Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171000 | XP_003600574.1 | 96.637 | 446 | 10 | 3 | 1 | 445 | 1 | 442 | 0.0 | 858 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171000 | G7IV74 | 96.637 | 446 | 10 | 3 | 1 | 445 | 1 | 442 | 0.0 | 858 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032400 | Msa1171000 | -0.804331 | 2.274211e-49 | -8.615850e-47 |
| Msa0038350 | Msa1171000 | 0.831072 | 2.054054e-55 | -8.615850e-47 |
| Msa0044810 | Msa1171000 | -0.808011 | 3.819571e-50 | -8.615850e-47 |
| Msa0048020 | Msa1171000 | -0.818205 | 2.213829e-52 | -8.615850e-47 |
| Msa0063580 | Msa1171000 | -0.801930 | 7.136458e-49 | -8.615850e-47 |
| Msa0629290 | Msa1171000 | -0.800693 | 1.278347e-48 | -8.615850e-47 |
| Msa0659800 | Msa1171000 | 0.801280 | 9.698720e-49 | -8.615850e-47 |
| Msa0694690 | Msa1171000 | 0.816748 | 4.713270e-52 | -8.615850e-47 |
| Msa0701840 | Msa1171000 | 0.805438 | 1.334988e-49 | -8.615850e-47 |
| Msa0730180 | Msa1171000 | -0.813704 | 2.237232e-51 | -8.615850e-47 |
| Msa0746600 | Msa1171000 | -0.809328 | 1.998151e-50 | -8.615850e-47 |
| Msa0141430 | Msa1171000 | -0.816526 | 5.284459e-52 | -8.615850e-47 |
| Msa0168100 | Msa1171000 | -0.805442 | 1.332555e-49 | -8.615850e-47 |
| Msa0185700 | Msa1171000 | -0.806428 | 8.266813e-50 | -8.615850e-47 |
| Msa0197900 | Msa1171000 | -0.805985 | 1.024474e-49 | -8.615850e-47 |
| Msa0200950 | Msa1171000 | 0.815330 | 9.772227e-52 | -8.615850e-47 |
| Msa0367290 | Msa1171000 | 0.860574 | 1.878163e-63 | -8.615850e-47 |
| Msa0380310 | Msa1171000 | -0.813095 | 3.043767e-51 | -8.615850e-47 |
| Msa0423360 | Msa1171000 | 0.803073 | 4.149318e-49 | -8.615850e-47 |
| Msa0459910 | Msa1171000 | 0.911150 | 8.416193e-83 | -8.615850e-47 |
| Msa0473490 | Msa1171000 | -0.805111 | 1.562862e-49 | -8.615850e-47 |
| Msa1073840 | Msa1171000 | -0.803736 | 3.023976e-49 | -8.615850e-47 |
| Msa0239660 | Msa1171000 | -0.816739 | 4.735687e-52 | -8.615850e-47 |
| Msa0258670 | Msa1171000 | 0.821099 | 4.833440e-53 | -8.615850e-47 |
| Msa0277640 | Msa1171000 | -0.815802 | 7.670680e-52 | -8.615850e-47 |
| Msa0321630 | Msa1171000 | 0.821352 | 4.225619e-53 | -8.615850e-47 |
| Msa0342200 | Msa1171000 | -0.827677 | 1.370633e-54 | -8.615850e-47 |
| Msa1151960 | Msa1171000 | -0.805982 | 1.026098e-49 | -8.615850e-47 |
| Msa1171000 | Msa1183390 | -0.834119 | 3.603152e-56 | -8.615850e-47 |
| Msa1171000 | Msa1222580 | -0.821283 | 4.383998e-53 | -8.615850e-47 |
| Msa1171000 | Msa1223460 | -0.804332 | 2.272807e-49 | -8.615850e-47 |
| Msa1171000 | Msa1229050 | -0.820101 | 8.192599e-53 | -8.615850e-47 |
| Msa1171000 | Msa1271490 | -0.819732 | 9.949799e-53 | -8.615850e-47 |
| Msa1171000 | Msa1271510 | -0.831579 | 1.540926e-55 | -8.615850e-47 |
| Msa1171000 | Msa1280120 | -0.803715 | 3.054153e-49 | -8.615850e-47 |
| Msa1171000 | Msa1309360 | -0.830065 | 3.622218e-55 | -8.615850e-47 |
| Msa1171000 | Msa1404370 | -0.815096 | 1.101205e-51 | -8.615850e-47 |
| Msa1171000 | Msa1430760 | -0.816752 | 4.704082e-52 | -8.615850e-47 |
| Msa1171000 | Msa1447230 | -0.818896 | 1.542647e-52 | -8.615850e-47 |
| Msa0506620 | Msa1171000 | 0.885015 | 1.169617e-71 | -8.615850e-47 |
| Msa0526640 | Msa1171000 | 0.833664 | 4.684668e-56 | -8.615850e-47 |
| Msa0527600 | Msa1171000 | -0.803768 | 2.977893e-49 | -8.615850e-47 |
| Msa0532100 | Msa1171000 | 0.800700 | 1.274571e-48 | -8.615850e-47 |
| Msa0546380 | Msa1171000 | -0.806780 | 6.967409e-50 | -8.615850e-47 |
| Msa0890250 | Msa1171000 | -0.807192 | 5.700332e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171000 | MtrunA17_Chr3g0108551 | 96.637 | 446 | 10 | 3 | 1 | 445 | 1 | 442 | 0.0 | 858 |
| Msa1171000 | MtrunA17_Chr7g0245331 | 47.884 | 378 | 166 | 10 | 1 | 373 | 1 | 352 | 2.67e-93 | 287 |
| Msa1171000 | MtrunA17_Chr8g0334431 | 58.791 | 182 | 61 | 4 | 213 | 380 | 132 | 313 | 4.07e-58 | 194 |
| Msa1171000 | MtrunA17_Chr7g0259821 | 34.263 | 251 | 131 | 5 | 147 | 378 | 53 | 288 | 2.69e-30 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1171000 | AT2G30530.1 | 59.627 | 322 | 98 | 8 | 52 | 371 | 57 | 348 | 2.31e-98 | 300 |
| Msa1171000 | AT5G01970.1 | 55.363 | 289 | 111 | 4 | 87 | 371 | 35 | 309 | 4.59e-95 | 290 |
| Msa1171000 | AT5G01970.2 | 64.623 | 212 | 70 | 3 | 164 | 371 | 2 | 212 | 4.13e-84 | 259 |
| Msa1171000 | AT1G30050.1 | 46.011 | 376 | 126 | 10 | 1 | 370 | 1 | 305 | 7.20e-82 | 258 |
| Msa1171000 | AT4G02800.1 | 36.098 | 205 | 119 | 2 | 161 | 355 | 79 | 281 | 2.40e-32 | 125 |
Find 135 sgRNAs with CRISPR-Local
Find 495 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTAAGTGATTCGAATTT+TGG | 0.069894 | 8_1:+421917 | None:intergenic |
| TCTTCGCTTTCGTCGCTTTA+TGG | 0.109391 | 8_1:-424372 | Msa1171000:CDS |
| CTTTATATCCTTTCCTGATA+TGG | 0.141349 | 8_1:+417914 | None:intergenic |
| CTCCTTGCGTTGGCGACATC+TGG | 0.173544 | 8_1:+421447 | None:intergenic |
| GTCCCAGGTATTTCAGATTC+TGG | 0.193774 | 8_1:+422565 | None:intergenic |
| GCGACATCTGGGACCGCAAC+TGG | 0.216020 | 8_1:+421459 | None:intergenic |
| AATTCAACCTCCTCGAATTC+TGG | 0.234711 | 8_1:+424585 | None:intergenic |
| ATGAGCCCAAGAGTGGATTT+TGG | 0.240487 | 8_1:-422639 | Msa1171000:CDS |
| GGACAGTCCGACAATTATTA+AGG | 0.278402 | 8_1:-421878 | Msa1171000:CDS |
| GAAGAAGACGGTGTAATAAT+TGG | 0.289785 | 8_1:+424477 | None:intergenic |
| CCAAAGCAAAACTGCTTCTT+CGG | 0.293791 | 8_1:-420145 | Msa1171000:CDS |
| GACGGTGTAATAATTGGATT+AGG | 0.303446 | 8_1:+424483 | None:intergenic |
| TGGCACCATTGGTAAATCTT+TGG | 0.322461 | 8_1:-421818 | Msa1171000:CDS |
| GGCATTTCATCTCCCATATC+AGG | 0.332511 | 8_1:-417927 | Msa1171000:CDS |
| TGGCATCTGAAGACATTGAT+AGG | 0.340914 | 8_1:+417979 | None:intergenic |
| TGGTGAGTGGTGGTTCGATT+TGG | 0.341571 | 8_1:+424683 | None:intergenic |
| TTAGAATCGAGGGGCATAAT+AGG | 0.343574 | 8_1:+418020 | None:intergenic |
| TTTATATCCTTTCCTGATAT+GGG | 0.343848 | 8_1:+417915 | None:intergenic |
| GGTGAGTGGTGGTTCGATTT+GGG | 0.353805 | 8_1:+424684 | None:intergenic |
| ACCGTCACCGACGAAGATTC+TGG | 0.367346 | 8_1:-424661 | Msa1171000:five_prime_UTR |
| TTCTGATCCCATGCCAAGAT+TGG | 0.373653 | 8_1:+417959 | None:intergenic |
| TAGCCAAGATGATGATGATT+TGG | 0.376397 | 8_1:-420021 | Msa1171000:intron |
| CGTTGACACTTCTTCAACTT+CGG | 0.385273 | 8_1:-424442 | Msa1171000:CDS |
| GATCCAATCGAAACGGTTAT+CGG | 0.393070 | 8_1:+424607 | None:intergenic |
| AGGAAACCCGTAAACATATC+AGG | 0.396756 | 8_1:-421547 | Msa1171000:CDS |
| CGACATCTGGGACCGCAACT+GGG | 0.398383 | 8_1:+421460 | None:intergenic |
| CCAAAATTCGAATCACTTAG+AGG | 0.398799 | 8_1:-421917 | Msa1171000:CDS |
| GAAGACTGTCAAGGCTGATC+TGG | 0.400598 | 8_1:-420117 | Msa1171000:CDS |
| TAAAGCTATTAGAGCTTCTT+CGG | 0.429020 | 8_1:-424406 | Msa1171000:CDS |
| CAAAGCAAAACTGCTTCTTC+GGG | 0.430445 | 8_1:-420144 | Msa1171000:CDS |
| TCCAGAATCTTCGTCGGTGA+CGG | 0.436466 | 8_1:+424660 | None:intergenic |
| AACGCCCCAAAATCCACTCT+TGG | 0.436480 | 8_1:+422633 | None:intergenic |
| TAGGACTTCAGATATCATTC+AGG | 0.441846 | 8_1:-421567 | Msa1171000:CDS |
| GACAGTCCGACAATTATTAA+GGG | 0.445266 | 8_1:-421877 | Msa1171000:CDS |
| TCCTTGCGTTGGCGACATCT+GGG | 0.451239 | 8_1:+421448 | None:intergenic |
| ACGGTGTAATAATTGGATTA+GGG | 0.453368 | 8_1:+424484 | None:intergenic |
| ACATCTTCTCTTACTCATAT+CGG | 0.454109 | 8_1:-421841 | Msa1171000:CDS |
| TGCATTTAGTGCTTGTCAAA+CGG | 0.454393 | 8_1:-417571 | Msa1171000:three_prime_UTR |
| TAGAGGAGGGCAATCTCAAA+AGG | 0.454947 | 8_1:-421900 | Msa1171000:CDS |
