Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367290 | XP_003600574.1 | 96.413 | 446 | 11 | 3 | 1 | 445 | 1 | 442 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367290 | G7IV74 | 96.413 | 446 | 11 | 3 | 1 | 445 | 1 | 442 | 0.0 | 856 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0367290 | -0.816422 | 5.577056e-52 | -8.615850e-47 |
| Msa0017940 | Msa0367290 | -0.813665 | 2.282043e-51 | -8.615850e-47 |
| Msa0027540 | Msa0367290 | -0.803842 | 2.873968e-49 | -8.615850e-47 |
| Msa0038350 | Msa0367290 | 0.819233 | 1.293509e-52 | -8.615850e-47 |
| Msa0048020 | Msa0367290 | -0.823538 | 1.312665e-53 | -8.615850e-47 |
| Msa0060350 | Msa0367290 | -0.800794 | 1.219236e-48 | -8.615850e-47 |
| Msa0073820 | Msa0367290 | -0.809455 | 1.875872e-50 | -8.615850e-47 |
| Msa0075310 | Msa0367290 | -0.802646 | 5.083523e-49 | -8.615850e-47 |
| Msa0084680 | Msa0367290 | -0.811688 | 6.179072e-51 | -8.615850e-47 |
| Msa0135080 | Msa0367290 | -0.802179 | 6.344015e-49 | -8.615850e-47 |
| Msa0135980 | Msa0367290 | -0.805974 | 1.030339e-49 | -8.615850e-47 |
| Msa0141430 | Msa0367290 | -0.822651 | 2.113742e-53 | -8.615850e-47 |
| Msa0168100 | Msa0367290 | -0.812755 | 3.613497e-51 | -8.615850e-47 |
| Msa0171930 | Msa0367290 | -0.800733 | 1.255113e-48 | -8.615850e-47 |
| Msa0183620 | Msa0367290 | -0.803181 | 3.940670e-49 | -8.615850e-47 |
| Msa0197900 | Msa0367290 | -0.805313 | 1.418020e-49 | -8.615850e-47 |
| Msa0200950 | Msa0367290 | 0.841419 | 4.806054e-58 | -8.615850e-47 |
| Msa0207000 | Msa0367290 | -0.814181 | 1.755852e-51 | -8.615850e-47 |
| Msa0217470 | Msa0367290 | -0.800617 | 1.325050e-48 | -8.615850e-47 |
| Msa0223390 | Msa0367290 | -0.811829 | 5.755430e-51 | -8.615850e-47 |
| Msa0367290 | Msa0367370 | -0.812358 | 4.413720e-51 | -8.615850e-47 |
| Msa0367290 | Msa0380310 | -0.808804 | 2.586423e-50 | -8.615850e-47 |
| Msa0367290 | Msa0431430 | -0.803142 | 4.014657e-49 | -8.615850e-47 |
| Msa0367290 | Msa0459910 | 0.957429 | 2.772725e-115 | -8.615850e-47 |
| Msa0367290 | Msa0473490 | -0.802586 | 5.229961e-49 | -8.615850e-47 |
| Msa0367290 | Msa0506620 | 0.842011 | 3.354345e-58 | -8.615850e-47 |
| Msa0367290 | Msa0516450 | -0.801289 | 9.659641e-49 | -8.615850e-47 |
| Msa0367290 | Msa0526640 | 0.807240 | 5.567198e-50 | -8.615850e-47 |
| Msa0367290 | Msa0527600 | -0.803230 | 3.849463e-49 | -8.615850e-47 |
| Msa0367290 | Msa0542010 | -0.808291 | 3.329039e-50 | -8.615850e-47 |
| Msa0367290 | Msa0574170 | -0.809284 | 2.041951e-50 | -8.615850e-47 |
| Msa0367290 | Msa0581460 | -0.812061 | 5.123013e-51 | -8.615850e-47 |
| Msa0367290 | Msa0604700 | -0.804839 | 1.781180e-49 | -8.615850e-47 |
| Msa0367290 | Msa0659800 | 0.801731 | 7.839761e-49 | -8.615850e-47 |
| Msa0367290 | Msa0667970 | -0.801792 | 7.616229e-49 | -8.615850e-47 |
| Msa0367290 | Msa0681890 | -0.829767 | 4.282500e-55 | -8.615850e-47 |
| Msa0367290 | Msa0685540 | -0.825096 | 5.647996e-54 | -8.615850e-47 |
| Msa0367290 | Msa0694690 | 0.820786 | 5.707328e-53 | -8.615850e-47 |
| Msa0367290 | Msa0701840 | 0.806722 | 7.163753e-50 | -8.615850e-47 |
| Msa0367290 | Msa0707780 | -0.817744 | 2.813950e-52 | -8.615850e-47 |
| Msa0367290 | Msa0730180 | -0.826282 | 2.954309e-54 | -8.615850e-47 |
| Msa0367290 | Msa0764020 | -0.825569 | 4.364275e-54 | -8.615850e-47 |
| Msa0367290 | Msa0770430 | -0.824384 | 8.311466e-54 | -8.615850e-47 |
| Msa0367290 | Msa0837990 | -0.809662 | 1.693503e-50 | -8.615850e-47 |
| Msa0367290 | Msa0843690 | -0.815570 | 8.639129e-52 | -8.615850e-47 |
| Msa0367290 | Msa0848380 | -0.823847 | 1.110818e-53 | -8.615850e-47 |
| Msa0367290 | Msa0890250 | -0.833776 | 4.392129e-56 | -8.615850e-47 |
| Msa0367290 | Msa0925160 | -0.804141 | 2.491022e-49 | -8.615850e-47 |
| Msa0367290 | Msa0955260 | -0.800909 | 1.155239e-48 | -8.615850e-47 |
| Msa0367290 | Msa0990520 | -0.811615 | 6.406998e-51 | -8.615850e-47 |
| Msa0367290 | Msa1067430 | -0.802080 | 6.647164e-49 | -8.615850e-47 |
| Msa0367290 | Msa1073840 | -0.813892 | 2.033635e-51 | -8.615850e-47 |
| Msa0367290 | Msa1105290 | -0.804012 | 2.649375e-49 | -8.615850e-47 |
| Msa0367290 | Msa1106560 | -0.801062 | 1.074895e-48 | -8.615850e-47 |
| Msa0367290 | Msa1151960 | -0.800957 | 1.129276e-48 | -8.615850e-47 |
| Msa0367290 | Msa1159100 | -0.822859 | 1.890679e-53 | -8.615850e-47 |
| Msa0367290 | Msa1171000 | 0.860574 | 1.878163e-63 | -8.615850e-47 |
| Msa0367290 | Msa1183390 | -0.827877 | 1.227067e-54 | -8.615850e-47 |
| Msa0367290 | Msa1229050 | -0.802798 | 4.728780e-49 | -8.615850e-47 |
| Msa0367290 | Msa1242330 | -0.806138 | 9.513409e-50 | -8.615850e-47 |
| Msa0367290 | Msa1271490 | -0.802828 | 4.661302e-49 | -8.615850e-47 |
| Msa0367290 | Msa1271510 | -0.820207 | 7.750609e-53 | -8.615850e-47 |
| Msa0367290 | Msa1280120 | -0.803998 | 2.666990e-49 | -8.615850e-47 |
| Msa0367290 | Msa1309360 | -0.820463 | 6.767678e-53 | -8.615850e-47 |
| Msa0367290 | Msa1385900 | -0.800865 | 1.179465e-48 | -8.615850e-47 |
| Msa0367290 | Msa1407710 | -0.813523 | 2.451380e-51 | -8.615850e-47 |
| Msa0367290 | Msa1412520 | -0.824462 | 7.966425e-54 | -8.615850e-47 |
| Msa0367290 | Msa1418200 | -0.813107 | 3.026390e-51 | -8.615850e-47 |
| Msa0367290 | Msa1430270 | -0.806882 | 6.630225e-50 | -8.615850e-47 |
| Msa0367290 | Msa1447230 | -0.827143 | 1.840628e-54 | -8.615850e-47 |
| Msa0239660 | Msa0367290 | -0.819784 | 9.683220e-53 | -8.615850e-47 |
| Msa0258670 | Msa0367290 | 0.837065 | 6.474235e-57 | -8.615850e-47 |
| Msa0265820 | Msa0367290 | -0.808426 | 3.115613e-50 | -8.615850e-47 |
| Msa0277640 | Msa0367290 | -0.818211 | 2.206149e-52 | -8.615850e-47 |
| Msa0296610 | Msa0367290 | -0.803762 | 2.985514e-49 | -8.615850e-47 |
| Msa0302660 | Msa0367290 | -0.800863 | 1.180648e-48 | -8.615850e-47 |
| Msa0317260 | Msa0367290 | -0.800483 | 1.411061e-48 | -8.615850e-47 |
| Msa0323990 | Msa0367290 | -0.812837 | 3.467388e-51 | -8.615850e-47 |
| Msa0339860 | Msa0367290 | -0.808089 | 3.675380e-50 | -8.615850e-47 |
| Msa0342200 | Msa0367290 | -0.838182 | 3.346617e-57 | -8.615850e-47 |
| Msa0352510 | Msa0367290 | -0.801494 | 8.770695e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367290 | MtrunA17_Chr3g0108551 | 96.413 | 446 | 11 | 3 | 1 | 445 | 1 | 442 | 0.0 | 856 |
| Msa0367290 | MtrunA17_Chr7g0245331 | 48.413 | 378 | 164 | 10 | 1 | 373 | 1 | 352 | 4.33e-93 | 287 |
| Msa0367290 | MtrunA17_Chr8g0334431 | 58.791 | 182 | 61 | 4 | 213 | 380 | 132 | 313 | 4.02e-58 | 194 |
| Msa0367290 | MtrunA17_Chr7g0259821 | 34.263 | 251 | 131 | 5 | 147 | 378 | 53 | 288 | 3.13e-30 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0367290 | AT2G30530.1 | 59.006 | 322 | 100 | 7 | 52 | 371 | 57 | 348 | 4.36e-98 | 299 |
| Msa0367290 | AT5G01970.1 | 55.363 | 289 | 111 | 4 | 87 | 371 | 35 | 309 | 4.44e-95 | 290 |
| Msa0367290 | AT5G01970.2 | 64.623 | 212 | 70 | 3 | 164 | 371 | 2 | 212 | 4.04e-84 | 259 |
| Msa0367290 | AT1G30050.1 | 46.011 | 376 | 126 | 10 | 1 | 370 | 1 | 305 | 1.15e-81 | 257 |
| Msa0367290 | AT4G02800.1 | 36.098 | 205 | 119 | 2 | 161 | 355 | 79 | 281 | 2.58e-32 | 125 |
Find 135 sgRNAs with CRISPR-Local
Find 513 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTAAGTGATTCGAATTT+TGG | 0.069894 | 3_1:+62945594 | None:intergenic |
| TCTTCGCTTTCGTCGCTTTA+TGG | 0.109391 | 3_1:-62948606 | Msa0367290:CDS |
| CTTTATATCCTTTCCTGATA+TGG | 0.141349 | 3_1:+62941650 | None:intergenic |
| CTCCTTGCGTTGGCGACATC+TGG | 0.173544 | 3_1:+62945124 | None:intergenic |
| GTCCCAGGTATTTCAGATTC+TGG | 0.193774 | 3_1:+62946792 | None:intergenic |
| GCGACATCTGGGACCGCAAC+TGG | 0.216020 | 3_1:+62945136 | None:intergenic |
| AATTCAACCTCCTCGAATTC+TGG | 0.234711 | 3_1:+62948819 | None:intergenic |
| ATGAGCCCAAGAGTGGATTT+TGG | 0.240487 | 3_1:-62946866 | Msa0367290:CDS |
| GGACAGTCCGACAATTATTA+AGG | 0.278402 | 3_1:-62945555 | Msa0367290:CDS |
| GAAGAAGACGGTGTAATAAT+TGG | 0.289785 | 3_1:+62948711 | None:intergenic |
| CCAAAGCAAAACTGCTTCTT+CGG | 0.293791 | 3_1:-62943899 | Msa0367290:CDS |
| GACGGTGTAATAATTGGATT+AGG | 0.303446 | 3_1:+62948717 | None:intergenic |
| TGGCACCATTGGTAAATCTT+TGG | 0.322461 | 3_1:-62945495 | Msa0367290:CDS |
| GGCATTTCATCTCCCATATC+AGG | 0.332511 | 3_1:-62941663 | Msa0367290:CDS |
| TGGCATCTGAAGACATTGAT+AGG | 0.340914 | 3_1:+62941715 | None:intergenic |
