458770:CDS 25.0%
! AAAATCACATTAGAAGTGAT+TGG + tig0039767:10263-10282 Msa1458770:CDS 25.0%
!!! TTTTAGAGTATTTTCAGTCA+AGG + tig0039767:10296-10315 Msa1458770:CDS 25.0%
!! TAATTGCATGAGCATATTTT+GGG + tig0039767:10366-10385 Msa1458770:CDS 25.0%
!! GGATTTAAAATCTATGAAGA+AGG + tig0039767:11183-11202 Msa1458770:CDS 25.0%
! AGTTAAAAAGTTTGATGCTA+TGG + tig0039767:11466-11485 Msa1458770:CDS 25.0%
! TGGTAATGAGTAATGCAATT+GGG + tig0039767:9363-9382 Msa1458770:CDS 30.0%
! TTTTCTTGTGATCCATACAT+AGG + tig0039767:9401-9420 Msa1458770:CDS 30.0%
TTTCTTGTGATCCATACATA+GGG + tig0039767:9402-9421 Msa1458770:CDS 30.0%
AAAAACTCTAACCCTATGTA+TGG - tig0039767:9416-9435 None:intergenic 30.0%
!!! AGGGTTAGAGTTTTTTAATG+CGG + tig0039767:9421-9440 Msa1458770:CDS 30.0%
! ATCGAATGGGATTTAAAGTT+CGG + tig0039767:9477-9496 Msa1458770:CDS 30.0%
TTTATCGATCGAGAACTAAT+GGG + tig0039767:9510-9529 Msa1458770:CDS 30.0%
! AGTTAAATGATTCTGGAAAG+TGG + tig0039767:9618-9637 Msa1458770:CDS 30.0%
! GTTAAATGATTCTGGAAAGT+GGG + tig0039767:9619-9638 Msa1458770:CDS 30.0%
! GGTTGTTGATCATTTTCATA+AGG + tig0039767:9640-9659 Msa1458770:CDS 30.0%
AAAAGAAGAACTTGAAGTAC+AGG + tig0039767:9832-9851 Msa1458770:CDS 30.0%
TAAAATTGGTAGGCTTCATT+AGG - tig0039767:9896-9915 None:intergenic 30.0%
ATTACCATTATCAACTTCCA+TGG - tig0039767:10350-10369 None:intergenic 30.0%
! GTAATTGCATGAGCATATTT+TGG + tig0039767:10365-10384 Msa1458770:CDS 30.0%
TATATGATGTATCTACAACG+AGG - tig0039767:10435-10454 None:intergenic 30.0%
ATTCCAACAAAAGTAGCAAA+TGG - tig0039767:10478-10497 None:intergenic 30.0%
AATCTGAAGAATCTTTCACT+TGG + tig0039767:10548-10567 Msa1458770:CDS 30.0%
AATGTGCCCTTTAAATAGAA+CGG - tig0039767:10895-10914 None:intergenic 30.0%
AATTCCTATGAAAGAAAGCA+TGG + tig0039767:10924-10943 Msa1458770:CDS 30.0%
TTCTTTGGTGGAAGTTTAAA+TGG + tig0039767:10952-10971 Msa1458770:CDS 30.0%
TAAGTGTGGAAATGATGATA+TGG + tig0039767:11230-11249 Msa1458770:CDS 30.0%
TGTCAGATGTTTGAATATGA+AGG + tig0039767:11303-11322 Msa1458770:CDS 30.0%
!! GTTGAGGGTTTTTCAAATAT+TGG + tig0039767:11344-11363 Msa1458770:CDS 30.0%
! TGGTAATGAGTAATGCAATT+GGG + tig0039767:9363-9382 Msa1458770:CDS 30.0%
! TTTTCTTGTGATCCATACAT+AGG + tig0039767:9401-9420 Msa1458770:CDS 30.0%
TTTCTTGTGATCCATACATA+GGG + tig0039767:9402-9421 Msa1458770:CDS 30.0%
AAAAACTCTAACCCTATGTA+TGG - tig0039767:9416-9435 None:intergenic 30.0%
!!! AGGGTTAGAGTTTTTTAATG+CGG + tig0039767:9421-9440 Msa1458770:CDS 30.0%
! ATCGAATGGGATTTAAAGTT+CGG + tig0039767:9477-9496 Msa1458770:CDS 30.0%
TTTATCGATCGAGAACTAAT+GGG + tig0039767:9510-9529 Msa1458770:CDS 30.0%
! AGTTAAATGATTCTGGAAAG+TGG + tig0039767:9618-9637 Msa1458770:CDS 30.0%
! GTTAAATGATTCTGGAAAGT+GGG + tig0039767:9619-9638 Msa1458770:CDS 30.0%
! GGTTGTTGATCATTTTCATA+AGG + tig0039767:9640-9659 Msa1458770:CDS 30.0%
AAAAGAAGAACTTGAAGTAC+AGG + tig0039767:9832-9851 Msa1458770:CDS 30.0%
TAAAATTGGTAGGCTTCATT+AGG - tig0039767:9896-9915 None:intergenic 30.0%
ATTACCATTATCAACTTCCA+TGG - tig0039767:10350-10369 None:intergenic 30.0%
! GTAATTGCATGAGCATATTT+TGG + tig0039767:10365-10384 Msa1458770:CDS 30.0%
TATATGATGTATCTACAACG+AGG - tig0039767:10435-10454 None:intergenic 30.0%
ATTCCAACAAAAGTAGCAAA+TGG - tig0039767:10478-10497 None:intergenic 30.0%
AATCTGAAGAATCTTTCACT+TGG + tig0039767:10548-10567 Msa1458770:CDS 30.0%
AATGTGCCCTTTAAATAGAA+CGG - tig0039767:10895-10914 None:intergenic 30.0%
AATTCCTATGAAAGAAAGCA+TGG + tig0039767:10924-10943 Msa1458770:CDS 30.0%
TTCTTTGGTGGAAGTTTAAA+TGG + tig0039767:10952-10971 Msa1458770:CDS 30.0%