| TCTAATCCCTTAATAATTGT+CGG | 0.472952 | 8_1:+421871 | None:intergenic |
| AAGAGCATCTCTTCTATAGC+TGG | 0.472982 | 8_1:-417849 | Msa1171000:CDS |
| CTCCCCTTTCGCGATTTACA+CGG | 0.478421 | 8_1:+420045 | None:intergenic |
| ATGTCTTCAGATGCCAATCT+TGG | 0.479100 | 8_1:-417972 | Msa1171000:CDS |
| GAACTTTGTAGGACAGAGTC+AGG | 0.482745 | 8_1:-421513 | Msa1171000:CDS |
| GTTCTTGCAACGTTGTAGAA+TGG | 0.485883 | 8_1:+421483 | None:intergenic |
| TTTCCCCTTGATGTTACGCC+AGG | 0.486371 | 8_1:+422526 | None:intergenic |
| AATATCCTGGCGTAACATCA+AGG | 0.490768 | 8_1:-422531 | Msa1171000:CDS |
| ACTCATATCGGTGGCACCAT+TGG | 0.490889 | 8_1:-421829 | Msa1171000:CDS |
| ATACCAAATCATCATCATCT+TGG | 0.501866 | 8_1:+420018 | None:intergenic |
| CAAAACCGCGCTGAGCGTTA+CGG | 0.503784 | 8_1:-424632 | Msa1171000:five_prime_UTR |
| TCGAGGGGCATAATAGGCAC+TGG | 0.503893 | 8_1:+418026 | None:intergenic |
| TATTGTGACCTTGTTGTCCC+AGG | 0.505682 | 8_1:+422550 | None:intergenic |
| CGAGGGGCATAATAGGCACT+GGG | 0.508411 | 8_1:+418027 | None:intergenic |
| TTTGGGATCCGATCATGAAC+CGG | 0.510340 | 8_1:+424701 | None:intergenic |
| ACGCCCCAAAATCCACTCTT+GGG | 0.513772 | 8_1:+422634 | None:intergenic |
| GTGCCGATAACCGTTTCGAT+TGG | 0.514166 | 8_1:-424610 | Msa1171000:five_prime_UTR |
| CACCATTGGTAAATCTTTGG+AGG | 0.517755 | 8_1:-421815 | Msa1171000:intron |
| CCGTCTTCTTCGAGTAATGA+TGG | 0.518729 | 8_1:-424465 | Msa1171000:CDS |
| GATGGAGGAGCAGTAGGAGT+AGG | 0.521685 | 8_1:+424318 | None:intergenic |
| GTGAAGAACTCTGATGCGAC+CGG | 0.523618 | 8_1:+424751 | None:intergenic |
| CTGAAATACCTGGGACAACA+AGG | 0.524496 | 8_1:-422558 | Msa1171000:CDS |
| TTGGAGGATGGAGGAGCAGT+AGG | 0.525146 | 8_1:+424312 | None:intergenic |
| TACTGCTCCTCCATCCTCCA+AGG | 0.525395 | 8_1:-424310 | Msa1171000:intron |
| CAGAGAGAGACCTTGGAGGA+TGG | 0.525442 | 8_1:+424300 | None:intergenic |
| TCTAGCTGAGAAAGCTCGCT+TGG | 0.528045 | 8_1:-418189 | Msa1171000:CDS |
| CCTCCGTGTAAATCGCGAAA+GGG | 0.528321 | 8_1:-420048 | Msa1171000:CDS |
| ATATAAATAACAGATCATAA+AGG | 0.529068 | 8_1:+417776 | None:intergenic |
| TTCAGATGCCAATCTTGGCA+TGG | 0.533283 | 8_1:-417967 | Msa1171000:CDS |
| TATTCACACCGGTTCATGAT+CGG | 0.537139 | 8_1:-424709 | Msa1171000:five_prime_UTR |
| TCCCAGATGTCGCCAACGCA+AGG | 0.538434 | 8_1:-421449 | Msa1171000:CDS |
| GATTTCGTTGCAGGTTGCAA+TGG | 0.540974 | 8_1:-420177 | Msa1171000:intron |
| CATCTCTTCTATAGCTGGAA+AGG | 0.547815 | 8_1:-417844 | Msa1171000:CDS |
| AGTTCTTGATCTCCTTGCGT+TGG | 0.549331 | 8_1:+421437 | None:intergenic |
| CTCTGTCCTACAAAGTTCCC+AGG | 0.551784 | 8_1:+421518 | None:intergenic |
| ACACCAGAATCTGAAATACC+TGG | 0.553757 | 8_1:-422568 | Msa1171000:CDS |
| ATATCATCAACTTACGATGC+AGG | 0.555351 | 8_1:-418111 | Msa1171000:CDS |
| TCAGATGCCAATCTTGGCAT+GGG | 0.561084 | 8_1:-417966 | Msa1171000:CDS |
| ATATCCTGGCGTAACATCAA+GGG | 0.567253 | 8_1:-422530 | Msa1171000:CDS |
| TCGATTGGATCCAGAATTCG+AGG | 0.568019 | 8_1:-424595 | Msa1171000:five_prime_UTR |
| GCGTATAGAAGGAGACAATA+CGG | 0.571739 | 8_1:-424555 | Msa1171000:CDS |
| GATTCTTCCAGAATCTTCGT+CGG | 0.572050 | 8_1:+424654 | None:intergenic |
| GGCTGATCTGGCATTTGCAA+AGG | 0.572702 | 8_1:-420105 | Msa1171000:CDS |
| GAGTTCTGAGGTGATTGTAA+AGG | 0.573419 | 8_1:-417892 | Msa1171000:CDS |
| GGCATCTGAAGACATTGATA+GGG | 0.575152 | 8_1:+417980 | None:intergenic |
| AAAACAGAGAGAGACCTTGG+AGG | 0.577477 | 8_1:+424296 | None:intergenic |
| ACAACAAGGTCACAATATCC+TGG | 0.578035 | 8_1:-422544 | Msa1171000:CDS |
| CTCGTGAGAATCGCTTTCTG+AGG | 0.578990 | 8_1:-418145 | Msa1171000:CDS |
| TGAGAATCGCTTTCTGAGGG+AGG | 0.579459 | 8_1:-418141 | Msa1171000:CDS |
| GTTGCAGGTTGCAATGGCAA+TGG | 0.581158 | 8_1:-420171 | Msa1171000:intron |
| TTCATCTCCCATATCAGGAA+AGG | 0.581530 | 8_1:-417922 | Msa1171000:CDS |
| AGAGGAGGGCAATCTCAAAA+GGG | 0.582424 | 8_1:-421899 | Msa1171000:CDS |
| TCGGGAGTTGAAGACTGTCA+AGG | 0.584666 | 8_1:-420126 | Msa1171000:CDS |
| GACATCTGGGACCGCAACTG+GGG | 0.584957 | 8_1:+421461 | None:intergenic |
| TGAAGAACTCTGATGCGACC+GGG | 0.585556 | 8_1:+424752 | None:intergenic |
| TCTTCTATAGCTGGAAAGGA+CGG | 0.587921 | 8_1:-417840 | Msa1171000:CDS |
| CTCCGTGTAAATCGCGAAAG+GGG | 0.587932 | 8_1:-420047 | Msa1171000:CDS |
| TGAAGACATTGATAGGGATG+TGG | 0.588765 | 8_1:+417986 | None:intergenic |
| AGACGGAGTATTAGAATCGA+GGG | 0.589106 | 8_1:+418010 | None:intergenic |
| AGATCAAGAACTTCAGCTGA+AGG | 0.589254 | 8_1:-421426 | Msa1171000:CDS |
| ACTGACGCTTCAGTGTATCA+TGG | 0.589482 | 8_1:+417617 | None:intergenic |
| GCTTCGTCTTCGAAAAGCGA+AGG | 0.592367 | 8_1:+424516 | None:intergenic |
| AATTCGAATCACTTAGAGGA+GGG | 0.593525 | 8_1:-421913 | Msa1171000:CDS |
| TCCTCCGTGTAAATCGCGAA+AGG | 0.600826 | 8_1:-420049 | Msa1171000:CDS |
| AGAATCTTCGTCGGTGACGG+TGG | 0.601747 | 8_1:+424663 | None:intergenic |
| TGGCGTAACATCAAGGGGAA+AGG | 0.601994 | 8_1:-422524 | Msa1171000:intron |
| TCGTGAGAATCGCTTTCTGA+GGG | 0.604235 | 8_1:-418144 | Msa1171000:CDS |
| AATTCTGGATCCAATCGAAA+CGG | 0.606576 | 8_1:+424600 | None:intergenic |
| GAAAGCAAAATCAATCATTG+AGG | 0.606900 | 8_1:-422602 | Msa1171000:CDS |
| CACCAGAATCTGAAATACCT+GGG | 0.610375 | 8_1:-422567 | Msa1171000:CDS |
| AGAGAGACCTTGGAGGATGG+AGG | 0.619651 | 8_1:+424303 | None:intergenic |
| TGAAAATTGATTATTCACAC+CGG | 0.624163 | 8_1:-424720 | Msa1171000:five_prime_UTR |
| AAATTGAATGAGCCCAAGAG+TGG | 0.624865 | 8_1:-422646 | Msa1171000:CDS |
| ATTGATAGGGATGTGGCAGA+CGG | 0.626543 | 8_1:+417993 | None:intergenic |
| TCGTCGGTGACGGTGGTGAG+TGG | 0.633571 | 8_1:+424670 | None:intergenic |
| GGATCGATGTGCTCAACTAG+AGG | 0.635385 | 8_1:-420084 | Msa1171000:CDS |
| CCCTTTCGCGATTTACACGG+AGG | 0.635650 | 8_1:+420048 | None:intergenic |
| TATCCTGGCGTAACATCAAG+GGG | 0.637290 | 8_1:-422529 | Msa1171000:CDS |
| CGTTGCAAGAACCCCAGTTG+CGG | 0.640459 | 8_1:-421472 | Msa1171000:CDS |
| AAAGGATATAAAGAGTTCTG+AGG | 0.642104 | 8_1:-417904 | Msa1171000:CDS |
| CAGACGGAGTATTAGAATCG+AGG | 0.646425 | 8_1:+418009 | None:intergenic |
| TTGATGTGATGTAATAAACC+CGG | 0.651997 | 8_1:-424770 | None:intergenic |
| TCGGTGACGGTGGTGAGTGG+TGG | 0.655586 | 8_1:+424673 | None:intergenic |
| CACCTCCAAAGATTTACCAA+TGG | 0.660310 | 8_1:+421813 | None:intergenic |
| GTAGGAGTAGGTTGAGACCG+CGG | 0.663912 | 8_1:+424330 | None:intergenic |
| AAATTCGAATCACTTAGAGG+AGG | 0.665089 | 8_1:-421914 | Msa1171000:CDS |
| TCTTCTCTTACTCATATCGG+TGG | 0.669381 | 8_1:-421838 | Msa1171000:CDS |
| ATGGGATCAGAATTAACAAG+AGG | 0.670588 | 8_1:-417948 | Msa1171000:CDS |
| CCATCATTACTCGAAGAAGA+CGG | 0.678461 | 8_1:+424465 | None:intergenic |
| CGGCACCGTAACGCTCAGCG+CGG | 0.702180 | 8_1:+424627 | None:intergenic |
| ACTCTAATCTCTCTTCTCCG+CGG | 0.708525 | 8_1:-424347 | Msa1171000:CDS |
| GACGGAGTATTAGAATCGAG+GGG | 0.708812 | 8_1:+418011 | None:intergenic |
| ATTGGATCCAGAATTCGAGG+AGG | 0.717949 | 8_1:-424592 | Msa1171000:five_prime_UTR |
| AGGGGCATAATAGGCACTGG+GGG | 0.728448 | 8_1:+418029 | None:intergenic |
| GTACTTAGACGAGAGCAATG+AGG | 0.740298 | 8_1:-418081 | Msa1171000:CDS |
| GAGGGGCATAATAGGCACTG+GGG | 0.777820 | 8_1:+418028 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATAGTTTTTTTAAAGA+TGG | - | chr8_1:418160-418179 | Msa1171000:CDS | 10.0% |
| !! | GAAAAATAAACAAAAAAATA+AGG | + | chr8_1:419200-419219 | None:intergenic | 10.0% |
| !!! | TGAATAATCAATTTTCAATA+GGG | + | chr8_1:417564-417583 | None:intergenic | 15.0% |
| !!! | ATCAAGTACTATTTTTTTAA+TGG | + | chr8_1:418420-418439 | None:intergenic | 15.0% |
