AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0044810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044810 MtrunA17_Chr1g0211501 92.641 462 27 3 1 462 14 468 0.0 855
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0044810 AT2G17033.4 50.704 426 198 5 36 458 54 470 6.45e-146 425
Msa0044810 AT2G17033.2 50.704 426 198 5 36 458 89 505 9.92e-146 426
Msa0044810 AT2G17033.1 50.704 426 198 5 36 458 88 504 1.03e-145 426
Msa0044810 AT2G17033.3 50.704 426 198 5 36 458 85 501 1.52e-145 425

Find 121 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACCTGGGTTCAGCTTATT+TGG 0.208986 1_1:+76409950 Msa0044810:CDS
GATAATATAAAGTAGAATTA+AGG 0.216659 1_1:+76410428 Msa0044810:three_prime_UTR
AATATGATTCTTTCAAGTTT+TGG 0.242120 1_1:+76409642 Msa0044810:CDS
GGATTCTAAAGAGGTGAAAT+TGG 0.277238 1_1:+76409914 Msa0044810:CDS
AATTAATGTTCTTACTTGTT+TGG 0.282850 1_1:-76410405 None:intergenic
AGTGGAGAGTAGTACGGATT+TGG 0.307534 1_1:-76408963 None:intergenic
TGAAGTAGCTTCGGAAATTA+AGG 0.315472 1_1:-76409232 None:intergenic
CTTACAAGGATGAGGAATTC+TGG 0.337094 1_1:+76409699 Msa0044810:CDS
TGTTGTGGATTTGAATGATT+TGG 0.343073 1_1:+76409785 Msa0044810:CDS
AAGGTAAGGCTGTCAAAATT+TGG 0.346114 1_1:+76410183 Msa0044810:CDS
GTTGATGAAATGGAGAATAA+TGG 0.350749 1_1:+76409594 Msa0044810:CDS
GCCGGTTTGAGAAGCGCGTT+TGG 0.359029 1_1:-76409316 None:intergenic
CTTATTTGGTTATGTTGCTT+TGG 0.360164 1_1:+76409964 Msa0044810:CDS
TTACTTGTTTGGCATTTCCT+TGG 0.361069 1_1:-76410394 None:intergenic
AGTATGTGGAAATGGTTTCT+TGG 0.378531 1_1:+76409676 Msa0044810:CDS
GGAAATTAAGGTCTGGGATT+CGG 0.380524 1_1:-76409220 None:intergenic
GAGATATTCGGTATTGGTAT+TGG 0.381717 1_1:-76408915 None:intergenic
TTTGTATGGATATGGAAGAT+TGG 0.382413 1_1:+76409545 Msa0044810:CDS
GCCTCGTGAGGCTGAGAATC+TGG 0.382565 1_1:+76409449 Msa0044810:CDS
CGGTGTAGCGTTTGTGTTTG+TGG 0.383943 1_1:-76409200 None:intergenic
TTGATGAAATGGAGAATAAT+GGG 0.391709 1_1:+76409595 Msa0044810:CDS
TGATTTCATTGTATTATGAA+TGG 0.392007 1_1:+76410227 Msa0044810:exon
GTGGAGAGTAGTACGGATTT+GGG 0.400880 1_1:-76408962 None:intergenic
ATGGGAAGCTACGGTGGTTA+AGG 0.401506 1_1:+76409848 Msa0044810:CDS
ATAATATAAAGTAGAATTAA+GGG 0.402297 1_1:+76410429 Msa0044810:three_prime_UTR
TTGTATGGATATGGAAGATT+GGG 0.404726 1_1:+76409546 Msa0044810:CDS
GAACAGAGTTGTTGATGAAA+TGG 0.410686 1_1:+76409584 Msa0044810:CDS
TTTGGTTATGTTGCTTTGGT+TGG 0.411930 1_1:+76409968 Msa0044810:CDS
TGAGGCTGAGAATCTGGTTC+GGG 0.416550 1_1:+76409455 Msa0044810:CDS
AGAGAGGAGGTGAGTGAGAG+TGG 0.417409 1_1:-76408981 None:intergenic
AGCGTTTGTGTTTGTGGAGT+AGG 0.421612 1_1:-76409194 None:intergenic
TCACGAGGAGTATGTGGAAA+TGG 0.423732 1_1:+76409668 Msa0044810:CDS
AGCTTCGGAAATTAAGGTCT+GGG 0.429865 1_1:-76409226 None:intergenic
ACGAATGAGATATTCGGTAT+TGG 0.429996 1_1:-76408921 None:intergenic
GCTTATGAATCCATGATTAG+TGG 0.441949 1_1:+76409408 Msa0044810:CDS
GCGTTTGTGTTTGTGGAGTA+GGG 0.442569 1_1:-76409193 None:intergenic
GAATTTACGAATGAGATATT+CGG 0.445371 1_1:-76408927 None:intergenic
TCTCTTCTATGCAAAACTCT+TGG 0.446048 1_1:+76409284 Msa0044810:CDS
GTGAGGCTGAGAATCTGGTT+CGG 0.450440 1_1:+76409454 Msa0044810:CDS
GGTTATGTTGCTTTGGTTGG+AGG 0.453621 1_1:+76409971 Msa0044810:CDS
TAGCTTCGGAAATTAAGGTC+TGG 0.456742 1_1:-76409227 None:intergenic
CTGCTTTGTTGCCAAAGGTA+AGG 0.456812 1_1:+76410169 Msa0044810:CDS
TGGGTTTGGAGTTGAGGAGG+AGG 0.457009 1_1:-76408803 None:intergenic
CTGAAATCACTGTGGTCTGT+GGG 0.457071 1_1:+76410039 Msa0044810:CDS
TCCAAACGCGCTTCTCAAAC+CGG 0.458542 1_1:+76409315 Msa0044810:CDS
CAACATTCCTCATTATCGTT+GGG 0.462227 1_1:-76409767 None:intergenic
GTGGAGTAGGGTGATTAAAT+CGG 0.462337 1_1:-76409181 None:intergenic
AAAGTTGAAAACAGCAGTAA+AGG 0.462420 1_1:-76410354 None:intergenic
AAAGTCCACTCAGGATTGAT+AGG 0.466016 1_1:+76410135 Msa0044810:CDS
GGTATTGGTATTGGTGTTTG+TGG 0.466026 1_1:-76408906 None:intergenic
CGAAGCTGGGTTTGGAGTTG+AGG 0.468448 1_1:-76408809 None:intergenic
TTAAATCGGCGATGATGGTT+GGG 0.470625 1_1:-76409167 None:intergenic
ATCACTGTGGTCTGTGGGGT+TGG 0.474623 1_1:+76410044 Msa0044810:CDS
AGAAGAGAGGTGGTGGTGAA+TGG 0.474702 1_1:-76409011 None:intergenic
GGTGATTAAATCGGCGATGA+TGG 0.475107 1_1:-76409172 None:intergenic
GAGTAGTACGGATTTGGGTG+AGG 0.475242 1_1:-76408957 None:intergenic