| TGGTGAGTGGTGGCTCGATT+TGG | 0.343473 | 3_1:+62948917 | None:intergenic |
| TTAGAATCGAGGGGCATAAT+AGG | 0.343574 | 3_1:+62941756 | None:intergenic |
| TTTATATCCTTTCCTGATAT+GGG | 0.343848 | 3_1:+62941651 | None:intergenic |
| ACCGTCACCGACGAAGATTC+TGG | 0.367346 | 3_1:-62948895 | Msa0367290:five_prime_UTR |
| TTCTGATCCCATGCCAAGAT+TGG | 0.373653 | 3_1:+62941695 | None:intergenic |
| TAGCCAAGATGATGATGATT+TGG | 0.376397 | 3_1:-62943775 | Msa0367290:intron |
| GGTGAGTGGTGGCTCGATTT+GGG | 0.378025 | 3_1:+62948918 | None:intergenic |
| CGTTGACACTTCTTCAACTT+CGG | 0.385273 | 3_1:-62948676 | Msa0367290:CDS |
| GATCCAATCGAAACGGTTAT+CGG | 0.393070 | 3_1:+62948841 | None:intergenic |
| AGGAAACCCGTAAACATATC+AGG | 0.396756 | 3_1:-62945224 | Msa0367290:CDS |
| CGACATCTGGGACCGCAACT+GGG | 0.398383 | 3_1:+62945137 | None:intergenic |
| CCAAAATTCGAATCACTTAG+AGG | 0.398799 | 3_1:-62945594 | Msa0367290:CDS |
| GAAGACTGTCAAGGCTGATC+TGG | 0.400598 | 3_1:-62943871 | Msa0367290:CDS |
| TTGGAGGATGGAGGAGCAAT+AGG | 0.418480 | 3_1:+62948546 | None:intergenic |
| AGACCGCGGAGAAGAGAGAT+TGG | 0.427799 | 3_1:+62948578 | None:intergenic |
| CAAAGCAAAACTGCTTCTTC+GGG | 0.430445 | 3_1:-62943898 | Msa0367290:CDS |
| TCCAGAATCTTCGTCGGTGA+CGG | 0.436466 | 3_1:+62948894 | None:intergenic |
| AACGCCCCAAAATCCACTCT+TGG | 0.436480 | 3_1:+62946860 | None:intergenic |
| TAGGACTTCAGATATCATTC+AGG | 0.441846 | 3_1:-62945244 | Msa0367290:CDS |
| GACAGTCCGACAATTATTAA+GGG | 0.445266 | 3_1:-62945554 | Msa0367290:CDS |
| TCCTTGCGTTGGCGACATCT+GGG | 0.451239 | 3_1:+62945125 | None:intergenic |
| ACGGTGTAATAATTGGATTA+GGG | 0.453368 | 3_1:+62948718 | None:intergenic |
| ACATCTTCTCTTACTCATAT+CGG | 0.454109 | 3_1:-62945518 | Msa0367290:CDS |
| TGCATTTAGTGCTTGTCAAA+CGG | 0.454393 | 3_1:-62941307 | Msa0367290:three_prime_UTR |
| TAGAGGAGGGCAATCTCAAA+AGG | 0.454947 | 3_1:-62945577 | Msa0367290:CDS |
| TCTAATCCCTTAATAATTGT+CGG | 0.472952 | 3_1:+62945548 | None:intergenic |
| AAGAGCATCTCTTCTATAGC+TGG | 0.472982 | 3_1:-62941585 | Msa0367290:CDS |
| CTCCCCTTTCGCGATTTACA+CGG | 0.478421 | 3_1:+62943799 | None:intergenic |
| ATGTCTTCAGATGCCAATCT+TGG | 0.479100 | 3_1:-62941708 | Msa0367290:CDS |
| GAACTTTGTAGGACAGAGTC+AGG | 0.482745 | 3_1:-62945190 | Msa0367290:CDS |
| GTTCTTGCAACGTTGTAGAA+TGG | 0.485883 | 3_1:+62945160 | None:intergenic |
| TTTCCCCTTGATGTTACGCC+AGG | 0.486371 | 3_1:+62946753 | None:intergenic |
| AATATCCTGGCGTAACATCA+AGG | 0.490768 | 3_1:-62946758 | Msa0367290:CDS |
| ACTCATATCGGTGGCACCAT+TGG | 0.490889 | 3_1:-62945506 | Msa0367290:CDS |
| ATACCAAATCATCATCATCT+TGG | 0.501866 | 3_1:+62943772 | None:intergenic |
| CAAAACCGCGCTGAGCGTTA+CGG | 0.503784 | 3_1:-62948866 | Msa0367290:five_prime_UTR |
| TCGAGGGGCATAATAGGCAC+TGG | 0.503893 | 3_1:+62941762 | None:intergenic |
| TATTGTGACCTTGTTGTCCC+AGG | 0.505682 | 3_1:+62946777 | None:intergenic |
| CGAGGGGCATAATAGGCACT+GGG | 0.508411 | 3_1:+62941763 | None:intergenic |
| TTTGGGATCCGATCATGAAC+CGG | 0.510340 | 3_1:+62948935 | None:intergenic |
| ACGCCCCAAAATCCACTCTT+GGG | 0.513772 | 3_1:+62946861 | None:intergenic |
| GTGCCGATAACCGTTTCGAT+TGG | 0.514166 | 3_1:-62948844 | Msa0367290:five_prime_UTR |
| CACCATTGGTAAATCTTTGG+AGG | 0.517755 | 3_1:-62945492 | Msa0367290:intron |
| CCGTCTTCTTCGAGTAATGA+TGG | 0.518729 | 3_1:-62948699 | Msa0367290:CDS |
| GATGGAGGAGCAATAGGAGT+AGG | 0.521685 | 3_1:+62948552 | None:intergenic |
| ATTGAAAATTGATTATTCAC+CGG | 0.522424 | 3_1:-62948954 | Msa0367290:five_prime_UTR |
| GTGAAGAACTCTGATGCGAC+CGG | 0.523618 | 3_1:+62948983 | None:intergenic |
| CTGAAATACCTGGGACAACA+AGG | 0.524496 | 3_1:-62946785 | Msa0367290:CDS |
| ATTATTCACCGGTTCATGAT+CGG | 0.524715 | 3_1:-62948943 | Msa0367290:five_prime_UTR |
| CAGAGAGAGACCTTGGAGGA+TGG | 0.525442 | 3_1:+62948534 | None:intergenic |
| TCTAGCTGAGAAAGCTCGCT+TGG | 0.528045 | 3_1:-62941925 | Msa0367290:CDS |
| CCTCCGTGTAAATCGCGAAA+GGG | 0.528321 | 3_1:-62943802 | Msa0367290:CDS |
| ATATAAATAACAGATCATAA+AGG | 0.529068 | 3_1:+62941512 | None:intergenic |
| TTCAGATGCCAATCTTGGCA+TGG | 0.533283 | 3_1:-62941703 | Msa0367290:CDS |
| TCCCAGATGTCGCCAACGCA+AGG | 0.538434 | 3_1:-62945126 | Msa0367290:CDS |
| GATTTCGTTGCAGGTTGCAA+TGG | 0.540974 | 3_1:-62943931 | Msa0367290:intron |
| CATCTCTTCTATAGCTGGAA+AGG | 0.547815 | 3_1:-62941580 | Msa0367290:CDS |
| TATTGCTCCTCCATCCTCCA+AGG | 0.548209 | 3_1:-62948544 | Msa0367290:intron |
| AGTTCTTGATCTCCTTGCGT+TGG | 0.549331 | 3_1:+62945114 | None:intergenic |
| CTCTGTCCTACAAAGTTCCC+AGG | 0.551784 | 3_1:+62945195 | None:intergenic |
| ACACCAGAATCTGAAATACC+TGG | 0.553757 | 3_1:-62946795 | Msa0367290:CDS |
| ATATCATCAACTTACGATGC+AGG | 0.555351 | 3_1:-62941847 | Msa0367290:CDS |
| TCAGATGCCAATCTTGGCAT+GGG | 0.561084 | 3_1:-62941702 | Msa0367290:CDS |
| ATATCCTGGCGTAACATCAA+GGG | 0.567253 | 3_1:-62946757 | Msa0367290:CDS |
| TCGATTGGATCCAGAATTCG+AGG | 0.568019 | 3_1:-62948829 | Msa0367290:five_prime_UTR |
| GCGTATAGAAGGAGACAATA+CGG | 0.571739 | 3_1:-62948789 | Msa0367290:CDS |
| GATTCTTCCAGAATCTTCGT+CGG | 0.572050 | 3_1:+62948888 | None:intergenic |
| GGCTGATCTGGCATTTGCAA+AGG | 0.572702 | 3_1:-62943859 | Msa0367290:CDS |
| GAGTTCTGAGGTGATTGTAA+AGG | 0.573419 | 3_1:-62941628 | Msa0367290:CDS |
| GGCATCTGAAGACATTGATA+GGG | 0.575152 | 3_1:+62941716 | None:intergenic |
| AAAACAGAGAGAGACCTTGG+AGG | 0.577477 | 3_1:+62948530 | None:intergenic |
| ACAACAAGGTCACAATATCC+TGG | 0.578035 | 3_1:-62946771 | Msa0367290:CDS |
| CTCGTGAGAATCGCTTTCTG+AGG | 0.578990 | 3_1:-62941881 | Msa0367290:CDS |
| TGAGAATCGCTTTCTGAGGG+AGG | 0.579459 | 3_1:-62941877 | Msa0367290:CDS |
| GTTGCAGGTTGCAATGGCAA+TGG | 0.581158 | 3_1:-62943925 | Msa0367290:intron |
| TTCATCTCCCATATCAGGAA+AGG | 0.581530 | 3_1:-62941658 | Msa0367290:CDS |
| AGAGGAGGGCAATCTCAAAA+GGG | 0.582424 | 3_1:-62945576 | Msa0367290:CDS |
| TCGGGAGTTGAAGACTGTCA+AGG | 0.584666 | 3_1:-62943880 | Msa0367290:CDS |
| GACATCTGGGACCGCAACTG+GGG | 0.584957 | 3_1:+62945138 | None:intergenic |
| TGAAGAACTCTGATGCGACC+GGG | 0.585556 | 3_1:+62948984 | None:intergenic |
| TCTTCTATAGCTGGAAAGGA+CGG | 0.587921 | 3_1:-62941576 | Msa0367290:CDS |
| CTCCGTGTAAATCGCGAAAG+GGG | 0.587932 | 3_1:-62943801 | Msa0367290:CDS |
| TGAAGACATTGATAGGGATG+TGG | 0.588765 | 3_1:+62941722 | None:intergenic |
| AGACGGAGTATTAGAATCGA+GGG | 0.589106 | 3_1:+62941746 | None:intergenic |
| AGATCAAGAACTTCAGCTGA+AGG | 0.589254 | 3_1:-62945103 | Msa0367290:CDS |
| ACTGACGCTTCAGTGTATCA+TGG | 0.589482 | 3_1:+62941353 | None:intergenic |
| AATTCGAATCACTTAGAGGA+GGG | 0.593525 | 3_1:-62945590 | Msa0367290:CDS |
| TCCTCCGTGTAAATCGCGAA+AGG | 0.600826 | 3_1:-62943803 | Msa0367290:CDS |
| AGAATCTTCGTCGGTGACGG+TGG | 0.601747 | 3_1:+62948897 | None:intergenic |
| TGGCGTAACATCAAGGGGAA+AGG | 0.601994 | 3_1:-62946751 | Msa0367290:intron |
| GCTTCGTCTTCGAATAGCGA+AGG | 0.603925 | 3_1:+62948750 | None:intergenic |
| TCGTGAGAATCGCTTTCTGA+GGG | 0.604235 | 3_1:-62941880 | Msa0367290:CDS |
| AATTCTGGATCCAATCGAAA+CGG | 0.606576 | 3_1:+62948834 | None:intergenic |
| GAAAGCAAAATCAATCATTG+AGG | 0.606900 | 3_1:-62946829 | Msa0367290:CDS |
| CACCAGAATCTGAAATACCT+GGG | 0.610375 | 3_1:-62946794 | Msa0367290:CDS |
| AGAGAGACCTTGGAGGATGG+AGG | 0.619651 | 3_1:+62948537 | None:intergenic |
| AAATTGAATGAGCCCAAGAG+TGG | 0.624865 | 3_1:-62946873 | Msa0367290:CDS |
| ATTGATAGGGATGTGGCAGA+CGG | 0.626543 | 3_1:+62941729 | None:intergenic |
| TCGTCGGTGACGGTGGTGAG+TGG | 0.633571 | 3_1:+62948904 | None:intergenic |
| GGATCGATGTGCTCAACTAG+AGG | 0.635385 | 3_1:-62943838 | Msa0367290:CDS |
| CCCTTTCGCGATTTACACGG+AGG | 0.635650 | 3_1:+62943802 | None:intergenic |
| TCGGTGACGGTGGTGAGTGG+TGG | 0.636276 | 3_1:+62948907 | None:intergenic |
| TATCCTGGCGTAACATCAAG+GGG | 0.637290 | 3_1:-62946756 | Msa0367290:CDS |
| CGTTGCAAGAACCCCAGTTG+CGG | 0.640459 | 3_1:-62945149 | Msa0367290:CDS |
| AAAGGATATAAAGAGTTCTG+AGG | 0.642104 | 3_1:-62941640 | Msa0367290:CDS |
| CAGACGGAGTATTAGAATCG+AGG | 0.646425 | 3_1:+62941745 | None:intergenic |
| TTGATGTGATGTAATAAACC+CGG | 0.651997 | 3_1:-62949002 | None:intergenic |
| CACCTCCAAAGATTTACCAA+TGG | 0.660310 | 3_1:+62945490 | None:intergenic |
| AAATTCGAATCACTTAGAGG+AGG | 0.665089 | 3_1:-62945591 | Msa0367290:CDS |
| TCTTCTCTTACTCATATCGG+TGG | 0.669381 | 3_1:-62945515 | Msa0367290:CDS |