| !!! | ATTTTTCCAAGTTTTTTTTT+TGG | + | chr8_1:418632-418651 | None:intergenic | 15.0% |
| !! | AAAAAAAAAACTTGGAAAAA+TGG | - | chr8_1:418631-418650 | Msa1171000:intron | 15.0% |
| !! | ATCAATAATTAAATAAAGCT+GGG | + | chr8_1:419295-419314 | None:intergenic | 15.0% |
| !! | ATCAATAATTAAATAAAGCT+GGG | + | chr8_1:419295-419314 | None:intergenic | 15.0% |
| !! | ATATCAAATAAAAAGAAAGA+AGG | - | chr8_1:420077-420096 | Msa1171000:CDS | 15.0% |
| !! | ATAAGTAAAAAACTTATAAG+TGG | + | chr8_1:420519-420538 | None:intergenic | 15.0% |
| !!! | TTTTAAAAACAAACAACATA+GGG | + | chr8_1:420985-421004 | None:intergenic | 15.0% |
| !!! | ATTTTAAAAACAAACAACAT+AGG | + | chr8_1:420986-421005 | None:intergenic | 15.0% |
| !! | AAGACAAAGAATAAAAATAA+TGG | + | chr8_1:421446-421465 | None:intergenic | 15.0% |
| !!! | CAAATGTTATTTGTAATTTT+AGG | + | chr8_1:421476-421495 | None:intergenic | 15.0% |
| !!! | TAATTACAAAATACCTTTTT+TGG | - | chr8_1:422487-422506 | Msa1171000:intron | 15.0% |
| !!! | AAATGAAATTTTAGATTAAG+GGG | + | chr8_1:423633-423652 | None:intergenic | 15.0% |
| !!! | CAAATGAAATTTTAGATTAA+GGG | + | chr8_1:423634-423653 | None:intergenic | 15.0% |
| !! | TTAGTTAAACACATATTATA+TGG | - | chr8_1:423693-423712 | Msa1171000:intron | 15.0% |
| !! | CATTAAAATACAGAAAATTT+AGG | + | chr8_1:424037-424056 | None:intergenic | 15.0% |
| !! | ATATAAATAACAGATCATAA+AGG | + | chr8_1:424514-424533 | None:intergenic | 15.0% |
| !!! | GTGAATAATCAATTTTCAAT+AGG | + | chr8_1:417565-417584 | None:intergenic | 20.0% |
| !!! | AAGTTTTTTTTTTGGAAACT+CGG | + | chr8_1:418624-418643 | None:intergenic | 20.0% |
| !! | GAAAAATGGAAAACTATTTA+CGG | - | chr8_1:418645-418664 | Msa1171000:intron | 20.0% |
| !! | AAAAATGGAAAACTATTTAC+GGG | - | chr8_1:418646-418665 | Msa1171000:intron | 20.0% |
| !!! | ACATACTTAAAAGAACTTTT+TGG | + | chr8_1:418945-418964 | None:intergenic | 20.0% |
| !! | CATCAATAATTAAATAAAGC+TGG | + | chr8_1:419272-419291 | None:intergenic | 20.0% |
| !! | CATCAATAATTAAATAAAGC+TGG | + | chr8_1:419272-419291 | None:intergenic | 20.0% |
| !!! | ATTTTGCATTACAACAAATT+TGG | + | chr8_1:419360-419379 | None:intergenic | 20.0% |
| !!! | AGATCTATTTGTTACAATTA+TGG | - | chr8_1:419397-419416 | Msa1171000:intron | 20.0% |
| !!! | CTTTTTCTGCAAAAAAATTT+TGG | - | chr8_1:419847-419866 | Msa1171000:intron | 20.0% |
| !!! | AAAATTTTGGTAACATAATG+TGG | - | chr8_1:419860-419879 | Msa1171000:intron | 20.0% |
| !! | TTGTATAGATTAGAATGTTA+AGG | - | chr8_1:420000-420019 | Msa1171000:intron | 20.0% |
| !!! | TATCAGTTTTAGATTAGAAA+TGG | - | chr8_1:420189-420208 | Msa1171000:intron | 20.0% |
| !!! | TTATTTTTGAACCATGAAAT+TGG | - | chr8_1:420321-420340 | Msa1171000:intron | 20.0% |
| !! | AAGAATTGTGATACTATTAA+AGG | - | chr8_1:421106-421125 | Msa1171000:intron | 20.0% |
| !! | ATTTGCTTCATAGAATAAAT+CGG | + | chr8_1:421236-421255 | None:intergenic | 20.0% |
| !! | TTAATATATGGTATTTCAAG+AGG | + | chr8_1:421334-421353 | None:intergenic | 20.0% |
| !! | AAACACAGATCTTTAATATA+TGG | + | chr8_1:421346-421365 | None:intergenic | 20.0% |
| !!! | GTTTTAAACATACATCAATA+TGG | + | chr8_1:421396-421415 | None:intergenic | 20.0% |
| !!! | ATATATTTTTGCTTTAGATG+AGG | + | chr8_1:421578-421597 | None:intergenic | 20.0% |
| !!! | TAATTTTTGACACAAGTAAT+CGG | - | chr8_1:421600-421619 | Msa1171000:intron | 20.0% |
| !! | AGATATTTACAGATGATTAT+AGG | + | chr8_1:421737-421756 | None:intergenic | 20.0% |
| !!! | AATAATTTGGTGTTAGTTTT+AGG | - | chr8_1:421846-421865 | Msa1171000:CDS | 20.0% |
| !! | AAGTACTATATATCCAAAAA+AGG | + | chr8_1:422503-422522 | None:intergenic | 20.0% |
| !! | ATGATTGTTGTCTATTAAAT+TGG | - | chr8_1:422745-422764 | Msa1171000:intron | 20.0% |
| !!! | GTCAAAATAACATGATTTTT+TGG | + | chr8_1:422987-423006 | None:intergenic | 20.0% |
| !! | ATACATAAAGCAGTAAATTA+TGG | + | chr8_1:423056-423075 | None:intergenic | 20.0% |
| !! | GAAAACAAGAAAAATGAAAA+TGG | - | chr8_1:423083-423102 | Msa1171000:intron | 20.0% |
| !! | AATTGAACTCTGAATATTTA+AGG | + | chr8_1:423169-423188 | None:intergenic | 20.0% |
| !!! | AGTTCAATTATTTTAAAGCT+GGG | - | chr8_1:423180-423199 | Msa1171000:intron | 20.0% |
| !!! | GCAAATGAAATTTTAGATTA+AGG | + | chr8_1:423635-423654 | None:intergenic | 20.0% |
| !!! | GTTTTCTAGATAATATCATA+TGG | - | chr8_1:423657-423676 | Msa1171000:intron | 20.0% |
| !! | AAATTAGAGTTGAGAAAAAA+GGG | + | chr8_1:423789-423808 | None:intergenic | 20.0% |
| !!! | TTTTTTAGTTACGCAATATA+AGG | + | chr8_1:424587-424606 | None:intergenic | 20.0% |
| ! | TGAAAATTGATTATTCACAC+CGG | - | chr8_1:417567-417586 | Msa1171000:three_prime_UTR | 25.0% |
| ! | GAGTTTCCAAAAAAAAAACT+TGG | - | chr8_1:418623-418642 | Msa1171000:intron | 25.0% |
| !! | TAAAGGATCATACCTTTTAT+TGG | - | chr8_1:418707-418726 | Msa1171000:intron | 25.0% |
| ! | CATATACAATGGGTATATAT+GGG | - | chr8_1:418812-418831 | Msa1171000:intron | 25.0% |
| ! | TATATATGGGCAATTCAAAT+CGG | - | chr8_1:418825-418844 | Msa1171000:intron | 25.0% |
| !! | GAAAAAAAATCCCTCTTTTA+AGG | + | chr8_1:418975-418994 | None:intergenic | 25.0% |
| ! | AATATACTATAGCAAGAGAA+AGG | + | chr8_1:419050-419069 | None:intergenic | 25.0% |
| !! | TTTCTCTTGCTATAGTATAT+TGG | - | chr8_1:419049-419068 | Msa1171000:intron | 25.0% |
| !! | TAATTTTGCTAAACATAGTG+CGG | - | chr8_1:419570-419589 | Msa1171000:intron | 25.0% |
| !!! | AATTTTTTTGCAGAAAAAGC+TGG | + | chr8_1:419846-419865 | None:intergenic | 25.0% |
| !! | AGATATTTTCCTGAAAAAGT+TGG | - | chr8_1:419975-419994 | Msa1171000:intron | 25.0% |
| !!! | TATACAATTCCAACTTTTTC+AGG | + | chr8_1:419987-420006 | None:intergenic | 25.0% |
| ! | GAAGGAGAAATACATATAAA+AGG | - | chr8_1:420095-420114 | Msa1171000:CDS | 25.0% |
| ! | GAGAAATACATATAAAAGGA+AGG | - | chr8_1:420099-420118 | Msa1171000:CDS | 25.0% |
| ! | ATACATATAAAAGGAAGGTA+AGG | - | chr8_1:420104-420123 | Msa1171000:CDS | 25.0% |
| !! | TTCTAATCTAAAACTGATAC+TGG | + | chr8_1:420188-420207 | None:intergenic | 25.0% |
| ! | ATATTAGCAGAACATCAAAT+GGG | - | chr8_1:420228-420247 | Msa1171000:intron | 25.0% |
| ! | TTAAGCGAAAATGATGTATA+TGG | + | chr8_1:420257-420276 | None:intergenic | 25.0% |
| ! | TCTAATCCCTTAATAATTGT+CGG | + | chr8_1:420419-420438 | None:intergenic | 25.0% |
| !! | TTTTTACTTATGCAATAGAC+AGG | - | chr8_1:420528-420547 | Msa1171000:intron | 25.0% |
| !! | TTTTACTTATGCAATAGACA+GGG | - | chr8_1:420529-420548 | Msa1171000:intron | 25.0% |
| ! | ACTCAGAAGTTCAAAATAAT+AGG | + | chr8_1:420597-420616 | None:intergenic | 25.0% |
| !! | GTTTTACAATTGTTGAGAAT+AGG | - | chr8_1:420701-420720 | Msa1171000:intron | 25.0% |
| ! | AAAACACATGCAAAAATTTG+AGG | + | chr8_1:421017-421036 | None:intergenic | 25.0% |
| !! | ATTATACTGCATTTTTGTGT+TGG | - | chr8_1:421043-421062 | Msa1171000:intron | 25.0% |
| ! | GTCTATCATGATACTATTAA+AGG | - | chr8_1:421150-421169 | Msa1171000:intron | 25.0% |
| ! | ATGAAGCAAATACATAGATA+TGG | - | chr8_1:421245-421264 | Msa1171000:intron | 25.0% |
| !! | TCTAATTTTCTGATGACAAA+GGG | - | chr8_1:421541-421560 | Msa1171000:CDS | 25.0% |
| ! | GATATATTGAATGAAACTAG+AGG | + | chr8_1:421647-421666 | None:intergenic | 25.0% |
| ! | TAATCATCTGTAAATATCTG+AGG | - | chr8_1:421738-421757 | Msa1171000:intron | 25.0% |
| !! | TTTTTACGGCTCTTATATTT+TGG | - | chr8_1:421893-421912 | Msa1171000:CDS | 25.0% |
| !!! | TCTTTCTCATGGTTTTTTTA+AGG | - | chr8_1:421957-421976 | Msa1171000:intron | 25.0% |
| !!! | TCATGGTTTTTTTAAGGTAA+CGG | - | chr8_1:421963-421982 | Msa1171000:intron | 25.0% |
| !! | CAAAATAAACCTGTTTCTTA+GGG | + | chr8_1:422032-422051 | None:intergenic | 25.0% |