TGCACACAATCCACTAATCA+TGG 0.475560 1_1:-76409418 None:intergenic
TCTTTAAGCAATACTTTGAC+CGG 0.476216 1_1:-76410095 None:intergenic
GGGCGAGAGAAGAGAGGTGG+TGG 0.481844 1_1:-76409018 None:intergenic
AGTGAGAGTGGAGAGTAGTA+CGG 0.485591 1_1:-76408969 None:intergenic
TATCAAATGTTGCTTATCCA+AGG 0.489337 1_1:+76410377 Msa0044810:three_prime_UTR
ATTAAATCGGCGATGATGGT+TGG 0.492033 1_1:-76409168 None:intergenic
AAATGGTTTCTTGGCTTACA+AGG 0.492833 1_1:+76409685 Msa0044810:CDS
AGAGTTGTTGAATGTGTGTA+TGG 0.492964 1_1:+76409821 Msa0044810:CDS
TTGAAGAGGAAGTGTGAAGA+AGG 0.494562 1_1:-76409368 None:intergenic
CGTTGGGCAAGAATTTGAAA+CGG 0.501944 1_1:-76409751 None:intergenic
TTATAAGTTCTAACAGAAAA+CGG 0.505009 1_1:-76409726 None:intergenic
AAATTTGGTTATGTGAATTG+AGG 0.506066 1_1:+76410198 Msa0044810:CDS
ACAACATTCCTCATTATCGT+TGG 0.508259 1_1:-76409768 None:intergenic
GGATTTGCATGGATTTCACC+TGG 0.508564 1_1:+76409935 Msa0044810:CDS
GGTGAATGGTGGTCGGAGAG+AGG 0.511873 1_1:-76408997 None:intergenic
TGGAATTCACGAGGAGTATG+TGG 0.512841 1_1:+76409662 Msa0044810:CDS
TTTCTTGGCTTACAAGGATG+AGG 0.513035 1_1:+76409691 Msa0044810:CDS
TGAATGTGTGTATGGAAGGA+TGG 0.520905 1_1:+76409829 Msa0044810:CDS
CGTTGCACTCTAACGAAACA+AGG 0.530147 1_1:+76408857 Msa0044810:CDS
TTTAAACAAACAGATGGTGG+TGG 0.536003 1_1:+76409480 Msa0044810:CDS
GCTGAAATCACTGTGGTCTG+TGG 0.537614 1_1:+76410038 Msa0044810:CDS
TTTCGATGAGGTGATGGTGT+GGG 0.539150 1_1:+76409893 Msa0044810:CDS
ATTCTTGCCCAACGATAATG+AGG 0.542535 1_1:+76409760 Msa0044810:CDS
GAGGTGAAATTGGATTTGCA+TGG 0.550734 1_1:+76409924 Msa0044810:CDS
CGGGAATTTAAACAAACAGA+TGG 0.561502 1_1:+76409474 Msa0044810:CDS
GCGTTTGACGTAAATTGAAG+AGG 0.567328 1_1:-76409382 None:intergenic
TTGTTGAATGTGTGTATGGA+AGG 0.568777 1_1:+76409825 Msa0044810:CDS
GATTTGCATGGATTTCACCT+GGG 0.577909 1_1:+76409936 Msa0044810:CDS
CGGGGAGGGCGAGAGAAGAG+AGG 0.578723 1_1:-76409024 None:intergenic
AGCTGGGTTTGGAGTTGAGG+AGG 0.580179 1_1:-76408806 None:intergenic
CAGACCACAGTGATTTCAGC+AGG 0.584643 1_1:-76410035 None:intergenic
AACGATAATGAGGAATGTTG+TGG 0.586263 1_1:+76409770 Msa0044810:CDS
GGTTGGAGGAGATGCAGAAG+AGG 0.586274 1_1:+76409985 Msa0044810:CDS
ATATAGCAGCAAAATTGCAT+TGG 0.592055 1_1:-76410255 None:intergenic
ACTGGCTGCTTTGTTGCCAA+AGG 0.597676 1_1:+76410164 Msa0044810:CDS
TTAAACAAACAGATGGTGGT+GGG 0.600043 1_1:+76409481 Msa0044810:CDS
AGGTGGTGGTGAATGGTGGT+CGG 0.600519 1_1:-76409004 None:intergenic
GACTTGAATTCAAAAGCAGA+AGG 0.600743 1_1:-76409519 None:intergenic
AGAATAAGCGAAATCAAAGC+CGG 0.605755 1_1:-76409334 None:intergenic
CTATATATGAATGATGATGA+TGG 0.610277 1_1:+76410272 Msa0044810:three_prime_UTR
AAGTGTGAAGAAGGTTGTTG+AGG 0.610689 1_1:-76409359 None:intergenic
GAATGTGTGTATGGAAGGAT+GGG 0.610715 1_1:+76409830 Msa0044810:CDS
GCGAATCACAATGGTACACA+TGG 0.610730 1_1:+76409142 Msa0044810:CDS
AGAGAGGTGGTGGTGAATGG+TGG 0.612554 1_1:-76409008 None:intergenic
CAATGTGAGAGGAGAATCGC+CGG 0.620006 1_1:+76410076 Msa0044810:CDS
GAATTTAAACAAACAGATGG+TGG 0.622742 1_1:+76409477 Msa0044810:CDS
TTTCGTTAGAGTGCAACGAA+TGG 0.625820 1_1:-76408852 None:intergenic
TGAAGATGAAAAGTCCACTC+AGG 0.630228 1_1:+76410126 Msa0044810:CDS
AAAGAGTTAACTTACGGGGA+GGG 0.633431 1_1:-76409038 None:intergenic
ACCAGATTCTCAGCCTCACG+AGG 0.633510 1_1:-76409450 None:intergenic
GAATGGTGGTCGGAGAGAGG+AGG 0.636499 1_1:-76408994 None:intergenic
TATGGAAGGATGGGAAGCTA+CGG 0.639377 1_1:+76409839 Msa0044810:CDS
GGAGGGCGAGAGAAGAGAGG+TGG 0.639648 1_1:-76409021 None:intergenic
GATGGTGTGGGATTCTAAAG+AGG 0.643782 1_1:+76409905 Msa0044810:CDS
TGAAATCACTGTGGTCTGTG+GGG 0.648087 1_1:+76410040 Msa0044810:CDS
GGAAGGATGGGAAGCTACGG+TGG 0.648287 1_1:+76409842 Msa0044810:CDS
GATTAGTGGATTGTGTGCAA+TGG 0.654519 1_1:+76409422 Msa0044810:CDS
TAAGAATAAGCGAATCACAA+TGG 0.660243 1_1:+76409133 Msa0044810:CDS
TTCTTCCTATCAATCCTGAG+TGG 0.663898 1_1:-76410140 None:intergenic
GGAAAGCATAGCAATGTGAG+AGG 0.667903 1_1:+76410065 Msa0044810:CDS
AGGATTGATAGGAAGAACAC+TGG 0.687654 1_1:+76410146 Msa0044810:CDS
TGCAATGGATAAGCCTCGTG+AGG 0.694549 1_1:+76409437 Msa0044810:CDS
TAACCAAATAAGCTGAACCC+AGG 0.706791 1_1:-76409953 None:intergenic
GTTGCACTCTAACGAAACAA+GGG 0.711347 1_1:+76408858 Msa0044810:CDS
