AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1280120


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1280120 MtrunA17_Chr8g0350161 87.568 370 6 3 1 331 1 369 0.0 626
Msa1280120 MtrunA17_Chr7g0266491 38.318 214 125 2 117 330 154 360 1.55e-37 140
Msa1280120 MtrunA17_Chr2g0333241 33.990 203 127 2 128 330 100 295 2.18e-29 117
Msa1280120 MtrunA17_Chr4g0003161 33.990 203 127 2 128 330 100 295 8.27e-29 115
Msa1280120 MtrunA17_Chr4g0073891 33.333 216 124 5 127 330 423 630 4.70e-20 90.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1280120 AT2G45770.1 70.492 366 71 3 1 330 1 365 8.63e-179 499
Msa1280120 AT5G03940.1 40.654 214 120 2 117 330 164 370 5.27e-40 148
Msa1280120 AT1G15310.1 36.453 203 122 3 128 330 100 295 2.48e-31 123
Msa1280120 AT1G48900.2 34.975 203 125 3 128 330 100 295 3.58e-29 116
Msa1280120 AT1G48900.1 34.975 203 125 3 128 330 100 295 1.25e-28 115
Msa1280120 AT5G49500.1 32.195 205 130 3 128 330 100 297 1.02e-24 104
Msa1280120 AT5G49500.2 32.584 178 113 2 153 330 5 175 1.29e-22 97.4
Msa1280120 AT4G30600.2 33.796 216 123 5 127 330 426 633 4.09e-20 91.7
Msa1280120 AT4G30600.1 33.796 216 123 5 127 330 426 633 4.09e-20 91.7

Find 111 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAAGGTGAAAATGATTT+TGG 0.097532 8_3:-18183443 Msa1280120:three_prime_UTR
TACATACCAAAGCCTATTTA+TGG 0.132553 8_3:+18185019 None:intergenic
TTGATGAGCTTCTTCTTTAT+TGG 0.152429 8_3:-18190866 Msa1280120:CDS
CTCTTCCATTAGCCTGTAAT+TGG 0.202802 8_3:+18187092 None:intergenic
GGAGATATTGTTACGAGTTT+TGG 0.215358 8_3:+18190893 None:intergenic
GGACAGGTTGTGGGTGTAAC+TGG 0.259487 8_3:-18185333 Msa1280120:intron
GCAGGAGATCTTACTGGTTC+TGG 0.276643 8_3:-18185938 Msa1280120:intron
AGAGTTAATTTCTTGTAAAA+AGG 0.283124 8_3:-18187073 Msa1280120:CDS
CAGGTTTACACACCAATTAC+AGG 0.291032 8_3:-18187104 Msa1280120:CDS
ACGAAGGTTTCACGAATCTT+AGG 0.309622 8_3:-18183026 Msa1280120:three_prime_UTR
AAGATGAGGAATTGTTGTTT+TGG 0.311595 8_3:+18191062 None:intergenic
AGCACTGAAGAAGAATGTTT+TGG 0.320378 8_3:-18189266 Msa1280120:CDS
ATTTGTACCTGCTGATGCTT+TGG 0.322384 8_3:+18187423 None:intergenic
AATCAGTTATTGACAAATAA+TGG 0.324082 8_3:+18183229 None:intergenic
CTAGTGATCAGCTAGAAATA+TGG 0.333355 8_3:-18187492 Msa1280120:CDS
CTGAACTTCAACTTGGATAT+AGG 0.353693 8_3:-18189216 Msa1280120:intron
AACACCAACTATCATTATTA+CGG 0.358526 8_3:+18189083 None:intergenic
ATGCTTGCAGGAGATCTTAC+TGG 0.362667 8_3:-18185944 Msa1280120:intron
CGAAGCTATTCTTGCTTTGA+AGG 0.363135 8_3:-18183415 Msa1280120:three_prime_UTR
TGTAAACCATAAATAGGCTT+TGG 0.372692 8_3:-18185025 Msa1280120:intron
ATAATGATAGTTGGTGTTAA+TGG 0.374585 8_3:-18189078 Msa1280120:CDS
ATGGGGTTTATTTCCACTCT+TGG 0.377556 8_3:-18183329 Msa1280120:three_prime_UTR
TGCTCCGCCGCCGGTGAAAC+CGG 0.377632 8_3:-18190990 Msa1280120:CDS
CTGGTTCTGGATGGAACTAC+TGG 0.380978 8_3:-18185925 Msa1280120:CDS
TGCTTTGAAGGCAGCTCAGC+TGG 0.387155 8_3:-18183403 Msa1280120:three_prime_UTR
ATTTACTTCATTGAATTCTC+TGG 0.387565 8_3:+18185882 None:intergenic
TGGTGGGAAGACAACATCTT+TGG 0.387855 8_3:-18189055 Msa1280120:CDS
GCTCAAGCACACAGCAGAAA+TGG 0.420264 8_3:-18191126 Msa1280120:exon
GAAATATGGGCTGAAAGGAC+TGG 0.422519 8_3:-18187478 Msa1280120:CDS
TTTGTCTTGGGACAGGTTGT+GGG 0.424495 8_3:-18185342 Msa1280120:intron
ACACACCAATTACAGGCTAA+TGG 0.426484 8_3:-18187097 Msa1280120:CDS
CGGCGGCGGAGCATGTGAAC+CGG 0.436167 8_3:+18191000 None:intergenic
CCTCTGCATCGAAGGGTTGA+AGG 0.441432 8_3:+18185069 None:intergenic
GGGTTTGGTTTGAAATGGGG+AGG 0.443567 8_3:+18191037 None:intergenic
CCTGTAAAATTTGTTGGTGT+TGG 0.450968 8_3:-18185107 Msa1280120:CDS
TCGGACAATTCGACAATGAT+GGG 0.459738 8_3:-18183347 Msa1280120:three_prime_UTR
TAACCCCTTTGCATGGTTTG+TGG 0.460451 8_3:-18183378 Msa1280120:three_prime_UTR
GGAATCCCTGTAAAATTTGT+TGG 0.460807 8_3:-18185113 Msa1280120:CDS
GGTGGGAAGACAACATCTTT+GGG 0.465463 8_3:-18189054 Msa1280120:intron
TGTGAATAAACCGGTTTCAC+CGG 0.465911 8_3:+18190980 None:intergenic
AAAATTCTACCAGATATTGT+TGG 0.466991 8_3:-18187542 Msa1280120:intron
GTGAACCGGGTTCGAGATGA+GGG 0.467454 8_3:+18191014 None:intergenic
GATGTAGAGAAACTCTTCTC+TGG 0.470900 8_3:-18190921 Msa1280120:CDS
ATTGTATTGTGTGATACATC+TGG 0.478907 8_3:-18187215 Msa1280120:CDS
ATGGTTTGTGGTTGGCAGTT+CGG 0.483225 8_3:-18183366 Msa1280120:three_prime_UTR
CCAACCACAAACCATGCAAA+GGG 0.490054 8_3:+18183374 None:intergenic
GGTCAGTGTGGTTGATGAGC+TGG 0.490176 8_3:-18185135 Msa1280120:CDS
GCTGTTGCTAAAGTAGTTGC+TGG 0.491147 8_3:-18187051 Msa1280120:CDS
TTCGGACAATTCGACAATGA+TGG 0.491328 8_3:-18183348 Msa1280120:three_prime_UTR
AGCTAGAAATATGGGCTGAA+AGG 0.492518 8_3:-18187483 Msa1280120:CDS
CCAACTATCATTATTACGGC+TGG 0.492849 8_3:+18189087 None:intergenic
GAATATGAAGAGTGAACATA+TGG 0.494366 8_3:-18183253 Msa1280120:three_prime_UTR
GACAAAGGCCTCTGCATCGA+AGG 0.495480 8_3:+18185061 None:intergenic
GAAGCTTGGCCTCTCAAGAA+TGG 0.496969 8_3:+18183466 None:intergenic
CTTTCTTCAACTTCTCAATG+AGG 0.499357 8_3:-18183189 Msa1280120:three_prime_UTR
TAGTGATCAGCTAGAAATAT+GGG 0.501137 8_3:-18187491 Msa1280120:CDS
CCCTTTGCATGGTTTGTGGT+TGG 0.501969 8_3:-18183374 Msa1280120:three_prime_UTR
ATAGTTGGTGTTAATGGTGG+TGG 0.506081 8_3:-18189072 Msa1280120:CDS
TACCAGATATTGTTGGCAGC+TGG 0.506306 8_3:-18187535 Msa1280120:intron
CTCATTGAGAAGTTGAAGAA+AGG 0.512308 8_3:+18183190 None:intergenic
CGGTTCACATGCTCCGCCGC+CGG 0.521204 8_3:-18190999 Msa1280120:CDS
AAATATGGGCTGAAAGGACT+GGG 0.523298 8_3:-18187477 Msa1280120:CDS
GCTGGTATAACCCCTTTGCA+TGG 0.523771 8_3:-18183385 Msa1280120:three_prime_UTR
GAGAGGCCAAGCTTCGCAAA+AGG 0.540478 8_3:-18183458 Msa1280120:three_prime_UTR
CTGGCTTATAGATTGAAGAA+TGG 0.541325 8_3:-18188776 Msa1280120:CDS
ATTGAAGAATGGAGGTGCTA+AGG 0.542507 8_3:-18188765 Msa1280120:intron
TCATTGAATTCTCTGGCTTG+TGG 0.544319 8_3:+18185889 None:intergenic
TTCAAGTTCGATGCCAAGAG+TGG 0.549926 8_3:+18183316 None:intergenic
CGAATATGCAGAGCAACACT+AGG 0.550173 8_3:-18183520 Msa1280120:three_prime_UTR
GAGAAATCCAAAGCATCAGC+AGG 0.562472 8_3:-18187430 Msa1280120:intron
ACCGGTTTATTCACAAAACT+CGG 0.563026 8_3:-18190972 Msa1280120:CDS
AGTAAAACTGAACTTCAACT+TGG 0.564527 8_3:-18189223 Msa1280120:CDS
AAATTTGTTGGTGTTGGTGA+AGG 0.564716 8_3:-18185101 Msa1280120:CDS
ATGTAAATGAATGATACTAC+AGG 0.565411 8_3:-18183275 Msa1280120:three_prime_UTR
GTCAGTGTGGTTGATGAGCT+GGG 0.566152 8_3:-18185134 Msa1280120:CDS
TGTGAACCGGGTTCGAGATG+AGG 0.574121 8_3:+18191013 None:intergenic
TCATTTAATCCATTCTTGAG+AGG 0.577181 8_3:-18183475 Msa1280120:three_prime_UTR
TTTGGATTTGTTAAGCAACA+AGG 0.578155 8_3:-18189248 Msa1280120:CDS
AAGCTGGATGGTTCTGCAAG+AGG 0.579304 8_3:-18185297 Msa1280120:CDS
GGCGGCGGAGCATGTGAACC+GGG 0.581453 8_3:+18191001 None:intergenic
CCAGCCGTAATAATGATAGT+TGG 0.582690 8_3:-18189087 Msa1280120:CDS
GCCAACCACAAACCATGCAA+AGG 0.584953 8_3:+18183373 None:intergenic
TCTTGCAGAACCATCCAGCT+TGG 0.585467 8_3:+18185299 None:intergenic