| !! | TCAAAATAAACCTGTTTCTT+AGG | + | chr8_1:422033-422052 | None:intergenic | 25.0% |
| ! | TGTTGTCTATTAAATTGGTA+TGG | - | chr8_1:422750-422769 | Msa1171000:intron | 25.0% |
| ! | GTTGTCTATTAAATTGGTAT+GGG | - | chr8_1:422751-422770 | Msa1171000:intron | 25.0% |
| !! | GAAAAATGAAAATGGCATTT+TGG | - | chr8_1:423091-423110 | Msa1171000:intron | 25.0% |
| !!! | GAGTTCAATTATTTTAAAGC+TGG | - | chr8_1:423179-423198 | Msa1171000:intron | 25.0% |
| !!! | GTTCAATTATTTTAAAGCTG+GGG | - | chr8_1:423181-423200 | Msa1171000:intron | 25.0% |
| !!! | CTATTTCTATACATGGATTT+TGG | - | chr8_1:423350-423369 | Msa1171000:intron | 25.0% |
| ! | GAAATTAGAGTTGAGAAAAA+AGG | + | chr8_1:423790-423809 | None:intergenic | 25.0% |
| ! | AACTTTATAGTTCCACATTT+GGG | + | chr8_1:423890-423909 | None:intergenic | 25.0% |
| ! | AAACTTTATAGTTCCACATT+TGG | + | chr8_1:423891-423910 | None:intergenic | 25.0% |
| !!! | TTTTTGAAAACAACACAATG+TGG | + | chr8_1:423980-423999 | None:intergenic | 25.0% |
| ! | TTTATATCCTTTCCTGATAT+GGG | + | chr8_1:424375-424394 | None:intergenic | 25.0% |
| ! | ATTGCGTAACTAAAAAAGAA+CGG | - | chr8_1:424590-424609 | Msa1171000:five_prime_UTR | 25.0% |
| ! | AATTTTCAATGGCGTATAGA+AGG | - | chr8_1:417721-417740 | Msa1171000:three_prime_UTR | 30.0% |
| ACGGTGTAATAATTGGATTA+GGG | + | chr8_1:417806-417825 | None:intergenic | 30.0% | |
| TAAAGCTATTAGAGCTTCTT+CGG | - | chr8_1:417881-417900 | Msa1171000:CDS | 30.0% | |
| GATGGAAGAAAATTAGTTAG+AGG | - | chr8_1:418178-418197 | Msa1171000:CDS | 30.0% | |
| AGTTGAAGAGATAGAGAAAT+TGG | - | chr8_1:418225-418244 | Msa1171000:intron | 30.0% | |
| ! | TATGCAGTGCATTTGTTAAA+GGG | + | chr8_1:418682-418701 | None:intergenic | 30.0% |
| GCATATACAATGGGTATATA+TGG | - | chr8_1:418811-418830 | Msa1171000:intron | 30.0% | |
| ATGTATAGATGCCTTAAAAG+AGG | - | chr8_1:418961-418980 | Msa1171000:intron | 30.0% | |
| TGTATAGATGCCTTAAAAGA+GGG | - | chr8_1:418962-418981 | Msa1171000:intron | 30.0% | |
| TTCTTGTTGCATGAATTCTT+TGG | - | chr8_1:419217-419236 | Msa1171000:intron | 30.0% | |
| ! | CATTACAACAAATTTGGAAC+TGG | + | chr8_1:419354-419373 | None:intergenic | 30.0% |
| GAAAGCAAAATCAATCATTG+AGG | - | chr8_1:419685-419704 | Msa1171000:intron | 30.0% | |
| TATAAAAGGAAGGTAAGGAA+AGG | - | chr8_1:420109-420128 | Msa1171000:CDS | 30.0% | |
| GATATTAGCAGAACATCAAA+TGG | - | chr8_1:420227-420246 | Msa1171000:intron | 30.0% | |
| TATTAGCAGAACATCAAATG+GGG | - | chr8_1:420229-420248 | Msa1171000:intron | 30.0% | |
| ACATCTTCTCTTACTCATAT+CGG | - | chr8_1:420446-420465 | Msa1171000:intron | 30.0% | |
| ! | CTTTTTCCTGATATGTTTAC+GGG | + | chr8_1:420749-420768 | None:intergenic | 30.0% |
| !! | GCTTTTTCCTGATATGTTTA+CGG | + | chr8_1:420750-420769 | None:intergenic | 30.0% |
| !!! | CTGTGTATCACTTTTTAATG+TGG | - | chr8_1:420907-420926 | Msa1171000:intron | 30.0% |
| CATGAATCATTCCTATATTG+AGG | + | chr8_1:421209-421228 | None:intergenic | 30.0% | |
| CTCAATATAGGAATGATTCA+TGG | - | chr8_1:421207-421226 | Msa1171000:intron | 30.0% | |
| !!! | TTCAAGAGGTACTTATGTTT+TGG | + | chr8_1:421320-421339 | None:intergenic | 30.0% |
| GAGTAGTAAATAATTGTGCT+GGG | + | chr8_1:421523-421542 | None:intergenic | 30.0% | |
| AGAGTAGTAAATAATTGTGC+TGG | + | chr8_1:421524-421543 | None:intergenic | 30.0% | |
| ! | CTCTAATTTTCTGATGACAA+AGG | - | chr8_1:421540-421559 | Msa1171000:CDS | 30.0% |
| AGATTGAACTAGTGATTAGA+AGG | + | chr8_1:421693-421712 | None:intergenic | 30.0% | |
| GAGTGATGGTACTAATAATT+TGG | - | chr8_1:421833-421852 | Msa1171000:CDS | 30.0% | |
| !!! | TCACTCTCACTCTTTTTTTA+CGG | - | chr8_1:421879-421898 | Msa1171000:CDS | 30.0% |
| ! | TCATTTTCTTGTCTTTCTCA+TGG | - | chr8_1:421946-421965 | Msa1171000:intron | 30.0% |
| ATACCAAATCATCATCATCT+TGG | + | chr8_1:422272-422291 | None:intergenic | 30.0% | |
| AGAGAAGTCAACAAACAAAA+AGG | + | chr8_1:422299-422318 | None:intergenic | 30.0% | |
| CGATAGTTGTTTATATCACA+GGG | + | chr8_1:422413-422432 | None:intergenic | 30.0% | |
| AGTACAAAATATTGGGAGTT+TGG | + | chr8_1:422530-422549 | None:intergenic | 30.0% | |
| CTTCACGAGTACAAAATATT+GGG | + | chr8_1:422537-422556 | None:intergenic | 30.0% | |
| ! | GTCACAGTTTAAAGTATTCT+TGG | - | chr8_1:422716-422735 | Msa1171000:intron | 30.0% |
| TCTTACTACTCAAAGAGAAT+AGG | + | chr8_1:422845-422864 | None:intergenic | 30.0% | |
| AAAACCAAATGTCAAAGAGT+TGG | - | chr8_1:422877-422896 | Msa1171000:intron | 30.0% | |
| ! | TTTGGTAGTTAGTGAAAACA+AGG | - | chr8_1:423109-423128 | Msa1171000:intron | 30.0% |
| ! | ATATTTAAGGCCTATTTGGT+TGG | + | chr8_1:423156-423175 | None:intergenic | 30.0% |
| ! | CTGAATATTTAAGGCCTATT+TGG | + | chr8_1:423160-423179 | None:intergenic | 30.0% |
| AAGTCCAATAGAAATGATGT+TGG | - | chr8_1:423311-423330 | Msa1171000:intron | 30.0% | |
| !! | GGTCAAACTATTTCTATACA+TGG | - | chr8_1:423343-423362 | Msa1171000:intron | 30.0% |
| CTTATACAGAGCTAATACAA+AGG | + | chr8_1:423472-423491 | None:intergenic | 30.0% | |
| TCCAAAAGACTAGATGTATT+TGG | - | chr8_1:423724-423743 | Msa1171000:intron | 30.0% | |
| !! | TCCAAATACATCTAGTCTTT+TGG | + | chr8_1:423728-423747 | None:intergenic | 30.0% |
| AATAGAGGTTAACATAGGAA+GGG | + | chr8_1:423753-423772 | None:intergenic | 30.0% | |
| CAAACAATAGAGGTTAACAT+AGG | + | chr8_1:423758-423777 | None:intergenic | 30.0% | |
| !! | GTCAATTGATTTGGTTATTC+AGG | - | chr8_1:423948-423967 | Msa1171000:intron | 30.0% |
| CTTTATATCCTTTCCTGATA+TGG | + | chr8_1:424376-424395 | None:intergenic | 30.0% | |
| AAAGGATATAAAGAGTTCTG+AGG | - | chr8_1:424383-424402 | Msa1171000:CDS | 30.0% | |
| ! | TTGCTCGTTTTATATATCGT+GGG | - | chr8_1:424535-424554 | Msa1171000:CDS | 30.0% |
| AATTCTGGATCCAATCGAAA+CGG | + | chr8_1:417690-417709 | None:intergenic | 35.0% | |
| GACGGTGTAATAATTGGATT+AGG | + | chr8_1:417807-417826 | None:intergenic | 35.0% | |
| GAAGAAGACGGTGTAATAAT+TGG | + | chr8_1:417813-417832 | None:intergenic | 35.0% | |
| AAAAAAACAGAGAGAGACCT+TGG | + | chr8_1:417997-418016 | None:intergenic | 35.0% | |
| !! | TCAAAGGTACTCAATTGCAA+GGG | - | chr8_1:418291-418310 | Msa1171000:intron | 35.0% |
| TGAGCTAAGAGAAAAAGAGT+TGG | - | chr8_1:418335-418354 | Msa1171000:intron | 35.0% | |
| AACATAAAATGTTGGCACCT+GGG | + | chr8_1:418518-418537 | None:intergenic | 35.0% | |
| AAACATAAAATGTTGGCACC+TGG | + | chr8_1:418519-418538 | None:intergenic | 35.0% | |
| ! | AGGTGCCAACATTTTATGTT+TGG | - | chr8_1:418518-418537 | Msa1171000:intron | 35.0% |
| ! | GGTGCCAACATTTTATGTTT+GGG | - | chr8_1:418519-418538 | Msa1171000:intron | 35.0% |
| TCAAAGACTACCTAATATGG+GGG | + | chr8_1:418593-418612 | None:intergenic | 35.0% | |
| CTCAAAGACTACCTAATATG+GGG | + | chr8_1:418594-418613 | None:intergenic | 35.0% | |
| GCTCAAAGACTACCTAATAT+GGG | + | chr8_1:418595-418614 | None:intergenic | 35.0% | |
| !!! | TTTTTTGGAAACTCGGTATC+TGG | + | chr8_1:418617-418636 | None:intergenic | 35.0% |
| ! | GTATGCAGTGCATTTGTTAA+AGG | + | chr8_1:418683-418702 | None:intergenic | 35.0% |
| TTAACAAATGCACTGCATAC+TGG | - | chr8_1:418683-418702 | Msa1171000:intron | 35.0% | |
| GGCAACAATATGCCAATAAA+AGG | + | chr8_1:418722-418741 | None:intergenic | 35.0% | |
| TCAAATCGGCATCAACTTTA+AGG | - | chr8_1:418839-418858 | Msa1171000:intron | 35.0% | |
| TTAGCGAAAACCTATGAGTT+TGG | - | chr8_1:418865-418884 | Msa1171000:intron | 35.0% | |
| ACTTCAACACTGTAACTTCT+AGG | + | chr8_1:418997-419016 | None:intergenic | 35.0% | |
| ! | ATGAAGGTCTTCTAAGGATT+TGG | + | chr8_1:419112-419131 | None:intergenic | 35.0% |