GATTCCTGCTGAAATCACTG+TGG 0.811897 1_1:+76410031 Msa0044810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATAAAGTAGAATTAA+GGG + chr1_1:76410429-76410448 Msa0044810:three_prime_UTR 10.0%
!! ATAATATAAAGTAGAATTAA+GGG + chr1_1:76410429-76410448 Msa0044810:three_prime_UTR 10.0%
!! GATAATATAAAGTAGAATTA+AGG + chr1_1:76410428-76410447 Msa0044810:three_prime_UTR 15.0%
!! GATAATATAAAGTAGAATTA+AGG + chr1_1:76410428-76410447 Msa0044810:three_prime_UTR 15.0%
!!! AATATGATTCTTTCAAGTTT+TGG + chr1_1:76409642-76409661 Msa0044810:CDS 20.0%
!!! TTATAAGTTCTAACAGAAAA+CGG - chr1_1:76409729-76409748 None:intergenic 20.0%
!! TGATTTCATTGTATTATGAA+TGG + chr1_1:76410227-76410246 Msa0044810:exon 20.0%
!! AATTAATGTTCTTACTTGTT+TGG - chr1_1:76410408-76410427 None:intergenic 20.0%
!!! AATATGATTCTTTCAAGTTT+TGG + chr1_1:76409642-76409661 Msa0044810:CDS 20.0%
!!! TTATAAGTTCTAACAGAAAA+CGG - chr1_1:76409729-76409748 None:intergenic 20.0%
!! TGATTTCATTGTATTATGAA+TGG + chr1_1:76410227-76410246 Msa0044810:exon 20.0%
!! AATTAATGTTCTTACTTGTT+TGG - chr1_1:76410408-76410427 None:intergenic 20.0%
! GAATTTACGAATGAGATATT+CGG - chr1_1:76408930-76408949 None:intergenic 25.0%
!! GAATTCAAGTCTATTTTGTA+TGG + chr1_1:76409531-76409550 Msa0044810:CDS 25.0%
!! AAGTCTATTTTGTATGGATA+TGG + chr1_1:76409537-76409556 Msa0044810:CDS 25.0%
! TTGATGAAATGGAGAATAAT+GGG + chr1_1:76409595-76409614 Msa0044810:CDS 25.0%
! AAATTTGGTTATGTGAATTG+AGG + chr1_1:76410198-76410217 Msa0044810:CDS 25.0%
!! CTATATATGAATGATGATGA+TGG + chr1_1:76410272-76410291 Msa0044810:three_prime_UTR 25.0%
! GAATTTACGAATGAGATATT+CGG - chr1_1:76408930-76408949 None:intergenic 25.0%
!! GAATTCAAGTCTATTTTGTA+TGG + chr1_1:76409531-76409550 Msa0044810:CDS 25.0%
!! AAGTCTATTTTGTATGGATA+TGG + chr1_1:76409537-76409556 Msa0044810:CDS 25.0%
! TTGATGAAATGGAGAATAAT+GGG + chr1_1:76409595-76409614 Msa0044810:CDS 25.0%
! AAATTTGGTTATGTGAATTG+AGG + chr1_1:76410198-76410217 Msa0044810:CDS 25.0%
!! CTATATATGAATGATGATGA+TGG + chr1_1:76410272-76410291 Msa0044810:three_prime_UTR 25.0%
!!! GTTTTTTTTAAGACGAAGCT+GGG - chr1_1:76408825-76408844 None:intergenic 30.0%
!!! TGTTTTTTTTAAGACGAAGC+TGG - chr1_1:76408826-76408845 None:intergenic 30.0%
AAATGAGATGAGGGTAATTT+GGG - chr1_1:76409068-76409087 None:intergenic 30.0%
GAGATTATGAAATGAGATGA+GGG - chr1_1:76409077-76409096 None:intergenic 30.0%
TAAGAATAAGCGAATCACAA+TGG + chr1_1:76409133-76409152 Msa0044810:CDS 30.0%
GAATTTAAACAAACAGATGG+TGG + chr1_1:76409477-76409496 Msa0044810:CDS 30.0%
TTTGTATGGATATGGAAGAT+TGG + chr1_1:76409545-76409564 Msa0044810:CDS 30.0%
TTGTATGGATATGGAAGATT+GGG + chr1_1:76409546-76409565 Msa0044810:CDS 30.0%
! GTTGATGAAATGGAGAATAA+TGG + chr1_1:76409594-76409613 Msa0044810:CDS 30.0%
TGTTGTGGATTTGAATGATT+TGG + chr1_1:76409785-76409804 Msa0044810:CDS 30.0%
! CTTATTTGGTTATGTTGCTT+TGG + chr1_1:76409964-76409983 Msa0044810:CDS 30.0%
TCTTTAAGCAATACTTTGAC+CGG - chr1_1:76410098-76410117 None:intergenic 30.0%
ATATAGCAGCAAAATTGCAT+TGG - chr1_1:76410258-76410277 None:intergenic 30.0%
AAAGTTGAAAACAGCAGTAA+AGG - chr1_1:76410357-76410376 None:intergenic 30.0%
! TATCAAATGTTGCTTATCCA+AGG + chr1_1:76410377-76410396 Msa0044810:three_prime_UTR 30.0%
!!! GTTTTTTTTAAGACGAAGCT+GGG - chr1_1:76408825-76408844 None:intergenic 30.0%
!!! TGTTTTTTTTAAGACGAAGC+TGG - chr1_1:76408826-76408845 None:intergenic 30.0%
AAATGAGATGAGGGTAATTT+GGG - chr1_1:76409068-76409087 None:intergenic 30.0%
GAGATTATGAAATGAGATGA+GGG - chr1_1:76409077-76409096 None:intergenic 30.0%
TAAGAATAAGCGAATCACAA+TGG + chr1_1:76409133-76409152 Msa0044810:CDS 30.0%
GAATTTAAACAAACAGATGG+TGG + chr1_1:76409477-76409496 Msa0044810:CDS 30.0%
TTTGTATGGATATGGAAGAT+TGG + chr1_1:76409545-76409564 Msa0044810:CDS 30.0%
TTGTATGGATATGGAAGATT+GGG + chr1_1:76409546-76409565 Msa0044810:CDS 30.0%
! GTTGATGAAATGGAGAATAA+TGG + chr1_1:76409594-76409613 Msa0044810:CDS 30.0%
TGTTGTGGATTTGAATGATT+TGG + chr1_1:76409785-76409804 Msa0044810:CDS 30.0%
! CTTATTTGGTTATGTTGCTT+TGG + chr1_1:76409964-76409983 Msa0044810:CDS 30.0%
TCTTTAAGCAATACTTTGAC+CGG - chr1_1:76410098-76410117 None:intergenic 30.0%
ATATAGCAGCAAAATTGCAT+TGG - chr1_1:76410258-76410277 None:intergenic 30.0%