TAAGTGTGGAAATGATGATA+TGG + tig0039767:11230-11249 Msa1458770:CDS 30.0%
TGTCAGATGTTTGAATATGA+AGG + tig0039767:11303-11322 Msa1458770:CDS 30.0%
!! GTTGAGGGTTTTTCAAATAT+TGG + tig0039767:11344-11363 Msa1458770:CDS 30.0%
! CTGGTAATGAGTAATGCAAT+TGG + tig0039767:9362-9381 Msa1458770:CDS 35.0%
GGTAATGAGTAATGCAATTG+GGG + tig0039767:9364-9383 Msa1458770:CDS 35.0%
! ATGGGATTTAAAGTTCGGAT+TGG + tig0039767:9482-9501 Msa1458770:CDS 35.0%
CTTTATCGATCGAGAACTAA+TGG + tig0039767:9509-9528 Msa1458770:CDS 35.0%
TAGAAGATTTGTGTGTTCGA+AGG + tig0039767:9544-9563 Msa1458770:CDS 35.0%
AGGGTTCAGTTAAATGATTC+TGG + tig0039767:9611-9630 Msa1458770:CDS 35.0%
!! CACTTTCATTTTCAAGAGTG+TGG - tig0039767:9673-9692 None:intergenic 35.0%
! ACTTCAAGCATTTTCTTCCT+TGG - tig0039767:9758-9777 None:intergenic 35.0%
AGGAAGAAAATGCTTGAAGT+AGG + tig0039767:9758-9777 Msa1458770:CDS 35.0%
GGAAGAAAATGCTTGAAGTA+GGG + tig0039767:9759-9778 Msa1458770:CDS 35.0%
AAAATGCTTGAAGTAGGGAA+TGG + tig0039767:9764-9783 Msa1458770:CDS 35.0%
ATAACACCAAAGGGAGAAAT+AGG - tig0039767:9794-9813 None:intergenic 35.0%
ATGAGCATGGTAAAATTGGT+AGG - tig0039767:9906-9925 None:intergenic 35.0%
AGGATTAAGAATCAACCATC+AGG + tig0039767:10064-10083 Msa1458770:CDS 35.0%
GTAAACACTGAATTGGTGAA+TGG + tig0039767:10193-10212 Msa1458770:CDS 35.0%
! TACAGGATTCTTTTATGCCA+TGG + tig0039767:10330-10349 Msa1458770:CDS 35.0%
!! TATGCCATGGAAGTTGATAA+TGG + tig0039767:10343-10362 Msa1458770:CDS 35.0%
AGATACTCATGTAGTCAGTT+TGG + tig0039767:10403-10422 Msa1458770:CDS 35.0%
!!! GTACCATTTGCTACTTTTGT+TGG + tig0039767:10472-10491 Msa1458770:CDS 35.0%
TGATCAGCTATTACTGACAA+AGG - tig0039767:10613-10632 None:intergenic 35.0%
ATCAAGATGTTTCAATCCAG+AGG + tig0039767:10629-10648 Msa1458770:CDS 35.0%
TCAAGATGTTTCAATCCAGA+GGG + tig0039767:10630-10649 Msa1458770:CDS 35.0%
GTTGTGGCAAATTAATGCAA+AGG + tig0039767:10693-10712 Msa1458770:CDS 35.0%
! ACTCGTCAAATATGGATTGA+AGG + tig0039767:10822-10841 Msa1458770:CDS 35.0%
TGGGTTCCGTTCTATTTAAA+GGG + tig0039767:10886-10905 Msa1458770:CDS 35.0%
GATTCCATGCTTTCTTTCAT+AGG - tig0039767:10931-10950 None:intergenic 35.0%
! GAAAGCATGGAATCATTCTT+TGG + tig0039767:10937-10956 Msa1458770:CDS 35.0%
TCGTGAAGAAGAAAGAAAAG+AGG + tig0039767:11029-11048 Msa1458770:CDS 35.0%
TTGCAGTGCTTTAGTTATCT+TGG + tig0039767:11162-11181 Msa1458770:CDS 35.0%
GCTACAACTAATGTCAAGAT+TGG - tig0039767:11283-11302 None:intergenic 35.0%
! TTTTTCCTGACATAGGATCA+TGG + tig0039767:11430-11449 Msa1458770:CDS 35.0%
GCATCTAAATACATAGATGC+TGG + tig0039767:11504-11523 Msa1458770:CDS 35.0%
! CTGGTAATGAGTAATGCAAT+TGG + tig0039767:9362-9381 Msa1458770:CDS 35.0%
GGTAATGAGTAATGCAATTG+GGG + tig0039767:9364-9383 Msa1458770:CDS 35.0%
! ATGGGATTTAAAGTTCGGAT+TGG + tig0039767:9482-9501 Msa1458770:CDS 35.0%
CTTTATCGATCGAGAACTAA+TGG + tig0039767:9509-9528 Msa1458770:CDS 35.0%
TAGAAGATTTGTGTGTTCGA+AGG + tig0039767:9544-9563 Msa1458770:CDS 35.0%
AGGGTTCAGTTAAATGATTC+TGG + tig0039767:9611-9630 Msa1458770:CDS 35.0%
!! CACTTTCATTTTCAAGAGTG+TGG - tig0039767:9673-9692 None:intergenic 35.0%
! ACTTCAAGCATTTTCTTCCT+TGG - tig0039767:9758-9777 None:intergenic 35.0%
AGGAAGAAAATGCTTGAAGT+AGG + tig0039767:9758-9777 Msa1458770:CDS 35.0%
GGAAGAAAATGCTTGAAGTA+GGG + tig0039767:9759-9778 Msa1458770:CDS 35.0%
AAAATGCTTGAAGTAGGGAA+TGG + tig0039767:9764-9783 Msa1458770:CDS 35.0%
ATAACACCAAAGGGAGAAAT+AGG - tig0039767:9794-9813 None:intergenic 35.0%
ATGAGCATGGTAAAATTGGT+AGG - tig0039767:9906-9925 None:intergenic 35.0%