GCAGAGCAACACTAGGTCAC+AGG 0.586653 8_3:-18183513 Msa1280120:three_prime_UTR
TAAACCGGTTTCACCGGCGG+CGG 0.586874 8_3:+18190986 None:intergenic
AAGAAGAAGCTCATCAATGA+CGG 0.586886 8_3:+18190872 None:intergenic
CCTTCAACCCTTCGATGCAG+AGG 0.587775 8_3:-18185069 Msa1280120:CDS
AAGGTTTCACGAATCTTAGG+TGG 0.588539 8_3:-18183023 Msa1280120:three_prime_UTR
TTGGATTTGTTAAGCAACAA+GGG 0.588870 8_3:-18189247 Msa1280120:CDS
GAAATGGGGAGGTGAAGATG+AGG 0.589668 8_3:+18191048 None:intergenic
GAACCGGGTTCGAGATGAGG+GGG 0.589872 8_3:+18191016 None:intergenic
GAGATCTTACTGGTTCTGGA+TGG 0.592324 8_3:-18185934 Msa1280120:CDS
AGTTCTTGATGAACTCGAAG+AGG 0.599876 8_3:-18190823 Msa1280120:intron
GTTTATTCACAAAACTCGGC+CGG 0.604090 8_3:-18190968 Msa1280120:CDS
CGGACAATTCGACAATGATG+GGG 0.604758 8_3:-18183346 Msa1280120:three_prime_UTR
GAATAAACCGGTTTCACCGG+CGG 0.608797 8_3:+18190983 None:intergenic
TGGATTTGTTAAGCAACAAG+GGG 0.614912 8_3:-18189246 Msa1280120:CDS
GAGGCGGGTGAATGAAGCAG+AGG 0.615384 8_3:+18191094 None:intergenic
ACAAAGGCCTCTGCATCGAA+GGG 0.616242 8_3:+18185062 None:intergenic
AACCGGGTTCGAGATGAGGG+GGG 0.622086 8_3:+18191017 None:intergenic
TGAACCGGGTTCGAGATGAG+GGG 0.627367 8_3:+18191015 None:intergenic
CTGGATGGTTCTGCAAGAGG+TGG 0.633895 8_3:-18185294 Msa1280120:CDS
TAGTTGGTGTTAATGGTGGT+GGG 0.640615 8_3:-18189071 Msa1280120:CDS
TATTTCTAGCTGATCACTAG+CGG 0.649322 8_3:+18187495 None:intergenic
GCTTATAGATTGAAGAATGG+AGG 0.650080 8_3:-18188773 Msa1280120:CDS
ATGATAGTTGGTGTTAATGG+TGG 0.652803 8_3:-18189075 Msa1280120:CDS
GACTGGGTGTGAGATTGTTG+TGG 0.655858 8_3:-18187461 Msa1280120:CDS
CACGAGAGTATTGCTCACGA+AGG 0.659356 8_3:-18183042 Msa1280120:three_prime_UTR
TTCTGCAAGAGGTGGCTGTG+TGG 0.671813 8_3:-18185286 Msa1280120:intron
CAACCACAAACCATGCAAAG+GGG 0.707004 8_3:+18183375 None:intergenic
TTACTGTTGGCAGGTCAGTG+TGG 0.716550 8_3:-18185147 Msa1280120:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATAATAATATAATAATA+AGG + chr8_3:18186804-18186823 None:intergenic 0.0%
!! TATTATTATATTATTATATA+TGG - chr8_3:18186804-18186823 Msa1280120:intron 0.0%
!! ATTTAAATAATAAATACTAG+TGG - chr8_3:18184249-18184268 Msa1280120:intron 10.0%
!! CTTAGTAAAATAATATAATA+AGG + chr8_3:18184364-18184383 None:intergenic 10.0%
!! TTATAAATATTTGACTATAT+AGG - chr8_3:18184726-18184745 Msa1280120:intron 10.0%
!! TTATATTATTATATATGGTT+TGG - chr8_3:18186809-18186828 Msa1280120:intron 10.0%
!!! TTAATTGTTTTTCTATTTTT+GGG - chr8_3:18188483-18188502 Msa1280120:intron 10.0%
!!! TAATCTCTTAATTTTTTTTT+AGG - chr8_3:18188889-18188908 Msa1280120:intron 10.0%
!!! AATTATTTTTATTTCTATCA+AGG - chr8_3:18188936-18188955 Msa1280120:intron 10.0%
!!! ATTATTTTTATTTCTATCAA+GGG - chr8_3:18188937-18188956 Msa1280120:intron 10.0%
!!! ATGCTTTAAAATAAAAAAAA+GGG + chr8_3:18189536-18189555 None:intergenic 10.0%
!!! TATGCTTTAAAATAAAAAAA+AGG + chr8_3:18189537-18189556 None:intergenic 10.0%
!!! CTTTGTTTATTAATTATTAC+AGG - chr8_3:18183397-18183416 Msa1280120:three_prime_UTR 15.0%
!!! ACAATCTTAATAGTAATTTT+CGG + chr8_3:18183446-18183465 None:intergenic 15.0%
!!! TTTATTGGTAATCATATTAT+AGG + chr8_3:18184184-18184203 None:intergenic 15.0%
!! ATGATTACCAATAAAAATAT+TGG - chr8_3:18184189-18184208 Msa1280120:intron 15.0%
!! CTATATAGGATATTTATTTA+TGG - chr8_3:18184740-18184759 Msa1280120:intron 15.0%
!!! TTCAATTTTTATGATATGAA+TGG - chr8_3:18184828-18184847 Msa1280120:intron 15.0%
!! TTGAATTAAATTTCATTTAC+AGG - chr8_3:18185012-18185031 Msa1280120:intron 15.0%
!!! ATTGTTGATTCTATTATTTA+TGG - chr8_3:18185109-18185128 Msa1280120:CDS 15.0%
!! TAACGTATATTATGTAATTA+AGG - chr8_3:18185544-18185563 Msa1280120:intron 15.0%
!! ATAAAAAGACAAACAATAAA+TGG - chr8_3:18185981-18186000 Msa1280120:intron 15.0%
!! TATTGTATATAATAAATGCA+TGG + chr8_3:18186205-18186224 None:intergenic 15.0%
!! AAAACTTATAAAGTGATAAA+CGG + chr8_3:18186753-18186772 None:intergenic 15.0%
!!! TCTAAAATTGTATGAATTAA+CGG - chr8_3:18188151-18188170 Msa1280120:intron 15.0%
!! CAAAAATAGAAAAACAATTA+AGG + chr8_3:18188484-18188503 None:intergenic 15.0%
!!! CTTAATTGTTTTTCTATTTT+TGG - chr8_3:18188482-18188501 Msa1280120:intron 15.0%
!! AAAAAATTAAGAGATTATTG+AGG + chr8_3:18188886-18188905 None:intergenic 15.0%
!! AATACAACACAATAAATAAA+AGG + chr8_3:18189330-18189349 None:intergenic 15.0%
!!! ATTTGAGTAAATAATCATTT+TGG + chr8_3:18189950-18189969 None:intergenic 15.0%
!!! TTTACTCAAATAATTTGTTA+TGG - chr8_3:18189959-18189978 Msa1280120:intron 15.0%
!!! TAGTAATAAAGTATTTAGAT+TGG - chr8_3:18190141-18190160 Msa1280120:intron 15.0%
!!! AAGTATAGTTTAAAATAAGA+GGG - chr8_3:18190285-18190304 Msa1280120:intron 15.0%
!!! CTAAAATCTAAAACAAAAAA+TGG - chr8_3:18190449-18190468 Msa1280120:intron 15.0%
!! TGAAAAAAATACTAATAGCT+TGG + chr8_3:18183354-18183373 None:intergenic 20.0%
!! GAAAATTACTATTAAGATTG+TGG - chr8_3:18183445-18183464 Msa1280120:three_prime_UTR 20.0%
!!! AATTAGTTTTTTTACACAGA+CGG - chr8_3:18183543-18183562 Msa1280120:three_prime_UTR 20.0%
!!! TTTTATGAACTTACCTATAA+AGG - chr8_3:18183629-18183648 Msa1280120:intron 20.0%
!! TGTAAAATTTCTTAAATGCA+TGG + chr8_3:18183751-18183770 None:intergenic 20.0%
!!! TGCATTTAAGAAATTTTACA+TGG - chr8_3:18183751-18183770 Msa1280120:intron 20.0%
!! TAATCATATTATAGGTATGA+AGG + chr8_3:18184176-18184195 None:intergenic 20.0%
!!! TGCTTAACCAATATTTTTAT+TGG + chr8_3:18184199-18184218 None:intergenic 20.0%
!! AATAAAAGGATTACTTTCAA+AGG + chr8_3:18184232-18184251 None:intergenic 20.0%
!!! AAATTATTTTGTTTTAGCCA+AGG - chr8_3:18184420-18184439 Msa1280120:intron 20.0%
!! AATATTTATAAAATGCAGGA+TGG + chr8_3:18184717-18184736 None:intergenic 20.0%
!! GTCAAATATTTATAAAATGC+AGG + chr8_3:18184721-18184740 None:intergenic 20.0%
!!! TTATTTATGGTTTTAAGTCT+TGG - chr8_3:18184753-18184772 Msa1280120:intron 20.0%
!!! TTTATGATATGAATGGTTTT+AGG - chr8_3:18184835-18184854 Msa1280120:intron 20.0%
!! GAACAAACAAAAATGTTTAA+AGG - chr8_3:18185209-18185228 Msa1280120:intron 20.0%
!! AGTTAATAGATAATTGTCAA+AGG - chr8_3:18185248-18185267 Msa1280120:intron 20.0%
!! TTCTATATTGTTAATTGCTT+GGG + chr8_3:18185285-18185304 None:intergenic 20.0%
!! TTTCTATATTGTTAATTGCT+TGG + chr8_3:18185286-18185305 None:intergenic 20.0%
!! ATAAAAGATATCCAATAATG+AGG + chr8_3:18185780-18185799 None:intergenic 20.0%
!!! TAGCTATTTCTTGTAAATTT+AGG - chr8_3:18185837-18185856 Msa1280120:intron 20.0%
!! TAAAAATATCTTTAGATCCT+TGG - chr8_3:18185863-18185882 Msa1280120:intron 20.0%
!!! AATTTTAATGTTTGTGTTGA+GGG + chr8_3:18186382-18186401 None:intergenic 20.0%
!!! AAGATCATATCATATTTTCT+TGG - chr8_3:18186498-18186517 Msa1280120:intron 20.0%
!!! CTATTTTGAACTTTAATACT+TGG - chr8_3:18186960-18186979 Msa1280120:intron 20.0%
!! AGAGTTAATTTCTTGTAAAA+AGG - chr8_3:18187052-18187071 Msa1280120:CDS 20.0%
!!! AACAAAAAAAGTCTTTAAAG+AGG + chr8_3:18187218-18187237 None:intergenic 20.0%
!!! TTATGTTGTTATCTTCTTTT+TGG - chr8_3:18187257-18187276 Msa1280120:CDS 20.0%