AAAGTTGAAAACAGCAGTAA+AGG - chr1_1:76410357-76410376 None:intergenic 30.0%
! TATCAAATGTTGCTTATCCA+AGG + chr1_1:76410377-76410396 Msa0044810:three_prime_UTR 30.0%
!! GAGATATTCGGTATTGGTAT+TGG - chr1_1:76408918-76408937 None:intergenic 35.0%
ACGAATGAGATATTCGGTAT+TGG - chr1_1:76408924-76408943 None:intergenic 35.0%
GAGAAAAGAGTTAACTTACG+GGG - chr1_1:76409045-76409064 None:intergenic 35.0%
GGAGAAAAGAGTTAACTTAC+GGG - chr1_1:76409046-76409065 None:intergenic 35.0%
GGGAGAAAAGAGTTAACTTA+CGG - chr1_1:76409047-76409066 None:intergenic 35.0%
AATGAGATGAGGGTAATTTG+GGG - chr1_1:76409067-76409086 None:intergenic 35.0%
GAAATGAGATGAGGGTAATT+TGG - chr1_1:76409069-76409088 None:intergenic 35.0%
GGAGATTATGAAATGAGATG+AGG - chr1_1:76409078-76409097 None:intergenic 35.0%
!! AAGAAATGGAAGGGTTAGTT+TGG - chr1_1:76409099-76409118 None:intergenic 35.0%
TGAAGTAGCTTCGGAAATTA+AGG - chr1_1:76409235-76409254 None:intergenic 35.0%
!!! GTTGAGTTTTGAAGTAGCTT+CGG - chr1_1:76409244-76409263 None:intergenic 35.0%
TCTCTTCTATGCAAAACTCT+TGG + chr1_1:76409284-76409303 Msa0044810:CDS 35.0%
AGAATAAGCGAAATCAAAGC+CGG - chr1_1:76409337-76409356 None:intergenic 35.0%
GCTTATGAATCCATGATTAG+TGG + chr1_1:76409408-76409427 Msa0044810:CDS 35.0%
CGGGAATTTAAACAAACAGA+TGG + chr1_1:76409474-76409493 Msa0044810:CDS 35.0%
! TTTAAACAAACAGATGGTGG+TGG + chr1_1:76409480-76409499 Msa0044810:CDS 35.0%
! TTAAACAAACAGATGGTGGT+GGG + chr1_1:76409481-76409500 Msa0044810:CDS 35.0%
GACTTGAATTCAAAAGCAGA+AGG - chr1_1:76409522-76409541 None:intergenic 35.0%
! GAACAGAGTTGTTGATGAAA+TGG + chr1_1:76409584-76409603 Msa0044810:CDS 35.0%
!!! TTCAAGTTTTGGAATTCACG+AGG + chr1_1:76409653-76409672 Msa0044810:CDS 35.0%
AGTATGTGGAAATGGTTTCT+TGG + chr1_1:76409676-76409695 Msa0044810:CDS 35.0%
AAATGGTTTCTTGGCTTACA+AGG + chr1_1:76409685-76409704 Msa0044810:CDS 35.0%
CAACATTCCTCATTATCGTT+GGG - chr1_1:76409770-76409789 None:intergenic 35.0%
ACAACATTCCTCATTATCGT+TGG - chr1_1:76409771-76409790 None:intergenic 35.0%
AACGATAATGAGGAATGTTG+TGG + chr1_1:76409770-76409789 Msa0044810:CDS 35.0%
AGAGTTGTTGAATGTGTGTA+TGG + chr1_1:76409821-76409840 Msa0044810:CDS 35.0%
TTGTTGAATGTGTGTATGGA+AGG + chr1_1:76409825-76409844 Msa0044810:CDS 35.0%
! GTGTAATGTGATTTTCGATG+AGG + chr1_1:76409881-76409900 Msa0044810:CDS 35.0%
! GGATTCTAAAGAGGTGAAAT+TGG + chr1_1:76409914-76409933 Msa0044810:CDS 35.0%
!! TTTGGTTATGTTGCTTTGGT+TGG + chr1_1:76409968-76409987 Msa0044810:CDS 35.0%
!! AATTTTGACAGCCTTACCTT+TGG - chr1_1:76410183-76410202 None:intergenic 35.0%
AAGGTAAGGCTGTCAAAATT+TGG + chr1_1:76410183-76410202 Msa0044810:CDS 35.0%
TTACTTGTTTGGCATTTCCT+TGG - chr1_1:76410397-76410416 None:intergenic 35.0%
!! GAGATATTCGGTATTGGTAT+TGG - chr1_1:76408918-76408937 None:intergenic 35.0%
ACGAATGAGATATTCGGTAT+TGG - chr1_1:76408924-76408943 None:intergenic 35.0%
GAGAAAAGAGTTAACTTACG+GGG - chr1_1:76409045-76409064 None:intergenic 35.0%
GGAGAAAAGAGTTAACTTAC+GGG - chr1_1:76409046-76409065 None:intergenic 35.0%
GGGAGAAAAGAGTTAACTTA+CGG - chr1_1:76409047-76409066 None:intergenic 35.0%
AATGAGATGAGGGTAATTTG+GGG - chr1_1:76409067-76409086 None:intergenic 35.0%
GAAATGAGATGAGGGTAATT+TGG - chr1_1:76409069-76409088 None:intergenic 35.0%
GGAGATTATGAAATGAGATG+AGG - chr1_1:76409078-76409097 None:intergenic 35.0%
!! AAGAAATGGAAGGGTTAGTT+TGG - chr1_1:76409099-76409118 None:intergenic 35.0%
TGAAGTAGCTTCGGAAATTA+AGG - chr1_1:76409235-76409254 None:intergenic 35.0%
!!! GTTGAGTTTTGAAGTAGCTT+CGG - chr1_1:76409244-76409263 None:intergenic 35.0%
TCTCTTCTATGCAAAACTCT+TGG + chr1_1:76409284-76409303 Msa0044810:CDS 35.0%
AGAATAAGCGAAATCAAAGC+CGG - chr1_1:76409337-76409356 None:intergenic 35.0%
GCTTATGAATCCATGATTAG+TGG + chr1_1:76409408-76409427 Msa0044810:CDS 35.0%
CGGGAATTTAAACAAACAGA+TGG + chr1_1:76409474-76409493 Msa0044810:CDS 35.0%
! TTTAAACAAACAGATGGTGG+TGG + chr1_1:76409480-76409499 Msa0044810:CDS 35.0%
! TTAAACAAACAGATGGTGGT+GGG + chr1_1:76409481-76409500 Msa0044810:CDS 35.0%
GACTTGAATTCAAAAGCAGA+AGG - chr1_1:76409522-76409541 None:intergenic 35.0%
! GAACAGAGTTGTTGATGAAA+TGG + chr1_1:76409584-76409603 Msa0044810:CDS 35.0%
!!! TTCAAGTTTTGGAATTCACG+AGG + chr1_1:76409653-76409672 Msa0044810:CDS 35.0%