| ACATTGCTTTGCTCATATGA+AGG | + | chr8_1:419128-419147 | None:intergenic | 35.0% | |
| ! | ATTTGGAACTGGAGTTGTAT+GGG | + | chr8_1:419343-419362 | None:intergenic | 35.0% |
| ! | AATTTGGAACTGGAGTTGTA+TGG | + | chr8_1:419344-419363 | None:intergenic | 35.0% |
| AGTGCGGTGTTTGTAAATAT+AGG | - | chr8_1:419586-419605 | Msa1171000:intron | 35.0% | |
| ATCAATGAATCCTATCTCTG+AGG | + | chr8_1:419815-419834 | None:intergenic | 35.0% | |
| ATTAGCAGAACATCAAATGG+GGG | - | chr8_1:420230-420249 | Msa1171000:intron | 35.0% | |
| ! | CCTCTAAGTGATTCGAATTT+TGG | + | chr8_1:420373-420392 | None:intergenic | 35.0% |
| CCAAAATTCGAATCACTTAG+AGG | - | chr8_1:420370-420389 | Msa1171000:intron | 35.0% | |
| AAATTCGAATCACTTAGAGG+AGG | - | chr8_1:420373-420392 | Msa1171000:intron | 35.0% | |
| AATTCGAATCACTTAGAGGA+GGG | - | chr8_1:420374-420393 | Msa1171000:intron | 35.0% | |
| GACAGTCCGACAATTATTAA+GGG | - | chr8_1:420410-420429 | Msa1171000:intron | 35.0% | |
| TTATGGGAATGTGTTACAGT+AGG | - | chr8_1:420558-420577 | Msa1171000:intron | 35.0% | |
| AAGCATATCCTTATGGAAGA+GGG | + | chr8_1:420640-420659 | None:intergenic | 35.0% | |
| AAAGCATATCCTTATGGAAG+AGG | + | chr8_1:420641-420660 | None:intergenic | 35.0% | |
| GATCACAAAGCATATCCTTA+TGG | + | chr8_1:420647-420666 | None:intergenic | 35.0% | |
| TAGGACTTCAGATATCATTC+AGG | - | chr8_1:420720-420739 | Msa1171000:intron | 35.0% | |
| AAACATATCAGGAAAAAGCC+TGG | - | chr8_1:420751-420770 | Msa1171000:intron | 35.0% | |
| AACATATCAGGAAAAAGCCT+GGG | - | chr8_1:420752-420771 | Msa1171000:intron | 35.0% | |
| TGAGTGTGTTTGTCTATCAA+AGG | - | chr8_1:421183-421202 | Msa1171000:intron | 35.0% | |
| TCTATCAAAGGCCTCAATAT+AGG | - | chr8_1:421195-421214 | Msa1171000:intron | 35.0% | |
| GATCTGTGTTTGTTTGTACA+CGG | - | chr8_1:421355-421374 | Msa1171000:intron | 35.0% | |
| TGTTTGTTTGTACACGGATA+TGG | - | chr8_1:421361-421380 | Msa1171000:intron | 35.0% | |
| !! | AGAGGAAAGAAGCATCATTT+AGG | + | chr8_1:421629-421648 | None:intergenic | 35.0% |
| TTAGAAGGTCAATAGATAGC+TGG | + | chr8_1:421678-421697 | None:intergenic | 35.0% | |
| GTAAAAAAAGAGTGAGAGTG+AGG | + | chr8_1:421880-421899 | None:intergenic | 35.0% | |
| !!! | TTGAAGCATTTTTTGCCATC+TGG | - | chr8_1:422088-422107 | Msa1171000:intron | 35.0% |
| ! | TAGCCAAGATGATGATGATT+TGG | - | chr8_1:422266-422285 | Msa1171000:intron | 35.0% |
| TCTATCTCACGAAAAGACAA+GGG | + | chr8_1:422340-422359 | None:intergenic | 35.0% | |
| TTCTATCTCACGAAAAGACA+AGG | + | chr8_1:422341-422360 | None:intergenic | 35.0% | |
| TTTCGTGAGATAGAAGTTGA+TGG | - | chr8_1:422346-422365 | Msa1171000:intron | 35.0% | |
| GCGATAGTTGTTTATATCAC+AGG | + | chr8_1:422414-422433 | None:intergenic | 35.0% | |
| CCTTCACGAGTACAAAATAT+TGG | + | chr8_1:422538-422557 | None:intergenic | 35.0% | |
| ! | CCAATATTTTGTACTCGTGA+AGG | - | chr8_1:422535-422554 | Msa1171000:CDS | 35.0% |
| GCTTATATTTAAGCCCCATA+TGG | - | chr8_1:422565-422584 | Msa1171000:CDS | 35.0% | |
| TATATTTAAGCCCCATATGG+TGG | - | chr8_1:422568-422587 | Msa1171000:CDS | 35.0% | |
| ATATTTAAGCCCCATATGGT+GGG | - | chr8_1:422569-422588 | Msa1171000:CDS | 35.0% | |
| GTCTATTAAATTGGTATGGG+TGG | - | chr8_1:422754-422773 | Msa1171000:intron | 35.0% | |
| CAAATGTCAAAGAGTTGGAT+GGG | - | chr8_1:422882-422901 | Msa1171000:intron | 35.0% | |
| AAATGTCAAAGAGTTGGATG+GGG | - | chr8_1:422883-422902 | Msa1171000:intron | 35.0% | |
| AATGTGTTGTCAAACCAAAG+AGG | + | chr8_1:422923-422942 | None:intergenic | 35.0% | |
| GGTTTGACTATACCCTAAAT+TGG | - | chr8_1:423202-423221 | Msa1171000:intron | 35.0% | |
| GAAACAGAGAAGCCAATTTA+GGG | + | chr8_1:423217-423236 | None:intergenic | 35.0% | |
| TGAAACAGAGAAGCCAATTT+AGG | + | chr8_1:423218-423237 | None:intergenic | 35.0% | |
| ATGGCCAACATCATTTCTAT+TGG | + | chr8_1:423318-423337 | None:intergenic | 35.0% | |
| GAAATAGTTTGACCATCTCA+TGG | + | chr8_1:423337-423356 | None:intergenic | 35.0% | |
| TCACAAACTTCAGAGAATCA+TGG | + | chr8_1:423434-423453 | None:intergenic | 35.0% | |
| CAATAGAGGTTAACATAGGA+AGG | + | chr8_1:423754-423773 | None:intergenic | 35.0% | |
| GGAGTAAGTACAAACAATAG+AGG | + | chr8_1:423768-423787 | None:intergenic | 35.0% | |
| TCTTTACGAGTGTCTTCAAA+GGG | + | chr8_1:423853-423872 | None:intergenic | 35.0% | |
| TTCTTTACGAGTGTCTTCAA+AGG | + | chr8_1:423854-423873 | None:intergenic | 35.0% | |
| AACACCGAATTATAAACCAG+AGG | + | chr8_1:423926-423945 | None:intergenic | 35.0% | |
| ! | CGGTGTTAAGTCAATTGATT+TGG | - | chr8_1:423939-423958 | Msa1171000:intron | 35.0% |
| TTAGGTGAAATGAGTAGTGT+TGG | + | chr8_1:424019-424038 | None:intergenic | 35.0% | |
| ATATCATCAACTTACGATGC+AGG | - | chr8_1:424176-424195 | Msa1171000:intron | 35.0% | |
| ATGGGATCAGAATTAACAAG+AGG | - | chr8_1:424339-424358 | Msa1171000:CDS | 35.0% | |
| ! | GTTGCTCGTTTTATATATCG+TGG | - | chr8_1:424534-424553 | Msa1171000:CDS | 35.0% |
| TGCATTTAGTGCTTGTCAAA+CGG | - | chr8_1:424716-424735 | Msa1171000:five_prime_UTR | 35.0% | |
| !! | TATTCACACCGGTTCATGAT+CGG | - | chr8_1:417578-417597 | Msa1171000:three_prime_UTR | 40.0% |
| GATTCTTCCAGAATCTTCGT+CGG | + | chr8_1:417636-417655 | None:intergenic | 40.0% | |
| GATCCAATCGAAACGGTTAT+CGG | + | chr8_1:417683-417702 | None:intergenic | 40.0% | |
| AATTCAACCTCCTCGAATTC+TGG | + | chr8_1:417705-417724 | None:intergenic | 40.0% | |
| ! | CGAGGAGGTTGAATTTTCAA+TGG | - | chr8_1:417710-417729 | Msa1171000:three_prime_UTR | 40.0% |
| GCGTATAGAAGGAGACAATA+CGG | - | chr8_1:417732-417751 | Msa1171000:three_prime_UTR | 40.0% | |
| CCATCATTACTCGAAGAAGA+CGG | + | chr8_1:417825-417844 | None:intergenic | 40.0% | |
| CGTTGACACTTCTTCAACTT+CGG | - | chr8_1:417845-417864 | Msa1171000:CDS | 40.0% | |
| TTTGACACACAGAGAAACAG+GGG | + | chr8_1:418276-418295 | None:intergenic | 40.0% | |
| CTTTGACACACAGAGAAACA+GGG | + | chr8_1:418277-418296 | None:intergenic | 40.0% | |
| !! | GTCAAAGGTACTCAATTGCA+AGG | - | chr8_1:418290-418309 | Msa1171000:intron | 40.0% |
| !! | CAAAGGTACTCAATTGCAAG+GGG | - | chr8_1:418292-418311 | Msa1171000:intron | 40.0% |
| !! | AAAGGTACTCAATTGCAAGG+GGG | - | chr8_1:418293-418312 | Msa1171000:intron | 40.0% |
| GCTAAGAGAAAAAGAGTTGG+AGG | - | chr8_1:418338-418357 | Msa1171000:intron | 40.0% | |
| AGAAAAAGAGTTGGAGGTTC+TGG | - | chr8_1:418344-418363 | Msa1171000:intron | 40.0% | |
| GAAAAAGAGTTGGAGGTTCT+GGG | - | chr8_1:418345-418364 | Msa1171000:intron | 40.0% | |
| GTTTCATGTTCAATTACCCC+AGG | - | chr8_1:418498-418517 | Msa1171000:intron | 40.0% | |
| ACATAAAATGTTGGCACCTG+GGG | + | chr8_1:418517-418536 | None:intergenic | 40.0% | |
| CTGGCCCAAACATAAAATGT+TGG | + | chr8_1:418526-418545 | None:intergenic | 40.0% | |
| AACCAAAGGTTTGTAGAGAC+TGG | + | chr8_1:418545-418564 | None:intergenic | 40.0% | |
| GTCTCTACAAACCTTTGGTT+TGG | - | chr8_1:418545-418564 | Msa1171000:intron | 40.0% | |
| AAAGACTACCTAATATGGGG+GGG | + | chr8_1:418591-418610 | None:intergenic | 40.0% | |
| CAAAGACTACCTAATATGGG+GGG | + | chr8_1:418592-418611 | None:intergenic | 40.0% | |
| GGCTCAAAGACTACCTAATA+TGG | + | chr8_1:418596-418615 | None:intergenic | 40.0% | |
| ! | ATGCACTGCATACTGGTTAA+AGG | - | chr8_1:418690-418709 | Msa1171000:intron | 40.0% |
| CCCATTGTATATGCTACACA+GGG | + | chr8_1:418805-418824 | None:intergenic | 40.0% | |
| CCCTGTGTAGCATATACAAT+GGG | - | chr8_1:418802-418821 | Msa1171000:intron | 40.0% | |
| ACCCATTGTATATGCTACAC+AGG | + | chr8_1:418806-418825 | None:intergenic | 40.0% | |