| ATAGGAGTAGGTTGAGACCG+CGG | 0.669960 | 3_1:+62948564 | None:intergenic |
| ATGGGATCAGAATTAACAAG+AGG | 0.670588 | 3_1:-62941684 | Msa0367290:CDS |
| CCATCATTACTCGAAGAAGA+CGG | 0.678461 | 3_1:+62948699 | None:intergenic |
| ACTCCAATCTCTCTTCTCCG+CGG | 0.695968 | 3_1:-62948581 | Msa0367290:CDS |
| CGGCACCGTAACGCTCAGCG+CGG | 0.702180 | 3_1:+62948861 | None:intergenic |
| GACGGAGTATTAGAATCGAG+GGG | 0.708812 | 3_1:+62941747 | None:intergenic |
| ATTGGATCCAGAATTCGAGG+AGG | 0.717949 | 3_1:-62948826 | Msa0367290:five_prime_UTR |
| AGGGGCATAATAGGCACTGG+GGG | 0.728448 | 3_1:+62941765 | None:intergenic |
| GTACTTAGACGAGAGCAATG+AGG | 0.740298 | 3_1:-62941817 | Msa0367290:CDS |
| GAGGGGCATAATAGGCACTG+GGG | 0.777820 | 3_1:+62941764 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATAGTTTTTTTAAAGA+TGG | - | chr3_1:62941891-62941910 | Msa0367290:CDS | 10.0% |
| !! | ATTAATATCAAATAAAAAGA+AGG | - | chr3_1:62943814-62943833 | Msa0367290:CDS | 10.0% |
| !! | TTAATATCAAATAAAAAGAA+GGG | - | chr3_1:62943815-62943834 | Msa0367290:CDS | 10.0% |
| !!! | ATAAGTAAATTTCTTTTATA+GGG | + | chr3_1:62943918-62943937 | None:intergenic | 10.0% |
| !!! | TATAAGTAAATTTCTTTTAT+AGG | + | chr3_1:62943919-62943938 | None:intergenic | 10.0% |
| !!! | TGAATAATCAATTTTCAATA+CGG | + | chr3_1:62941300-62941319 | None:intergenic | 15.0% |
| !!! | ATCAAGTACTATTTTTTTAA+TGG | + | chr3_1:62942151-62942170 | None:intergenic | 15.0% |
| !!! | TTTTTCCAAGTTTTTTTTTT+TGG | + | chr3_1:62942365-62942384 | None:intergenic | 15.0% |
| !! | AAAAAAAAAACTTGGAAAAA+TGG | - | chr3_1:62942365-62942384 | Msa0367290:intron | 15.0% |
| !! | TAAACAAAAAAGATAAAGTA+AGG | + | chr3_1:62942934-62942953 | None:intergenic | 15.0% |
| !! | ATCAATAATTAAATAAAGCT+GGG | + | chr3_1:62943035-62943054 | None:intergenic | 15.0% |
| !! | ATCAATAATTAAATAAAGCT+GGG | + | chr3_1:62943035-62943054 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | chr3_1:62944302-62944321 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | chr3_1:62944301-62944320 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | chr3_1:62944210-62944229 | None:intergenic | 15.0% |
| !!! | TAAACTCTTAAATTTTTGAA+CGG | - | chr3_1:62943979-62943998 | Msa0367290:intron | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | chr3_1:62944110-62944129 | Msa0367290:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | chr3_1:62944301-62944320 | Msa0367290:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | chr3_1:62944302-62944321 | Msa0367290:intron | 15.0% |
| !! | ATAAGTAAAAAACTTATAAG+TGG | + | chr3_1:62944810-62944829 | None:intergenic | 15.0% |
| !!! | TTTTAAAAACAAACAACATA+GGG | + | chr3_1:62945276-62945295 | None:intergenic | 15.0% |
| !!! | ATTTTAAAAACAAACAACAT+AGG | + | chr3_1:62945277-62945296 | None:intergenic | 15.0% |
| !!! | CAAATGTTATTTGTAATTTT+AGG | + | chr3_1:62945690-62945709 | None:intergenic | 15.0% |
| !!! | TAATTACAAAATACCTTTTT+TGG | - | chr3_1:62946701-62946720 | Msa0367290:intron | 15.0% |
| !!! | AAATGAAATTTTAGATTAAG+GGG | + | chr3_1:62947865-62947884 | None:intergenic | 15.0% |
| !!! | CAAATGAAATTTTAGATTAA+GGG | + | chr3_1:62947866-62947885 | None:intergenic | 15.0% |
| !! | TTAGTTAAACACATATTATA+TGG | - | chr3_1:62947925-62947944 | Msa0367290:intron | 15.0% |
| !! | CATTAAAATACAGAAAATTT+AGG | + | chr3_1:62948269-62948288 | None:intergenic | 15.0% |
| !! | ATATAAATAACAGATCATAA+AGG | + | chr3_1:62948746-62948765 | None:intergenic | 15.0% |
| !! | ATTGAAAATTGATTATTCAC+CGG | - | chr3_1:62941301-62941320 | Msa0367290:three_prime_UTR | 20.0% |
| !!! | AGTTTTTTTTTTTGGAAACT+CGG | + | chr3_1:62942357-62942376 | None:intergenic | 20.0% |
| !! | AGTTTCCAAAAAAAAAAACT+TGG | - | chr3_1:62942357-62942376 | Msa0367290:intron | 20.0% |
| !! | GAAAAATGGAAAACTATTTA+CGG | - | chr3_1:62942379-62942398 | Msa0367290:intron | 20.0% |
| !! | AAAAATGGAAAACTATTTAC+GGG | - | chr3_1:62942380-62942399 | Msa0367290:intron | 20.0% |
| !!! | ACATACTTAAAAGAACTTTT+TGG | + | chr3_1:62942679-62942698 | None:intergenic | 20.0% |
| !! | CATCAATAATTAAATAAAGC+TGG | + | chr3_1:62943012-62943031 | None:intergenic | 20.0% |
| !! | CATCAATAATTAAATAAAGC+TGG | + | chr3_1:62943012-62943031 | None:intergenic | 20.0% |
| !!! | ATTTTGCATTACAACAAATT+TGG | + | chr3_1:62943100-62943119 | None:intergenic | 20.0% |
| !!! | AGATCTATTTGTTACAATTA+TGG | - | chr3_1:62943137-62943156 | Msa0367290:intron | 20.0% |
| !!! | CTTTTTCTGCAAAAATATTT+TGG | - | chr3_1:62943588-62943607 | Msa0367290:intron | 20.0% |
| !!! | AATATTTTGGTAACATAATG+TGG | - | chr3_1:62943601-62943620 | Msa0367290:intron | 20.0% |
| !! | TTGTATAGATTAGAATGTTA+AGG | - | chr3_1:62943741-62943760 | Msa0367290:intron | 20.0% |
| !!! | AATTTTGCGATAATTTTTTG+CGG | - | chr3_1:62944145-62944164 | Msa0367290:intron | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | chr3_1:62944239-62944258 | Msa0367290:intron | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | chr3_1:62944240-62944259 | Msa0367290:intron | 20.0% |
| !!! | TATCAGTTTTAGATTAGAAA+TGG | - | chr3_1:62944480-62944499 | Msa0367290:intron | 20.0% |
| !!! | TTATTTTTGAACCATGAAAT+TGG | - | chr3_1:62944612-62944631 | Msa0367290:intron | 20.0% |
| !! | ATTTGCTTCATAGAATAAAT+CGG | + | chr3_1:62945450-62945469 | None:intergenic | 20.0% |
| !! | TTAATATATGGTATTTCAAG+AGG | + | chr3_1:62945548-62945567 | None:intergenic | 20.0% |
| !! | AAACACAGATCTTTAATATA+TGG | + | chr3_1:62945560-62945579 | None:intergenic | 20.0% |
| !!! | GTTTTAAACATACATCAATA+TGG | + | chr3_1:62945610-62945629 | None:intergenic | 20.0% |
| !! | AAGACAGAGAATAAAAATAA+TGG | + | chr3_1:62945660-62945679 | None:intergenic | 20.0% |
| !!! | ATATATTTTTGCTTTAGATG+AGG | + | chr3_1:62945792-62945811 | None:intergenic | 20.0% |
| !!! | TAATTTTTGACACAAGTAAT+CGG | - | chr3_1:62945814-62945833 | Msa0367290:intron | 20.0% |
| !! | AGATATTTACAGATGATTAT+AGG | + | chr3_1:62945951-62945970 | None:intergenic | 20.0% |
| !!! | AATAATTTGGTGTTAGTTTT+AGG | - | chr3_1:62946060-62946079 | Msa0367290:intron | 20.0% |
| !! | AAGTACTATATATCCAAAAA+AGG | + | chr3_1:62946717-62946736 | None:intergenic | 20.0% |
| !! | ATGATTGTTGTCTATTAAAT+TGG | - | chr3_1:62946969-62946988 | Msa0367290:intron | 20.0% |
| !!! | GTCAAAATAACATGATTTTT+TGG | + | chr3_1:62947211-62947230 | None:intergenic | 20.0% |
| !! | ATACATAAAGCAGTAAATTA+TGG | + | chr3_1:62947280-62947299 | None:intergenic | 20.0% |
| !! | GAAAACAAGAAAAATGAAAA+TGG | - | chr3_1:62947307-62947326 | Msa0367290:intron | 20.0% |
| !! | AATTGAACTCTGAATATTTA+AGG | + | chr3_1:62947393-62947412 | None:intergenic | 20.0% |
| !!! | AGTTCAATTATTTTAAAGCT+GGG | - | chr3_1:62947404-62947423 | Msa0367290:intron | 20.0% |
| !!! | GCAAATGAAATTTTAGATTA+AGG | + | chr3_1:62947867-62947886 | None:intergenic | 20.0% |
| !!! | GTTTTCTAGATAATATCATA+TGG | - | chr3_1:62947889-62947908 | Msa0367290:intron | 20.0% |
| !! | AAATTAGAGTTGAGAAAAAA+GGG | + | chr3_1:62948021-62948040 | None:intergenic | 20.0% |
| !!! | TTTTTTAGTTACGCAATATA+AGG | + | chr3_1:62948819-62948838 | None:intergenic | 20.0% |
| !! | TAAAGGATCATACCTTTTAT+TGG | - | chr3_1:62942441-62942460 | Msa0367290:intron | 25.0% |
| ! | CATATACAATGGGTATATAT+GGG | - | chr3_1:62942546-62942565 | Msa0367290:intron | 25.0% |
| ! | TATATATGGGCAATTCAAAT+CGG | - | chr3_1:62942559-62942578 | Msa0367290:intron | 25.0% |
| !! | GAAAAAAAATCCCTCTTTTA+AGG | + | chr3_1:62942709-62942728 | None:intergenic | 25.0% |
| ! | AATATACTATAGCAAGAGAA+AGG | + | chr3_1:62942784-62942803 | None:intergenic | 25.0% |
| !! | TTTCTCTTGCTATAGTATAT+TGG | - | chr3_1:62942783-62942802 | Msa0367290:intron | 25.0% |
| !! | TAATTTTGCTAAACATAGTG+CGG | - | chr3_1:62943311-62943330 | Msa0367290:intron | 25.0% |
| !!! | AATATTTTTGCAGAAAAAGC+TGG | + | chr3_1:62943587-62943606 | None:intergenic | 25.0% |
| !! | AGATATTTTCCTGAAAAAGT+TGG | - | chr3_1:62943716-62943735 | Msa0367290:intron | 25.0% |
| !!! | TATACAATTCCAACTTTTTC+AGG | + | chr3_1:62943728-62943747 | None:intergenic | 25.0% |
| !!! | TACAAAGTCGCTATTTTATA+GGG | + | chr3_1:62943858-62943877 | None:intergenic | 25.0% |
| !!! | TTACAAAGTCGCTATTTTAT+AGG | + | chr3_1:62943859-62943878 | None:intergenic | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | chr3_1:62943950-62943969 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | chr3_1:62943951-62943970 | None:intergenic | 25.0% |