AGTATGTGGAAATGGTTTCT+TGG + chr1_1:76409676-76409695 Msa0044810:CDS 35.0%
AAATGGTTTCTTGGCTTACA+AGG + chr1_1:76409685-76409704 Msa0044810:CDS 35.0%
CAACATTCCTCATTATCGTT+GGG - chr1_1:76409770-76409789 None:intergenic 35.0%
ACAACATTCCTCATTATCGT+TGG - chr1_1:76409771-76409790 None:intergenic 35.0%
AACGATAATGAGGAATGTTG+TGG + chr1_1:76409770-76409789 Msa0044810:CDS 35.0%
AGAGTTGTTGAATGTGTGTA+TGG + chr1_1:76409821-76409840 Msa0044810:CDS 35.0%
TTGTTGAATGTGTGTATGGA+AGG + chr1_1:76409825-76409844 Msa0044810:CDS 35.0%
! GTGTAATGTGATTTTCGATG+AGG + chr1_1:76409881-76409900 Msa0044810:CDS 35.0%
! GGATTCTAAAGAGGTGAAAT+TGG + chr1_1:76409914-76409933 Msa0044810:CDS 35.0%
!! TTTGGTTATGTTGCTTTGGT+TGG + chr1_1:76409968-76409987 Msa0044810:CDS 35.0%
!! AATTTTGACAGCCTTACCTT+TGG - chr1_1:76410183-76410202 None:intergenic 35.0%
AAGGTAAGGCTGTCAAAATT+TGG + chr1_1:76410183-76410202 Msa0044810:CDS 35.0%
TTACTTGTTTGGCATTTCCT+TGG - chr1_1:76410397-76410416 None:intergenic 35.0%
!!! TTTTAAGACGAAGCTGGGTT+TGG - chr1_1:76408820-76408839 None:intergenic 40.0%
TTTCGTTAGAGTGCAACGAA+TGG - chr1_1:76408855-76408874 None:intergenic 40.0%
GTTGCACTCTAACGAAACAA+GGG + chr1_1:76408858-76408877 Msa0044810:CDS 40.0%
!! TTGTGGTTGAGAGTTTTGTG+AGG - chr1_1:76408892-76408911 None:intergenic 40.0%
!! GGTATTGGTATTGGTGTTTG+TGG - chr1_1:76408909-76408928 None:intergenic 40.0%
AAAGAGTTAACTTACGGGGA+GGG - chr1_1:76409041-76409060 None:intergenic 40.0%
AAAAGAGTTAACTTACGGGG+AGG - chr1_1:76409042-76409061 None:intergenic 40.0%
AGCTGCAACAAGAAATGGAA+GGG - chr1_1:76409108-76409127 None:intergenic 40.0%
TGTAGAGCTGCAACAAGAAA+TGG - chr1_1:76409113-76409132 None:intergenic 40.0%
! TTAAATCGGCGATGATGGTT+GGG - chr1_1:76409170-76409189 None:intergenic 40.0%
! ATTAAATCGGCGATGATGGT+TGG - chr1_1:76409171-76409190 None:intergenic 40.0%
GTGGAGTAGGGTGATTAAAT+CGG - chr1_1:76409184-76409203 None:intergenic 40.0%
! GGAAATTAAGGTCTGGGATT+CGG - chr1_1:76409223-76409242 None:intergenic 40.0%
AGCTTCGGAAATTAAGGTCT+GGG - chr1_1:76409229-76409248 None:intergenic 40.0%
TAGCTTCGGAAATTAAGGTC+TGG - chr1_1:76409230-76409249 None:intergenic 40.0%
AAGTGTGAAGAAGGTTGTTG+AGG - chr1_1:76409362-76409381 None:intergenic 40.0%
! TTGAAGAGGAAGTGTGAAGA+AGG - chr1_1:76409371-76409390 None:intergenic 40.0%
GCGTTTGACGTAAATTGAAG+AGG - chr1_1:76409385-76409404 None:intergenic 40.0%
TGCACACAATCCACTAATCA+TGG - chr1_1:76409421-76409440 None:intergenic 40.0%
!! GATTAGTGGATTGTGTGCAA+TGG + chr1_1:76409422-76409441 Msa0044810:CDS 40.0%
TTTCTTGGCTTACAAGGATG+AGG + chr1_1:76409691-76409710 Msa0044810:CDS 40.0%
CTTACAAGGATGAGGAATTC+TGG + chr1_1:76409699-76409718 Msa0044810:CDS 40.0%
CGTTGGGCAAGAATTTGAAA+CGG - chr1_1:76409754-76409773 None:intergenic 40.0%
ATTCTTGCCCAACGATAATG+AGG + chr1_1:76409760-76409779 Msa0044810:CDS 40.0%
TGAATGTGTGTATGGAAGGA+TGG + chr1_1:76409829-76409848 Msa0044810:CDS 40.0%
GAATGTGTGTATGGAAGGAT+GGG + chr1_1:76409830-76409849 Msa0044810:CDS 40.0%
! TGTGATTTTCGATGAGGTGA+TGG + chr1_1:76409887-76409906 Msa0044810:CDS 40.0%
GAGGTGAAATTGGATTTGCA+TGG + chr1_1:76409924-76409943 Msa0044810:CDS 40.0%
GATTTGCATGGATTTCACCT+GGG + chr1_1:76409936-76409955 Msa0044810:CDS 40.0%
TAACCAAATAAGCTGAACCC+AGG - chr1_1:76409956-76409975 None:intergenic 40.0%
TGAAGATGAAAAGTCCACTC+AGG + chr1_1:76410126-76410145 Msa0044810:CDS 40.0%
AAAGTCCACTCAGGATTGAT+AGG + chr1_1:76410135-76410154 Msa0044810:CDS 40.0%
TTCTTCCTATCAATCCTGAG+TGG - chr1_1:76410143-76410162 None:intergenic 40.0%
AGGATTGATAGGAAGAACAC+TGG + chr1_1:76410146-76410165 Msa0044810:CDS 40.0%
!!! TTTTAAGACGAAGCTGGGTT+TGG - chr1_1:76408820-76408839 None:intergenic 40.0%
TTTCGTTAGAGTGCAACGAA+TGG - chr1_1:76408855-76408874 None:intergenic 40.0%
GTTGCACTCTAACGAAACAA+GGG + chr1_1:76408858-76408877 Msa0044810:CDS 40.0%
!! TTGTGGTTGAGAGTTTTGTG+AGG - chr1_1:76408892-76408911 None:intergenic 40.0%
!! GGTATTGGTATTGGTGTTTG+TGG - chr1_1:76408909-76408928 None:intergenic 40.0%
AAAGAGTTAACTTACGGGGA+GGG - chr1_1:76409041-76409060 None:intergenic 40.0%
AAAAGAGTTAACTTACGGGG+AGG - chr1_1:76409042-76409061 None:intergenic 40.0%
AGCTGCAACAAGAAATGGAA+GGG - chr1_1:76409108-76409127 None:intergenic 40.0%
TGTAGAGCTGCAACAAGAAA+TGG - chr1_1:76409113-76409132 None:intergenic 40.0%