AGGATTAAGAATCAACCATC+AGG + tig0039767:10064-10083 Msa1458770:CDS 35.0%
GTAAACACTGAATTGGTGAA+TGG + tig0039767:10193-10212 Msa1458770:CDS 35.0%
! TACAGGATTCTTTTATGCCA+TGG + tig0039767:10330-10349 Msa1458770:CDS 35.0%
!! TATGCCATGGAAGTTGATAA+TGG + tig0039767:10343-10362 Msa1458770:CDS 35.0%
AGATACTCATGTAGTCAGTT+TGG + tig0039767:10403-10422 Msa1458770:CDS 35.0%
!!! GTACCATTTGCTACTTTTGT+TGG + tig0039767:10472-10491 Msa1458770:CDS 35.0%
TGATCAGCTATTACTGACAA+AGG - tig0039767:10613-10632 None:intergenic 35.0%
ATCAAGATGTTTCAATCCAG+AGG + tig0039767:10629-10648 Msa1458770:CDS 35.0%
TCAAGATGTTTCAATCCAGA+GGG + tig0039767:10630-10649 Msa1458770:CDS 35.0%
GTTGTGGCAAATTAATGCAA+AGG + tig0039767:10693-10712 Msa1458770:CDS 35.0%
! ACTCGTCAAATATGGATTGA+AGG + tig0039767:10822-10841 Msa1458770:CDS 35.0%
TGGGTTCCGTTCTATTTAAA+GGG + tig0039767:10886-10905 Msa1458770:CDS 35.0%
GATTCCATGCTTTCTTTCAT+AGG - tig0039767:10931-10950 None:intergenic 35.0%
! GAAAGCATGGAATCATTCTT+TGG + tig0039767:10937-10956 Msa1458770:CDS 35.0%
TCGTGAAGAAGAAAGAAAAG+AGG + tig0039767:11029-11048 Msa1458770:CDS 35.0%
TTGCAGTGCTTTAGTTATCT+TGG + tig0039767:11162-11181 Msa1458770:CDS 35.0%
GCTACAACTAATGTCAAGAT+TGG - tig0039767:11283-11302 None:intergenic 35.0%
! TTTTTCCTGACATAGGATCA+TGG + tig0039767:11430-11449 Msa1458770:CDS 35.0%
GCATCTAAATACATAGATGC+TGG + tig0039767:11504-11523 Msa1458770:CDS 35.0%
!! ATTGTAAAGGAGCATCCTGT+TGG + tig0039767:9332-9351 Msa1458770:CDS 40.0%
ATTACCAGTTCAGTACCAAC+AGG - tig0039767:9350-9369 None:intergenic 40.0%
AATGAGTAATGCAATTGGGG+AGG + tig0039767:9367-9386 Msa1458770:CDS 40.0%
AAGATTTGTGTGTTCGAAGG+AGG + tig0039767:9547-9566 Msa1458770:CDS 40.0%
AGATTTGTGTGTTCGAAGGA+GGG + tig0039767:9548-9567 Msa1458770:CDS 40.0%
TGGTTGTCCAGCATTCATAA+GGG + tig0039767:9592-9611 Msa1458770:CDS 40.0%
AACTGAACCCTTATGAATGC+TGG - tig0039767:9602-9621 None:intergenic 40.0%
!! ATAGCTTTTGGCTGCAATGT+TGG - tig0039767:9707-9726 None:intergenic 40.0%
! GTAGAAGACTCGATAGCTTT+TGG - tig0039767:9719-9738 None:intergenic 40.0%
CTGAACTCTTGACCAACATA+TGG - tig0039767:9869-9888 None:intergenic 40.0%
CTGCATGAGCATGGTAAAAT+TGG - tig0039767:9910-9929 None:intergenic 40.0%
!!! TTGGGTTTTGGAATTCGAGT+CGG + tig0039767:9935-9954 Msa1458770:CDS 40.0%
GCTTTGTGTGCTCAAAAGAA+GGG + tig0039767:10002-10021 Msa1458770:CDS 40.0%
TTGGCTGTAAGGCTTATTTG+AGG + tig0039767:10044-10063 Msa1458770:CDS 40.0%
AGAATCAACCATCAGGAAAG+TGG + tig0039767:10071-10090 Msa1458770:CDS 40.0%
GAATCAACCATCAGGAAAGT+GGG + tig0039767:10072-10091 Msa1458770:CDS 40.0%
CAATTCAGTGTTTACCTCCT+CGG - tig0039767:10188-10207 None:intergenic 40.0%
TGGTGAATGGCGACATATTT+AGG + tig0039767:10206-10225 Msa1458770:CDS 40.0%
!! GATTTTGTCTAGCTCCTCTT+AGG - tig0039767:10249-10268 None:intergenic 40.0%
!! ATGAGCATATTTTGGGCTGA+CGG + tig0039767:10373-10392 Msa1458770:CDS 40.0%
! TCACTTGGTTGTTTCAGACA+TGG + tig0039767:10563-10582 Msa1458770:CDS 40.0%
! CACTTGGTTGTTTCAGACAT+GGG + tig0039767:10564-10583 Msa1458770:CDS 40.0%
GGCAATAGCAAAAGTCTTTC+CGG + tig0039767:10651-10670 Msa1458770:CDS 40.0%
! GAAAAGCGATGATTGGTTAC+CGG - tig0039767:10673-10692 None:intergenic 40.0%
AGTGCTGTACTCGTCAAATA+TGG + tig0039767:10814-10833 Msa1458770:CDS 40.0%
! ATGGATTGAAGGACAATGCT+TGG + tig0039767:10833-10852 Msa1458770:CDS 40.0%
CTTTAAATAGAACGGAACCC+AGG - tig0039767:10887-10906 None:intergenic 40.0%
CTGGGTTCCGTTCTATTTAA+AGG + tig0039767:10885-10904 Msa1458770:CDS 40.0%
!! TTAAAGGGCACATTTTCTGC+TGG + tig0039767:10901-10920 Msa1458770:CDS 40.0%