| ! | AGTGCAGAAAAACAAAATTA+GGG | - | chr3_1:62944273-62944292 | Msa0367290:intron | 25.0% |
| ! | ATTAACCCTAAAAAGAAAGA+AGG | - | chr3_1:62944368-62944387 | Msa0367290:intron | 25.0% |
| !! | TTTCTCCTTCTTTCTTTTTA+GGG | + | chr3_1:62944376-62944395 | None:intergenic | 25.0% |
| !! | ATTTCTCCTTCTTTCTTTTT+AGG | + | chr3_1:62944377-62944396 | None:intergenic | 25.0% |
| ! | GAAGGAGAAATACATATAAA+AGG | - | chr3_1:62944386-62944405 | Msa0367290:intron | 25.0% |
| ! | GAGAAATACATATAAAAGGA+AGG | - | chr3_1:62944390-62944409 | Msa0367290:intron | 25.0% |
| ! | ATACATATAAAAGGAAGGTA+AGG | - | chr3_1:62944395-62944414 | Msa0367290:intron | 25.0% |
| !! | TTCTAATCTAAAACTGATAC+TGG | + | chr3_1:62944479-62944498 | None:intergenic | 25.0% |
| ! | ATATTAGCAGAACATCAAAT+GGG | - | chr3_1:62944519-62944538 | Msa0367290:intron | 25.0% |
| ! | TTAAGCGAAAATGATGTATA+TGG | + | chr3_1:62944548-62944567 | None:intergenic | 25.0% |
| ! | TCTAATCCCTTAATAATTGT+CGG | + | chr3_1:62944710-62944729 | None:intergenic | 25.0% |
| !! | TTTTTACTTATGCAATAGAC+AGG | - | chr3_1:62944819-62944838 | Msa0367290:intron | 25.0% |
| !! | TTTTACTTATGCAATAGACA+GGG | - | chr3_1:62944820-62944839 | Msa0367290:intron | 25.0% |
| ! | ACTCAGAAGTTCAAAATAAT+AGG | + | chr3_1:62944888-62944907 | None:intergenic | 25.0% |
| !! | GTTTTACAATTGTTGAGAAT+AGG | - | chr3_1:62944992-62945011 | Msa0367290:intron | 25.0% |
| ! | AAAACACATGCAAAAATTTG+AGG | + | chr3_1:62945308-62945327 | None:intergenic | 25.0% |
| !! | ATTATACTGCATTTTTGTGT+TGG | - | chr3_1:62945334-62945353 | Msa0367290:intron | 25.0% |
| ! | ATGAAGCAAATACATAGATA+TGG | - | chr3_1:62945459-62945478 | Msa0367290:intron | 25.0% |
| !! | TCTAATTTTCTGATGACAAA+GGG | - | chr3_1:62945755-62945774 | Msa0367290:intron | 25.0% |
| ! | GATATATTGAATGAAACTAG+AGG | + | chr3_1:62945861-62945880 | None:intergenic | 25.0% |
| ! | TAATCATCTGTAAATATCTG+AGG | - | chr3_1:62945952-62945971 | Msa0367290:intron | 25.0% |
| !! | TTTTTACGGCTCTTATATTT+TGG | - | chr3_1:62946107-62946126 | Msa0367290:intron | 25.0% |
| !!! | TCTTTCTCATGGTTTTTTTA+AGG | - | chr3_1:62946171-62946190 | Msa0367290:intron | 25.0% |
| !!! | TCATGGTTTTTTTAAGGTAA+CGG | - | chr3_1:62946177-62946196 | Msa0367290:intron | 25.0% |
| ! | TGTTGTCTATTAAATTGGTA+TGG | - | chr3_1:62946974-62946993 | Msa0367290:intron | 25.0% |
| ! | GTTGTCTATTAAATTGGTAT+GGG | - | chr3_1:62946975-62946994 | Msa0367290:intron | 25.0% |
| !! | GAAAAATGAAAATGGCATTT+TGG | - | chr3_1:62947315-62947334 | Msa0367290:intron | 25.0% |
| !!! | GAGTTCAATTATTTTAAAGC+TGG | - | chr3_1:62947403-62947422 | Msa0367290:intron | 25.0% |
| !!! | GTTCAATTATTTTAAAGCTG+GGG | - | chr3_1:62947405-62947424 | Msa0367290:intron | 25.0% |
| !!! | CTATTTCTATACATGGATTT+TGG | - | chr3_1:62947574-62947593 | Msa0367290:intron | 25.0% |
| ! | GAAATTAGAGTTGAGAAAAA+AGG | + | chr3_1:62948022-62948041 | None:intergenic | 25.0% |
| ! | AACTTTATAGTTCCACATTT+GGG | + | chr3_1:62948122-62948141 | None:intergenic | 25.0% |
| ! | AAACTTTATAGTTCCACATT+TGG | + | chr3_1:62948123-62948142 | None:intergenic | 25.0% |
| !!! | TTTTTGAAAACAACACAATG+TGG | + | chr3_1:62948212-62948231 | None:intergenic | 25.0% |
| ! | TTTATATCCTTTCCTGATAT+GGG | + | chr3_1:62948607-62948626 | None:intergenic | 25.0% |
| ! | ATTGCGTAACTAAAAAAGAA+CGG | - | chr3_1:62948822-62948841 | Msa0367290:five_prime_UTR | 25.0% |
| ! | AATTTTCAATGGCGTATAGA+AGG | - | chr3_1:62941455-62941474 | Msa0367290:three_prime_UTR | 30.0% |
| ACGGTGTAATAATTGGATTA+GGG | + | chr3_1:62941540-62941559 | None:intergenic | 30.0% | |
| GATGGAAGAAAATTAGTTAG+AGG | - | chr3_1:62941909-62941928 | Msa0367290:CDS | 30.0% | |
| AGTTGAAGAGATAGAGAAAT+TGG | - | chr3_1:62941956-62941975 | Msa0367290:intron | 30.0% | |
| TCAAAGACTACCTAATATGT+GGG | + | chr3_1:62942326-62942345 | None:intergenic | 30.0% | |
| ! | TATGCAGTGCATTTGTTAAA+GGG | + | chr3_1:62942416-62942435 | None:intergenic | 30.0% |
| GCATATACAATGGGTATATA+TGG | - | chr3_1:62942545-62942564 | Msa0367290:intron | 30.0% | |
| ATGTATAGATGCCTTAAAAG+AGG | - | chr3_1:62942695-62942714 | Msa0367290:intron | 30.0% | |
| TGTATAGATGCCTTAAAAGA+GGG | - | chr3_1:62942696-62942715 | Msa0367290:intron | 30.0% | |
| TTCTTGTTGCATGAATTCTT+TGG | - | chr3_1:62942957-62942976 | Msa0367290:intron | 30.0% | |
| ! | CATTACAACAAATTTGGAAC+TGG | + | chr3_1:62943094-62943113 | None:intergenic | 30.0% |
| GAAAGCAAAATCAATCATTG+AGG | - | chr3_1:62943426-62943445 | Msa0367290:intron | 30.0% | |
| CAAGATTAGAACACTATGAA+AGG | - | chr3_1:62944013-62944032 | Msa0367290:intron | 30.0% | |
| CAGTGCAGAAAAACAAAATT+AGG | - | chr3_1:62944272-62944291 | Msa0367290:intron | 30.0% | |
| !! | TTACAAGGTCGCTATTTTAT+AGG | - | chr3_1:62944332-62944351 | Msa0367290:intron | 30.0% |
| !! | TACAAGGTCGCTATTTTATA+GGG | - | chr3_1:62944333-62944352 | Msa0367290:intron | 30.0% |
| TATAAAAGGAAGGTAAGGAA+AGG | - | chr3_1:62944400-62944419 | Msa0367290:intron | 30.0% | |
| GATATTAGCAGAACATCAAA+TGG | - | chr3_1:62944518-62944537 | Msa0367290:intron | 30.0% | |
| TATTAGCAGAACATCAAATG+GGG | - | chr3_1:62944520-62944539 | Msa0367290:intron | 30.0% | |
| ACATCTTCTCTTACTCATAT+CGG | - | chr3_1:62944737-62944756 | Msa0367290:intron | 30.0% | |
| ! | CTTTTTCCTGATATGTTTAC+GGG | + | chr3_1:62945040-62945059 | None:intergenic | 30.0% |
| !! | GCTTTTTCCTGATATGTTTA+CGG | + | chr3_1:62945041-62945060 | None:intergenic | 30.0% |
| !!! | CTGTGTATCACTTTTTAATG+TGG | - | chr3_1:62945198-62945217 | Msa0367290:CDS | 30.0% |
| AAGAATTGTGATGCTATCAA+AGG | - | chr3_1:62945397-62945416 | Msa0367290:intron | 30.0% | |
| CATGAATCATTCCTATATTG+AGG | + | chr3_1:62945423-62945442 | None:intergenic | 30.0% | |
| CTCAATATAGGAATGATTCA+TGG | - | chr3_1:62945421-62945440 | Msa0367290:intron | 30.0% | |
| !!! | TTCAAGAGGTACTTATGTTT+TGG | + | chr3_1:62945534-62945553 | None:intergenic | 30.0% |
| GAGTAGTAAATAATTGTGCT+GGG | + | chr3_1:62945737-62945756 | None:intergenic | 30.0% | |
| AGAGTAGTAAATAATTGTGC+TGG | + | chr3_1:62945738-62945757 | None:intergenic | 30.0% | |
| ! | CTCTAATTTTCTGATGACAA+AGG | - | chr3_1:62945754-62945773 | Msa0367290:intron | 30.0% |
| AGATTGAACTAGTGATTAGA+AGG | + | chr3_1:62945907-62945926 | None:intergenic | 30.0% | |
| GAGTGATGGTACTAATAATT+TGG | - | chr3_1:62946047-62946066 | Msa0367290:intron | 30.0% | |
| !!! | TCACTCTCACTCTTTTTTTA+CGG | - | chr3_1:62946093-62946112 | Msa0367290:intron | 30.0% |
| ! | TCATTTTCTTGTCTTTCTCA+TGG | - | chr3_1:62946160-62946179 | Msa0367290:intron | 30.0% |
| ATACCAAATCATCATCATCT+TGG | + | chr3_1:62946486-62946505 | None:intergenic | 30.0% | |
| AGAGAAGTCAACAAACAAAA+AGG | + | chr3_1:62946513-62946532 | None:intergenic | 30.0% | |
| CGATAGTTGTTTATATCACA+GGG | + | chr3_1:62946627-62946646 | None:intergenic | 30.0% | |
| AGTACAAAATATTGGGAGTT+TGG | + | chr3_1:62946744-62946763 | None:intergenic | 30.0% | |
| CTTCACGAGTACAAAATATT+GGG | + | chr3_1:62946751-62946770 | None:intergenic | 30.0% | |
| ! | GTCACAGTTTAAAGTATTCT+TGG | - | chr3_1:62946940-62946959 | Msa0367290:intron | 30.0% |
| TCTTACTACTCAAAGAGAAT+AGG | + | chr3_1:62947069-62947088 | None:intergenic | 30.0% | |
| AAAACCAAATGTCAAAGAGT+TGG | - | chr3_1:62947101-62947120 | Msa0367290:intron | 30.0% | |
| ! | TTTGGTAGTTAGTGAAAACA+AGG | - | chr3_1:62947333-62947352 | Msa0367290:intron | 30.0% |
| ! | ATATTTAAGGCCTATTTGGT+TGG | + | chr3_1:62947380-62947399 | None:intergenic | 30.0% |
| ! | CTGAATATTTAAGGCCTATT+TGG | + | chr3_1:62947384-62947403 | None:intergenic | 30.0% |
| AAGTCCAATAGAAATGATGT+TGG | - | chr3_1:62947535-62947554 | Msa0367290:intron | 30.0% | |
| !! | GGTCAAACTATTTCTATACA+TGG | - | chr3_1:62947567-62947586 | Msa0367290:intron | 30.0% |
| CTTATACAGAGCTAATACAA+AGG | + | chr3_1:62947704-62947723 | None:intergenic | 30.0% | |
| TCCAAAAGACTAGATGTATT+TGG | - | chr3_1:62947956-62947975 | Msa0367290:intron | 30.0% | |
| !! | TCCAAATACATCTAGTCTTT+TGG | + | chr3_1:62947960-62947979 | None:intergenic | 30.0% |
| AATAGAGGTTAACATAGGAA+GGG | + | chr3_1:62947985-62948004 | None:intergenic | 30.0% | |
| CAAACAATAGAGGTTAACAT+AGG | + | chr3_1:62947990-62948009 | None:intergenic | 30.0% | |