! TTAAATCGGCGATGATGGTT+GGG - chr1_1:76409170-76409189 None:intergenic 40.0%
! ATTAAATCGGCGATGATGGT+TGG - chr1_1:76409171-76409190 None:intergenic 40.0%
GTGGAGTAGGGTGATTAAAT+CGG - chr1_1:76409184-76409203 None:intergenic 40.0%
! GGAAATTAAGGTCTGGGATT+CGG - chr1_1:76409223-76409242 None:intergenic 40.0%
AGCTTCGGAAATTAAGGTCT+GGG - chr1_1:76409229-76409248 None:intergenic 40.0%
TAGCTTCGGAAATTAAGGTC+TGG - chr1_1:76409230-76409249 None:intergenic 40.0%
AAGTGTGAAGAAGGTTGTTG+AGG - chr1_1:76409362-76409381 None:intergenic 40.0%
! TTGAAGAGGAAGTGTGAAGA+AGG - chr1_1:76409371-76409390 None:intergenic 40.0%
GCGTTTGACGTAAATTGAAG+AGG - chr1_1:76409385-76409404 None:intergenic 40.0%
TGCACACAATCCACTAATCA+TGG - chr1_1:76409421-76409440 None:intergenic 40.0%
!! GATTAGTGGATTGTGTGCAA+TGG + chr1_1:76409422-76409441 Msa0044810:CDS 40.0%
TTTCTTGGCTTACAAGGATG+AGG + chr1_1:76409691-76409710 Msa0044810:CDS 40.0%
CTTACAAGGATGAGGAATTC+TGG + chr1_1:76409699-76409718 Msa0044810:CDS 40.0%
CGTTGGGCAAGAATTTGAAA+CGG - chr1_1:76409754-76409773 None:intergenic 40.0%
ATTCTTGCCCAACGATAATG+AGG + chr1_1:76409760-76409779 Msa0044810:CDS 40.0%
TGAATGTGTGTATGGAAGGA+TGG + chr1_1:76409829-76409848 Msa0044810:CDS 40.0%
GAATGTGTGTATGGAAGGAT+GGG + chr1_1:76409830-76409849 Msa0044810:CDS 40.0%
! TGTGATTTTCGATGAGGTGA+TGG + chr1_1:76409887-76409906 Msa0044810:CDS 40.0%
GAGGTGAAATTGGATTTGCA+TGG + chr1_1:76409924-76409943 Msa0044810:CDS 40.0%
GATTTGCATGGATTTCACCT+GGG + chr1_1:76409936-76409955 Msa0044810:CDS 40.0%
TAACCAAATAAGCTGAACCC+AGG - chr1_1:76409956-76409975 None:intergenic 40.0%
TGAAGATGAAAAGTCCACTC+AGG + chr1_1:76410126-76410145 Msa0044810:CDS 40.0%
AAAGTCCACTCAGGATTGAT+AGG + chr1_1:76410135-76410154 Msa0044810:CDS 40.0%
TTCTTCCTATCAATCCTGAG+TGG - chr1_1:76410143-76410162 None:intergenic 40.0%
AGGATTGATAGGAAGAACAC+TGG + chr1_1:76410146-76410165 Msa0044810:CDS 40.0%
CGTTGCACTCTAACGAAACA+AGG + chr1_1:76408857-76408876 Msa0044810:CDS 45.0%
GTGGAGAGTAGTACGGATTT+GGG - chr1_1:76408965-76408984 None:intergenic 45.0%
AGTGGAGAGTAGTACGGATT+TGG - chr1_1:76408966-76408985 None:intergenic 45.0%
AGTGAGAGTGGAGAGTAGTA+CGG - chr1_1:76408972-76408991 None:intergenic 45.0%
GAGCTGCAACAAGAAATGGA+AGG - chr1_1:76409109-76409128 None:intergenic 45.0%
GCGAATCACAATGGTACACA+TGG + chr1_1:76409142-76409161 Msa0044810:CDS 45.0%
GGTGATTAAATCGGCGATGA+TGG - chr1_1:76409175-76409194 None:intergenic 45.0%
GCGTTTGTGTTTGTGGAGTA+GGG - chr1_1:76409196-76409215 None:intergenic 45.0%
AGCGTTTGTGTTTGTGGAGT+AGG - chr1_1:76409197-76409216 None:intergenic 45.0%
! TGGAATTCACGAGGAGTATG+TGG + chr1_1:76409662-76409681 Msa0044810:CDS 45.0%
! TCACGAGGAGTATGTGGAAA+TGG + chr1_1:76409668-76409687 Msa0044810:CDS 45.0%
TATGGAAGGATGGGAAGCTA+CGG + chr1_1:76409839-76409858 Msa0044810:CDS 45.0%
!! TTTTCGATGAGGTGATGGTG+TGG + chr1_1:76409892-76409911 Msa0044810:CDS 45.0%
! TTTCGATGAGGTGATGGTGT+GGG + chr1_1:76409893-76409912 Msa0044810:CDS 45.0%
! GATGGTGTGGGATTCTAAAG+AGG + chr1_1:76409905-76409924 Msa0044810:CDS 45.0%
GGATTTGCATGGATTTCACC+TGG + chr1_1:76409935-76409954 Msa0044810:CDS 45.0%
TCACCTGGGTTCAGCTTATT+TGG + chr1_1:76409950-76409969 Msa0044810:CDS 45.0%
!! GGTTATGTTGCTTTGGTTGG+AGG + chr1_1:76409971-76409990 Msa0044810:CDS 45.0%
GATTCCTGCTGAAATCACTG+TGG + chr1_1:76410031-76410050 Msa0044810:CDS 45.0%
CTGAAATCACTGTGGTCTGT+GGG + chr1_1:76410039-76410058 Msa0044810:CDS 45.0%
TGAAATCACTGTGGTCTGTG+GGG + chr1_1:76410040-76410059 Msa0044810:CDS 45.0%
! GGAAAGCATAGCAATGTGAG+AGG + chr1_1:76410065-76410084 Msa0044810:CDS 45.0%
! CTGCTTTGTTGCCAAAGGTA+AGG + chr1_1:76410169-76410188 Msa0044810:CDS 45.0%
CGTTGCACTCTAACGAAACA+AGG + chr1_1:76408857-76408876 Msa0044810:CDS 45.0%
GTGGAGAGTAGTACGGATTT+GGG - chr1_1:76408965-76408984 None:intergenic 45.0%
AGTGGAGAGTAGTACGGATT+TGG - chr1_1:76408966-76408985 None:intergenic 45.0%
AGTGAGAGTGGAGAGTAGTA+CGG - chr1_1:76408972-76408991 None:intergenic 45.0%
GAGCTGCAACAAGAAATGGA+AGG - chr1_1:76409109-76409128 None:intergenic 45.0%
GCGAATCACAATGGTACACA+TGG + chr1_1:76409142-76409161 Msa0044810:CDS 45.0%
GGTGATTAAATCGGCGATGA+TGG - chr1_1:76409175-76409194 None:intergenic 45.0%