| AGAAGCTAGTCCAAACTCAT+AGG | + | chr8_1:418878-418897 | None:intergenic | 40.0% | |
| !! | TTGGACTAGCTTCTAGTTGA+TGG | - | chr8_1:418884-418903 | Msa1171000:intron | 40.0% |
| !! | TGGACTAGCTTCTAGTTGAT+GGG | - | chr8_1:418885-418904 | Msa1171000:intron | 40.0% |
| CTAAGGATTTGGAGGCAATA+GGG | + | chr8_1:419101-419120 | None:intergenic | 40.0% | |
| TCTAAGGATTTGGAGGCAAT+AGG | + | chr8_1:419102-419121 | None:intergenic | 40.0% | |
| ! | AAGGTCTTCTAAGGATTTGG+AGG | + | chr8_1:419109-419128 | None:intergenic | 40.0% |
| GCTCATATGAAGGTCTTCTA+AGG | + | chr8_1:419118-419137 | None:intergenic | 40.0% | |
| ! | TGTCTGTGACTATTTCTCTG+AGG | - | chr8_1:419171-419190 | Msa1171000:intron | 40.0% |
| ACAACCTAAAGCTATTGCTG+AGG | - | chr8_1:419424-419443 | Msa1171000:intron | 40.0% | |
| GAAGATTCGAAATGCATGTG+TGG | - | chr8_1:419462-419481 | Msa1171000:intron | 40.0% | |
| AAATTGAATGAGCCCAAGAG+TGG | - | chr8_1:419641-419660 | Msa1171000:intron | 40.0% | |
| ! | ACACCAGAATCTGAAATACC+TGG | - | chr8_1:419719-419738 | Msa1171000:intron | 40.0% |
| ! | CACCAGAATCTGAAATACCT+GGG | - | chr8_1:419720-419739 | Msa1171000:intron | 40.0% |
| ACAACAAGGTCACAATATCC+TGG | - | chr8_1:419743-419762 | Msa1171000:intron | 40.0% | |
| AATATCCTGGCGTAACATCA+AGG | - | chr8_1:419756-419775 | Msa1171000:intron | 40.0% | |
| ATATCCTGGCGTAACATCAA+GGG | - | chr8_1:419757-419776 | Msa1171000:intron | 40.0% | |
| ! | TTGGTAACATAATGTGGTCG+TGG | - | chr8_1:419866-419885 | Msa1171000:intron | 40.0% |
| TGGTAACATAATGTGGTCGT+GGG | - | chr8_1:419867-419886 | Msa1171000:intron | 40.0% | |
| TTAGCAGAACATCAAATGGG+GGG | - | chr8_1:420231-420250 | Msa1171000:intron | 40.0% | |
| GACACTAGCATCCAATTTCA+TGG | + | chr8_1:420335-420354 | None:intergenic | 40.0% | |
| GGACAGTCCGACAATTATTA+AGG | - | chr8_1:420409-420428 | Msa1171000:intron | 40.0% | |
| TCTTCTCTTACTCATATCGG+TGG | - | chr8_1:420449-420468 | Msa1171000:intron | 40.0% | |
| TGGCACCATTGGTAAATCTT+TGG | - | chr8_1:420469-420488 | Msa1171000:intron | 40.0% | |
| CACCATTGGTAAATCTTTGG+AGG | - | chr8_1:420472-420491 | Msa1171000:intron | 40.0% | |
| CACCTCCAAAGATTTACCAA+TGG | + | chr8_1:420477-420496 | None:intergenic | 40.0% | |
| ACTTATGCAATAGACAGGGA+TGG | - | chr8_1:420533-420552 | Msa1171000:intron | 40.0% | |
| CTTATGCAATAGACAGGGAT+GGG | - | chr8_1:420534-420553 | Msa1171000:intron | 40.0% | |
| AATAGACAGGGATGGGATTA+TGG | - | chr8_1:420541-420560 | Msa1171000:intron | 40.0% | |
| ATAGACAGGGATGGGATTAT+GGG | - | chr8_1:420542-420561 | Msa1171000:intron | 40.0% | |
| TATCCTTATGGAAGAGGGAA+AGG | + | chr8_1:420635-420654 | None:intergenic | 40.0% | |
| AGGAAACCCGTAAACATATC+AGG | - | chr8_1:420740-420759 | Msa1171000:intron | 40.0% | |
| AAAAAGCCTGGGAACTTTGT+AGG | - | chr8_1:420763-420782 | Msa1171000:intron | 40.0% | |
| GTTCTTGCAACGTTGTAGAA+TGG | + | chr8_1:420807-420826 | None:intergenic | 40.0% | |
| AGATCAAGAACTTCAGCTGA+AGG | - | chr8_1:420861-420880 | Msa1171000:intron | 40.0% | |
| ! | ATGTGGTAAAAGTACACGTG+TGG | - | chr8_1:420924-420943 | Msa1171000:intron | 40.0% |
| AGTACACGTGTGGTTAAGTA+CGG | - | chr8_1:420934-420953 | Msa1171000:intron | 40.0% | |
| AGATGGACCTAGGAAAACTA+TGG | + | chr8_1:421783-421802 | None:intergenic | 40.0% | |
| ! | GTTTTCCTAGGTCCATCTTA+CGG | - | chr8_1:421785-421804 | Msa1171000:intron | 40.0% |
| ! | TACCATCACTCTTGTTTCAG+CGG | + | chr8_1:421824-421843 | None:intergenic | 40.0% |
| CCAAAGCAAAACTGCTTCTT+CGG | - | chr8_1:422142-422161 | Msa1171000:intron | 40.0% | |
| CAAAGCAAAACTGCTTCTTC+GGG | - | chr8_1:422143-422162 | Msa1171000:intron | 40.0% | |
| !! | ACCATCGATTACTTTTGCTG+TGG | - | chr8_1:422460-422479 | Msa1171000:intron | 40.0% |
| ACCACAGCAAAAGTAATCGA+TGG | + | chr8_1:422464-422483 | None:intergenic | 40.0% | |
| TATTTAATGCTACCCCTGCA+GGG | - | chr8_1:422612-422631 | Msa1171000:CDS | 40.0% | |
| ! | TGATGTTGCCTGCTTCTTTT+CGG | - | chr8_1:422676-422695 | Msa1171000:CDS | 40.0% |
| TTAAATTGGTATGGGTGGAG+AGG | - | chr8_1:422759-422778 | Msa1171000:intron | 40.0% | |
| TAAATTGGTATGGGTGGAGA+GGG | - | chr8_1:422760-422779 | Msa1171000:intron | 40.0% | |
| CCATCCAACTCTTTGACATT+TGG | + | chr8_1:422884-422903 | None:intergenic | 40.0% | |
| CCAAATGTCAAAGAGTTGGA+TGG | - | chr8_1:422881-422900 | Msa1171000:intron | 40.0% | |
| TTGGATGGGGCTGTAATATA+GGG | - | chr8_1:422896-422915 | Msa1171000:intron | 40.0% | |
| AGCTTCTTCTCCAACCAAAT+AGG | - | chr8_1:423143-423162 | Msa1171000:intron | 40.0% | |
| AAATGATGTTGGCCATGAGA+TGG | - | chr8_1:423322-423341 | Msa1171000:intron | 40.0% | |
| GCATAAAGTGTACTGTGCAA+AGG | - | chr8_1:423385-423404 | Msa1171000:intron | 40.0% | |
| TAAAGTGTACTGTGCAAAGG+TGG | - | chr8_1:423388-423407 | Msa1171000:intron | 40.0% | |
| AAAGTGTACTGTGCAAAGGT+GGG | - | chr8_1:423389-423408 | Msa1171000:intron | 40.0% | |
| CTTTACGAGTGTCTTCAAAG+GGG | + | chr8_1:423852-423871 | None:intergenic | 40.0% | |
| CACATTTGGGTAAAGCTTCT+TGG | + | chr8_1:423877-423896 | None:intergenic | 40.0% | |
| CAAGAAGCTTTACCCAAATG+TGG | - | chr8_1:423875-423894 | Msa1171000:intron | 40.0% | |
| CCGAATTATAAACCAGAGGT+GGG | + | chr8_1:423922-423941 | None:intergenic | 40.0% | |
| ! | CCCACCTCTGGTTTATAATT+CGG | - | chr8_1:423919-423938 | Msa1171000:intron | 40.0% |
| ACCGAATTATAAACCAGAGG+TGG | + | chr8_1:423923-423942 | None:intergenic | 40.0% | |
| AGTTGCAGTCGTATCTGTAA+GGG | + | chr8_1:424069-424088 | None:intergenic | 40.0% | |
| AAGTTGCAGTCGTATCTGTA+AGG | + | chr8_1:424070-424089 | None:intergenic | 40.0% | |
| ! | TTAGAATCGAGGGGCATAAT+AGG | + | chr8_1:424270-424289 | None:intergenic | 40.0% |
| ! | AGACGGAGTATTAGAATCGA+GGG | + | chr8_1:424280-424299 | None:intergenic | 40.0% |
| TGAAGACATTGATAGGGATG+TGG | + | chr8_1:424304-424323 | None:intergenic | 40.0% | |
| GGCATCTGAAGACATTGATA+GGG | + | chr8_1:424310-424329 | None:intergenic | 40.0% | |
| TGGCATCTGAAGACATTGAT+AGG | + | chr8_1:424311-424330 | None:intergenic | 40.0% | |
| ATGTCTTCAGATGCCAATCT+TGG | - | chr8_1:424315-424334 | Msa1171000:CDS | 40.0% | |
| TTCATCTCCCATATCAGGAA+AGG | - | chr8_1:424365-424384 | Msa1171000:CDS | 40.0% | |
| !! | GAGTTCTGAGGTGATTGTAA+AGG | - | chr8_1:424395-424414 | Msa1171000:CDS | 40.0% |
| !! | AAGAGCATCTCTTCTATAGC+TGG | - | chr8_1:424438-424457 | Msa1171000:CDS | 40.0% |
| CATCTCTTCTATAGCTGGAA+AGG | - | chr8_1:424443-424462 | Msa1171000:CDS | 40.0% | |
| TCTTCTATAGCTGGAAAGGA+CGG | - | chr8_1:424447-424466 | Msa1171000:CDS | 40.0% | |
| ! | TTTGGGATCCGATCATGAAC+CGG | + | chr8_1:417589-417608 | None:intergenic | 45.0% |
| TCGATTGGATCCAGAATTCG+AGG | - | chr8_1:417692-417711 | Msa1171000:three_prime_UTR | 45.0% | |
| ATTGGATCCAGAATTCGAGG+AGG | - | chr8_1:417695-417714 | Msa1171000:three_prime_UTR | 45.0% | |
| CCGTCTTCTTCGAGTAATGA+TGG | - | chr8_1:417822-417841 | Msa1171000:exon | 45.0% | |
| ! | TCTTCGCTTTCGTCGCTTTA+TGG | - | chr8_1:417915-417934 | Msa1171000:CDS | 45.0% |
| ACTCTAATCTCTCTTCTCCG+CGG | - | chr8_1:417940-417959 | Msa1171000:CDS | 45.0% | |
| AAAACAGAGAGAGACCTTGG+AGG | + | chr8_1:417994-418013 | None:intergenic | 45.0% | |
| CCTTTGACACACAGAGAAAC+AGG | + | chr8_1:418278-418297 | None:intergenic | 45.0% | |
| ! | CCTGTTTCTCTGTGTGTCAA+AGG | - | chr8_1:418275-418294 | Msa1171000:intron | 45.0% |
| TACTCAATTGCAAGGGGGTT+GGG | - | chr8_1:418298-418317 | Msa1171000:intron | 45.0% | |
| CTGGGTTCAAACTCGTTTGA+AGG | - | chr8_1:418363-418382 | Msa1171000:intron | 45.0% | |
| CAAAATCTTTAGCGCGAAGC+TGG | - | chr8_1:418442-418461 | Msa1171000:intron | 45.0% | |