| !! | GTCAATTGATTTGGTTATTC+AGG | - | chr3_1:62948180-62948199 | Msa0367290:intron | 30.0% |
| CTTTATATCCTTTCCTGATA+TGG | + | chr3_1:62948608-62948627 | None:intergenic | 30.0% | |
| AAAGGATATAAAGAGTTCTG+AGG | - | chr3_1:62948615-62948634 | Msa0367290:CDS | 30.0% | |
| ! | TTGCTCGTTTTATATATCGT+GGG | - | chr3_1:62948767-62948786 | Msa0367290:CDS | 30.0% |
| !! | ATTATTCACCGGTTCATGAT+CGG | - | chr3_1:62941312-62941331 | Msa0367290:three_prime_UTR | 35.0% |
| AATTCTGGATCCAATCGAAA+CGG | + | chr3_1:62941424-62941443 | None:intergenic | 35.0% | |
| GACGGTGTAATAATTGGATT+AGG | + | chr3_1:62941541-62941560 | None:intergenic | 35.0% | |
| GAAGAAGACGGTGTAATAAT+TGG | + | chr3_1:62941547-62941566 | None:intergenic | 35.0% | |
| AAAAAAACAGAGAGAGACCT+TGG | + | chr3_1:62941731-62941750 | None:intergenic | 35.0% | |
| !! | TCAAAGGTACTCAATTGCAA+GGG | - | chr3_1:62942022-62942041 | Msa0367290:intron | 35.0% |
| TGAGCTAAGAGAAAAAGAGT+TGG | - | chr3_1:62942066-62942085 | Msa0367290:intron | 35.0% | |
| AACATAAAATGTTGGCACCT+GGG | + | chr3_1:62942249-62942268 | None:intergenic | 35.0% | |
| AAACATAAAATGTTGGCACC+TGG | + | chr3_1:62942250-62942269 | None:intergenic | 35.0% | |
| ! | AGGTGCCAACATTTTATGTT+TGG | - | chr3_1:62942249-62942268 | Msa0367290:intron | 35.0% |
| ! | GGTGCCAACATTTTATGTTT+GGG | - | chr3_1:62942250-62942269 | Msa0367290:intron | 35.0% |
| AAAGACTACCTAATATGTGG+GGG | + | chr3_1:62942324-62942343 | None:intergenic | 35.0% | |
| CAAAGACTACCTAATATGTG+GGG | + | chr3_1:62942325-62942344 | None:intergenic | 35.0% | |
| CTCAAAGACTACCTAATATG+TGG | + | chr3_1:62942327-62942346 | None:intergenic | 35.0% | |
| !!! | TTTTTTGGAAACTCGGTATC+TGG | + | chr3_1:62942350-62942369 | None:intergenic | 35.0% |
| ! | GTATGCAGTGCATTTGTTAA+AGG | + | chr3_1:62942417-62942436 | None:intergenic | 35.0% |
| TTAACAAATGCACTGCATAC+TGG | - | chr3_1:62942417-62942436 | Msa0367290:intron | 35.0% | |
| GGCAACAATATGCCAATAAA+AGG | + | chr3_1:62942456-62942475 | None:intergenic | 35.0% | |
| TCAAATCGGCATCAACTTTA+AGG | - | chr3_1:62942573-62942592 | Msa0367290:intron | 35.0% | |
| TTAGCGAAAACCTATGAGTT+TGG | - | chr3_1:62942599-62942618 | Msa0367290:intron | 35.0% | |
| ACTTCAACACTGTAACTTCT+AGG | + | chr3_1:62942731-62942750 | None:intergenic | 35.0% | |
| ! | ATGAAGGTCTTCTAAGGATT+TGG | + | chr3_1:62942846-62942865 | None:intergenic | 35.0% |
| ACATTGCTTTGCTCATATGA+AGG | + | chr3_1:62942862-62942881 | None:intergenic | 35.0% | |
| ! | ATTTGGAACTGGAGTTGTAT+GGG | + | chr3_1:62943083-62943102 | None:intergenic | 35.0% |
| ! | AATTTGGAACTGGAGTTGTA+TGG | + | chr3_1:62943084-62943103 | None:intergenic | 35.0% |
| GAAGATTCAAAATGCATGTG+TGG | - | chr3_1:62943202-62943221 | Msa0367290:intron | 35.0% | |
| AGTGCGGTGTTTGTAAATAT+AGG | - | chr3_1:62943327-62943346 | Msa0367290:intron | 35.0% | |
| ATCAATGAATCCTATCTCTG+AGG | + | chr3_1:62943556-62943575 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+AGG | - | chr3_1:62944317-62944336 | Msa0367290:intron | 35.0% | |
| ATTAGCAGAACATCAAATGG+GGG | - | chr3_1:62944521-62944540 | Msa0367290:intron | 35.0% | |
| ! | CCTCTAAGTGATTCGAATTT+TGG | + | chr3_1:62944664-62944683 | None:intergenic | 35.0% |
| CCAAAATTCGAATCACTTAG+AGG | - | chr3_1:62944661-62944680 | Msa0367290:intron | 35.0% | |
| AAATTCGAATCACTTAGAGG+AGG | - | chr3_1:62944664-62944683 | Msa0367290:intron | 35.0% | |
| AATTCGAATCACTTAGAGGA+GGG | - | chr3_1:62944665-62944684 | Msa0367290:intron | 35.0% | |
| GACAGTCCGACAATTATTAA+GGG | - | chr3_1:62944701-62944720 | Msa0367290:intron | 35.0% | |
| TTATGGGAATGTGTTACAGT+AGG | - | chr3_1:62944849-62944868 | Msa0367290:intron | 35.0% | |
| AAGCATATCCTTATGGAAGA+GGG | + | chr3_1:62944931-62944950 | None:intergenic | 35.0% | |
| AAAGCATATCCTTATGGAAG+AGG | + | chr3_1:62944932-62944951 | None:intergenic | 35.0% | |
| GATCACAAAGCATATCCTTA+TGG | + | chr3_1:62944938-62944957 | None:intergenic | 35.0% | |
| TAGGACTTCAGATATCATTC+AGG | - | chr3_1:62945011-62945030 | Msa0367290:intron | 35.0% | |
| AAACATATCAGGAAAAAGCC+TGG | - | chr3_1:62945042-62945061 | Msa0367290:intron | 35.0% | |
| AACATATCAGGAAAAAGCCT+GGG | - | chr3_1:62945043-62945062 | Msa0367290:intron | 35.0% | |
| GATCTGTGTTTGTTTGTACA+CGG | - | chr3_1:62945569-62945588 | Msa0367290:CDS | 35.0% | |
| TGTTTGTTTGTACACGGATA+TGG | - | chr3_1:62945575-62945594 | Msa0367290:CDS | 35.0% | |
| !! | AGAGGAAAGAAGCATCATTT+AGG | + | chr3_1:62945843-62945862 | None:intergenic | 35.0% |
| TTAGAAGGTCAATAGATAGC+TGG | + | chr3_1:62945892-62945911 | None:intergenic | 35.0% | |
| GTAAAAAAAGAGTGAGAGTG+AGG | + | chr3_1:62946094-62946113 | None:intergenic | 35.0% | |
| !!! | TTGAAGCATTTTTTGCCATC+TGG | - | chr3_1:62946302-62946321 | Msa0367290:intron | 35.0% |
| ! | TAGCCAAGATGATGATGATT+TGG | - | chr3_1:62946480-62946499 | Msa0367290:intron | 35.0% |
| GCGATAGTTGTTTATATCAC+AGG | + | chr3_1:62946628-62946647 | None:intergenic | 35.0% | |
| CCTTCACGAGTACAAAATAT+TGG | + | chr3_1:62946752-62946771 | None:intergenic | 35.0% | |
| ! | CCAATATTTTGTACTCGTGA+AGG | - | chr3_1:62946749-62946768 | Msa0367290:intron | 35.0% |
| GTCTATTAAATTGGTATGGG+TGG | - | chr3_1:62946978-62946997 | Msa0367290:intron | 35.0% | |
| CAAATGTCAAAGAGTTGGAT+GGG | - | chr3_1:62947106-62947125 | Msa0367290:intron | 35.0% | |
| AAATGTCAAAGAGTTGGATG+GGG | - | chr3_1:62947107-62947126 | Msa0367290:intron | 35.0% | |
| AATGTGTTGTCAAACCAAAG+AGG | + | chr3_1:62947147-62947166 | None:intergenic | 35.0% | |
| GGTTTGACTATACCCTAAAT+TGG | - | chr3_1:62947426-62947445 | Msa0367290:intron | 35.0% | |
| GAAACAGAGAAGCCAATTTA+GGG | + | chr3_1:62947441-62947460 | None:intergenic | 35.0% | |
| TGAAACAGAGAAGCCAATTT+AGG | + | chr3_1:62947442-62947461 | None:intergenic | 35.0% | |
| ATGGCCAACATCATTTCTAT+TGG | + | chr3_1:62947542-62947561 | None:intergenic | 35.0% | |
| GAAATAGTTTGACCATCTCA+TGG | + | chr3_1:62947561-62947580 | None:intergenic | 35.0% | |
| TCACAAACTTCAGAGAATCA+TGG | + | chr3_1:62947666-62947685 | None:intergenic | 35.0% | |
| CAATAGAGGTTAACATAGGA+AGG | + | chr3_1:62947986-62948005 | None:intergenic | 35.0% | |
| GGAGTAAGTACAAACAATAG+AGG | + | chr3_1:62948000-62948019 | None:intergenic | 35.0% | |
| TCTTTACGAGTGTCTTCAAA+GGG | + | chr3_1:62948085-62948104 | None:intergenic | 35.0% | |
| TTCTTTACGAGTGTCTTCAA+AGG | + | chr3_1:62948086-62948105 | None:intergenic | 35.0% | |
| AACACCGAATTATAAACCAG+AGG | + | chr3_1:62948158-62948177 | None:intergenic | 35.0% | |
| ! | CGGTGTTAAGTCAATTGATT+TGG | - | chr3_1:62948171-62948190 | Msa0367290:intron | 35.0% |
| TTAGGTGAAATGAGTAGTGT+TGG | + | chr3_1:62948251-62948270 | None:intergenic | 35.0% | |
| ATATCATCAACTTACGATGC+AGG | - | chr3_1:62948408-62948427 | Msa0367290:intron | 35.0% | |
| ATGGGATCAGAATTAACAAG+AGG | - | chr3_1:62948571-62948590 | Msa0367290:CDS | 35.0% | |
| ! | GTTGCTCGTTTTATATATCG+TGG | - | chr3_1:62948766-62948785 | Msa0367290:CDS | 35.0% |
| TGCATTTAGTGCTTGTCAAA+CGG | - | chr3_1:62948948-62948967 | Msa0367290:five_prime_UTR | 35.0% | |
| GATTCTTCCAGAATCTTCGT+CGG | + | chr3_1:62941370-62941389 | None:intergenic | 40.0% | |
| GATCCAATCGAAACGGTTAT+CGG | + | chr3_1:62941417-62941436 | None:intergenic | 40.0% | |
| AATTCAACCTCCTCGAATTC+TGG | + | chr3_1:62941439-62941458 | None:intergenic | 40.0% | |
| ! | CGAGGAGGTTGAATTTTCAA+TGG | - | chr3_1:62941444-62941463 | Msa0367290:three_prime_UTR | 40.0% |
| GCGTATAGAAGGAGACAATA+CGG | - | chr3_1:62941466-62941485 | Msa0367290:three_prime_UTR | 40.0% | |
| CCATCATTACTCGAAGAAGA+CGG | + | chr3_1:62941559-62941578 | None:intergenic | 40.0% | |
| CGTTGACACTTCTTCAACTT+CGG | - | chr3_1:62941579-62941598 | Msa0367290:CDS | 40.0% | |
| TTTGACACACAGAGAAACAG+GGG | + | chr3_1:62942007-62942026 | None:intergenic | 40.0% | |
| CTTTGACACACAGAGAAACA+GGG | + | chr3_1:62942008-62942027 | None:intergenic | 40.0% | |
| !! | GTCAAAGGTACTCAATTGCA+AGG | - | chr3_1:62942021-62942040 | Msa0367290:intron | 40.0% |
| !! | CAAAGGTACTCAATTGCAAG+GGG | - | chr3_1:62942023-62942042 | Msa0367290:intron | 40.0% |
| !! | AAAGGTACTCAATTGCAAGG+GGG | - | chr3_1:62942024-62942043 | Msa0367290:intron | 40.0% |
| GCTAAGAGAAAAAGAGTTGG+AGG | - | chr3_1:62942069-62942088 | Msa0367290:intron | 40.0% | |
| AGAAAAAGAGTTGGAGGTTC+TGG | - | chr3_1:62942075-62942094 | Msa0367290:intron | 40.0% | |