AGCATGGAATCATTCTTTGG+TGG + tig0039767:10940-10959 Msa1458770:CDS 40.0%
TTCATTCCGCGTTATGAAAG+AGG + tig0039767:10994-11013 Msa1458770:CDS 40.0%
!! AGATATTTGGTGCGTAAGTG+TGG + tig0039767:11216-11235 Msa1458770:CDS 40.0%
TTCTTTGTAGACACGTGTTG+AGG + tig0039767:11328-11347 Msa1458770:CDS 40.0%
TCTTTGTAGACACGTGTTGA+GGG + tig0039767:11329-11348 Msa1458770:CDS 40.0%
! GATGGTGTTTTTCCTGACAT+AGG + tig0039767:11423-11442 Msa1458770:CDS 40.0%
!! ATTGTAAAGGAGCATCCTGT+TGG + tig0039767:9332-9351 Msa1458770:CDS 40.0%
ATTACCAGTTCAGTACCAAC+AGG - tig0039767:9350-9369 None:intergenic 40.0%
AATGAGTAATGCAATTGGGG+AGG + tig0039767:9367-9386 Msa1458770:CDS 40.0%
AAGATTTGTGTGTTCGAAGG+AGG + tig0039767:9547-9566 Msa1458770:CDS 40.0%
AGATTTGTGTGTTCGAAGGA+GGG + tig0039767:9548-9567 Msa1458770:CDS 40.0%
TGGTTGTCCAGCATTCATAA+GGG + tig0039767:9592-9611 Msa1458770:CDS 40.0%
AACTGAACCCTTATGAATGC+TGG - tig0039767:9602-9621 None:intergenic 40.0%
!! ATAGCTTTTGGCTGCAATGT+TGG - tig0039767:9707-9726 None:intergenic 40.0%
! GTAGAAGACTCGATAGCTTT+TGG - tig0039767:9719-9738 None:intergenic 40.0%
CTGAACTCTTGACCAACATA+TGG - tig0039767:9869-9888 None:intergenic 40.0%
CTGCATGAGCATGGTAAAAT+TGG - tig0039767:9910-9929 None:intergenic 40.0%
!!! TTGGGTTTTGGAATTCGAGT+CGG + tig0039767:9935-9954 Msa1458770:CDS 40.0%
GCTTTGTGTGCTCAAAAGAA+GGG + tig0039767:10002-10021 Msa1458770:CDS 40.0%
TTGGCTGTAAGGCTTATTTG+AGG + tig0039767:10044-10063 Msa1458770:CDS 40.0%
AGAATCAACCATCAGGAAAG+TGG + tig0039767:10071-10090 Msa1458770:CDS 40.0%
GAATCAACCATCAGGAAAGT+GGG + tig0039767:10072-10091 Msa1458770:CDS 40.0%
CAATTCAGTGTTTACCTCCT+CGG - tig0039767:10188-10207 None:intergenic 40.0%
TGGTGAATGGCGACATATTT+AGG + tig0039767:10206-10225 Msa1458770:CDS 40.0%
!! GATTTTGTCTAGCTCCTCTT+AGG - tig0039767:10249-10268 None:intergenic 40.0%
!! ATGAGCATATTTTGGGCTGA+CGG + tig0039767:10373-10392 Msa1458770:CDS 40.0%
! TCACTTGGTTGTTTCAGACA+TGG + tig0039767:10563-10582 Msa1458770:CDS 40.0%
! CACTTGGTTGTTTCAGACAT+GGG + tig0039767:10564-10583 Msa1458770:CDS 40.0%
GGCAATAGCAAAAGTCTTTC+CGG + tig0039767:10651-10670 Msa1458770:CDS 40.0%
! GAAAAGCGATGATTGGTTAC+CGG - tig0039767:10673-10692 None:intergenic 40.0%
AGTGCTGTACTCGTCAAATA+TGG + tig0039767:10814-10833 Msa1458770:CDS 40.0%
! ATGGATTGAAGGACAATGCT+TGG + tig0039767:10833-10852 Msa1458770:CDS 40.0%
CTTTAAATAGAACGGAACCC+AGG - tig0039767:10887-10906 None:intergenic 40.0%
CTGGGTTCCGTTCTATTTAA+AGG + tig0039767:10885-10904 Msa1458770:CDS 40.0%
!! TTAAAGGGCACATTTTCTGC+TGG + tig0039767:10901-10920 Msa1458770:CDS 40.0%
AGCATGGAATCATTCTTTGG+TGG + tig0039767:10940-10959 Msa1458770:CDS 40.0%
TTCATTCCGCGTTATGAAAG+AGG + tig0039767:10994-11013 Msa1458770:CDS 40.0%
!! AGATATTTGGTGCGTAAGTG+TGG + tig0039767:11216-11235 Msa1458770:CDS 40.0%
TTCTTTGTAGACACGTGTTG+AGG + tig0039767:11328-11347 Msa1458770:CDS 40.0%
TCTTTGTAGACACGTGTTGA+GGG + tig0039767:11329-11348 Msa1458770:CDS 40.0%
! GATGGTGTTTTTCCTGACAT+AGG + tig0039767:11423-11442 Msa1458770:CDS 40.0%
CATCAGCTCAGTTCAAGAAC+TGG + tig0039767:9572-9591 Msa1458770:CDS 45.0%
CTGGTTGTCCAGCATTCATA+AGG + tig0039767:9591-9610 Msa1458770:CDS 45.0%
! GGTGAACCTATTTCTCCCTT+TGG + tig0039767:9785-9804 Msa1458770:CDS 45.0%
AAGAACTTGAAGTACAGGCC+AGG + tig0039767:9837-9856 Msa1458770:CDS 45.0%
ACCAACATATGGTTCGATCC+TGG - tig0039767:9858-9877 None:intergenic 45.0%
CATGCTCATGCAGCATACTT+GGG + tig0039767:9917-9936 Msa1458770:CDS 45.0%
! CATGCAGCATACTTGGGTTT+TGG + tig0039767:9923-9942 Msa1458770:CDS 45.0%