| TAGCGCGAAGCTGGAAAAAA+TGG | - | chr8_1:418451-418470 | Msa1171000:intron | 45.0% | |
| ! | CAAGCGAAAAGCACACTCAT+AGG | + | chr8_1:418478-418497 | None:intergenic | 45.0% |
| ! | CTATGAGTGTGCTTTTCGCT+TGG | - | chr8_1:418476-418495 | Msa1171000:intron | 45.0% |
| GGCAATTGAAGCCAAACCAA+AGG | + | chr8_1:418559-418578 | None:intergenic | 45.0% | |
| AAGACTACCTAATATGGGGG+GGG | + | chr8_1:418590-418609 | None:intergenic | 45.0% | |
| ACAAACCTTGCAAAGCCAGA+GGG | + | chr8_1:418778-418797 | None:intergenic | 45.0% | |
| GCCCTGTGTAGCATATACAA+TGG | - | chr8_1:418801-418820 | Msa1171000:intron | 45.0% | |
| GTGACCTCAGCAATAGCTTT+AGG | + | chr8_1:419431-419450 | None:intergenic | 45.0% | |
| !! | ATGAGCCCAAGAGTGGATTT+TGG | - | chr8_1:419648-419667 | Msa1171000:intron | 45.0% |
| !! | TGAGCCCAAGAGTGGATTTT+GGG | - | chr8_1:419649-419668 | Msa1171000:intron | 45.0% |
| GTCCCAGGTATTTCAGATTC+TGG | + | chr8_1:419725-419744 | None:intergenic | 45.0% | |
| CTGAAATACCTGGGACAACA+AGG | - | chr8_1:419729-419748 | Msa1171000:intron | 45.0% | |
| ! | TATTGTGACCTTGTTGTCCC+AGG | + | chr8_1:419740-419759 | None:intergenic | 45.0% |
| TATCCTGGCGTAACATCAAG+GGG | - | chr8_1:419758-419777 | Msa1171000:intron | 45.0% | |
| TCTCTCAAGTCCTCAGAGAT+AGG | - | chr8_1:419802-419821 | Msa1171000:intron | 45.0% | |
| TAGAGGAGGGCAATCTCAAA+AGG | - | chr8_1:420387-420406 | Msa1171000:intron | 45.0% | |
| AGAGGAGGGCAATCTCAAAA+GGG | - | chr8_1:420388-420407 | Msa1171000:intron | 45.0% | |
| TCTCCTTTCCCTCTTCCATA+AGG | - | chr8_1:420629-420648 | Msa1171000:intron | 45.0% | |
| CCTGCAAACACGAATTGCAT+GGG | + | chr8_1:420678-420697 | None:intergenic | 45.0% | |
| TCCTGCAAACACGAATTGCA+TGG | + | chr8_1:420679-420698 | None:intergenic | 45.0% | |
| TGCAATTCGTGTTTGCAGGA+AGG | - | chr8_1:420679-420698 | Msa1171000:intron | 45.0% | |
| GAACTTTGTAGGACAGAGTC+AGG | - | chr8_1:420774-420793 | Msa1171000:intron | 45.0% | |
| AGTTCTTGATCTCCTTGCGT+TGG | + | chr8_1:420853-420872 | None:intergenic | 45.0% | |
| CAGACTTCATGTCCGTAAGA+TGG | + | chr8_1:421800-421819 | None:intergenic | 45.0% | |
| AAAAAGAGTGAGAGTGAGGC+TGG | + | chr8_1:421876-421895 | None:intergenic | 45.0% | |
| TTTCTTAGGGTAGAGAGGGA+AGG | + | chr8_1:422019-422038 | None:intergenic | 45.0% | |
| ! | CCTGTTTCTTAGGGTAGAGA+GGG | + | chr8_1:422023-422042 | None:intergenic | 45.0% |
| ! | ACCTGTTTCTTAGGGTAGAG+AGG | + | chr8_1:422024-422043 | None:intergenic | 45.0% |
| AACCTGCAACGAAATCCAGA+TGG | + | chr8_1:422106-422125 | None:intergenic | 45.0% | |
| GATTTCGTTGCAGGTTGCAA+TGG | - | chr8_1:422110-422129 | Msa1171000:intron | 45.0% | |
| ! | CCGAAGAAGCAGTTTTGCTT+TGG | + | chr8_1:422145-422164 | None:intergenic | 45.0% |
| ACACAAGACTCCCACCATAT+GGG | + | chr8_1:422582-422601 | None:intergenic | 45.0% | |
| TACACAAGACTCCCACCATA+TGG | + | chr8_1:422583-422602 | None:intergenic | 45.0% | |
| ! | ATGGTGGGAGTCTTGTGTAT+TGG | - | chr8_1:422584-422603 | Msa1171000:CDS | 45.0% |
| GTATTTAATGCTACCCCTGC+AGG | - | chr8_1:422611-422630 | Msa1171000:CDS | 45.0% | |
| ATTTAATGCTACCCCTGCAG+GGG | - | chr8_1:422613-422632 | Msa1171000:CDS | 45.0% | |
| TGAGACAACCGAAAAGAAGC+AGG | + | chr8_1:422687-422706 | None:intergenic | 45.0% | |
| GTTGGATGGGGCTGTAATAT+AGG | - | chr8_1:422895-422914 | Msa1171000:intron | 45.0% | |
| TGGATGGGGCTGTAATATAG+GGG | - | chr8_1:422897-422916 | Msa1171000:intron | 45.0% | |
| CTGTAATATAGGGGCCTCTT+TGG | - | chr8_1:422906-422925 | Msa1171000:intron | 45.0% | |
| ! | GTTTGAGTTTATCCCACCTC+TGG | - | chr8_1:423907-423926 | Msa1171000:intron | 45.0% |
| TCGTGAGAATCGCTTTCTGA+GGG | - | chr8_1:424143-424162 | Msa1171000:intron | 45.0% | |
| GTACTTAGACGAGAGCAATG+AGG | - | chr8_1:424206-424225 | Msa1171000:intron | 45.0% | |
| ! | GACGGAGTATTAGAATCGAG+GGG | + | chr8_1:424279-424298 | None:intergenic | 45.0% |
| ! | CAGACGGAGTATTAGAATCG+AGG | + | chr8_1:424281-424300 | None:intergenic | 45.0% |
| ATTGATAGGGATGTGGCAGA+CGG | + | chr8_1:424297-424316 | None:intergenic | 45.0% | |
| TTCAGATGCCAATCTTGGCA+TGG | - | chr8_1:424320-424339 | Msa1171000:CDS | 45.0% | |
| TCAGATGCCAATCTTGGCAT+GGG | - | chr8_1:424321-424340 | Msa1171000:CDS | 45.0% | |
| TTCTGATCCCATGCCAAGAT+TGG | + | chr8_1:424331-424350 | None:intergenic | 45.0% | |
| GGCATTTCATCTCCCATATC+AGG | - | chr8_1:424360-424379 | Msa1171000:CDS | 45.0% | |
| ACTGACGCTTCAGTGTATCA+TGG | + | chr8_1:424673-424692 | None:intergenic | 45.0% | |
| !!! | TATTTTTTAATAGAAATAAA+AGG | - | chr8_1:420050-420069 | Msa1171000:CDS | 5.0% |
| TGAAGAACTCTGATGCGACC+GGG | + | chr8_1:417538-417557 | None:intergenic | 50.0% | |
| GTGAAGAACTCTGATGCGAC+CGG | + | chr8_1:417539-417558 | None:intergenic | 50.0% | |
| GGTGAGTGGTGGTTCGATTT+GGG | + | chr8_1:417606-417625 | None:intergenic | 50.0% | |
| TGGTGAGTGGTGGTTCGATT+TGG | + | chr8_1:417607-417626 | None:intergenic | 50.0% | |
| TCCAGAATCTTCGTCGGTGA+CGG | + | chr8_1:417630-417649 | None:intergenic | 50.0% | |
| ! | GTGCCGATAACCGTTTCGAT+TGG | - | chr8_1:417677-417696 | Msa1171000:three_prime_UTR | 50.0% |
| GCTTCGTCTTCGAAAAGCGA+AGG | + | chr8_1:417774-417793 | None:intergenic | 50.0% | |
| GTACTCAATTGCAAGGGGGT+TGG | - | chr8_1:418297-418316 | Msa1171000:intron | 50.0% | |
| GGCCAGTCTCTACAAACCTT+TGG | - | chr8_1:418540-418559 | Msa1171000:intron | 50.0% | |
| AGACTACCTAATATGGGGGG+GGG | + | chr8_1:418589-418608 | None:intergenic | 50.0% | |
| GGTCAAGTGTGAGTAGGCAA+TGG | - | chr8_1:418749-418768 | Msa1171000:intron | 50.0% | |
| CACAAACCTTGCAAAGCCAG+AGG | + | chr8_1:418779-418798 | None:intergenic | 50.0% | |
| !! | GAGCCCAAGAGTGGATTTTG+GGG | - | chr8_1:419650-419669 | Msa1171000:intron | 50.0% |
| ACGCCCCAAAATCCACTCTT+GGG | + | chr8_1:419656-419675 | None:intergenic | 50.0% | |
| AACGCCCCAAAATCCACTCT+TGG | + | chr8_1:419657-419676 | None:intergenic | 50.0% | |
| !!! | GATTTTGGGGCGTTCTAGCT+AGG | - | chr8_1:419663-419682 | Msa1171000:intron | 50.0% |
| TTTCCCCTTGATGTTACGCC+AGG | + | chr8_1:419764-419783 | None:intergenic | 50.0% | |
| TGGCGTAACATCAAGGGGAA+AGG | - | chr8_1:419763-419782 | Msa1171000:intron | 50.0% | |
| ! | GCTAGTGTCATTCTCTGTGC+AGG | - | chr8_1:420346-420365 | Msa1171000:intron | 50.0% |
| ACTCATATCGGTGGCACCAT+TGG | - | chr8_1:420458-420477 | Msa1171000:intron | 50.0% | |
| CCCATGCAATTCGTGTTTGC+AGG | - | chr8_1:420675-420694 | Msa1171000:intron | 50.0% | |
| CTCTGTCCTACAAAGTTCCC+AGG | + | chr8_1:420772-420791 | None:intergenic | 50.0% | |
| !! | TGAGGTTCTAAAGCCTACCC+AGG | - | chr8_1:421756-421775 | Msa1171000:intron | 50.0% |
| !! | GAGGTTCTAAAGCCTACCCA+GGG | - | chr8_1:421757-421776 | Msa1171000:intron | 50.0% |
| CCTAGGAAAACTATGGCCCT+GGG | + | chr8_1:421776-421795 | None:intergenic | 50.0% | |
| ACCTAGGAAAACTATGGCCC+TGG | + | chr8_1:421777-421796 | None:intergenic | 50.0% | |
| CATGTCCGTAAGATGGACCT+AGG | + | chr8_1:421793-421812 | None:intergenic | 50.0% | |
| GACCGCTGAAACAAGAGTGA+TGG | - | chr8_1:421819-421838 | Msa1171000:CDS | 50.0% | |
| CCCTCTCTACCCTAAGAAAC+AGG | - | chr8_1:422020-422039 | Msa1171000:intron | 50.0% | |
| TGCCATCTGGATTTCGTTGC+AGG | - | chr8_1:422101-422120 | Msa1171000:intron | 50.0% | |
| GTTGCAGGTTGCAATGGCAA+TGG | - | chr8_1:422116-422135 | Msa1171000:intron | 50.0% | |
| TCGGGAGTTGAAGACTGTCA+AGG | - | chr8_1:422161-422180 | Msa1171000:intron | 50.0% | |
| GAAGACTGTCAAGGCTGATC+TGG | - | chr8_1:422170-422189 | Msa1171000:intron | 50.0% | |
| GGCTGATCTGGCATTTGCAA+AGG | - | chr8_1:422182-422201 | Msa1171000:intron | 50.0% | |