| GAAAAAGAGTTGGAGGTTCT+GGG | - | chr3_1:62942076-62942095 | Msa0367290:intron | 40.0% | |
| GTTTCATGTTCAATTACCCC+AGG | - | chr3_1:62942229-62942248 | Msa0367290:intron | 40.0% | |
| ACATAAAATGTTGGCACCTG+GGG | + | chr3_1:62942248-62942267 | None:intergenic | 40.0% | |
| CTGGCCCAAACATAAAATGT+TGG | + | chr3_1:62942257-62942276 | None:intergenic | 40.0% | |
| AACCAAAGGTTTGTAGAGAC+TGG | + | chr3_1:62942276-62942295 | None:intergenic | 40.0% | |
| GTCTCTACAAACCTTTGGTT+TGG | - | chr3_1:62942276-62942295 | Msa0367290:intron | 40.0% | |
| AAGACTACCTAATATGTGGG+GGG | + | chr3_1:62942323-62942342 | None:intergenic | 40.0% | |
| ! | ATGCACTGCATACTGGTTAA+AGG | - | chr3_1:62942424-62942443 | Msa0367290:intron | 40.0% |
| CCCATTGTATATGCTACACA+GGG | + | chr3_1:62942539-62942558 | None:intergenic | 40.0% | |
| CCCTGTGTAGCATATACAAT+GGG | - | chr3_1:62942536-62942555 | Msa0367290:intron | 40.0% | |
| ACCCATTGTATATGCTACAC+AGG | + | chr3_1:62942540-62942559 | None:intergenic | 40.0% | |
| AGAAGCTAGTCCAAACTCAT+AGG | + | chr3_1:62942612-62942631 | None:intergenic | 40.0% | |
| !! | TTGGACTAGCTTCTAGTTGA+TGG | - | chr3_1:62942618-62942637 | Msa0367290:intron | 40.0% |
| !! | TGGACTAGCTTCTAGTTGAT+GGG | - | chr3_1:62942619-62942638 | Msa0367290:intron | 40.0% |
| CTAAGGATTTGGAGGCAATA+GGG | + | chr3_1:62942835-62942854 | None:intergenic | 40.0% | |
| TCTAAGGATTTGGAGGCAAT+AGG | + | chr3_1:62942836-62942855 | None:intergenic | 40.0% | |
| ! | AAGGTCTTCTAAGGATTTGG+AGG | + | chr3_1:62942843-62942862 | None:intergenic | 40.0% |
| GCTCATATGAAGGTCTTCTA+AGG | + | chr3_1:62942852-62942871 | None:intergenic | 40.0% | |
| ! | TGTCTGTGACTATTTCTCTG+AGG | - | chr3_1:62942905-62942924 | Msa0367290:intron | 40.0% |
| ACAACCTAAAGCTATTGCTG+AGG | - | chr3_1:62943164-62943183 | Msa0367290:intron | 40.0% | |
| AAATTGAATGAGCCCAAGAG+TGG | - | chr3_1:62943382-62943401 | Msa0367290:intron | 40.0% | |
| ! | ACACCAGAATCTGAAATACC+TGG | - | chr3_1:62943460-62943479 | Msa0367290:intron | 40.0% |
| ! | CACCAGAATCTGAAATACCT+GGG | - | chr3_1:62943461-62943480 | Msa0367290:intron | 40.0% |
| ACAACAAGGTCACAATATCC+TGG | - | chr3_1:62943484-62943503 | Msa0367290:intron | 40.0% | |
| AATATCCTGGCGTAACATCA+AGG | - | chr3_1:62943497-62943516 | Msa0367290:intron | 40.0% | |
| ATATCCTGGCGTAACATCAA+GGG | - | chr3_1:62943498-62943517 | Msa0367290:intron | 40.0% | |
| ! | TTGGTAACATAATGTGGTCG+TGG | - | chr3_1:62943607-62943626 | Msa0367290:intron | 40.0% |
| TGGTAACATAATGTGGTCGT+GGG | - | chr3_1:62943608-62943627 | Msa0367290:intron | 40.0% | |
| TTAGCAGAACATCAAATGGG+GGG | - | chr3_1:62944522-62944541 | Msa0367290:intron | 40.0% | |
| GACACTAGCATCCAATTTCA+TGG | + | chr3_1:62944626-62944645 | None:intergenic | 40.0% | |
| GGACAGTCCGACAATTATTA+AGG | - | chr3_1:62944700-62944719 | Msa0367290:intron | 40.0% | |
| TCTTCTCTTACTCATATCGG+TGG | - | chr3_1:62944740-62944759 | Msa0367290:intron | 40.0% | |
| TGGCACCATTGGTAAATCTT+TGG | - | chr3_1:62944760-62944779 | Msa0367290:intron | 40.0% | |
| CACCATTGGTAAATCTTTGG+AGG | - | chr3_1:62944763-62944782 | Msa0367290:intron | 40.0% | |
| CACCTCCAAAGATTTACCAA+TGG | + | chr3_1:62944768-62944787 | None:intergenic | 40.0% | |
| ACTTATGCAATAGACAGGGA+TGG | - | chr3_1:62944824-62944843 | Msa0367290:intron | 40.0% | |
| CTTATGCAATAGACAGGGAT+GGG | - | chr3_1:62944825-62944844 | Msa0367290:intron | 40.0% | |
| AATAGACAGGGATGGGATTA+TGG | - | chr3_1:62944832-62944851 | Msa0367290:intron | 40.0% | |
| ATAGACAGGGATGGGATTAT+GGG | - | chr3_1:62944833-62944852 | Msa0367290:intron | 40.0% | |
| TATCCTTATGGAAGAGGGAA+AGG | + | chr3_1:62944926-62944945 | None:intergenic | 40.0% | |
| AGGAAACCCGTAAACATATC+AGG | - | chr3_1:62945031-62945050 | Msa0367290:intron | 40.0% | |
| AAAAAGCCTGGGAACTTTGT+AGG | - | chr3_1:62945054-62945073 | Msa0367290:intron | 40.0% | |
| GTTCTTGCAACGTTGTAGAA+TGG | + | chr3_1:62945098-62945117 | None:intergenic | 40.0% | |
| AGATCAAGAACTTCAGCTGA+AGG | - | chr3_1:62945152-62945171 | Msa0367290:CDS | 40.0% | |
| ! | ATGTGGTAAAAGTACACGTG+TGG | - | chr3_1:62945215-62945234 | Msa0367290:CDS | 40.0% |
| AGTACACGTGTGGTTAAGTA+CGG | - | chr3_1:62945225-62945244 | Msa0367290:CDS | 40.0% | |
| GCTATCAAAGGCCTCAATAT+AGG | - | chr3_1:62945409-62945428 | Msa0367290:intron | 40.0% | |
| AGATGGACCTAGGAAAACTA+TGG | + | chr3_1:62945997-62946016 | None:intergenic | 40.0% | |
| ! | GTTTTCCTAGGTCCATCTTA+CGG | - | chr3_1:62945999-62946018 | Msa0367290:intron | 40.0% |
| ! | TACCATCACTCTTGTTTCAG+CGG | + | chr3_1:62946038-62946057 | None:intergenic | 40.0% |
| CCAAAGCAAAACTGCTTCTT+CGG | - | chr3_1:62946356-62946375 | Msa0367290:intron | 40.0% | |
| CAAAGCAAAACTGCTTCTTC+GGG | - | chr3_1:62946357-62946376 | Msa0367290:intron | 40.0% | |
| TCTATCTCACGCAAAGACAA+GGG | + | chr3_1:62946554-62946573 | None:intergenic | 40.0% | |
| TTCTATCTCACGCAAAGACA+AGG | + | chr3_1:62946555-62946574 | None:intergenic | 40.0% | |
| TTGCGTGAGATAGAAGTTGA+TGG | - | chr3_1:62946560-62946579 | Msa0367290:intron | 40.0% | |
| !! | ACCATCGATTACTTTTGCTG+TGG | - | chr3_1:62946674-62946693 | Msa0367290:intron | 40.0% |
| ACCACAGCAAAAGTAATCGA+TGG | + | chr3_1:62946678-62946697 | None:intergenic | 40.0% | |
| AATCTACTTCAAGCCCCATA+TGG | - | chr3_1:62946789-62946808 | Msa0367290:CDS | 40.0% | |
| TATTTAATGCTACCCCTGCA+GGG | - | chr3_1:62946836-62946855 | Msa0367290:CDS | 40.0% | |
| ! | TGATGTTGCCTGCTTCTTTT+CGG | - | chr3_1:62946900-62946919 | Msa0367290:CDS | 40.0% |
| TTAAATTGGTATGGGTGGAG+AGG | - | chr3_1:62946983-62947002 | Msa0367290:intron | 40.0% | |
| TAAATTGGTATGGGTGGAGA+GGG | - | chr3_1:62946984-62947003 | Msa0367290:intron | 40.0% | |
| CCATCCAACTCTTTGACATT+TGG | + | chr3_1:62947108-62947127 | None:intergenic | 40.0% | |
| CCAAATGTCAAAGAGTTGGA+TGG | - | chr3_1:62947105-62947124 | Msa0367290:intron | 40.0% | |
| TTGGATGGGGCTGTAATATA+GGG | - | chr3_1:62947120-62947139 | Msa0367290:intron | 40.0% | |
| AGCTTCTTCTCCAACCAAAT+AGG | - | chr3_1:62947367-62947386 | Msa0367290:intron | 40.0% | |
| AAATGATGTTGGCCATGAGA+TGG | - | chr3_1:62947546-62947565 | Msa0367290:intron | 40.0% | |
| GCATAAAGTGTACTGTGCAA+AGG | - | chr3_1:62947617-62947636 | Msa0367290:intron | 40.0% | |
| TAAAGTGTACTGTGCAAAGG+TGG | - | chr3_1:62947620-62947639 | Msa0367290:intron | 40.0% | |
| AAAGTGTACTGTGCAAAGGT+GGG | - | chr3_1:62947621-62947640 | Msa0367290:intron | 40.0% | |
| CTTTACGAGTGTCTTCAAAG+GGG | + | chr3_1:62948084-62948103 | None:intergenic | 40.0% | |
| CACATTTGGGTAAAGCTTCT+TGG | + | chr3_1:62948109-62948128 | None:intergenic | 40.0% | |
| CAAGAAGCTTTACCCAAATG+TGG | - | chr3_1:62948107-62948126 | Msa0367290:intron | 40.0% | |
| CCGAATTATAAACCAGAGGT+GGG | + | chr3_1:62948154-62948173 | None:intergenic | 40.0% | |
| ! | CCCACCTCTGGTTTATAATT+CGG | - | chr3_1:62948151-62948170 | Msa0367290:intron | 40.0% |
| ACCGAATTATAAACCAGAGG+TGG | + | chr3_1:62948155-62948174 | None:intergenic | 40.0% | |
| AGTTGCAGTCGTATCTGTAA+GGG | + | chr3_1:62948301-62948320 | None:intergenic | 40.0% | |
| AAGTTGCAGTCGTATCTGTA+AGG | + | chr3_1:62948302-62948321 | None:intergenic | 40.0% | |
| ! | TTAGAATCGAGGGGCATAAT+AGG | + | chr3_1:62948502-62948521 | None:intergenic | 40.0% |
| ! | AGACGGAGTATTAGAATCGA+GGG | + | chr3_1:62948512-62948531 | None:intergenic | 40.0% |
| TGAAGACATTGATAGGGATG+TGG | + | chr3_1:62948536-62948555 | None:intergenic | 40.0% | |
| GGCATCTGAAGACATTGATA+GGG | + | chr3_1:62948542-62948561 | None:intergenic | 40.0% | |
| TGGCATCTGAAGACATTGAT+AGG | + | chr3_1:62948543-62948562 | None:intergenic | 40.0% | |
| ATGTCTTCAGATGCCAATCT+TGG | - | chr3_1:62948547-62948566 | Msa0367290:CDS | 40.0% | |
| TTCATCTCCCATATCAGGAA+AGG | - | chr3_1:62948597-62948616 | Msa0367290:CDS | 40.0% | |
| !! | GAGTTCTGAGGTGATTGTAA+AGG | - | chr3_1:62948627-62948646 | Msa0367290:CDS | 40.0% |
| !! | AAGAGCATCTCTTCTATAGC+TGG | - | chr3_1:62948670-62948689 | Msa0367290:CDS | 40.0% |
| CATCTCTTCTATAGCTGGAA+AGG | - | chr3_1:62948675-62948694 | Msa0367290:CDS | 40.0% | |
| TCTTCTATAGCTGGAAAGGA+CGG | - | chr3_1:62948679-62948698 | Msa0367290:CDS | 40.0% | |
| ! | TTTGGGATCCGATCATGAAC+CGG | + | chr3_1:62941323-62941342 | None:intergenic | 45.0% |
| TCGATTGGATCCAGAATTCG+AGG | - | chr3_1:62941426-62941445 | Msa0367290:three_prime_UTR | 45.0% | |