CGCTTTGTGTGCTCAAAAGA+AGG + tig0039767:10001-10020 Msa1458770:CDS 45.0%
CCTTACAGCCAACTCTTGAA+GGG - tig0039767:10036-10055 None:intergenic 45.0%
CATAATCATGATCTGGGCCT+TGG + tig0039767:10118-10137 Msa1458770:CDS 45.0%
TTGTCTTACGTTCCGTTCCA+AGG - tig0039767:10138-10157 None:intergenic 45.0%
TCGGTCAAAATGTTGGAAGC+AGG - tig0039767:10169-10188 None:intergenic 45.0%
!! TGCTTCCAACATTTTGACCG+AGG + tig0039767:10168-10187 Msa1458770:CDS 45.0%
!! TTCCAACATTTTGACCGAGG+AGG + tig0039767:10171-10190 Msa1458770:CDS 45.0%
TACCTCCTCGGTCAAAATGT+TGG - tig0039767:10176-10195 None:intergenic 45.0%
CGAGGAGGTAAACACTGAAT+TGG + tig0039767:10186-10205 Msa1458770:CDS 45.0%
GATAACTACCCTGTCCTAAG+AGG + tig0039767:10232-10251 Msa1458770:CDS 45.0%
TCAAGGCAAGCAGAAGATAC+AGG + tig0039767:10313-10332 Msa1458770:CDS 45.0%
ACATGGGTAAGAGCAATGTC+AGG + tig0039767:10580-10599 Msa1458770:CDS 45.0%
CTATTACTGACAAAGGCTGC+CGG - tig0039767:10606-10625 None:intergenic 45.0%
!!! AGACTTTTGCTATTGCCCTC+TGG - tig0039767:10648-10667 None:intergenic 45.0%
CCACAACGAAAAGCGATGAT+TGG - tig0039767:10680-10699 None:intergenic 45.0%
!! CCAATCATCGCTTTTCGTTG+TGG + tig0039767:10677-10696 Msa1458770:CDS 45.0%
! CGTCAAATTCATCGACTGTC+TGG - tig0039767:10786-10805 None:intergenic 45.0%
!! TGAACTCTGTGAGAGGTGTT+TGG - tig0039767:10978-10997 None:intergenic 45.0%
TCGAGACCTCTTTCATAACG+CGG - tig0039767:11003-11022 None:intergenic 45.0%
CTTCTGCACTGTTCTTCTAC+TGG - tig0039767:11099-11118 None:intergenic 45.0%
ACGCACCAAATATCTGCTGA+GGG - tig0039767:11211-11230 None:intergenic 45.0%
TACGCACCAAATATCTGCTG+AGG - tig0039767:11212-11231 None:intergenic 45.0%
CCTCAGCATTTCTTGTCCAT+CGG - tig0039767:11404-11423 None:intergenic 45.0%
TGGACAAGAAATGCTGAGGA+TGG + tig0039767:11405-11424 Msa1458770:CDS 45.0%
CTACTCCATGATCCTATGTC+AGG - tig0039767:11438-11457 None:intergenic 45.0%
! TGCCTATGAGATTTTGCGAG+AGG + tig0039767:11554-11573 Msa1458770:CDS 45.0%
! GCCTATGAGATTTTGCGAGA+GGG + tig0039767:11555-11574 Msa1458770:CDS 45.0%
ACCCTCTCGCAAAATCTCAT+AGG - tig0039767:11559-11578 None:intergenic 45.0%
! TATGAGATTTTGCGAGAGGG+TGG + tig0039767:11558-11577 Msa1458770:CDS 45.0%
! ATGAGATTTTGCGAGAGGGT+GGG + tig0039767:11559-11578 Msa1458770:CDS 45.0%
CATCAGCTCAGTTCAAGAAC+TGG + tig0039767:9572-9591 Msa1458770:CDS 45.0%
CTGGTTGTCCAGCATTCATA+AGG + tig0039767:9591-9610 Msa1458770:CDS 45.0%
! GGTGAACCTATTTCTCCCTT+TGG + tig0039767:9785-9804 Msa1458770:CDS 45.0%
AAGAACTTGAAGTACAGGCC+AGG + tig0039767:9837-9856 Msa1458770:CDS 45.0%
ACCAACATATGGTTCGATCC+TGG - tig0039767:9858-9877 None:intergenic 45.0%
CATGCTCATGCAGCATACTT+GGG + tig0039767:9917-9936 Msa1458770:CDS 45.0%
! CATGCAGCATACTTGGGTTT+TGG + tig0039767:9923-9942 Msa1458770:CDS 45.0%
CGCTTTGTGTGCTCAAAAGA+AGG + tig0039767:10001-10020 Msa1458770:CDS 45.0%
CCTTACAGCCAACTCTTGAA+GGG - tig0039767:10036-10055 None:intergenic 45.0%
CATAATCATGATCTGGGCCT+TGG + tig0039767:10118-10137 Msa1458770:CDS 45.0%
TTGTCTTACGTTCCGTTCCA+AGG - tig0039767:10138-10157 None:intergenic 45.0%
TCGGTCAAAATGTTGGAAGC+AGG - tig0039767:10169-10188 None:intergenic 45.0%
!! TGCTTCCAACATTTTGACCG+AGG + tig0039767:10168-10187 Msa1458770:CDS 45.0%
!! TTCCAACATTTTGACCGAGG+AGG + tig0039767:10171-10190 Msa1458770:CDS 45.0%
TACCTCCTCGGTCAAAATGT+TGG - tig0039767:10176-10195 None:intergenic 45.0%
CGAGGAGGTAAACACTGAAT+TGG + tig0039767:10186-10205 Msa1458770:CDS 45.0%
GATAACTACCCTGTCCTAAG+AGG + tig0039767:10232-10251 Msa1458770:CDS 45.0%
TCAAGGCAAGCAGAAGATAC+AGG + tig0039767:10313-10332 Msa1458770:CDS 45.0%