GCGTTTGTGTTTGTGGAGTA+GGG - chr1_1:76409196-76409215 None:intergenic 45.0%
AGCGTTTGTGTTTGTGGAGT+AGG - chr1_1:76409197-76409216 None:intergenic 45.0%
! TGGAATTCACGAGGAGTATG+TGG + chr1_1:76409662-76409681 Msa0044810:CDS 45.0%
! TCACGAGGAGTATGTGGAAA+TGG + chr1_1:76409668-76409687 Msa0044810:CDS 45.0%
TATGGAAGGATGGGAAGCTA+CGG + chr1_1:76409839-76409858 Msa0044810:CDS 45.0%
!! TTTTCGATGAGGTGATGGTG+TGG + chr1_1:76409892-76409911 Msa0044810:CDS 45.0%
! TTTCGATGAGGTGATGGTGT+GGG + chr1_1:76409893-76409912 Msa0044810:CDS 45.0%
! GATGGTGTGGGATTCTAAAG+AGG + chr1_1:76409905-76409924 Msa0044810:CDS 45.0%
GGATTTGCATGGATTTCACC+TGG + chr1_1:76409935-76409954 Msa0044810:CDS 45.0%
TCACCTGGGTTCAGCTTATT+TGG + chr1_1:76409950-76409969 Msa0044810:CDS 45.0%
!! GGTTATGTTGCTTTGGTTGG+AGG + chr1_1:76409971-76409990 Msa0044810:CDS 45.0%
GATTCCTGCTGAAATCACTG+TGG + chr1_1:76410031-76410050 Msa0044810:CDS 45.0%
CTGAAATCACTGTGGTCTGT+GGG + chr1_1:76410039-76410058 Msa0044810:CDS 45.0%
TGAAATCACTGTGGTCTGTG+GGG + chr1_1:76410040-76410059 Msa0044810:CDS 45.0%
! GGAAAGCATAGCAATGTGAG+AGG + chr1_1:76410065-76410084 Msa0044810:CDS 45.0%
! CTGCTTTGTTGCCAAAGGTA+AGG + chr1_1:76410169-76410188 Msa0044810:CDS 45.0%
GAGTAGTACGGATTTGGGTG+AGG - chr1_1:76408960-76408979 None:intergenic 50.0%
! AGAAGAGAGGTGGTGGTGAA+TGG - chr1_1:76409014-76409033 None:intergenic 50.0%
CGGTGTAGCGTTTGTGTTTG+TGG - chr1_1:76409203-76409222 None:intergenic 50.0%
TCCAAACGCGCTTCTCAAAC+CGG + chr1_1:76409315-76409334 Msa0044810:CDS 50.0%
TGCAATGGATAAGCCTCGTG+AGG + chr1_1:76409437-76409456 Msa0044810:CDS 50.0%
GTGAGGCTGAGAATCTGGTT+CGG + chr1_1:76409454-76409473 Msa0044810:CDS 50.0%
! TGAGGCTGAGAATCTGGTTC+GGG + chr1_1:76409455-76409474 Msa0044810:CDS 50.0%
ATGGGAAGCTACGGTGGTTA+AGG + chr1_1:76409848-76409867 Msa0044810:CDS 50.0%
CAGACCACAGTGATTTCAGC+AGG - chr1_1:76410038-76410057 None:intergenic 50.0%
GCTGAAATCACTGTGGTCTG+TGG + chr1_1:76410038-76410057 Msa0044810:CDS 50.0%
CAATGTGAGAGGAGAATCGC+CGG + chr1_1:76410076-76410095 Msa0044810:CDS 50.0%
! ACTGGCTGCTTTGTTGCCAA+AGG + chr1_1:76410164-76410183 Msa0044810:CDS 50.0%
GAGTAGTACGGATTTGGGTG+AGG - chr1_1:76408960-76408979 None:intergenic 50.0%
! AGAAGAGAGGTGGTGGTGAA+TGG - chr1_1:76409014-76409033 None:intergenic 50.0%
CGGTGTAGCGTTTGTGTTTG+TGG - chr1_1:76409203-76409222 None:intergenic 50.0%
TCCAAACGCGCTTCTCAAAC+CGG + chr1_1:76409315-76409334 Msa0044810:CDS 50.0%
TGCAATGGATAAGCCTCGTG+AGG + chr1_1:76409437-76409456 Msa0044810:CDS 50.0%
GTGAGGCTGAGAATCTGGTT+CGG + chr1_1:76409454-76409473 Msa0044810:CDS 50.0%
! TGAGGCTGAGAATCTGGTTC+GGG + chr1_1:76409455-76409474 Msa0044810:CDS 50.0%
ATGGGAAGCTACGGTGGTTA+AGG + chr1_1:76409848-76409867 Msa0044810:CDS 50.0%
CAGACCACAGTGATTTCAGC+AGG - chr1_1:76410038-76410057 None:intergenic 50.0%
GCTGAAATCACTGTGGTCTG+TGG + chr1_1:76410038-76410057 Msa0044810:CDS 50.0%
CAATGTGAGAGGAGAATCGC+CGG + chr1_1:76410076-76410095 Msa0044810:CDS 50.0%
! ACTGGCTGCTTTGTTGCCAA+AGG + chr1_1:76410164-76410183 Msa0044810:CDS 50.0%
! TGGGTTTGGAGTTGAGGAGG+AGG - chr1_1:76408806-76408825 None:intergenic 55.0%
! AGCTGGGTTTGGAGTTGAGG+AGG - chr1_1:76408809-76408828 None:intergenic 55.0%
! CGAAGCTGGGTTTGGAGTTG+AGG - chr1_1:76408812-76408831 None:intergenic 55.0%
AGAGAGGAGGTGAGTGAGAG+TGG - chr1_1:76408984-76409003 None:intergenic 55.0%
! AGGTGGTGGTGAATGGTGGT+CGG - chr1_1:76409007-76409026 None:intergenic 55.0%
! AGAGAGGTGGTGGTGAATGG+TGG - chr1_1:76409011-76409030 None:intergenic 55.0%
ACCAGATTCTCAGCCTCACG+AGG - chr1_1:76409453-76409472 None:intergenic 55.0%
GGTTGGAGGAGATGCAGAAG+AGG + chr1_1:76409985-76410004 Msa0044810:CDS 55.0%
ATCACTGTGGTCTGTGGGGT+TGG + chr1_1:76410044-76410063 Msa0044810:CDS 55.0%
! TGGGTTTGGAGTTGAGGAGG+AGG - chr1_1:76408806-76408825 None:intergenic 55.0%
! AGCTGGGTTTGGAGTTGAGG+AGG - chr1_1:76408809-76408828 None:intergenic 55.0%
! CGAAGCTGGGTTTGGAGTTG+AGG - chr1_1:76408812-76408831 None:intergenic 55.0%
AGAGAGGAGGTGAGTGAGAG+TGG - chr1_1:76408984-76409003 None:intergenic 55.0%
! AGGTGGTGGTGAATGGTGGT+CGG - chr1_1:76409007-76409026 None:intergenic 55.0%
! AGAGAGGTGGTGGTGAATGG+TGG - chr1_1:76409011-76409030 None:intergenic 55.0%