!! ATGAACAATTATTATGTGAT+GGG - chr8_3:18187330-18187349 Msa1280120:intron 20.0%
!!! TTTTTATTCTTCAAACAAAG+CGG - chr8_3:18187441-18187460 Msa1280120:CDS 20.0%
!!! ACACAATCTTTTTTTTAATG+AGG - chr8_3:18187593-18187612 Msa1280120:intron 20.0%
!!! TGCATTGATTAATAGATAAA+TGG + chr8_3:18187736-18187755 None:intergenic 20.0%
!! AATATACAAAAAAGATGCTA+GGG + chr8_3:18187976-18187995 None:intergenic 20.0%
!! AAATATACAAAAAAGATGCT+AGG + chr8_3:18187977-18187996 None:intergenic 20.0%
!! AGTACAATTTCATATTTGAT+AGG - chr8_3:18187998-18188017 Msa1280120:intron 20.0%
!! AAAATAACAAATTTCCCAAT+AGG + chr8_3:18188306-18188325 None:intergenic 20.0%
!!! AAGCTAAAGATCTAAATTTT+CGG - chr8_3:18188415-18188434 Msa1280120:intron 20.0%
!! AAATAGAAAAACAATTAAGG+CGG + chr8_3:18188481-18188500 None:intergenic 20.0%
!! TATTTCGATATTTGGTATTA+CGG - chr8_3:18188708-18188727 Msa1280120:intron 20.0%
!! ATTTATGGTTTACAGAAAAA+TGG + chr8_3:18189094-18189113 None:intergenic 20.0%
!!! TTTTTCTGTAAACCATAAAT+AGG - chr8_3:18189094-18189113 Msa1280120:CDS 20.0%
!! ATCATATATTGAATAGTGAA+GGG + chr8_3:18189214-18189233 None:intergenic 20.0%
!! AATCATATATTGAATAGTGA+AGG + chr8_3:18189215-18189234 None:intergenic 20.0%
!! CACTATTCAATATATGATTA+CGG - chr8_3:18189216-18189235 Msa1280120:intron 20.0%
!! TTTAAACTTCATTAAGAGAA+GGG + chr8_3:18189500-18189519 None:intergenic 20.0%
!! ATTTAAACTTCATTAAGAGA+AGG + chr8_3:18189501-18189520 None:intergenic 20.0%
!! TAACAATATTCCTTTCTTAA+AGG + chr8_3:18189569-18189588 None:intergenic 20.0%
!!! TTTTAGTCATTGAAATTGTA+AGG - chr8_3:18189632-18189651 Msa1280120:intron 20.0%
!! TTTAGTCATTGAAATTGTAA+GGG - chr8_3:18189633-18189652 Msa1280120:intron 20.0%
!!! AAATTGCTATTTCGTAAATT+TGG + chr8_3:18189676-18189695 None:intergenic 20.0%
!!! GATTGACATTCTTTAATTTA+AGG - chr8_3:18189863-18189882 Msa1280120:intron 20.0%
!!! TTGTTGTTTTGTATATTTGA+GGG - chr8_3:18189892-18189911 Msa1280120:intron 20.0%
!!! ATAAACAAAACTTTTAGCAA+GGG + chr8_3:18190235-18190254 None:intergenic 20.0%
!!! TATAAACAAAACTTTTAGCA+AGG + chr8_3:18190236-18190255 None:intergenic 20.0%
!!! GAAGTATAGTTTAAAATAAG+AGG - chr8_3:18190284-18190303 Msa1280120:intron 20.0%
!!! AAAATGGATAATCACATTTT+TGG - chr8_3:18190465-18190484 Msa1280120:intron 20.0%
!!! AAATGGATAATCACATTTTT+GGG - chr8_3:18190466-18190485 Msa1280120:intron 20.0%
!! AATCTACTCTTACTATTATT+TGG - chr8_3:18190542-18190561 Msa1280120:intron 20.0%
!! AATCAGTTATTGACAAATAA+TGG + chr8_3:18190899-18190918 None:intergenic 20.0%
!!! TTGCTTTTTCTTTTAGTAAC+CGG + chr8_3:18183179-18183198 None:intergenic 25.0%
!!! GCTTTATTAGTTTCTGATTT+TGG - chr8_3:18183419-18183438 Msa1280120:three_prime_UTR 25.0%
!! ACCAAGTAGTAGATATTTTT+AGG - chr8_3:18183602-18183621 Msa1280120:intron 25.0%
!!! CCAAGTAGTAGATATTTTTA+GGG - chr8_3:18183603-18183622 Msa1280120:intron 25.0%
!!! ATTTCACTTTTGTACCATTA+AGG - chr8_3:18183814-18183833 Msa1280120:intron 25.0%
! ATATAACATTGGTACCTTAA+TGG + chr8_3:18183831-18183850 None:intergenic 25.0%
! TATAAAGTAACATCGCTAAT+TGG + chr8_3:18183876-18183895 None:intergenic 25.0%
! ATGAAGAAAATTTGATAGAG+AGG - chr8_3:18184100-18184119 Msa1280120:intron 25.0%
! TTTCTAACATTATCATGTTG+TGG + chr8_3:18184474-18184493 None:intergenic 25.0%
! TTCCTATTTGATAAATGCAA+GGG + chr8_3:18184807-18184826 None:intergenic 25.0%
! ATTCCTATTTGATAAATGCA+AGG + chr8_3:18184808-18184827 None:intergenic 25.0%
! AACACCAACTATCATTATTA+CGG + chr8_3:18185045-18185064 None:intergenic 25.0%
!!! ATAATGATAGTTGGTGTTAA+TGG - chr8_3:18185047-18185066 Msa1280120:CDS 25.0%
! ATTCTATTATTTATGGAGCA+AGG - chr8_3:18185116-18185135 Msa1280120:CDS 25.0%
! AACTTAAAGAAAATCTATCC+AGG + chr8_3:18185186-18185205 None:intergenic 25.0%
!!! TTATCAAATCAGTTTGGTTT+TGG + chr8_3:18185310-18185329 None:intergenic 25.0%
! AAAAGCTTATCAAATCAGTT+TGG + chr8_3:18185316-18185335 None:intergenic 25.0%
!! TTATACTGTGAGTTTTTCTT+TGG - chr8_3:18185388-18185407 Msa1280120:intron 25.0%
! TAGATTACTTTATACCTAAC+AGG + chr8_3:18185598-18185617 None:intergenic 25.0%
! AGGTATAAAGTAATCTACTT+AGG - chr8_3:18185601-18185620 Msa1280120:intron 25.0%
! TATACTCAAATGAGAAAAGA+GGG - chr8_3:18185895-18185914 Msa1280120:CDS 25.0%
!!! CAAACAATAAATGGTTTTAC+AGG - chr8_3:18185990-18186009 Msa1280120:intron 25.0%
!!! AAATGGTTTTACAGGAAAAT+TGG - chr8_3:18185998-18186017 Msa1280120:intron 25.0%
!!! CAATTTTAATGTTTGTGTTG+AGG + chr8_3:18186383-18186402 None:intergenic 25.0%
! AGTATAAAACTTATACACTG+GGG + chr8_3:18186407-18186426 None:intergenic 25.0%
! CAGTATAAAACTTATACACT+GGG + chr8_3:18186408-18186427 None:intergenic 25.0%
! ACAGTATAAAACTTATACAC+TGG + chr8_3:18186409-18186428 None:intergenic 25.0%
! AAAATTCTACCAGATATTGT+TGG - chr8_3:18186583-18186602 Msa1280120:intron 25.0%
!! ACGTAAGTACTAAACTTTTA+CGG - chr8_3:18186933-18186952 Msa1280120:intron 25.0%
! ACAAGAAAATTATGATGTAC+AGG + chr8_3:18187181-18187200 None:intergenic 25.0%
! AGAAGATAACAACATAACTT+AGG + chr8_3:18187254-18187273 None:intergenic 25.0%
!!! TTATCTTCTTTTTGGTTTTC+TGG - chr8_3:18187265-18187284 Msa1280120:intron 25.0%
!! TAAGGTTTTTGACATTTATG+TGG - chr8_3:18187301-18187320 Msa1280120:intron 25.0%
! GATGAACAATTATTATGTGA+TGG - chr8_3:18187329-18187348 Msa1280120:intron 25.0%
! TGAACAATTATTATGTGATG+GGG - chr8_3:18187331-18187350 Msa1280120:intron 25.0%
!! TTTTATTCTTCAAACAAAGC+GGG - chr8_3:18187442-18187461 Msa1280120:CDS 25.0%
! TATATCTTCAAACATGACAT+TGG - chr8_3:18187470-18187489 Msa1280120:CDS 25.0%
!! ATATAAGTTCCCAATTTTGA+AGG + chr8_3:18187502-18187521 None:intergenic 25.0%
! AATGAAACAAATGACATCTA+TGG + chr8_3:18187856-18187875 None:intergenic 25.0%
! ATTTACTTCATTGAATTCTC+TGG + chr8_3:18188246-18188265 None:intergenic 25.0%
! GCATAATATTATTTCAGTAG+AGG - chr8_3:18188505-18188524 Msa1280120:intron 25.0%
!! ATAACACTCACTCTTTTATT+GGG + chr8_3:18188651-18188670 None:intergenic 25.0%
!! TATAACACTCACTCTTTTAT+TGG + chr8_3:18188652-18188671 None:intergenic 25.0%
!!! ATGAAGTTTCTTTTTTGTCT+TGG - chr8_3:18188770-18188789 Msa1280120:CDS 25.0%
!!! TGAAGTTTCTTTTTTGTCTT+GGG - chr8_3:18188771-18188790 Msa1280120:CDS 25.0%
!!! TTTTATTTCTATCAAGGGTA+AGG - chr8_3:18188942-18188961 Msa1280120:intron 25.0%
! AATAAGATGCTAATTACTGT+TGG - chr8_3:18188965-18188984 Msa1280120:intron 25.0%
! AAGATATAACCATACTCTTT+CGG - chr8_3:18189244-18189263 Msa1280120:CDS 25.0%
! ATTTATTGTGTTGTATTGCT+AGG - chr8_3:18189333-18189352 Msa1280120:intron 25.0%
! AATGAAGTTTAAATTTACGC+TGG - chr8_3:18189507-18189526 Msa1280120:intron 25.0%
!! ATTTAGCACAACAATTTTAC+TGG - chr8_3:18189731-18189750 Msa1280120:intron 25.0%
!! TGTTTACTAAAGAGACATTT+TGG - chr8_3:18189825-18189844 Msa1280120:intron 25.0%
!!! GTTGTTGTTTTGTATATTTG+AGG - chr8_3:18189891-18189910 Msa1280120:intron 25.0%
! ACTAAGTTTAAGAACTTCAA+AGG + chr8_3:18190125-18190144 None:intergenic 25.0%
! AAACTACACTTTCTTTATCT+GGG + chr8_3:18190426-18190445 None:intergenic 25.0%