| ATTGGATCCAGAATTCGAGG+AGG | - | chr3_1:62941429-62941448 | Msa0367290:three_prime_UTR | 45.0% | |
| CCGTCTTCTTCGAGTAATGA+TGG | - | chr3_1:62941556-62941575 | Msa0367290:exon | 45.0% | |
| ! | TCTTCGCTTTCGTCGCTTTA+TGG | - | chr3_1:62941649-62941668 | Msa0367290:CDS | 45.0% |
| AAAACAGAGAGAGACCTTGG+AGG | + | chr3_1:62941728-62941747 | None:intergenic | 45.0% | |
| CCTTTGACACACAGAGAAAC+AGG | + | chr3_1:62942009-62942028 | None:intergenic | 45.0% | |
| ! | CCTGTTTCTCTGTGTGTCAA+AGG | - | chr3_1:62942006-62942025 | Msa0367290:intron | 45.0% |
| TACTCAATTGCAAGGGGGTT+GGG | - | chr3_1:62942029-62942048 | Msa0367290:intron | 45.0% | |
| CTGGGTTCAAACTCGTTTGA+AGG | - | chr3_1:62942094-62942113 | Msa0367290:intron | 45.0% | |
| CAAAATCTTTAGCGCGAAGC+TGG | - | chr3_1:62942173-62942192 | Msa0367290:intron | 45.0% | |
| TAGCGCGAAGCTGGAAAAAA+TGG | - | chr3_1:62942182-62942201 | Msa0367290:intron | 45.0% | |
| ! | CAAGCGAAAAGCACACTCAT+AGG | + | chr3_1:62942209-62942228 | None:intergenic | 45.0% |
| ! | CTATGAGTGTGCTTTTCGCT+TGG | - | chr3_1:62942207-62942226 | Msa0367290:intron | 45.0% |
| GGCAATTGAAGCCAAACCAA+AGG | + | chr3_1:62942290-62942309 | None:intergenic | 45.0% | |
| AGACTACCTAATATGTGGGG+GGG | + | chr3_1:62942322-62942341 | None:intergenic | 45.0% | |
| ACAAACCTTGCAAAGCCAGA+GGG | + | chr3_1:62942512-62942531 | None:intergenic | 45.0% | |
| GCCCTGTGTAGCATATACAA+TGG | - | chr3_1:62942535-62942554 | Msa0367290:intron | 45.0% | |
| GTGACCTCAGCAATAGCTTT+AGG | + | chr3_1:62943171-62943190 | None:intergenic | 45.0% | |
| !! | ATGAGCCCAAGAGTGGATTT+TGG | - | chr3_1:62943389-62943408 | Msa0367290:intron | 45.0% |
| !! | TGAGCCCAAGAGTGGATTTT+GGG | - | chr3_1:62943390-62943409 | Msa0367290:intron | 45.0% |
| GTCCCAGGTATTTCAGATTC+TGG | + | chr3_1:62943466-62943485 | None:intergenic | 45.0% | |
| CTGAAATACCTGGGACAACA+AGG | - | chr3_1:62943470-62943489 | Msa0367290:intron | 45.0% | |
| ! | TATTGTGACCTTGTTGTCCC+AGG | + | chr3_1:62943481-62943500 | None:intergenic | 45.0% |
| TATCCTGGCGTAACATCAAG+GGG | - | chr3_1:62943499-62943518 | Msa0367290:intron | 45.0% | |
| TCTCTCAAGTCCTCAGAGAT+AGG | - | chr3_1:62943543-62943562 | Msa0367290:intron | 45.0% | |
| TAGAGGAGGGCAATCTCAAA+AGG | - | chr3_1:62944678-62944697 | Msa0367290:intron | 45.0% | |
| AGAGGAGGGCAATCTCAAAA+GGG | - | chr3_1:62944679-62944698 | Msa0367290:intron | 45.0% | |
| TCTCCTTTCCCTCTTCCATA+AGG | - | chr3_1:62944920-62944939 | Msa0367290:intron | 45.0% | |
| CCTGCAAACACGAATTGCAT+GGG | + | chr3_1:62944969-62944988 | None:intergenic | 45.0% | |
| TCCTGCAAACACGAATTGCA+TGG | + | chr3_1:62944970-62944989 | None:intergenic | 45.0% | |
| TGCAATTCGTGTTTGCAGGA+AGG | - | chr3_1:62944970-62944989 | Msa0367290:intron | 45.0% | |
| GAACTTTGTAGGACAGAGTC+AGG | - | chr3_1:62945065-62945084 | Msa0367290:intron | 45.0% | |
| AGTTCTTGATCTCCTTGCGT+TGG | + | chr3_1:62945144-62945163 | None:intergenic | 45.0% | |
| CAGACTTCATGTCCGTAAGA+TGG | + | chr3_1:62946014-62946033 | None:intergenic | 45.0% | |
| AAAAAGAGTGAGAGTGAGGC+TGG | + | chr3_1:62946090-62946109 | None:intergenic | 45.0% | |
| TTTCTTAGGGTAGAGAGGGA+AGG | + | chr3_1:62946233-62946252 | None:intergenic | 45.0% | |
| ! | CCTGTTTCTTAGGGTAGAGA+GGG | + | chr3_1:62946237-62946256 | None:intergenic | 45.0% |
| ! | ACCTGTTTCTTAGGGTAGAG+AGG | + | chr3_1:62946238-62946257 | None:intergenic | 45.0% |
| AACCTGCAACGAAATCCAGA+TGG | + | chr3_1:62946320-62946339 | None:intergenic | 45.0% | |
| GATTTCGTTGCAGGTTGCAA+TGG | - | chr3_1:62946324-62946343 | Msa0367290:intron | 45.0% | |
| ! | CCGAAGAAGCAGTTTTGCTT+TGG | + | chr3_1:62946359-62946378 | None:intergenic | 45.0% |
| TACTTCAAGCCCCATATGGT+GGG | - | chr3_1:62946793-62946812 | Msa0367290:CDS | 45.0% | |
| ACACAAGACTCCCACCATAT+GGG | + | chr3_1:62946806-62946825 | None:intergenic | 45.0% | |
| TACACAAGACTCCCACCATA+TGG | + | chr3_1:62946807-62946826 | None:intergenic | 45.0% | |
| ! | ATGGTGGGAGTCTTGTGTAT+TGG | - | chr3_1:62946808-62946827 | Msa0367290:CDS | 45.0% |
| GTATTTAATGCTACCCCTGC+AGG | - | chr3_1:62946835-62946854 | Msa0367290:CDS | 45.0% | |
| ATTTAATGCTACCCCTGCAG+GGG | - | chr3_1:62946837-62946856 | Msa0367290:CDS | 45.0% | |
| TGAGACAACCGAAAAGAAGC+AGG | + | chr3_1:62946911-62946930 | None:intergenic | 45.0% | |
| GTTGGATGGGGCTGTAATAT+AGG | - | chr3_1:62947119-62947138 | Msa0367290:intron | 45.0% | |
| TGGATGGGGCTGTAATATAG+GGG | - | chr3_1:62947121-62947140 | Msa0367290:intron | 45.0% | |
| CTGTAATATAGGGGCCTCTT+TGG | - | chr3_1:62947130-62947149 | Msa0367290:intron | 45.0% | |
| ! | GTTTGAGTTTATCCCACCTC+TGG | - | chr3_1:62948139-62948158 | Msa0367290:intron | 45.0% |
| TCGTGAGAATCGCTTTCTGA+GGG | - | chr3_1:62948375-62948394 | Msa0367290:intron | 45.0% | |
| GTACTTAGACGAGAGCAATG+AGG | - | chr3_1:62948438-62948457 | Msa0367290:intron | 45.0% | |
| ! | GACGGAGTATTAGAATCGAG+GGG | + | chr3_1:62948511-62948530 | None:intergenic | 45.0% |
| ! | CAGACGGAGTATTAGAATCG+AGG | + | chr3_1:62948513-62948532 | None:intergenic | 45.0% |
| ATTGATAGGGATGTGGCAGA+CGG | + | chr3_1:62948529-62948548 | None:intergenic | 45.0% | |
| TTCAGATGCCAATCTTGGCA+TGG | - | chr3_1:62948552-62948571 | Msa0367290:CDS | 45.0% | |
| TCAGATGCCAATCTTGGCAT+GGG | - | chr3_1:62948553-62948572 | Msa0367290:CDS | 45.0% | |
| TTCTGATCCCATGCCAAGAT+TGG | + | chr3_1:62948563-62948582 | None:intergenic | 45.0% | |
| GGCATTTCATCTCCCATATC+AGG | - | chr3_1:62948592-62948611 | Msa0367290:CDS | 45.0% | |
| ACTGACGCTTCAGTGTATCA+TGG | + | chr3_1:62948905-62948924 | None:intergenic | 45.0% | |
| !!! | TATTTTTTAATAGAAATAAA+AGG | - | chr3_1:62943791-62943810 | Msa0367290:CDS | 5.0% |
| TGAAGAACTCTGATGCGACC+GGG | + | chr3_1:62941274-62941293 | None:intergenic | 50.0% | |
| GTGAAGAACTCTGATGCGAC+CGG | + | chr3_1:62941275-62941294 | None:intergenic | 50.0% | |
| TCCAGAATCTTCGTCGGTGA+CGG | + | chr3_1:62941364-62941383 | None:intergenic | 50.0% | |
| ! | GTGCCGATAACCGTTTCGAT+TGG | - | chr3_1:62941411-62941430 | Msa0367290:three_prime_UTR | 50.0% |
| GCTTCGTCTTCGAATAGCGA+AGG | + | chr3_1:62941508-62941527 | None:intergenic | 50.0% | |
| ACTCCAATCTCTCTTCTCCG+CGG | - | chr3_1:62941674-62941693 | Msa0367290:CDS | 50.0% | |
| ! | ATAGGAGTAGGTTGAGACCG+CGG | + | chr3_1:62941694-62941713 | None:intergenic | 50.0% |
| GATGGAGGAGCAATAGGAGT+AGG | + | chr3_1:62941706-62941725 | None:intergenic | 50.0% | |
| TTGGAGGATGGAGGAGCAAT+AGG | + | chr3_1:62941712-62941731 | None:intergenic | 50.0% | |
| TATTGCTCCTCCATCCTCCA+AGG | - | chr3_1:62941711-62941730 | Msa0367290:CDS | 50.0% | |
| GTACTCAATTGCAAGGGGGT+TGG | - | chr3_1:62942028-62942047 | Msa0367290:intron | 50.0% | |
| GGCCAGTCTCTACAAACCTT+TGG | - | chr3_1:62942271-62942290 | Msa0367290:intron | 50.0% | |
| ACTACCTAATATGTGGGGGG+GGG | + | chr3_1:62942320-62942339 | None:intergenic | 50.0% | |
| GACTACCTAATATGTGGGGG+GGG | + | chr3_1:62942321-62942340 | None:intergenic | 50.0% | |
| GGTCAAGTGTGAGTAGGCAA+TGG | - | chr3_1:62942483-62942502 | Msa0367290:intron | 50.0% | |
| CACAAACCTTGCAAAGCCAG+AGG | + | chr3_1:62942513-62942532 | None:intergenic | 50.0% | |
| !! | GAGCCCAAGAGTGGATTTTG+GGG | - | chr3_1:62943391-62943410 | Msa0367290:intron | 50.0% |
| ACGCCCCAAAATCCACTCTT+GGG | + | chr3_1:62943397-62943416 | None:intergenic | 50.0% | |
| AACGCCCCAAAATCCACTCT+TGG | + | chr3_1:62943398-62943417 | None:intergenic | 50.0% | |
| !!! | GATTTTGGGGCGTTCTAGCT+AGG | - | chr3_1:62943404-62943423 | Msa0367290:intron | 50.0% |
| TTTCCCCTTGATGTTACGCC+AGG | + | chr3_1:62943505-62943524 | None:intergenic | 50.0% | |
| TGGCGTAACATCAAGGGGAA+AGG | - | chr3_1:62943504-62943523 | Msa0367290:intron | 50.0% | |
| ! | GCTAGTGTCATTCTCTGTGC+AGG | - | chr3_1:62944637-62944656 | Msa0367290:intron | 50.0% |
| ACTCATATCGGTGGCACCAT+TGG | - | chr3_1:62944749-62944768 | Msa0367290:intron | 50.0% | |
| CCCATGCAATTCGTGTTTGC+AGG | - | chr3_1:62944966-62944985 | Msa0367290:intron | 50.0% | |
| CTCTGTCCTACAAAGTTCCC+AGG | + | chr3_1:62945063-62945082 | None:intergenic | 50.0% | |
| !! | TGAGGTTCTAAAGCCTAGCC+AGG | - | chr3_1:62945970-62945989 | Msa0367290:intron | 50.0% |
| !! | GAGGTTCTAAAGCCTAGCCA+GGG | - | chr3_1:62945971-62945990 | Msa0367290:intron | 50.0% |
| ACCTAGGAAAACTATGGCCC+TGG | + | chr3_1:62945991-62946010 | None:intergenic | 50.0% | |