ACATGGGTAAGAGCAATGTC+AGG + tig0039767:10580-10599 Msa1458770:CDS 45.0%
CTATTACTGACAAAGGCTGC+CGG - tig0039767:10606-10625 None:intergenic 45.0%
!!! AGACTTTTGCTATTGCCCTC+TGG - tig0039767:10648-10667 None:intergenic 45.0%
CCACAACGAAAAGCGATGAT+TGG - tig0039767:10680-10699 None:intergenic 45.0%
!! CCAATCATCGCTTTTCGTTG+TGG + tig0039767:10677-10696 Msa1458770:CDS 45.0%
! CGTCAAATTCATCGACTGTC+TGG - tig0039767:10786-10805 None:intergenic 45.0%
!! TGAACTCTGTGAGAGGTGTT+TGG - tig0039767:10978-10997 None:intergenic 45.0%
TCGAGACCTCTTTCATAACG+CGG - tig0039767:11003-11022 None:intergenic 45.0%
CTTCTGCACTGTTCTTCTAC+TGG - tig0039767:11099-11118 None:intergenic 45.0%
ACGCACCAAATATCTGCTGA+GGG - tig0039767:11211-11230 None:intergenic 45.0%
TACGCACCAAATATCTGCTG+AGG - tig0039767:11212-11231 None:intergenic 45.0%
CCTCAGCATTTCTTGTCCAT+CGG - tig0039767:11404-11423 None:intergenic 45.0%
TGGACAAGAAATGCTGAGGA+TGG + tig0039767:11405-11424 Msa1458770:CDS 45.0%
CTACTCCATGATCCTATGTC+AGG - tig0039767:11438-11457 None:intergenic 45.0%
! TGCCTATGAGATTTTGCGAG+AGG + tig0039767:11554-11573 Msa1458770:CDS 45.0%
! GCCTATGAGATTTTGCGAGA+GGG + tig0039767:11555-11574 Msa1458770:CDS 45.0%
ACCCTCTCGCAAAATCTCAT+AGG - tig0039767:11559-11578 None:intergenic 45.0%
! TATGAGATTTTGCGAGAGGG+TGG + tig0039767:11558-11577 Msa1458770:CDS 45.0%
! ATGAGATTTTGCGAGAGGGT+GGG + tig0039767:11559-11578 Msa1458770:CDS 45.0%
! GCATCCTGTTGGTACTGAAC+TGG + tig0039767:9343-9362 Msa1458770:CDS 50.0%
GAGTAATGCAATTGGGGAGG+AGG + tig0039767:9370-9389 Msa1458770:CDS 50.0%
GCCAGGATCGAACCATATGT+TGG + tig0039767:9854-9873 Msa1458770:CDS 50.0%
CCAAGTATGCTGCATGAGCA+TGG - tig0039767:9919-9938 None:intergenic 50.0%
CCATGCTCATGCAGCATACT+TGG + tig0039767:9916-9935 Msa1458770:CDS 50.0%
TTCCAGCACCCTTCAAGAGT+TGG + tig0039767:10025-10044 Msa1458770:CDS 50.0%
CCCTTCAAGAGTTGGCTGTA+AGG + tig0039767:10033-10052 Msa1458770:CDS 50.0%
GCCTTACAGCCAACTCTTGA+AGG - tig0039767:10037-10056 None:intergenic 50.0%
TCGACTACCCACTTTCCTGA+TGG - tig0039767:10082-10101 None:intergenic 50.0%
TCATGATCTGGGCCTTGGAA+CGG + tig0039767:10123-10142 Msa1458770:CDS 50.0%
! GTCTAGCTCCTCTTAGGACA+GGG - tig0039767:10243-10262 None:intergenic 50.0%
! TGTCTAGCTCCTCTTAGGAC+AGG - tig0039767:10244-10263 None:intergenic 50.0%
! CAAGAAGCACAGGTTGCTTG+TGG - tig0039767:10507-10526 None:intergenic 50.0%
CACAAGCAACCTGTGCTTCT+TGG + tig0039767:10505-10524 Msa1458770:CDS 50.0%
! AGAGCACATCCAAGAAGCAC+AGG - tig0039767:10517-10536 None:intergenic 50.0%
GAACCCATTACCCATCAGAC+CGG - tig0039767:10731-10750 None:intergenic 50.0%
! ATTCATCGACTGTCTGGCTC+TGG - tig0039767:10780-10799 None:intergenic 50.0%
TCGATGAATTTGACGCCTCG+TGG + tig0039767:10791-10810 Msa1458770:CDS 50.0%
! TGTATGAGAAGCGTGCATCC+TGG + tig0039767:10866-10885 Msa1458770:CDS 50.0%
! GTATGAGAAGCGTGCATCCT+GGG + tig0039767:10867-10886 Msa1458770:CDS 50.0%
AGGGTCCCTCAGCAGATATT+TGG + tig0039767:11203-11222 Msa1458770:CDS 50.0%
CGGTGTAAGATGTAGCGAGA+AGG - tig0039767:11384-11403 None:intergenic 50.0%
CTCGCTACATCTTACACCGA+TGG + tig0039767:11385-11404 Msa1458770:CDS 50.0%
CCGATGGACAAGAAATGCTG+AGG + tig0039767:11401-11420 Msa1458770:CDS 50.0%
AGGATCATGGAGTAGCTCTC+AGG + tig0039767:11443-11462 Msa1458770:CDS 50.0%
AGGGTGGGAGAAAACTGTGT+TGG + tig0039767:11574-11593 Msa1458770:CDS 50.0%
! GGAGAAAACTGTGTTGGCAC+AGG + tig0039767:11580-11599 Msa1458770:CDS 50.0%
! GCATCCTGTTGGTACTGAAC+TGG + tig0039767:9343-9362 Msa1458770:CDS 50.0%
GAGTAATGCAATTGGGGAGG+AGG + tig0039767:9370-9389 Msa1458770:CDS 50.0%