! TAAACTACACTTTCTTTATC+TGG + chr8_3:18190427-18190446 None:intergenic 25.0%
!! TTACTATTATTTGGTTTACC+AGG - chr8_3:18190551-18190570 Msa1280120:intron 25.0%
!! CAAAAGGTGAAAATGATTTT+GGG - chr8_3:18190683-18190702 Msa1280120:intron 25.0%
!! AAAAGGTGAAAATGATTTTG+GGG - chr8_3:18190684-18190703 Msa1280120:intron 25.0%
! ATGTAAATGAATGATACTAC+AGG - chr8_3:18190850-18190869 Msa1280120:CDS 25.0%
!!! TTTTTGACTTTTTGTCATCT+CGG - chr8_3:18190974-18190993 Msa1280120:CDS 25.0%
! AATTACAGTATATACTGACA+AGG - chr8_3:18191046-18191065 Msa1280120:CDS 25.0%
! ATTACAGTATATACTGACAA+GGG - chr8_3:18191047-18191066 Msa1280120:CDS 25.0%
!!! TCTTCTTTCTTTTAGTTCAG+TGG - chr8_3:18182966-18182985 Msa1280120:three_prime_UTR 30.0%
!!! AAGATGAGGAATTGTTGTTT+TGG + chr8_3:18183066-18183085 None:intergenic 30.0%
TTGATGAGCTTCTTCTTTAT+TGG - chr8_3:18183259-18183278 Msa1280120:three_prime_UTR 30.0%
ATTGAATAAGAGGAACGAAA+AGG + chr8_3:18183330-18183349 None:intergenic 30.0%
ATAGCTTGGAATTGAATAAG+AGG + chr8_3:18183340-18183359 None:intergenic 30.0%
TTAAGAGAGGATATTCTTTC+TGG - chr8_3:18183473-18183492 Msa1280120:three_prime_UTR 30.0%
TAAGAGAGGATATTCTTTCT+GGG - chr8_3:18183474-18183493 Msa1280120:three_prime_UTR 30.0%
TAAATCAGGGAGTGAAATAA+AGG - chr8_3:18183502-18183521 Msa1280120:three_prime_UTR 30.0%
CCCTAAAAATATCTACTACT+TGG + chr8_3:18183606-18183625 None:intergenic 30.0%
GTACCAATGTTATATACCAT+TGG - chr8_3:18183836-18183855 Msa1280120:intron 30.0%
TACACAAAAACTCAAGTGAT+TGG + chr8_3:18184081-18184100 None:intergenic 30.0%
! ATGGATACCGAAAAATGTTT+TGG - chr8_3:18184292-18184311 Msa1280120:intron 30.0%
!!! TATGGTTTTAAGTCTTGGTA+TGG - chr8_3:18184758-18184777 Msa1280120:intron 30.0%
!! TTTGGATTTGTTAAGCAACA+AGG - chr8_3:18184877-18184896 Msa1280120:intron 30.0%
!! TTGGATTTGTTAAGCAACAA+GGG - chr8_3:18184878-18184897 Msa1280120:intron 30.0%
AGTAAAACTGAACTTCAACT+TGG - chr8_3:18184902-18184921 Msa1280120:intron 30.0%
AAAATCTATCCAGGTACATA+AGG + chr8_3:18185177-18185196 None:intergenic 30.0%
TATATTGTTAATTGCTTGGG+AGG + chr8_3:18185282-18185301 None:intergenic 30.0%
ATCTAGATTGTTAAACTAGC+TGG - chr8_3:18185487-18185506 Msa1280120:intron 30.0%
!!! CAACTTTTGGCTTTAGTTTA+GGG - chr8_3:18185691-18185710 Msa1280120:intron 30.0%
AACATCGTTAAAACAACAGT+TGG + chr8_3:18185722-18185741 None:intergenic 30.0%
! TTTTATGACTCTACTTGTAG+AGG - chr8_3:18185794-18185813 Msa1280120:intron 30.0%
! AGAGGATATTTTGTCTCATT+TGG - chr8_3:18185812-18185831 Msa1280120:intron 30.0%
CTATACTCAAATGAGAAAAG+AGG - chr8_3:18185894-18185913 Msa1280120:CDS 30.0%
! CGAACTGTTTAAAATGAGTT+AGG - chr8_3:18186177-18186196 Msa1280120:intron 30.0%
TTGTATCATATCTTGCAAAC+AGG - chr8_3:18186228-18186247 Msa1280120:intron 30.0%
TGTATCATATCTTGCAAACA+GGG - chr8_3:18186229-18186248 Msa1280120:intron 30.0%
TTTGTGTAGTTCAAAACACA+CGG - chr8_3:18186308-18186327 Msa1280120:intron 30.0%
! GGATATGAGAAAGAATTTTG+AGG + chr8_3:18186455-18186474 None:intergenic 30.0%
TTCTTTCTCATATCCAATTG+AGG - chr8_3:18186460-18186479 Msa1280120:intron 30.0%
ATACTAAAAATCGCCTCAAT+TGG + chr8_3:18186476-18186495 None:intergenic 30.0%
!!! CTTATTTTTGTGTCACATGT+TGG - chr8_3:18186525-18186544 Msa1280120:intron 30.0%
! CAATATCTGGTAGAATTTTG+AGG + chr8_3:18186582-18186601 None:intergenic 30.0%
TAGTGATCAGCTAGAAATAT+GGG - chr8_3:18186634-18186653 Msa1280120:intron 30.0%
ATTGTATTGTGTGATACATC+TGG - chr8_3:18186910-18186929 Msa1280120:intron 30.0%
TTTGAACTTTAATACTTGGC+AGG - chr8_3:18186964-18186983 Msa1280120:intron 30.0%
GGTGTTTATGTTATATTCTC+AGG - chr8_3:18187002-18187021 Msa1280120:intron 30.0%
!! TCTGGAAATTTTGAGTAGTA+AGG - chr8_3:18187283-18187302 Msa1280120:intron 30.0%
CTTATATCTTAACTCCATGT+AGG - chr8_3:18187515-18187534 Msa1280120:CDS 30.0%
! TCTTGTGAATTTTACAGCAA+TGG - chr8_3:18187546-18187565 Msa1280120:intron 30.0%
TTAGAACTAGCTGAAATTCT+AGG - chr8_3:18187617-18187636 Msa1280120:intron 30.0%
!!! TGTGTTTTAAGAGTATGTGA+TGG - chr8_3:18188070-18188089 Msa1280120:intron 30.0%
AGAGATAAAAAAGATGCTCA+GGG + chr8_3:18188107-18188126 None:intergenic 30.0%
CAATAGGAAGAAGATAAACT+CGG + chr8_3:18188290-18188309 None:intergenic 30.0%
GAGTTTATCTTCTTCCTATT+GGG - chr8_3:18188289-18188308 Msa1280120:intron 30.0%
CACCATATGAAAATACCATT+TGG - chr8_3:18188353-18188372 Msa1280120:intron 30.0%
! TGCCAAATGGTATTTTCATA+TGG + chr8_3:18188358-18188377 None:intergenic 30.0%
! AACTCTCTCTACTCTTTTAT+CGG - chr8_3:18188553-18188572 Msa1280120:intron 30.0%
TTATTGGGTGAAATCAATGT+GGG + chr8_3:18188636-18188655 None:intergenic 30.0%
TTTATTGGGTGAAATCAATG+TGG + chr8_3:18188637-18188656 None:intergenic 30.0%
CTCTTCTCTATTTCGATATT+TGG - chr8_3:18188700-18188719 Msa1280120:intron 30.0%
AAAGCTAATATGAAACTGCA+AGG + chr8_3:18188737-18188756 None:intergenic 30.0%
! CAACACCAACAAATTTTACA+GGG + chr8_3:18189020-18189039 None:intergenic 30.0%
TGTAAACCATAAATAGGCTT+TGG - chr8_3:18189100-18189119 Msa1280120:intron 30.0%
TACATACCAAAGCCTATTTA+TGG + chr8_3:18189109-18189128 None:intergenic 30.0%
AATTCAGACTTCAATGTGAA+AGG + chr8_3:18189155-18189174 None:intergenic 30.0%
!! TTGCTATTTGACAACTTATC+TGG - chr8_3:18189303-18189322 Msa1280120:intron 30.0%
TCATTGAAATTGTAAGGGAT+TGG - chr8_3:18189638-18189657 Msa1280120:intron 30.0%
TCAATATGCAAGTCTTTGAT+AGG - chr8_3:18189792-18189811 Msa1280120:intron 30.0%
GATTGACAGTTACAATTTCA+AGG - chr8_3:18189923-18189942 Msa1280120:intron 30.0%
TGAATGCATACTGTCTATTA+TGG - chr8_3:18190027-18190046 Msa1280120:intron 30.0%
GAATGCATACTGTCTATTAT+GGG - chr8_3:18190028-18190047 Msa1280120:intron 30.0%
ATTAAAAATGTCCTAGAGAG+AGG - chr8_3:18190175-18190194 Msa1280120:intron 30.0%
AACACAGAGATCAATTTAAG+AGG + chr8_3:18190336-18190355 None:intergenic 30.0%
!!! TTCCTCATTATTTTGGTGTT+AGG + chr8_3:18190380-18190399 None:intergenic 30.0%
! TTGCACTTTCCTCATTATTT+TGG + chr8_3:18190387-18190406 None:intergenic 30.0%
AATCAAGGTTAAGATACTTC+TGG + chr8_3:18190495-18190514 None:intergenic 30.0%
! ATTTTTCCTTCGTTGTACAT+TGG - chr8_3:18190512-18190531 Msa1280120:intron 30.0%
TCATTTAATCCATTCTTGAG+AGG - chr8_3:18190650-18190669 Msa1280120:intron 30.0%
! GCAAAAGGTGAAAATGATTT+TGG - chr8_3:18190682-18190701 Msa1280120:intron 30.0%
! AAAGGTGAAAATGATTTTGG+GGG - chr8_3:18190685-18190704 Msa1280120:intron 30.0%
GAATATGAAGAGTGAACATA+TGG - chr8_3:18190872-18190891 Msa1280120:CDS 30.0%
!!! TTTTGACTTTTTGTCATCTC+GGG - chr8_3:18190975-18190994 Msa1280120:CDS 30.0%
!!! GAATTGTTGTTTTGGAGGAA+TGG + chr8_3:18183058-18183077 None:intergenic 35.0%
!!! ATGAGGAATTGTTGTTTTGG+AGG + chr8_3:18183063-18183082 None:intergenic 35.0%
! ACCGGTTTATTCACAAAACT+CGG - chr8_3:18183153-18183172 Msa1280120:three_prime_UTR 35.0%
! GGAGATATTGTTACGAGTTT+TGG + chr8_3:18183235-18183254 None:intergenic 35.0%
AAGAAGAAGCTCATCAATGA+CGG + chr8_3:18183256-18183275 None:intergenic 35.0%
GATTGTGGAGAATTTAAGAG+AGG - chr8_3:18183460-18183479 Msa1280120:three_prime_UTR 35.0%
! TTTCTGGGAAGCTTAAATCA+GGG - chr8_3:18183489-18183508 Msa1280120:three_prime_UTR 35.0%