| CATGTCCGTAAGATGGACCT+AGG | + | chr3_1:62946007-62946026 | None:intergenic | 50.0% | |
| GACCGCTGAAACAAGAGTGA+TGG | - | chr3_1:62946033-62946052 | Msa0367290:intron | 50.0% | |
| CCCTCTCTACCCTAAGAAAC+AGG | - | chr3_1:62946234-62946253 | Msa0367290:intron | 50.0% | |
| TGCCATCTGGATTTCGTTGC+AGG | - | chr3_1:62946315-62946334 | Msa0367290:intron | 50.0% | |
| GTTGCAGGTTGCAATGGCAA+TGG | - | chr3_1:62946330-62946349 | Msa0367290:intron | 50.0% | |
| TCGGGAGTTGAAGACTGTCA+AGG | - | chr3_1:62946375-62946394 | Msa0367290:intron | 50.0% | |
| GAAGACTGTCAAGGCTGATC+TGG | - | chr3_1:62946384-62946403 | Msa0367290:intron | 50.0% | |
| GGCTGATCTGGCATTTGCAA+AGG | - | chr3_1:62946396-62946415 | Msa0367290:intron | 50.0% | |
| GGATCGATGTGCTCAACTAG+AGG | - | chr3_1:62946417-62946436 | Msa0367290:intron | 50.0% | |
| TCCTCCGTGTAAATCGCGAA+AGG | - | chr3_1:62946452-62946471 | Msa0367290:intron | 50.0% | |
| CCTCCGTGTAAATCGCGAAA+GGG | - | chr3_1:62946453-62946472 | Msa0367290:intron | 50.0% | |
| CTCCGTGTAAATCGCGAAAG+GGG | - | chr3_1:62946454-62946473 | Msa0367290:intron | 50.0% | |
| CTCCCCTTTCGCGATTTACA+CGG | + | chr3_1:62946459-62946478 | None:intergenic | 50.0% | |
| CTACTTCAAGCCCCATATGG+TGG | - | chr3_1:62946792-62946811 | Msa0367290:CDS | 50.0% | |
| CACAAGACTCCCACCATATG+GGG | + | chr3_1:62946805-62946824 | None:intergenic | 50.0% | |
| CAAACTCAAAACCCCTGCAG+GGG | + | chr3_1:62946851-62946870 | None:intergenic | 50.0% | |
| CCAAACTCAAAACCCCTGCA+GGG | + | chr3_1:62946852-62946871 | None:intergenic | 50.0% | |
| TACTGTGCAAAGGTGGGCAA+AGG | - | chr3_1:62947627-62947646 | Msa0367290:intron | 50.0% | |
| ACTGTGCAAAGGTGGGCAAA+GGG | - | chr3_1:62947628-62947647 | Msa0367290:intron | 50.0% | |
| GTGTCTTCAAAGGGGAAGCA+GGG | + | chr3_1:62948076-62948095 | None:intergenic | 50.0% | |
| AGTGTCTTCAAAGGGGAAGC+AGG | + | chr3_1:62948077-62948096 | None:intergenic | 50.0% | |
| TCTAGCTGAGAAAGCTCGCT+TGG | - | chr3_1:62948330-62948349 | Msa0367290:intron | 50.0% | |
| CTCGTGAGAATCGCTTTCTG+AGG | - | chr3_1:62948374-62948393 | Msa0367290:intron | 50.0% | |
| ! | TGAGAATCGCTTTCTGAGGG+AGG | - | chr3_1:62948378-62948397 | Msa0367290:intron | 50.0% |
| GGTGAGTGGTGGCTCGATTT+GGG | + | chr3_1:62941340-62941359 | None:intergenic | 55.0% | |
| TGGTGAGTGGTGGCTCGATT+TGG | + | chr3_1:62941341-62941360 | None:intergenic | 55.0% | |
| ! | AGAATCTTCGTCGGTGACGG+TGG | + | chr3_1:62941361-62941380 | None:intergenic | 55.0% |
| ACCGTCACCGACGAAGATTC+TGG | - | chr3_1:62941360-62941379 | Msa0367290:three_prime_UTR | 55.0% | |
| CAAAACCGCGCTGAGCGTTA+CGG | - | chr3_1:62941389-62941408 | Msa0367290:three_prime_UTR | 55.0% | |
| AGACCGCGGAGAAGAGAGAT+TGG | + | chr3_1:62941680-62941699 | None:intergenic | 55.0% | |
| AGAGAGACCTTGGAGGATGG+AGG | + | chr3_1:62941721-62941740 | None:intergenic | 55.0% | |
| CAGAGAGAGACCTTGGAGGA+TGG | + | chr3_1:62941724-62941743 | None:intergenic | 55.0% | |
| GACACACAGAGAAACAGGGG+AGG | + | chr3_1:62942004-62942023 | None:intergenic | 55.0% | |
| TACCTAATATGTGGGGGGGG+GGG | + | chr3_1:62942318-62942337 | None:intergenic | 55.0% | |
| CTACCTAATATGTGGGGGGG+GGG | + | chr3_1:62942319-62942338 | None:intergenic | 55.0% | |
| GGCATATTGTTGCCTGCGCA+AGG | - | chr3_1:62942462-62942481 | Msa0367290:intron | 55.0% | |
| ACTCACACTTGACCTTGCGC+AGG | + | chr3_1:62942477-62942496 | None:intergenic | 55.0% | |
| GCGCAAGGTCAAGTGTGAGT+AGG | - | chr3_1:62942477-62942496 | Msa0367290:intron | 55.0% | |
| AGTAGGCAATGGAAGCCCTC+TGG | - | chr3_1:62942494-62942513 | Msa0367290:intron | 55.0% | |
| CGTTGCAAGAACCCCAGTTG+CGG | - | chr3_1:62945106-62945125 | Msa0367290:CDS | 55.0% | |
| ! | TCCTTGCGTTGGCGACATCT+GGG | + | chr3_1:62945133-62945152 | None:intergenic | 55.0% |
| !! | TGAAGGCATCTCGCGACGTA+AGG | - | chr3_1:62945169-62945188 | Msa0367290:CDS | 55.0% |
| GGAAAACTATGGCCCTGGCT+AGG | + | chr3_1:62945986-62946005 | None:intergenic | 55.0% | |
| ! | GCCAGGGCCATAGTTTTCCT+AGG | - | chr3_1:62945987-62946006 | Msa0367290:intron | 55.0% |
| CCCTTTCGCGATTTACACGG+AGG | + | chr3_1:62946456-62946475 | None:intergenic | 55.0% | |
| !!! | CCCTGCAGGGGTTTTGAGTT+TGG | - | chr3_1:62946849-62946868 | Msa0367290:CDS | 55.0% |
| GCCAAACTCAAAACCCCTGC+AGG | + | chr3_1:62946853-62946872 | None:intergenic | 55.0% | |
| CTGTGCAAAGGTGGGCAAAG+GGG | - | chr3_1:62947629-62947648 | Msa0367290:intron | 55.0% | |
| ! | GGCACTGGGGGTAAGTTAAG+AGG | + | chr3_1:62948481-62948500 | None:intergenic | 55.0% |
| !! | AGGGGCATAATAGGCACTGG+GGG | + | chr3_1:62948493-62948512 | None:intergenic | 55.0% |
| ! | GAGGGGCATAATAGGCACTG+GGG | + | chr3_1:62948494-62948513 | None:intergenic | 55.0% |
| ! | CGAGGGGCATAATAGGCACT+GGG | + | chr3_1:62948495-62948514 | None:intergenic | 55.0% |
| ! | TCGAGGGGCATAATAGGCAC+TGG | + | chr3_1:62948496-62948515 | None:intergenic | 55.0% |
| ACCTAATATGTGGGGGGGGG+GGG | + | chr3_1:62942317-62942336 | None:intergenic | 60.0% | |
| !! | GGAAGCCCTCTGGCTTTGCA+AGG | - | chr3_1:62942504-62942523 | Msa0367290:intron | 60.0% |
| ! | GACATCTGGGACCGCAACTG+GGG | + | chr3_1:62945120-62945139 | None:intergenic | 60.0% |
| ! | CGACATCTGGGACCGCAACT+GGG | + | chr3_1:62945121-62945140 | None:intergenic | 60.0% |
| TCCCAGATGTCGCCAACGCA+AGG | - | chr3_1:62945129-62945148 | Msa0367290:CDS | 60.0% | |
| ! | CTCCTTGCGTTGGCGACATC+TGG | + | chr3_1:62945134-62945153 | None:intergenic | 60.0% |
| AGGCATCTCGCGACGTAAGG+TGG | - | chr3_1:62945172-62945191 | Msa0367290:CDS | 60.0% | |
| AAGGTGGGCAAAGGGGAGCA+TGG | - | chr3_1:62947636-62947655 | Msa0367290:intron | 60.0% | |
| CAAAGGGGAAGCAGGGAGAG+TGG | + | chr3_1:62948069-62948088 | None:intergenic | 60.0% | |
| ! | TCGGTGACGGTGGTGAGTGG+TGG | + | chr3_1:62941351-62941370 | None:intergenic | 65.0% |
| ! | TCGTCGGTGACGGTGGTGAG+TGG | + | chr3_1:62941354-62941373 | None:intergenic | 65.0% |
| TAATATGTGGGGGGGGGGGG+GGG | + | chr3_1:62942314-62942333 | None:intergenic | 65.0% | |
| CTAATATGTGGGGGGGGGGG+GGG | + | chr3_1:62942315-62942334 | None:intergenic | 65.0% | |
| CCTAATATGTGGGGGGGGGG+GGG | + | chr3_1:62942316-62942335 | None:intergenic | 65.0% | |
| ! | GCGACATCTGGGACCGCAAC+TGG | + | chr3_1:62945122-62945141 | None:intergenic | 65.0% |
| CGGCACCGTAACGCTCAGCG+CGG | + | chr3_1:62941397-62941416 | None:intergenic | 70.0% | |
| CCCCCCCCCCCCCACATATT+AGG | - | chr3_1:62942313-62942332 | Msa0367290:intron | 70.0% | |
| ! | TATGTGGGGGGGGGGGGGGG+AGG | + | chr3_1:62942311-62942330 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 62941261 | 62949016 | 62941261 | ID=Msa0367290;Name=Msa0367290 |
| chr3_1 | mRNA | 62941261 | 62949016 | 62941261 | ID=Msa0367290-mRNA-1;Parent=Msa0367290;Name=Msa0367290-mRNA-1;_AED=0.20;_eAED=0.20;_QI=202|1|1|1|1|1|6|308|445 |
| chr3_1 | exon | 62941261 | 62941970 | 62941261 | ID=Msa0367290-mRNA-1:exon:12318;Parent=Msa0367290-mRNA-1 |
| chr3_1 | exon | 62943776 | 62943940 | 62943776 | ID=Msa0367290-mRNA-1:exon:12317;Parent=Msa0367290-mRNA-1 |
| chr3_1 | exon | 62945092 | 62945289 | 62945092 | ID=Msa0367290-mRNA-1:exon:12316;Parent=Msa0367290-mRNA-1 |
| chr3_1 | exon | 62945493 | 62945618 | 62945493 | ID=Msa0367290-mRNA-1:exon:12315;Parent=Msa0367290-mRNA-1 |
| chr3_1 | exon | 62946752 | 62946928 | 62946752 | ID=Msa0367290-mRNA-1:exon:12314;Parent=Msa0367290-mRNA-1 |
| chr3_1 | exon | 62948545 | 62949016 | 62948545 | ID=Msa0367290-mRNA-1:exon:12313;Parent=Msa0367290-mRNA-1 |
| chr3_1 | five_prime_UTR | 62948815 | 62949016 | 62948815 | ID=Msa0367290-mRNA-1:five_prime_utr;Parent=Msa0367290-mRNA-1 |
| chr3_1 | CDS | 62948545 | 62948814 | 62948545 | ID=Msa0367290-mRNA-1:cds;Parent=Msa0367290-mRNA-1 |
| chr3_1 | CDS | 62946752 | 62946928 | 62946752 | ID=Msa0367290-mRNA-1:cds;Parent=Msa0367290-mRNA-1 |
| chr3_1 | CDS | 62945493 | 62945618 | 62945493 | ID=Msa0367290-mRNA-1:cds;Parent=Msa0367290-mRNA-1 |
| chr3_1 | CDS | 62945092 | 62945289 | 62945092 | ID=Msa0367290-mRNA-1:cds;Parent=Msa0367290-mRNA-1 |
| chr3_1 | CDS | 62943776 | 62943940 | 62943776 | ID=Msa0367290-mRNA-1:cds;Parent=Msa0367290-mRNA-1 |
| chr3_1 | CDS | 62941569 | 62941970 | 62941569 | ID=Msa0367290-mRNA-1:cds;Parent=Msa0367290-mRNA-1 |
| chr3_1 | three_prime_UTR | 62941261 | 62941568 | 62941261 | ID=Msa0367290-mRNA-1:three_prime_utr;Parent=Msa0367290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