GCCAGGATCGAACCATATGT+TGG + tig0039767:9854-9873 Msa1458770:CDS 50.0%
CCAAGTATGCTGCATGAGCA+TGG - tig0039767:9919-9938 None:intergenic 50.0%
CCATGCTCATGCAGCATACT+TGG + tig0039767:9916-9935 Msa1458770:CDS 50.0%
TTCCAGCACCCTTCAAGAGT+TGG + tig0039767:10025-10044 Msa1458770:CDS 50.0%
CCCTTCAAGAGTTGGCTGTA+AGG + tig0039767:10033-10052 Msa1458770:CDS 50.0%
GCCTTACAGCCAACTCTTGA+AGG - tig0039767:10037-10056 None:intergenic 50.0%
TCGACTACCCACTTTCCTGA+TGG - tig0039767:10082-10101 None:intergenic 50.0%
TCATGATCTGGGCCTTGGAA+CGG + tig0039767:10123-10142 Msa1458770:CDS 50.0%
! GTCTAGCTCCTCTTAGGACA+GGG - tig0039767:10243-10262 None:intergenic 50.0%
! TGTCTAGCTCCTCTTAGGAC+AGG - tig0039767:10244-10263 None:intergenic 50.0%
! CAAGAAGCACAGGTTGCTTG+TGG - tig0039767:10507-10526 None:intergenic 50.0%
CACAAGCAACCTGTGCTTCT+TGG + tig0039767:10505-10524 Msa1458770:CDS 50.0%
! AGAGCACATCCAAGAAGCAC+AGG - tig0039767:10517-10536 None:intergenic 50.0%
GAACCCATTACCCATCAGAC+CGG - tig0039767:10731-10750 None:intergenic 50.0%
! ATTCATCGACTGTCTGGCTC+TGG - tig0039767:10780-10799 None:intergenic 50.0%
TCGATGAATTTGACGCCTCG+TGG + tig0039767:10791-10810 Msa1458770:CDS 50.0%
! TGTATGAGAAGCGTGCATCC+TGG + tig0039767:10866-10885 Msa1458770:CDS 50.0%
! GTATGAGAAGCGTGCATCCT+GGG + tig0039767:10867-10886 Msa1458770:CDS 50.0%
AGGGTCCCTCAGCAGATATT+TGG + tig0039767:11203-11222 Msa1458770:CDS 50.0%
CGGTGTAAGATGTAGCGAGA+AGG - tig0039767:11384-11403 None:intergenic 50.0%
CTCGCTACATCTTACACCGA+TGG + tig0039767:11385-11404 Msa1458770:CDS 50.0%
CCGATGGACAAGAAATGCTG+AGG + tig0039767:11401-11420 Msa1458770:CDS 50.0%
AGGATCATGGAGTAGCTCTC+AGG + tig0039767:11443-11462 Msa1458770:CDS 50.0%
AGGGTGGGAGAAAACTGTGT+TGG + tig0039767:11574-11593 Msa1458770:CDS 50.0%
! GGAGAAAACTGTGTTGGCAC+AGG + tig0039767:11580-11599 Msa1458770:CDS 50.0%
CTGAAGTCACTCGCAAGCCA+AGG + tig0039767:9738-9757 Msa1458770:CDS 55.0%
! AGCCAACTCTTGAAGGGTGC+TGG - tig0039767:10030-10049 None:intergenic 55.0%
GAAGCACAGGTTGCTTGTGG+TGG - tig0039767:10504-10523 None:intergenic 55.0%
GGGTAAGAGCAATGTCAGGC+CGG + tig0039767:10584-10603 Msa1458770:CDS 55.0%
GCAAAGGAACAAGAGCTCGC+CGG + tig0039767:10709-10728 Msa1458770:CDS 55.0%
! TCGCCGGTCTGATGGGTAAT+GGG + tig0039767:10725-10744 Msa1458770:CDS 55.0%
CGCGGAATGAACTCTGTGAG+AGG - tig0039767:10985-11004 None:intergenic 55.0%
CTGAAGTCACTCGCAAGCCA+AGG + tig0039767:9738-9757 Msa1458770:CDS 55.0%
! AGCCAACTCTTGAAGGGTGC+TGG - tig0039767:10030-10049 None:intergenic 55.0%
GAAGCACAGGTTGCTTGTGG+TGG - tig0039767:10504-10523 None:intergenic 55.0%
GGGTAAGAGCAATGTCAGGC+CGG + tig0039767:10584-10603 Msa1458770:CDS 55.0%
GCAAAGGAACAAGAGCTCGC+CGG + tig0039767:10709-10728 Msa1458770:CDS 55.0%
! TCGCCGGTCTGATGGGTAAT+GGG + tig0039767:10725-10744 Msa1458770:CDS 55.0%
CGCGGAATGAACTCTGTGAG+AGG - tig0039767:10985-11004 None:intergenic 55.0%
ACAAGAGCTCGCCGGTCTGA+TGG + tig0039767:10717-10736 Msa1458770:CDS 60.0%
CAAGAGCTCGCCGGTCTGAT+GGG + tig0039767:10718-10737 Msa1458770:CDS 60.0%
! CTCGCCGGTCTGATGGGTAA+TGG + tig0039767:10724-10743 Msa1458770:CDS 60.0%
GACGAGTACAGCACTCCACG+AGG - tig0039767:10809-10828 None:intergenic 60.0%
ACAAGAGCTCGCCGGTCTGA+TGG + tig0039767:10717-10736 Msa1458770:CDS 60.0%
CAAGAGCTCGCCGGTCTGAT+GGG + tig0039767:10718-10737 Msa1458770:CDS 60.0%
! CTCGCCGGTCTGATGGGTAA+TGG + tig0039767:10724-10743 Msa1458770:CDS 60.0%
GACGAGTACAGCACTCCACG+AGG - tig0039767:10809-10828 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0039767 gene 9329 11605 9329 ID=Msa1458770;Name=Msa1458770