ACCTATAAAGGTAGCATCTT+CGG - chr8_3:18183641-18183660 Msa1280120:intron 35.0%
TGGCCAATGGTATATAACAT+TGG + chr8_3:18183842-18183861 None:intergenic 35.0%
GGCAATGGTATATACCATTA+TGG - chr8_3:18183953-18183972 Msa1280120:intron 35.0%
ATAGCACTTGTGTACCATAA+TGG + chr8_3:18183970-18183989 None:intergenic 35.0%
AAGGTGACTAATCTCAATCA+GGG + chr8_3:18184157-18184176 None:intergenic 35.0%
! TTCTCGGCCAAAACATTTTT+CGG + chr8_3:18184302-18184321 None:intergenic 35.0%
!! TCTTCTAAGGAGTTGTTTCT+CGG + chr8_3:18184318-18184337 None:intergenic 35.0%
ATCAACACATGTGTCTTCTA+AGG + chr8_3:18184331-18184350 None:intergenic 35.0%
!!! TTTGTTTTAGCCAAGGAGTT+TGG - chr8_3:18184427-18184446 Msa1280120:intron 35.0%
ACCACTAAGGATTGTATTGA+CGG + chr8_3:18184531-18184550 None:intergenic 35.0%
GTCCCTTGCATTTATCAAAT+AGG - chr8_3:18184802-18184821 Msa1280120:intron 35.0%
!! AGCACTGAAGAAGAATGTTT+TGG - chr8_3:18184859-18184878 Msa1280120:intron 35.0%
!! TGGATTTGTTAAGCAACAAG+GGG - chr8_3:18184879-18184898 Msa1280120:intron 35.0%
CTGAACTTCAACTTGGATAT+AGG - chr8_3:18184909-18184928 Msa1280120:intron 35.0%
!! ATGATAGTTGGTGTTAATGG+TGG - chr8_3:18185050-18185069 Msa1280120:CDS 35.0%
! TTTGATAAGCTTTTCCTTGC+AGG - chr8_3:18185322-18185341 Msa1280120:CDS 35.0%
CTGGCTTATAGATTGAAGAA+TGG - chr8_3:18185349-18185368 Msa1280120:intron 35.0%
GCTTATAGATTGAAGAATGG+AGG - chr8_3:18185352-18185371 Msa1280120:intron 35.0%
ATCTACACCAAAAAGTTCGA+TGG - chr8_3:18185424-18185443 Msa1280120:intron 35.0%
! GATATCACCATCGAACTTTT+TGG + chr8_3:18185434-18185453 None:intergenic 35.0%
TTTCCTTCTCAGCTTTCAAA+AGG - chr8_3:18185511-18185530 Msa1280120:intron 35.0%
TTGCAATCTGACCATTAATC+AGG - chr8_3:18185572-18185591 Msa1280120:intron 35.0%
AATTATCTCCCATTTCTACC+TGG - chr8_3:18185659-18185678 Msa1280120:intron 35.0%
!!! GCAACTTTTGGCTTTAGTTT+AGG - chr8_3:18185690-18185709 Msa1280120:intron 35.0%
AGATATCCAATAATGAGGCA+GGG + chr8_3:18185775-18185794 None:intergenic 35.0%
AAGATATCCAATAATGAGGC+AGG + chr8_3:18185776-18185795 None:intergenic 35.0%
ATGAGAAAAGAGGGTCAAAT+AGG - chr8_3:18185904-18185923 Msa1280120:CDS 35.0%
!! AGGAGAGTATCCAATCAAAA+TGG - chr8_3:18185924-18185943 Msa1280120:CDS 35.0%
!! GGAGAGTATCCAATCAAAAT+GGG - chr8_3:18185925-18185944 Msa1280120:CDS 35.0%
TCAAAGATGCAACAGAGATT+TGG + chr8_3:18186106-18186125 None:intergenic 35.0%
AATCTCTGTTGCATCTTTGA+AGG - chr8_3:18186106-18186125 Msa1280120:intron 35.0%
!! GTGTGTTTTGAACTACACAA+AGG + chr8_3:18186309-18186328 None:intergenic 35.0%
!! TATTTCTAGCTGATCACTAG+CGG + chr8_3:18186633-18186652 None:intergenic 35.0%
CTAGTGATCAGCTAGAAATA+TGG - chr8_3:18186633-18186652 Msa1280120:intron 35.0%
CTTTCACAAGCTGTAAAAAG+AGG - chr8_3:18186868-18186887 Msa1280120:intron 35.0%
GTAAAAAGAGGAAAAGAGCT+AGG - chr8_3:18186880-18186899 Msa1280120:intron 35.0%
GGCAGGTTGTATATTAGTAT+TGG - chr8_3:18186981-18187000 Msa1280120:intron 35.0%
! GACTAAGTTGAGAGGAAAAA+GGG + chr8_3:18187124-18187143 None:intergenic 35.0%
! TGACTAAGTTGAGAGGAAAA+AGG + chr8_3:18187125-18187144 None:intergenic 35.0%
! AGAAAGATGACTAAGTTGAG+AGG + chr8_3:18187132-18187151 None:intergenic 35.0%
! AAAAGTCTTTAAAGAGGCAG+TGG + chr8_3:18187212-18187231 None:intergenic 35.0%
TTGGTTAGCACCTTCAAAAT+TGG - chr8_3:18187489-18187508 Msa1280120:CDS 35.0%
TGGTTAGCACCTTCAAAATT+GGG - chr8_3:18187490-18187509 Msa1280120:CDS 35.0%
ACAAGACATGAAAACCTACA+TGG + chr8_3:18187532-18187551 None:intergenic 35.0%
TGGTTCAGCGAACTTTATTA+TGG - chr8_3:18187912-18187931 Msa1280120:intron 35.0%
TACATCAACAAGCCTACTTA+CGG + chr8_3:18188050-18188069 None:intergenic 35.0%
GAGAGATAAAAAAGATGCTC+AGG + chr8_3:18188108-18188127 None:intergenic 35.0%
CGAGTTTATCTTCTTCCTAT+TGG - chr8_3:18188288-18188307 Msa1280120:intron 35.0%
GAAGAAATGTGAATGCCAAA+TGG + chr8_3:18188371-18188390 None:intergenic 35.0%
TGGCATTCACATTTCTTCTT+TGG - chr8_3:18188373-18188392 Msa1280120:intron 35.0%
GGCATTCACATTTCTTCTTT+GGG - chr8_3:18188374-18188393 Msa1280120:intron 35.0%
! ACTCTCTCTACTCTTTTATC+GGG - chr8_3:18188554-18188573 Msa1280120:intron 35.0%
TTATCGGGCAAAATCCATAT+TGG - chr8_3:18188569-18188588 Msa1280120:intron 35.0%
!!! TTTCTTTTTTGTCTTGGGAC+AGG - chr8_3:18188776-18188795 Msa1280120:CDS 35.0%
!! TGGTTTAATTTTGACCAAGC+TGG - chr8_3:18188812-18188831 Msa1280120:intron 35.0%
!! TTAATTTTGACCAAGCTGGA+TGG - chr8_3:18188816-18188835 Msa1280120:intron 35.0%
GGAATCCCTGTAAAATTTGT+TGG - chr8_3:18189012-18189031 Msa1280120:intron 35.0%
! CCAACACCAACAAATTTTAC+AGG + chr8_3:18189021-18189040 None:intergenic 35.0%
!! CCTGTAAAATTTGTTGGTGT+TGG - chr8_3:18189018-18189037 Msa1280120:intron 35.0%
!! AAATTTGTTGGTGTTGGTGA+AGG - chr8_3:18189024-18189043 Msa1280120:intron 35.0%
!! CAGAAAAATGGCATTGACAA+AGG + chr8_3:18189082-18189101 None:intergenic 35.0%
ATAGGAAAGATCGTATGACT+GGG + chr8_3:18189189-18189208 None:intergenic 35.0%
ATTGAATAGTGAAGGGTGAT+AGG + chr8_3:18189207-18189226 None:intergenic 35.0%
GTGTAAATTCCGAAAGAGTA+TGG + chr8_3:18189256-18189275 None:intergenic 35.0%
CCTAGAGTTAAGTATGATTG+GGG + chr8_3:18189278-18189297 None:intergenic 35.0%
CCCTAGAGTTAAGTATGATT+GGG + chr8_3:18189279-18189298 None:intergenic 35.0%
CCCAATCATACTTAACTCTA+GGG - chr8_3:18189276-18189295 Msa1280120:intron 35.0%
CCAATCATACTTAACTCTAG+GGG - chr8_3:18189277-18189296 Msa1280120:intron 35.0%
! ACACACTCATCCTTTAAGAA+AGG - chr8_3:18189556-18189575 Msa1280120:intron 35.0%
TGAAAGTGAACAGCAAACTT+AGG - chr8_3:18190056-18190075 Msa1280120:intron 35.0%
ACAAAACTTTACCTCTCTCT+AGG + chr8_3:18190189-18190208 None:intergenic 35.0%
!!! GAGAGAGGTAAAGTTTTGTT+AGG - chr8_3:18190190-18190209 Msa1280120:intron 35.0%
!! GTTTTGTTAGGAGTTGTTCA+TGG - chr8_3:18190202-18190221 Msa1280120:intron 35.0%
AATAAGAGGGCAAAACTCAT+TGG - chr8_3:18190298-18190317 Msa1280120:intron 35.0%
CAGAGATCAATTTAAGAGGA+TGG + chr8_3:18190332-18190351 None:intergenic 35.0%
!!! TATTTTGGTGTTAGGAGACA+GGG + chr8_3:18190372-18190391 None:intergenic 35.0%
!!! TTATTTTGGTGTTAGGAGAC+AGG + chr8_3:18190373-18190392 None:intergenic 35.0%
CTCCTAACACCAAAATAATG+AGG - chr8_3:18190375-18190394 Msa1280120:intron 35.0%
GTACAACGAAGGAAAAATCA+AGG + chr8_3:18190510-18190529 None:intergenic 35.0%
ATATAGCCAATGTACAACGA+AGG + chr8_3:18190521-18190540 None:intergenic 35.0%
! ATTATTTGGTTTACCAGGCT+AGG - chr8_3:18190556-18190575 Msa1280120:intron 35.0%
! CGAACTTGAAGATTTTGTTG+TGG - chr8_3:18190822-18190841 Msa1280120:intron 35.0%
CTCATTGAGAAGTTGAAGAA+AGG + chr8_3:18190938-18190957 None:intergenic 35.0%
CTTTCTTCAACTTCTCAATG+AGG - chr8_3:18190936-18190955 Msa1280120:CDS 35.0%
! CCACTAATCGTCGTATTTTT+CGG + chr8_3:18191150-18191169 None:intergenic 35.0%
! TGTGAATAAACCGGTTTCAC+CGG + chr8_3:18183148-18183167 None:intergenic 40.0%
!! GCCGAGTTTTGTGAATAAAC+CGG + chr8_3:18183157-18183176 None:intergenic 40.0%
GTTTATTCACAAAACTCGGC+CGG - chr8_3:18183157-18183176 Msa1280120:three_prime_UTR 40.0%