ACCAGATTCTCAGCCTCACG+AGG - chr1_1:76409453-76409472 None:intergenic 55.0%
GGTTGGAGGAGATGCAGAAG+AGG + chr1_1:76409985-76410004 Msa0044810:CDS 55.0%
ATCACTGTGGTCTGTGGGGT+TGG + chr1_1:76410044-76410063 Msa0044810:CDS 55.0%
GAATGGTGGTCGGAGAGAGG+AGG - chr1_1:76408997-76409016 None:intergenic 60.0%
GGTGAATGGTGGTCGGAGAG+AGG - chr1_1:76409000-76409019 None:intergenic 60.0%
!! GCCGGTTTGAGAAGCGCGTT+TGG - chr1_1:76409319-76409338 None:intergenic 60.0%
GCCTCGTGAGGCTGAGAATC+TGG + chr1_1:76409449-76409468 Msa0044810:CDS 60.0%
GGAAGGATGGGAAGCTACGG+TGG + chr1_1:76409842-76409861 Msa0044810:CDS 60.0%
GAATGGTGGTCGGAGAGAGG+AGG - chr1_1:76408997-76409016 None:intergenic 60.0%
GGTGAATGGTGGTCGGAGAG+AGG - chr1_1:76409000-76409019 None:intergenic 60.0%
!! GCCGGTTTGAGAAGCGCGTT+TGG - chr1_1:76409319-76409338 None:intergenic 60.0%
GCCTCGTGAGGCTGAGAATC+TGG + chr1_1:76409449-76409468 Msa0044810:CDS 60.0%
GGAAGGATGGGAAGCTACGG+TGG + chr1_1:76409842-76409861 Msa0044810:CDS 60.0%
GGGCGAGAGAAGAGAGGTGG+TGG - chr1_1:76409021-76409040 None:intergenic 65.0%
GGAGGGCGAGAGAAGAGAGG+TGG - chr1_1:76409024-76409043 None:intergenic 65.0%
GGGCGAGAGAAGAGAGGTGG+TGG - chr1_1:76409021-76409040 None:intergenic 65.0%
GGAGGGCGAGAGAAGAGAGG+TGG - chr1_1:76409024-76409043 None:intergenic 65.0%
CGGGGAGGGCGAGAGAAGAG+AGG - chr1_1:76409027-76409046 None:intergenic 70.0%
CGGGGAGGGCGAGAGAAGAG+AGG - chr1_1:76409027-76409046 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 76408755 76410487 76408755 ID=Msa0044810;Name=Msa0044810
chr1_1 mRNA 76408755 76410487 76408755 ID=Msa0044810-mRNA-1;Parent=Msa0044810;Name=Msa0044810-mRNA-1;_AED=0.01;_eAED=0.01;_QI=6|1|1|1|1|1|2|258|462
chr1_1 exon 76408755 76409045 76408755 ID=Msa0044810-mRNA-1:exon:25949;Parent=Msa0044810-mRNA-1
chr1_1 exon 76409126 76410487 76409126 ID=Msa0044810-mRNA-1:exon:25950;Parent=Msa0044810-mRNA-1
chr1_1 five_prime_UTR 76408755 76408760 76408755 ID=Msa0044810-mRNA-1:five_prime_utr;Parent=Msa0044810-mRNA-1
chr1_1 CDS 76408761 76409045 76408761 ID=Msa0044810-mRNA-1:cds;Parent=Msa0044810-mRNA-1
chr1_1 CDS 76409126 76410229 76409126 ID=Msa0044810-mRNA-1:cds;Parent=Msa0044810-mRNA-1
chr1_1 three_prime_UTR 76410230 76410487 76410230 ID=Msa0044810-mRNA-1:three_prime_utr;Parent=Msa0044810-mRNA-1
Gene Sequence

>Msa0044810

ATGACGCTGAGATTTCAACTCGAAATTCAACAATGTCTTCTTCCTCCTCCTCAACTCCAAACCCAGCTTCGTCTTAAAAAAAACAGTAACACCATTCGTTGCACTCTAACGAAACAAGGGCAACGATTCCTCACAAAACTCTCAACCACAAACACCAATACCAATACCGAATATCTCATTCGTAAATTCGTACAATCCTCACCCAAATCCGTACTACTCTCCACTCTCACTCACCTCCTCTCTCCGACCACCATTCACCACCACCTCTCTTCTCTCGCCCTCCCCCTCTACATAAGAATAAGCGAATCACAATGGTACACATGGAACCCAACCATCATCGCCGATTTAATCACCCTACTCCACAAACACAAACGCTACACCGAATCCCAGACCTTAATTTCCGAAGCTACTTCAAAACTCAACAACAAAGAACGTGACATTGTTCTCTTCTATGCAAAACTCTTGGACTCACATTCCAAACGCGCTTCTCAAACCGGCTTTGATTTCGCTTATTCTCACCTCAACAACCTTCTTCACACTTCCTCTTCAATTTACGTCAAACGCAGAGCTTATGAATCCATGATTAGTGGATTGTGTGCAATGGATAAGCCTCGTGAGGCTGAGAATCTGGTTCGGGAATTTAAACAAACAGATGGTGGTGGGAAGATTCAGCTTCAACCTTCTGCTTTTGAATTCAAGTCTATTTTGTATGGATATGGAAGATTGGGTTTGTTTCATGATTTGAACAGAGTTGTTGATGAAATGGAGAATAATGGGTTTGTTATTGATACTGTTTGTTATAATATGATTCTTTCAAGTTTTGGAATTCACGAGGAGTATGTGGAAATGGTTTCTTGGCTTACAAGGATGAGGAATTCTGGTGTTCCGTTTTCTGTTAGAACTTATAATTCCGTTTCAAATTCTTGCCCAACGATAATGAGGAATGTTGTGGATTTGAATGATTTGGCATTGTCGATTGAAGAGTTGTTGAATGTGTGTATGGAAGGATGGGAAGCTACGGTGGTTAAGGAGTTGCTATCGTGTAATGTGATTTTCGATGAGGTGATGGTGTGGGATTCTAAAGAGGTGAAATTGGATTTGCATGGATTTCACCTGGGTTCAGCTTATTTGGTTATGTTGCTTTGGTTGGAGGAGATGCAGAAGAGGTTGTTATATGCTTCAAATCATGAGATTCCTGCTGAAATCACTGTGGTCTGTGGGGTTGGAAAGCATAGCAATGTGAGAGGAGAATCGCCGGTCAAAGTATTGCTTAAAGAGATGATGATGAAGATGAAAAGTCCACTCAGGATTGATAGGAAGAACACTGGCTGCTTTGTTGCCAAAGGTAAGGCTGTCAAAATTTGGTTATGTGAATTGAGGAAGCAATGA

Protein sequence

>Msa0044810

MTLRFQLEIQQCLLPPPQLQTQLRLKKNSNTIRCTLTKQGQRFLTKLSTTNTNTNTEYLIRKFVQSSPKSVLLSTLTHLLSPTTIHHHLSSLALPLYIRISESQWYTWNPTIIADLITLLHKHKRYTESQTLISEATSKLNNKERDIVLFYAKLLDSHSKRASQTGFDFAYSHLNNLLHTSSSIYVKRRAYESMISGLCAMDKPREAENLVREFKQTDGGGKIQLQPSAFEFKSILYGYGRLGLFHDLNRVVDEMENNGFVIDTVCYNMILSSFGIHEEYVEMVSWLTRMRNSGVPFSVRTYNSVSNSCPTIMRNVVDLNDLALSIEELLNVCMEGWEATVVKELLSCNVIFDEVMVWDSKEVKLDLHGFHLGSAYLVMLLWLEEMQKRLLYASNHEIPAEITVVCGVGKHSNVRGESPVKVLLKEMMMKMKSPLRIDRKNTGCFVAKGKAVKIWLCELRKQ*