tig0039767 mRNA 9329 11605 9329 ID=Msa1458770-mRNA-1;Parent=Msa1458770;Name=Msa1458770-mRNA-1;_AED=0.09;_eAED=0.93;_QI=0|-1|0|1|-1|1|1|0|758
tig0039767 exon 9329 11605 9329 ID=Msa1458770-mRNA-1:exon:21918;Parent=Msa1458770-mRNA-1
tig0039767 CDS 9329 11605 9329 ID=Msa1458770-mRNA-1:cds;Parent=Msa1458770-mRNA-1
Gene Sequence

>Msa1458770

ATGATTGTAAAGGAGCATCCTGTTGGTACTGAACTGGTAATGAGTAATGCAATTGGGGAGGAGGAAATTGATTTTTCTTGTGATCCATACATAGGGTTAGAGTTTTTTAATGCGGATGACGCGCTTAAGTTTTATATATCTTATGGTAATCGAATGGGATTTAAAGTTCGGATTGGTCAACTTTATCGATCGAGAACTAATGGGTCTGTTTCTTCTAGAAGATTTGTGTGTTCGAAGGAGGGACATCAGCTCAGTTCAAGAACTGGTTGTCCAGCATTCATAAGGGTTCAGTTAAATGATTCTGGAAAGTGGGTTGTTGATCATTTTCATAAGGATCATAACCACACTCTTGAAAATGAAAGTGAAAGTTTCGCTCCAACATTGCAGCCAAAAGCTATCGAGTCTTCTACTGAAGTCACTCGCAAGCCAAGGAAGAAAATGCTTGAAGTAGGGAATGGTGAACCTATTTCTCCCTTTGGTGTTATTAATTTCAAGCGTATGAGAAAAGAAGAACTTGAAGTACAGGCCAGGATCGAACCATATGTTGGTCAAGAGTTCAGTACTCCTAATGAAGCCTACCAATTTTACCATGCTCATGCAGCATACTTGGGTTTTGGAATTCGAGTCGGTCAATTGTTTCGTTCTAAAAATGACGGATCAATTACATCTCGACGCTTTGTGTGCTCAAAAGAAGGGTTCCAGCACCCTTCAAGAGTTGGCTGTAAGGCTTATTTGAGGATTAAGAATCAACCATCAGGAAAGTGGGTAGTCGACCGTCTTGAAAAAGATCATAATCATGATCTGGGCCTTGGAACGGAACGTAAGACAAAAAGTCTTCCTGCTTCCAACATTTTGACCGAGGAGGTAAACACTGAATTGGTGAATGGCGACATATTTAGGATAGATAACTACCCTGTCCTAAGAGGAGCTAGACAAAATCACATTAGAAGTGATTGGTACAACATGCTTTTAGAGTATTTTCAGTCAAGGCAAGCAGAAGATACAGGATTCTTTTATGCCATGGAAGTTGATAATGGTAATTGCATGAGCATATTTTGGGCTGACGGAAGATCTAGATACTCATGTAGTCAGTTTGGCGATGTCCTCGTTGTAGATACATCATATAGAAAGAGTGTTTATATGGTACCATTTGCTACTTTTGTTGGAATTAACCACCACAAGCAACCTGTGCTTCTTGGATGTGCTCTAATTGCTGATGAATCTGAAGAATCTTTCACTTGGTTGTTTCAGACATGGGTAAGAGCAATGTCAGGCCGGCAGCCTTTGTCAGTAATAGCTGATCAAGATGTTTCAATCCAGAGGGCAATAGCAAAAGTCTTTCCGGTAACCAATCATCGCTTTTCGTTGTGGCAAATTAATGCAAAGGAACAAGAGCTCGCCGGTCTGATGGGTAATGGGTTCACTAAAGATTATGAAAAGTGTGTTTACCAGAGCCAGACAGTCGATGAATTTGACGCCTCGTGGAGTGCTGTACTCGTCAAATATGGATTGAAGGACAATGCTTGGCTAAAAGAAATGTATGAGAAGCGTGCATCCTGGGTTCCGTTCTATTTAAAGGGCACATTTTCTGCTGGAATTCCTATGAAAGAAAGCATGGAATCATTCTTTGGTGGAAGTTTAAATGGCCAAACACCTCTCACAGAGTTCATTCCGCGTTATGAAAGAGGTCTCGAGCGACGTCGTGAAGAAGAAAGAAAAGAGGATTTTAATACTTCCAATTTTCAAACTTTTTTGCAAACAAAAGAGCCAGTAGAAGAACAGTGCAGAAGACTTTACACTCTTGCAGTATTCAAAGTATTTCAGAAAGAGCTTTTGCAGTGCTTTAGTTATCTTGGATTTAAAATCTATGAAGAAGGGTCCCTCAGCAGATATTTGGTGCGTAAGTGTGGAAATGATGATATGGTGAAGCATGTAGTTACATTCAATGCATCCAATCTTGACATTAGTTGTAGCTGTCAGATGTTTGAATATGAAGGTGTTCTTTGTAGACACGTGTTGAGGGTTTTTCAAATATTGGAAGTAAGAGAAGTTCCTTCTCGCTACATCTTACACCGATGGACAAGAAATGCTGAGGATGGTGTTTTTCCTGACATAGGATCATGGAGTAGCTCTCAGGAGTTAAAAAGTTTGATGCTATGGAGTCTAAGAGAAACAGCATCTAAATACATAGATGCTGGTGCATCATCAATTGAAAAGTATAAACTTGCCTATGAGATTTTGCGAGAGGGTGGGAGAAAACTGTGTTGGCACAGGTGA
Protein sequence

>Msa1458770

MIVKEHPVGTELVMSNAIGEEEIDFSCDPYIGLEFFNADDALKFYISYGNRMGFKVRIGQLYRSRTNGSVSSRRFVCSKEGHQLSSRTGCPAFIRVQLNDSGKWVVDHFHKDHNHTLENESESFAPTLQPKAIESSTEVTRKPRKKMLEVGNGEPISPFGVINFKRMRKEELEVQARIEPYVGQEFSTPNEAYQFYHAHAAYLGFGIRVGQLFRSKNDGSITSRRFVCSKEGFQHPSRVGCKAYLRIKNQPSGKWVVDRLEKDHNHDLGLGTERKTKSLPASNILTEEVNTELVNGDIFRIDNYPVLRGARQNHIRSDWYNMLLEYFQSRQAEDTGFFYAMEVDNGNCMSIFWADGRSRYSCSQFGDVLVVDTSYRKSVYMVPFATFVGINHHKQPVLLGCALIADESEESFTWLFQTWVRAMSGRQPLSVIADQDVSIQRAIAKVFPVTNHRFSLWQINAKEQELAGLMGNGFTKDYEKCVYQSQTVDEFDASWSAVLVKYGLKDNAWLKEMYEKRASWVPFYLKGTFSAGIPMKESMESFFGGSLNGQTPLTEFIPRYERGLERRREEERKEDFNTSNFQTFLQTKEPVEEQCRRLYTLAVFKVFQKELLQCFSYLGFKIYEEGSLSRYLVRKCGNDDMVKHVVTFNASNLDISCSCQMFEYEGVLCRHVLRVFQILEVREVPSRYILHRWTRNAEDGVFPDIGSWSSSQELKSLMLWSLRETASKYIDAGASSIEKYKLAYEILREGGRKLCWHR*