GATGTAGAGAAACTCTTCTC+TGG - chr8_3:18183204-18183223 Msa1280120:three_prime_UTR 40.0%
AGTTCTTGATGAACTCGAAG+AGG - chr8_3:18183302-18183321 Msa1280120:three_prime_UTR 40.0%
! CTTTCTGGGAAGCTTAAATC+AGG - chr8_3:18183488-18183507 Msa1280120:three_prime_UTR 40.0%
CCTATAAAGGTAGCATCTTC+GGG - chr8_3:18183642-18183661 Msa1280120:intron 40.0%
GAAATTTACACTGTCAGTGC+AGG - chr8_3:18183791-18183810 Msa1280120:intron 40.0%
GCTAATTGGCACACTCTAAT+TGG + chr8_3:18183862-18183881 None:intergenic 40.0%
CTCAATCAGGGAACATATGT+TGG + chr8_3:18184145-18184164 None:intergenic 40.0%
GAAGGTGACTAATCTCAATC+AGG + chr8_3:18184158-18184177 None:intergenic 40.0%
CATGTTCATACTCGGATTCA+CGG + chr8_3:18184275-18184294 None:intergenic 40.0%
TCGGTATCCATGTTCATACT+CGG + chr8_3:18184283-18184302 None:intergenic 40.0%
GACTACTAATCCAAACTCCT+TGG + chr8_3:18184440-18184459 None:intergenic 40.0%
GAAAGATGCTCTTACGTGAA+AGG - chr8_3:18184490-18184509 Msa1280120:intron 40.0%
TCCGTCAATACAATCCTTAG+TGG - chr8_3:18184527-18184546 Msa1280120:intron 40.0%
CAATACAATCCTTAGTGGTG+AGG - chr8_3:18184532-18184551 Msa1280120:intron 40.0%
! TCCTTTGATGGTAGTACTGT+GGG + chr8_3:18184575-18184594 None:intergenic 40.0%
! TTCCTTTGATGGTAGTACTG+TGG + chr8_3:18184576-18184595 None:intergenic 40.0%
ACAGTACTACCATCAAAGGA+AGG - chr8_3:18184575-18184594 Msa1280120:intron 40.0%
CAGTACTACCATCAAAGGAA+GGG - chr8_3:18184576-18184595 Msa1280120:intron 40.0%
CCAACTATCATTATTACGGC+TGG + chr8_3:18185041-18185060 None:intergenic 40.0%
CCAGCCGTAATAATGATAGT+TGG - chr8_3:18185038-18185057 Msa1280120:exon 40.0%
!! ATAGTTGGTGTTAATGGTGG+TGG - chr8_3:18185053-18185072 Msa1280120:CDS 40.0%
!! TAGTTGGTGTTAATGGTGGT+GGG - chr8_3:18185054-18185073 Msa1280120:CDS 40.0%
TCTATCCAGGTACATAAGGA+GGG + chr8_3:18185173-18185192 None:intergenic 40.0%
ATCTATCCAGGTACATAAGG+AGG + chr8_3:18185174-18185193 None:intergenic 40.0%
!! ATTGAAGAATGGAGGTGCTA+AGG - chr8_3:18185360-18185379 Msa1280120:intron 40.0%
TACCTAACAGGCCTGATTAA+TGG + chr8_3:18185586-18185605 None:intergenic 40.0%
GTATCCAATCAAAATGGGAG+AGG - chr8_3:18185930-18185949 Msa1280120:CDS 40.0%
!! TCTTCCTCTCCCATTTTGAT+TGG + chr8_3:18185937-18185956 None:intergenic 40.0%
GAGGAAGAGTAACAGCATTA+AGG - chr8_3:18185949-18185968 Msa1280120:intron 40.0%
AAAATTCGAGCTATGCGGAA+GGG + chr8_3:18186157-18186176 None:intergenic 40.0%
GTTCGAAAATTCGAGCTATG+CGG + chr8_3:18186162-18186181 None:intergenic 40.0%
TCATATCTTGCAAACAGGGA+TGG - chr8_3:18186233-18186252 Msa1280120:intron 40.0%
TGCTGAGAAAATGAGACATG+TGG + chr8_3:18186339-18186358 None:intergenic 40.0%
! AGCTAGAAATATGGGCTGAA+AGG - chr8_3:18186642-18186661 Msa1280120:intron 40.0%
! AAATATGGGCTGAAAGGACT+GGG - chr8_3:18186648-18186667 Msa1280120:intron 40.0%
ATTTGTACCTGCTGATGCTT+TGG + chr8_3:18186705-18186724 None:intergenic 40.0%
AAAGTGATAAACGGCAAGCT+AGG + chr8_3:18186744-18186763 None:intergenic 40.0%
CAGGTTTACACACCAATTAC+AGG - chr8_3:18187021-18187040 Msa1280120:intron 40.0%
ACACACCAATTACAGGCTAA+TGG - chr8_3:18187028-18187047 Msa1280120:intron 40.0%
! CTCTTCCATTAGCCTGTAAT+TGG + chr8_3:18187036-18187055 None:intergenic 40.0%
! AATATAAGAGAGCACAAGCG+AGG + chr8_3:18187422-18187441 None:intergenic 40.0%
TTCCCTACTTGTAGTGTATG+AGG - chr8_3:18187756-18187775 Msa1280120:intron 40.0%
CTCCTCATACACTACAAGTA+GGG + chr8_3:18187761-18187780 None:intergenic 40.0%
TCTCCTCATACACTACAAGT+AGG + chr8_3:18187762-18187781 None:intergenic 40.0%
GTCATTTGTTTCATTCCCCT+TGG - chr8_3:18187861-18187880 Msa1280120:intron 40.0%
TCAAGAACCAAGATGTCCAA+GGG + chr8_3:18187880-18187899 None:intergenic 40.0%
TTTGTCCACATTCCGTAAGT+AGG - chr8_3:18188035-18188054 Msa1280120:intron 40.0%
! TCATTGAATTCTCTGGCTTG+TGG + chr8_3:18188239-18188258 None:intergenic 40.0%
!! TTCTTCTTTGGGATGAGTGT+TGG - chr8_3:18188385-18188404 Msa1280120:intron 40.0%
!! TATTTCAGTAGAGGAGTGCT+AGG - chr8_3:18188514-18188533 Msa1280120:intron 40.0%
! TAAAGTGGTGGGATCCAATA+TGG + chr8_3:18188586-18188605 None:intergenic 40.0%
AGATGCTAATTACTGTTGGC+AGG - chr8_3:18188969-18188988 Msa1280120:intron 40.0%
GATAGGAAAGATCGTATGAC+TGG + chr8_3:18189190-18189209 None:intergenic 40.0%
CCCCAATCATACTTAACTCT+AGG - chr8_3:18189275-18189294 Msa1280120:intron 40.0%
CCCCTAGAGTTAAGTATGAT+TGG + chr8_3:18189280-18189299 None:intergenic 40.0%
CTAGGCATGTGTGTTCTATT+TGG - chr8_3:18189351-18189370 Msa1280120:intron 40.0%
!! GAACCTTTCCACTTTTGACT+TGG - chr8_3:18189402-18189421 Msa1280120:intron 40.0%
CATCCAAGTCAAAAGTGGAA+AGG + chr8_3:18189408-18189427 None:intergenic 40.0%
! TGTGAGCTAAGTTTAGAGTG+AGG - chr8_3:18189426-18189445 Msa1280120:intron 40.0%
! GTGAGCTAAGTTTAGAGTGA+GGG - chr8_3:18189427-18189446 Msa1280120:intron 40.0%
AGACCAAATTGACTGACACT+GGG + chr8_3:18189702-18189721 None:intergenic 40.0%
AAGACCAAATTGACTGACAC+TGG + chr8_3:18189703-18189722 None:intergenic 40.0%
! TTTTCACCTTTTGCGAAGCT+TGG + chr8_3:18190676-18190695 None:intergenic 40.0%
CGAAGCTATTCTTGCTTTGA+AGG - chr8_3:18190710-18190729 Msa1280120:intron 40.0%
TTCGGACAATTCGACAATGA+TGG - chr8_3:18190777-18190796 Msa1280120:intron 40.0%
TCGGACAATTCGACAATGAT+GGG - chr8_3:18190778-18190797 Msa1280120:intron 40.0%
ATGGGGTTTATTTCCACTCT+TGG - chr8_3:18190796-18190815 Msa1280120:intron 40.0%
ACGAAGGTTTCACGAATCTT+AGG - chr8_3:18191099-18191118 Msa1280120:CDS 40.0%
AAGGTTTCACGAATCTTAGG+TGG - chr8_3:18191102-18191121 Msa1280120:CDS 40.0%
!! CGTATTTTTCGGTCAGGAAA+GGG + chr8_3:18191139-18191158 None:intergenic 40.0%
!! TCGTATTTTTCGGTCAGGAA+AGG + chr8_3:18191140-18191159 None:intergenic 40.0%
!! AATCGTCGTATTTTTCGGTC+AGG + chr8_3:18191145-18191164 None:intergenic 40.0%
CCGAAAAATACGACGATTAG+TGG - chr8_3:18191147-18191166 Msa1280120:five_prime_UTR 40.0%
!!! GTTGTTTTGGAGGAATGGAG+AGG + chr8_3:18183053-18183072 None:intergenic 45.0%
!! AGGGGGGTTTGGTTTGAAAT+GGG + chr8_3:18183095-18183114 None:intergenic 45.0%
CCCGAAGATGCTACCTTTAT+AGG + chr8_3:18183645-18183664 None:intergenic 45.0%
!! TTTTTAAAGGGTGTGCCACG+CGG - chr8_3:18183917-18183936 Msa1280120:intron 45.0%
GGCACATTCTAATTGGGCAA+TGG - chr8_3:18183938-18183957 Msa1280120:intron 45.0%
ATCACAACCAGTCATGTGTG+TGG - chr8_3:18184000-18184019 Msa1280120:intron 45.0%
AAGTTGACCACACACATGAC+TGG + chr8_3:18184010-18184029 None:intergenic 45.0%
GGAACATATGTTGGCACACA+AGG + chr8_3:18184136-18184155 None:intergenic 45.0%
CGTGAATCCGAGTATGAACA+TGG - chr8_3:18184273-18184292 Msa1280120:intron 45.0%
CCAATTTAGCCTCACCACTA+AGG + chr8_3:18184544-18184563 None:intergenic 45.0%
CCTTAGTGGTGAGGCTAAAT+TGG - chr8_3:18184541-18184560 Msa1280120:intron 45.0%
! CTTTGATGGTAGTACTGTGG+GGG + chr8_3:18184573-18184592 None:intergenic 45.0%
! CCTTTGATGGTAGTACTGTG+GGG + chr8_3:18184574-18184593 None:intergenic 45.0%
TCTTCAGTCCCTTCCTTTGA+TGG + chr8_3:18184587-18184606 None:intergenic 45.0%
CAAAGGAAGGGACTGAAGAA+AGG - chr8_3:18184588-18184607 Msa1280120:intron 45.0%