| GGATCGATGTGCTCAACTAG+AGG | - | chr8_1:422203-422222 | Msa1171000:intron | 50.0% | |
| TCCTCCGTGTAAATCGCGAA+AGG | - | chr8_1:422238-422257 | Msa1171000:intron | 50.0% | |
| CCTCCGTGTAAATCGCGAAA+GGG | - | chr8_1:422239-422258 | Msa1171000:intron | 50.0% | |
| CTCCGTGTAAATCGCGAAAG+GGG | - | chr8_1:422240-422259 | Msa1171000:intron | 50.0% | |
| CTCCCCTTTCGCGATTTACA+CGG | + | chr8_1:422245-422264 | None:intergenic | 50.0% | |
| CACAAGACTCCCACCATATG+GGG | + | chr8_1:422581-422600 | None:intergenic | 50.0% | |
| CAAACTCAAAACCCCTGCAG+GGG | + | chr8_1:422627-422646 | None:intergenic | 50.0% | |
| CCAAACTCAAAACCCCTGCA+GGG | + | chr8_1:422628-422647 | None:intergenic | 50.0% | |
| TACTGTGCAAAGGTGGGCAA+AGG | - | chr8_1:423395-423414 | Msa1171000:intron | 50.0% | |
| ACTGTGCAAAGGTGGGCAAA+GGG | - | chr8_1:423396-423415 | Msa1171000:intron | 50.0% | |
| GTGTCTTCAAAGGGGAAGCA+GGG | + | chr8_1:423844-423863 | None:intergenic | 50.0% | |
| AGTGTCTTCAAAGGGGAAGC+AGG | + | chr8_1:423845-423864 | None:intergenic | 50.0% | |
| TCTAGCTGAGAAAGCTCGCT+TGG | - | chr8_1:424098-424117 | Msa1171000:intron | 50.0% | |
| CTCGTGAGAATCGCTTTCTG+AGG | - | chr8_1:424142-424161 | Msa1171000:intron | 50.0% | |
| ! | TGAGAATCGCTTTCTGAGGG+AGG | - | chr8_1:424146-424165 | Msa1171000:intron | 50.0% |
| ! | AGAATCTTCGTCGGTGACGG+TGG | + | chr8_1:417627-417646 | None:intergenic | 55.0% |
| ACCGTCACCGACGAAGATTC+TGG | - | chr8_1:417626-417645 | Msa1171000:three_prime_UTR | 55.0% | |
| CAAAACCGCGCTGAGCGTTA+CGG | - | chr8_1:417655-417674 | Msa1171000:three_prime_UTR | 55.0% | |
| ! | GTAGGAGTAGGTTGAGACCG+CGG | + | chr8_1:417960-417979 | None:intergenic | 55.0% |
| GATGGAGGAGCAGTAGGAGT+AGG | + | chr8_1:417972-417991 | None:intergenic | 55.0% | |
| TTGGAGGATGGAGGAGCAGT+AGG | + | chr8_1:417978-417997 | None:intergenic | 55.0% | |
| TACTGCTCCTCCATCCTCCA+AGG | - | chr8_1:417977-417996 | Msa1171000:CDS | 55.0% | |
| AGAGAGACCTTGGAGGATGG+AGG | + | chr8_1:417987-418006 | None:intergenic | 55.0% | |
| CAGAGAGAGACCTTGGAGGA+TGG | + | chr8_1:417990-418009 | None:intergenic | 55.0% | |
| GACACACAGAGAAACAGGGG+AGG | + | chr8_1:418273-418292 | None:intergenic | 55.0% | |
| ACTACCTAATATGGGGGGGG+GGG | + | chr8_1:418587-418606 | None:intergenic | 55.0% | |
| GACTACCTAATATGGGGGGG+GGG | + | chr8_1:418588-418607 | None:intergenic | 55.0% | |
| GGCATATTGTTGCCTGCGCA+AGG | - | chr8_1:418728-418747 | Msa1171000:intron | 55.0% | |
| ACTCACACTTGACCTTGCGC+AGG | + | chr8_1:418743-418762 | None:intergenic | 55.0% | |
| GCGCAAGGTCAAGTGTGAGT+AGG | - | chr8_1:418743-418762 | Msa1171000:intron | 55.0% | |
| AGTAGGCAATGGAAGCCCTC+TGG | - | chr8_1:418760-418779 | Msa1171000:intron | 55.0% | |
| CGTTGCAAGAACCCCAGTTG+CGG | - | chr8_1:420815-420834 | Msa1171000:intron | 55.0% | |
| ! | TCCTTGCGTTGGCGACATCT+GGG | + | chr8_1:420842-420861 | None:intergenic | 55.0% |
| !! | TGAAGGCATCTCGCGACGTA+AGG | - | chr8_1:420878-420897 | Msa1171000:intron | 55.0% |
| GGAAAACTATGGCCCTGGGT+AGG | + | chr8_1:421772-421791 | None:intergenic | 55.0% | |
| ! | CCCAGGGCCATAGTTTTCCT+AGG | - | chr8_1:421773-421792 | Msa1171000:intron | 55.0% |
| CCCTTTCGCGATTTACACGG+AGG | + | chr8_1:422242-422261 | None:intergenic | 55.0% | |
| !!! | CCCTGCAGGGGTTTTGAGTT+TGG | - | chr8_1:422625-422644 | Msa1171000:CDS | 55.0% |
| GCCAAACTCAAAACCCCTGC+AGG | + | chr8_1:422629-422648 | None:intergenic | 55.0% | |
| CTGTGCAAAGGTGGGCAAAG+GGG | - | chr8_1:423397-423416 | Msa1171000:intron | 55.0% | |
| ! | GGCACTGGGGGTAAGTTAAG+AGG | + | chr8_1:424249-424268 | None:intergenic | 55.0% |
| !! | AGGGGCATAATAGGCACTGG+GGG | + | chr8_1:424261-424280 | None:intergenic | 55.0% |
| ! | GAGGGGCATAATAGGCACTG+GGG | + | chr8_1:424262-424281 | None:intergenic | 55.0% |
| ! | CGAGGGGCATAATAGGCACT+GGG | + | chr8_1:424263-424282 | None:intergenic | 55.0% |
| ! | TCGAGGGGCATAATAGGCAC+TGG | + | chr8_1:424264-424283 | None:intergenic | 55.0% |
| TACCTAATATGGGGGGGGGG+GGG | + | chr8_1:418585-418604 | None:intergenic | 60.0% | |
| CTACCTAATATGGGGGGGGG+GGG | + | chr8_1:418586-418605 | None:intergenic | 60.0% | |
| !! | GGAAGCCCTCTGGCTTTGCA+AGG | - | chr8_1:418770-418789 | Msa1171000:intron | 60.0% |
| ! | GACATCTGGGACCGCAACTG+GGG | + | chr8_1:420829-420848 | None:intergenic | 60.0% |
| ! | CGACATCTGGGACCGCAACT+GGG | + | chr8_1:420830-420849 | None:intergenic | 60.0% |
| TCCCAGATGTCGCCAACGCA+AGG | - | chr8_1:420838-420857 | Msa1171000:intron | 60.0% | |
| ! | CTCCTTGCGTTGGCGACATC+TGG | + | chr8_1:420843-420862 | None:intergenic | 60.0% |
| AGGCATCTCGCGACGTAAGG+TGG | - | chr8_1:420881-420900 | Msa1171000:intron | 60.0% | |
| AAGGTGGGCAAAGGGGAGCA+TGG | - | chr8_1:423404-423423 | Msa1171000:intron | 60.0% | |
| CAAAGGGGAAGCAGGGAGAG+TGG | + | chr8_1:423837-423856 | None:intergenic | 60.0% | |
| ! | TCGGTGACGGTGGTGAGTGG+TGG | + | chr8_1:417617-417636 | None:intergenic | 65.0% |
| ! | TCGTCGGTGACGGTGGTGAG+TGG | + | chr8_1:417620-417639 | None:intergenic | 65.0% |
| ACCTAATATGGGGGGGGGGG+GGG | + | chr8_1:418584-418603 | None:intergenic | 65.0% | |
| ! | GCGACATCTGGGACCGCAAC+TGG | + | chr8_1:420831-420850 | None:intergenic | 65.0% |
| CGGCACCGTAACGCTCAGCG+CGG | + | chr8_1:417663-417682 | None:intergenic | 70.0% | |
| TAATATGGGGGGGGGGGGGG+GGG | + | chr8_1:418581-418600 | None:intergenic | 70.0% | |
| CTAATATGGGGGGGGGGGGG+GGG | + | chr8_1:418582-418601 | None:intergenic | 70.0% | |
| CCTAATATGGGGGGGGGGGG+GGG | + | chr8_1:418583-418602 | None:intergenic | 70.0% | |
| AATATGGGGGGGGGGGGGGG+GGG | + | chr8_1:418580-418599 | None:intergenic | 75.0% | |
| CCCCCCCCCCCCCCCATATT+AGG | - | chr8_1:418580-418599 | Msa1171000:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 417525 | 424784 | 417525 | ID=Msa1171000;Name=Msa1171000 |
| chr8_1 | mRNA | 417525 | 424784 | 417525 | ID=Msa1171000-mRNA-1;Parent=Msa1171000;Name=Msa1171000-mRNA-1;_AED=0.21;_eAED=0.21;_QI=204|1|1|1|1|1|6|308|445 |
| chr8_1 | exon | 417525 | 418234 | 417525 | ID=Msa1171000-mRNA-1:exon:123;Parent=Msa1171000-mRNA-1 |
| chr8_1 | exon | 420022 | 420186 | 420022 | ID=Msa1171000-mRNA-1:exon:122;Parent=Msa1171000-mRNA-1 |
| chr8_1 | exon | 421415 | 421612 | 421415 | ID=Msa1171000-mRNA-1:exon:121;Parent=Msa1171000-mRNA-1 |
| chr8_1 | exon | 421816 | 421941 | 421816 | ID=Msa1171000-mRNA-1:exon:120;Parent=Msa1171000-mRNA-1 |
| chr8_1 | exon | 422525 | 422701 | 422525 | ID=Msa1171000-mRNA-1:exon:119;Parent=Msa1171000-mRNA-1 |
| chr8_1 | exon | 424311 | 424784 | 424311 | ID=Msa1171000-mRNA-1:exon:118;Parent=Msa1171000-mRNA-1 |
| chr8_1 | five_prime_UTR | 424581 | 424784 | 424581 | ID=Msa1171000-mRNA-1:five_prime_utr;Parent=Msa1171000-mRNA-1 |
| chr8_1 | CDS | 424311 | 424580 | 424311 | ID=Msa1171000-mRNA-1:cds;Parent=Msa1171000-mRNA-1 |
| chr8_1 | CDS | 422525 | 422701 | 422525 | ID=Msa1171000-mRNA-1:cds;Parent=Msa1171000-mRNA-1 |
| chr8_1 | CDS | 421816 | 421941 | 421816 | ID=Msa1171000-mRNA-1:cds;Parent=Msa1171000-mRNA-1 |
| chr8_1 | CDS | 421415 | 421612 | 421415 | ID=Msa1171000-mRNA-1:cds;Parent=Msa1171000-mRNA-1 |
| chr8_1 | CDS | 420022 | 420186 | 420022 | ID=Msa1171000-mRNA-1:cds;Parent=Msa1171000-mRNA-1 |
| chr8_1 | CDS | 417833 | 418234 | 417833 | ID=Msa1171000-mRNA-1:cds;Parent=Msa1171000-mRNA-1 |
| chr8_1 | three_prime_UTR | 417525 | 417832 | 417525 | ID=Msa1171000-mRNA-1:three_prime_utr;Parent=Msa1171000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