TGGTGGGAAGACAACATCTT+TGG - chr8_3:18185070-18185089 Msa1280120:CDS 45.0%
GGTGGGAAGACAACATCTTT+GGG - chr8_3:18185071-18185090 Msa1280120:CDS 45.0%
TGTTTCCCTCCTTATGTACC+TGG - chr8_3:18185165-18185184 Msa1280120:intron 45.0%
TGTTAATTGCTTGGGAGGAC+AGG + chr8_3:18185277-18185296 None:intergenic 45.0%
TATAAGCCAGCTTTCCTGCA+AGG + chr8_3:18185339-18185358 None:intergenic 45.0%
!! CAGCCTTTTGAAAGCTGAGA+AGG + chr8_3:18185517-18185536 None:intergenic 45.0%
GACCATTAATCAGGCCTGTT+AGG - chr8_3:18185581-18185600 Msa1280120:intron 45.0%
TCACTGCTCCAGGTAGAAAT+GGG + chr8_3:18185670-18185689 None:intergenic 45.0%
AGCATTCCCTGCCTCATTAT+TGG - chr8_3:18185766-18185785 Msa1280120:intron 45.0%
TGAGTATAGTGCAGCTTCCA+AGG + chr8_3:18185883-18185902 None:intergenic 45.0%
GAAAATTCGAGCTATGCGGA+AGG + chr8_3:18186158-18186177 None:intergenic 45.0%
TACCAGATATTGTTGGCAGC+TGG - chr8_3:18186590-18186609 Msa1280120:intron 45.0%
! GAAATATGGGCTGAAAGGAC+TGG - chr8_3:18186647-18186666 Msa1280120:intron 45.0%
! GAGAAATCCAAAGCATCAGC+AGG - chr8_3:18186695-18186714 Msa1280120:intron 45.0%
GCTGTTGCTAAAGTAGTTGC+TGG - chr8_3:18187074-18187093 Msa1280120:CDS 45.0%
!! GGGTCAAAAGCGCTTACATT+GGG + chr8_3:18187104-18187123 None:intergenic 45.0%
!! AGGGTCAAAAGCGCTTACAT+TGG + chr8_3:18187105-18187124 None:intergenic 45.0%
TTCATTCCCCTTGGACATCT+TGG - chr8_3:18187870-18187889 Msa1280120:intron 45.0%
CAAGAACCAAGATGTCCAAG+GGG + chr8_3:18187879-18187898 None:intergenic 45.0%
GTCAAGAACCAAGATGTCCA+AGG + chr8_3:18187881-18187900 None:intergenic 45.0%
! GGACATCTTGGTTCTTGACA+TGG - chr8_3:18187882-18187901 Msa1280120:intron 45.0%
ACAAGCCTACTTACGGAATG+TGG + chr8_3:18188043-18188062 None:intergenic 45.0%
!! AACGGTGTTACAATGCTTGC+AGG - chr8_3:18188169-18188188 Msa1280120:intron 45.0%
ATGCTTGCAGGAGATCTTAC+TGG - chr8_3:18188181-18188200 Msa1280120:intron 45.0%
!! GAGATCTTACTGGTTCTGGA+TGG - chr8_3:18188191-18188210 Msa1280120:intron 45.0%
TTGGATCCCACCACTTTATG+TGG - chr8_3:18188588-18188607 Msa1280120:intron 45.0%
TGGATCCCACCACTTTATGT+GGG - chr8_3:18188589-18188608 Msa1280120:intron 45.0%
GAAATGGGTCCCACATAAAG+TGG + chr8_3:18188601-18188620 None:intergenic 45.0%
GGGTCTTACACGTTGGAAAT+GGG + chr8_3:18188616-18188635 None:intergenic 45.0%
TGGGTCTTACACGTTGGAAA+TGG + chr8_3:18188617-18188636 None:intergenic 45.0%
TCAATGTGGGTCTTACACGT+TGG + chr8_3:18188623-18188642 None:intergenic 45.0%
! TTTTGTCTTGGGACAGGTTG+TGG - chr8_3:18188782-18188801 Msa1280120:CDS 45.0%
TTTGTCTTGGGACAGGTTGT+GGG - chr8_3:18188783-18188802 Msa1280120:CDS 45.0%
GCTCACATCCAAGTCAAAAG+TGG + chr8_3:18189413-18189432 None:intergenic 45.0%
TAGAGTGAGGGCTATGTCTT+TGG - chr8_3:18189439-18189458 Msa1280120:intron 45.0%
AGTCCCAGTGTCAGTCAATT+TGG - chr8_3:18189696-18189715 Msa1280120:intron 45.0%
CGAATATGCAGAGCAACACT+AGG - chr8_3:18190605-18190624 Msa1280120:intron 45.0%
TAACCCCTTTGCATGGTTTG+TGG - chr8_3:18190747-18190766 Msa1280120:intron 45.0%
CAACCACAAACCATGCAAAG+GGG + chr8_3:18190753-18190772 None:intergenic 45.0%
CCAACCACAAACCATGCAAA+GGG + chr8_3:18190754-18190773 None:intergenic 45.0%
! ATGGTTTGTGGTTGGCAGTT+CGG - chr8_3:18190759-18190778 Msa1280120:intron 45.0%
CGGACAATTCGACAATGATG+GGG - chr8_3:18190779-18190798 Msa1280120:intron 45.0%
! TTCAAGTTCGATGCCAAGAG+TGG + chr8_3:18190812-18190831 None:intergenic 45.0%
! CTCGGGACAATTTTCGAACA+AGG - chr8_3:18190992-18191011 Msa1280120:CDS 45.0%
! GGTCAGGAAAGGGCTTTTAT+AGG + chr8_3:18191129-18191148 None:intergenic 45.0%
!! ATTAAAATGTTTAATTAAAT+AGG + chr8_3:18183726-18183745 None:intergenic 5.0%
!!! ATTTGATATATATTTTTTAA+AGG - chr8_3:18183904-18183923 Msa1280120:intron 5.0%
!!! TTTGATATATATTTTTTAAA+GGG - chr8_3:18183905-18183924 Msa1280120:intron 5.0%
!! GTATTTATTATTTAAATAAA+AGG + chr8_3:18184246-18184265 None:intergenic 5.0%
GCTCAAGCACACAGCAGAAA+TGG - chr8_3:18182999-18183018 Msa1280120:three_prime_UTR 50.0%
!! TTTTGGAGGAATGGAGAGGC+GGG + chr8_3:18183049-18183068 None:intergenic 50.0%
!!! GTTTTGGAGGAATGGAGAGG+CGG + chr8_3:18183050-18183069 None:intergenic 50.0%
GAAATGGGGAGGTGAAGATG+AGG + chr8_3:18183080-18183099 None:intergenic 50.0%
!! GGGTTTGGTTTGAAATGGGG+AGG + chr8_3:18183091-18183110 None:intergenic 50.0%
!! GGGGGGTTTGGTTTGAAATG+GGG + chr8_3:18183094-18183113 None:intergenic 50.0%
!! GAGGGGGGTTTGGTTTGAAA+TGG + chr8_3:18183096-18183115 None:intergenic 50.0%
! GAATAAACCGGTTTCACCGG+CGG + chr8_3:18183145-18183164 None:intergenic 50.0%
GGTAGCATCTTCGGGTGATT+TGG - chr8_3:18183650-18183669 Msa1280120:intron 50.0%
!! GCATCTTCGGGTGATTTGGT+TGG - chr8_3:18183654-18183673 Msa1280120:intron 50.0%
GGCACACTCTAATTGGCCAA+TGG + chr8_3:18183855-18183874 None:intergenic 50.0%
CCACGCGGCACATTCTAATT+GGG - chr8_3:18183932-18183951 Msa1280120:intron 50.0%
! GACTGGTTGTGATGCACTGA+CGG + chr8_3:18183993-18184012 None:intergenic 50.0%
CCCCACAGTACTACCATCAA+AGG - chr8_3:18184571-18184590 Msa1280120:intron 50.0%
! GCTTTTCCTTGCAGGAAAGC+TGG - chr8_3:18185330-18185349 Msa1280120:CDS 50.0%
CTCACTGCTCCAGGTAGAAA+TGG + chr8_3:18185671-18185690 None:intergenic 50.0%
CAAAAGTTGCTCACTGCTCC+AGG + chr8_3:18185680-18185699 None:intergenic 50.0%
! CTGGAGCAGTGAGCAACTTT+TGG - chr8_3:18185678-18185697 Msa1280120:intron 50.0%
GTTATCCCAGCAAACGTGGT+AGG + chr8_3:18186062-18186081 None:intergenic 50.0%
CAGTGTTATCCCAGCAAACG+TGG + chr8_3:18186066-18186085 None:intergenic 50.0%
CACCAGCTGCCAACAATATC+TGG + chr8_3:18186595-18186614 None:intergenic 50.0%
GACTGGGTGTGAGATTGTTG+TGG - chr8_3:18186664-18186683 Msa1280120:intron 50.0%
!! ACAGCTTGTGAAAGCACTGC+AGG + chr8_3:18186862-18186881 None:intergenic 50.0%
GCGAGGTGTACTAGTAGAAG+TGG + chr8_3:18187405-18187424 None:intergenic 50.0%
GCAAGCAATGCTATCGCTTC+AGG + chr8_3:18187710-18187729 None:intergenic 50.0%
GTTCTTGACATGGCTAGAGC+TGG - chr8_3:18187892-18187911 Msa1280120:intron 50.0%
!! GCAGGAGATCTTACTGGTTC+TGG - chr8_3:18188187-18188206 Msa1280120:intron 50.0%
!! CTGGTTCTGGATGGAACTAC+TGG - chr8_3:18188200-18188219 Msa1280120:intron 50.0%
TGGGTCCCACATAAAGTGGT+GGG + chr8_3:18188597-18188616 None:intergenic 50.0%
ATGGGTCCCACATAAAGTGG+TGG + chr8_3:18188598-18188617 None:intergenic 50.0%
TCTTGCAGAACCATCCAGCT+TGG + chr8_3:18188829-18188848 None:intergenic 50.0%
! AAGCTGGATGGTTCTGCAAG+AGG - chr8_3:18188828-18188847 Msa1280120:intron 50.0%
TTACTGTTGGCAGGTCAGTG+TGG - chr8_3:18188978-18188997 Msa1280120:intron 50.0%
!! GTCAGTGTGGTTGATGAGCT+GGG - chr8_3:18188991-18189010 Msa1280120:intron 50.0%
ACAAAGGCCTCTGCATCGAA+GGG + chr8_3:18189066-18189085 None:intergenic 50.0%
GTGAACAGCAAACTTAGGCG+AGG - chr8_3:18190061-18190080 Msa1280120:intron 50.0%
TTCTGAATCGTAGCCTAGCC+TGG + chr8_3:18190572-18190591 None:intergenic 50.0%
GAAGCTTGGCCTCTCAAGAA+TGG + chr8_3:18190662-18190681 None:intergenic 50.0%
GCTGGTATAACCCCTTTGCA+TGG - chr8_3:18190740-18190759 Msa1280120:intron 50.0%
! CCCTTTGCATGGTTTGTGGT+TGG - chr8_3:18190751-18190770 Msa1280120:intron 50.0%
GCCAACCACAAACCATGCAA+AGG + chr8_3:18190755-18190774 None:intergenic 50.0%
!! CACGAGAGTATTGCTCACGA+AGG - chr8_3:18191083-18191102 Msa1280120:CDS 50.0%
TGAACCGGGTTCGAGATGAG+GGG + chr8_3:18183113-18183132 None:intergenic 55.0%
GTGAACCGGGTTCGAGATGA+GGG + chr8_3:18183114-18183133 None:intergenic 55.0%
TGTGAACCGGGTTCGAGATG+AGG + chr8_3:18183115-18183134 None:intergenic 55.0%
GCCACGCGGCACATTCTAAT+TGG - chr8_3:18183931-18183950 Msa1280120:intron 55.0%
CCCAATTAGAATGTGCCGCG+TGG + chr8_3:18183935-18183954 None:intergenic 55.0%
GCTCTTACGTGAAAGGTCGC+TGG - chr8_3:18184497-18184516 Msa1280120:intron 55.0%
AGCAAACGTGGTAGGCTACG+TGG + chr8_3:18186054-18186073 None:intergenic 55.0%
ACGTAGCCTACCACGTTTGC+TGG - chr8_3:18186053-18186072 Msa1280120:intron 55.0%
CGTAGCCTACCACGTTTGCT+GGG - chr8_3:18186054-18186073 Msa1280120:intron 55.0%
CGGAAGGGCTAGGCTAATGA+AGG + chr8_3:18186142-18186161 None:intergenic 55.0%
TGCTATCGCTTCAGGTCACG+TGG + chr8_3:18187702-18187721 None:intergenic 55.0%
GGACAGGTTGTGGGTGTAAC+TGG - chr8_3:18188792-18188811 Msa1280120:intron 55.0%
! CTGGATGGTTCTGCAAGAGG+TGG - chr8_3:18188831-18188850 Msa1280120:intron 55.0%
TTCTGCAAGAGGTGGCTGTG+TGG - chr8_3:18188839-18188858 Msa1280120:intron 55.0%
!! GGTCAGTGTGGTTGATGAGC+TGG - chr8_3:18188990-18189009 Msa1280120:intron 55.0%
CCTCTGCATCGAAGGGTTGA+AGG + chr8_3:18189059-18189078 None:intergenic 55.0%
CCTTCAACCCTTCGATGCAG+AGG - chr8_3:18189056-18189075 Msa1280120:CDS 55.0%
GACAAAGGCCTCTGCATCGA+AGG + chr8_3:18189067-18189086 None:intergenic 55.0%
GCAGAGCAACACTAGGTCAC+AGG - chr8_3:18190612-18190631 Msa1280120:intron 55.0%
GAGAGGCCAAGCTTCGCAAA+AGG - chr8_3:18190667-18190686 Msa1280120:intron 55.0%
!! TGCTTTGAAGGCAGCTCAGC+TGG - chr8_3:18190722-18190741 Msa1280120:intron 55.0%
GAGGCGGGTGAATGAAGCAG+AGG + chr8_3:18183034-18183053 None:intergenic 60.0%
GGTTCGAGATGAGGGGGGTT+TGG + chr8_3:18183106-18183125 None:intergenic 60.0%
AACCCCCCTCATCTCGAACC+CGG - chr8_3:18183106-18183125 Msa1280120:intron 60.0%
AACCGGGTTCGAGATGAGGG+GGG + chr8_3:18183111-18183130 None:intergenic 60.0%
GAACCGGGTTCGAGATGAGG+GGG + chr8_3:18183112-18183131 None:intergenic 60.0%
! TAAACCGGTTTCACCGGCGG+CGG + chr8_3:18183142-18183161 None:intergenic 60.0%
TCGAGCTATGCGGAAGGGCT+AGG + chr8_3:18186152-18186171 None:intergenic 60.0%
GGCGGCGGAGCATGTGAACC+GGG + chr8_3:18183127-18183146 None:intergenic 70.0%
CGGCGGCGGAGCATGTGAAC+CGG + chr8_3:18183128-18183147 None:intergenic 70.0%
CGGTTCACATGCTCCGCCGC+CGG - chr8_3:18183126-18183145 Msa1280120:intron 70.0%
TGCTCCGCCGCCGGTGAAAC+CGG - chr8_3:18183135-18183154 Msa1280120:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 18182953 18191194 18182953 ID=Msa1280120;Name=Msa1280120
chr8_3 mRNA 18182953 18191194 18182953 ID=Msa1280120-mRNA-1;Parent=Msa1280120;Name=Msa1280120-mRNA-1;_AED=0.09;_eAED=0.09;_QI=65|0.90|1|1|0.81|0.75|12|585|331
chr8_3 exon 18182953 18183079 18182953 ID=Msa1280120-mRNA-1:exon:6935;Parent=Msa1280120-mRNA-1
chr8_3 exon 18183134 18183574 18183134 ID=Msa1280120-mRNA-1:exon:6934;Parent=Msa1280120-mRNA-1
chr8_3 exon 18185026 18185156 18185026 ID=Msa1280120-mRNA-1:exon:6933;Parent=Msa1280120-mRNA-1
chr8_3 exon 18185287 18185349 18185287 ID=Msa1280120-mRNA-1:exon:6932;Parent=Msa1280120-mRNA-1
chr8_3 exon 18185888 18185956 18185888 ID=Msa1280120-mRNA-1:exon:6931;Parent=Msa1280120-mRNA-1
chr8_3 exon 18187041 18187123 18187041 ID=Msa1280120-mRNA-1:exon:6930;Parent=Msa1280120-mRNA-1
chr8_3 exon 18187213 18187281 18187213 ID=Msa1280120-mRNA-1:exon:6929;Parent=Msa1280120-mRNA-1
chr8_3 exon 18187431 18187551 18187431 ID=Msa1280120-mRNA-1:exon:6928;Parent=Msa1280120-mRNA-1
chr8_3 exon 18188766 18188803 18188766 ID=Msa1280120-mRNA-1:exon:6927;Parent=Msa1280120-mRNA-1
chr8_3 exon 18189055 18189113 18189055 ID=Msa1280120-mRNA-1:exon:6926;Parent=Msa1280120-mRNA-1
chr8_3 exon 18189217 18189290 18189217 ID=Msa1280120-mRNA-1:exon:6925;Parent=Msa1280120-mRNA-1
chr8_3 exon 18190824 18191194 18190824 ID=Msa1280120-mRNA-1:exon:6924;Parent=Msa1280120-mRNA-1
chr8_3 five_prime_UTR 18191130 18191194 18191130 ID=Msa1280120-mRNA-1:five_prime_utr;Parent=Msa1280120-mRNA-1
chr8_3 CDS 18190824 18191129 18190824 ID=Msa1280120-mRNA-1:cds;Parent=Msa1280120-mRNA-1
chr8_3 CDS 18189217 18189290 18189217 ID=Msa1280120-mRNA-1:cds;Parent=Msa1280120-mRNA-1
chr8_3 CDS 18189055 18189113 18189055 ID=Msa1280120-mRNA-1:cds;Parent=Msa1280120-mRNA-1
chr8_3 CDS 18188766 18188803 18188766 ID=Msa1280120-mRNA-1:cds;Parent=Msa1280120-mRNA-1
chr8_3 CDS 18187431 18187551 18187431 ID=Msa1280120-mRNA-1:cds;Parent=Msa1280120-mRNA-1
chr8_3 CDS 18187213 18187281 18187213 ID=Msa1280120-mRNA-1:cds;Parent=Msa1280120-mRNA-1
chr8_3 CDS 18187041 18187123 18187041 ID=Msa1280120-mRNA-1:cds;Parent=Msa1280120-mRNA-1
chr8_3 CDS 18185888 18185956 18185888 ID=Msa1280120-mRNA-1:cds;Parent=Msa1280120-mRNA-1
chr8_3 CDS 18185287 18185349 18185287 ID=Msa1280120-mRNA-1:cds;Parent=Msa1280120-mRNA-1
chr8_3 CDS 18185043 18185156 18185043 ID=Msa1280120-mRNA-1:cds;Parent=Msa1280120-mRNA-1
chr8_3 three_prime_UTR 18185026 18185042 18185026 ID=Msa1280120-mRNA-1:three_prime_utr;Parent=Msa1280120-mRNA-1
chr8_3 three_prime_UTR 18183134 18183574 18183134 ID=Msa1280120-mRNA-1:three_prime_utr;Parent=Msa1280120-mRNA-1
chr8_3 three_prime_UTR 18182953 18183079 18182953 ID=Msa1280120-mRNA-1:three_prime_utr;Parent=Msa1280120-mRNA-1
Gene Sequence

>Msa1280120

ATGGCTACAACTGCCTCTGCTTCATTCACCCGCCTCTCCATTCCTCCAAAACAACAATTCCTCATCTTCACCTCCCCATTTCAAACCAAACCCCCCTCATCTCGAACCCGGTTCACATGCTCCGCCGCCGGTGAAACCGGTTTATTCACAAAACTCGGCCGGTTACTAAAAGAAAAAGCAAAAAGCGATGTAGAGAAACTCTTCTCTGGTTTCTCCAAAACTCGTAACAATATCTCCGTCATTGATGAGCTTCTTCTTTATTGGAATCTCTCTGATACTGATAGAGTTCTTGATGAACTCGAAGAGGAAGCACTGAAGAAGAATGTTTTGGATTTGTTAAGCAACAAGGGGAGTAAAACTGAACTTCAACTTGGATATAGGAAACCAGCCGTAATAATGATAGTTGGTGTTAATGGTGGTGGGAAGACAACATCTTTGGGAAAGCTGGCTTATAGATTGAAGAATGGAGGTGCTAAGATATTGTTGGCAGCTGGTGATACATTCAGAGCAGCCGCTAGTGATCAGCTAGAAATATGGGCTGAAAGGACTGGGTGTGAGATTGTTGTGGCTGAATCTGAGAAATCCAAAGCATCAGCAGTGCTTTCACAAGCTGTAAAAAGAGGAAAAGAGCTAGGTTATGATATTGTATTGTGTGATACATCTGGACGTTTACACACCAATTACAGGCTAATGGAAGAGTTAATTTCTTGTAAAAAGGCTGTTGCTAAAGTAGTTGCTGGTGCACCCAATGAGATCTTACTGGTTCTGGATGGAACTACTGGTTTGAATATGTTGCCACAAGCCAGAGAATTCAATGAAGTTGTGGGTGTAACTGGTTTAATTTTGACCAAGCTGGATGGTTCTGCAAGAGGTGGCTGTGTGGTCAGTGTGGTTGATGAGCTGGGAATCCCTGTAAAATTTGTTGGTGTTGGTGAAGGTGTTGAAGACCTTCAACCCTTCGATGCAGAGGCCTTTGTCAATGCCATTTTTCTGTAA

Protein sequence

>Msa1280120

MATTASASFTRLSIPPKQQFLIFTSPFQTKPPSSRTRFTCSAAGETGLFTKLGRLLKEKAKSDVEKLFSGFSKTRNNISVIDELLLYWNLSDTDRVLDELEEEALKKNVLDLLSNKGSKTELQLGYRKPAVIMIVGVNGGGKTTSLGKLAYRLKNGGAKILLAAGDTFRAAASDQLEIWAERTGCEIVVAESEKSKASAVLSQAVKRGKELGYDIVLCDTSGRLHTNYRLMEELISCKKAVAKVVAGAPNEILLVLDGTTGLNMLPQAREFNEVVGVTGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDAEAFVNAIFL*