Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275160 | sp|Q8VYU3|GCH1_SOLLC | 59.871 | 466 | 162 | 8 | 1 | 454 | 1 | 453 | 0.0 | 543 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275160 | A0A072TNB0 | 95.759 | 448 | 18 | 1 | 1 | 447 | 1 | 448 | 0.0 | 866 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044160 | Msa1275160 | 0.811813 | 5.803017e-51 | -8.615850e-47 |
| Msa0657710 | Msa1275160 | 0.823255 | 1.528680e-53 | -8.615850e-47 |
| Msa0657720 | Msa1275160 | 0.802740 | 4.860566e-49 | -8.615850e-47 |
| Msa0687580 | Msa1275160 | 0.812834 | 3.472293e-51 | -8.615850e-47 |
| Msa0691490 | Msa1275160 | 0.818570 | 1.829216e-52 | -8.615850e-47 |
| Msa0702790 | Msa1275160 | 0.815514 | 8.891210e-52 | -8.615850e-47 |
| Msa0702800 | Msa1275160 | 0.827616 | 1.418267e-54 | -8.615850e-47 |
| Msa0722890 | Msa1275160 | 0.806628 | 7.499068e-50 | -8.615850e-47 |
| Msa0723090 | Msa1275160 | 0.813901 | 2.024116e-51 | -8.615850e-47 |
| Msa0813160 | Msa1275160 | 0.816979 | 4.183256e-52 | -8.615850e-47 |
| Msa0828950 | Msa1275160 | 0.811729 | 6.051837e-51 | -8.615850e-47 |
| Msa0828960 | Msa1275160 | 0.828215 | 1.017753e-54 | -8.615850e-47 |
| Msa0139120 | Msa1275160 | 0.815458 | 9.151861e-52 | -8.615850e-47 |
| Msa0139500 | Msa1275160 | 0.812361 | 4.406271e-51 | -8.615850e-47 |
| Msa0183710 | Msa1275160 | 0.808098 | 3.660118e-50 | -8.615850e-47 |
| Msa0203080 | Msa1275160 | 0.812709 | 3.698549e-51 | -8.615850e-47 |
| Msa1232680 | Msa1275160 | 0.902155 | 1.294451e-78 | -8.615850e-47 |
| Msa1275160 | Msa1313250 | 0.844915 | 5.622579e-59 | -8.615850e-47 |
| Msa1275160 | Msa1314190 | 0.817403 | 3.357595e-52 | -8.615850e-47 |
| Msa1275160 | Msa1365820 | 0.808399 | 3.156214e-50 | -8.615850e-47 |
| Msa1275160 | Msa1368390 | 0.807276 | 5.471509e-50 | -8.615850e-47 |
| Msa1275160 | Msa1447100 | 0.811139 | 8.129272e-51 | -8.615850e-47 |
| Msa1275160 | Msa1449900 | 0.810644 | 1.040577e-50 | -8.615850e-47 |
| Msa0387930 | Msa1275160 | 0.810566 | 1.081749e-50 | -8.615850e-47 |
| Msa0437520 | Msa1275160 | 0.803499 | 3.386526e-49 | -8.615850e-47 |
| Msa0440350 | Msa1275160 | 0.812497 | 4.116037e-51 | -8.615850e-47 |
| Msa1013190 | Msa1275160 | 0.805186 | 1.507755e-49 | -8.615850e-47 |
| Msa1029820 | Msa1275160 | 0.811314 | 7.447689e-51 | -8.615850e-47 |
| Msa1044250 | Msa1275160 | 0.818501 | 1.896764e-52 | -8.615850e-47 |
| Msa1045230 | Msa1275160 | 0.800273 | 1.557052e-48 | -8.615850e-47 |
| Msa1068940 | Msa1275160 | 0.827624 | 1.411821e-54 | -8.615850e-47 |
| Msa1088320 | Msa1275160 | 0.806220 | 9.142321e-50 | -8.615850e-47 |
| Msa1106590 | Msa1275160 | 0.839982 | 1.143603e-57 | -8.615850e-47 |
| Msa0284800 | Msa1275160 | 0.803332 | 3.666532e-49 | -8.615850e-47 |
| Msa0304570 | Msa1275160 | 0.801784 | 7.647286e-49 | -8.615850e-47 |
| Msa0326710 | Msa1275160 | 0.833023 | 6.767843e-56 | -8.615850e-47 |
| Msa0330520 | Msa1275160 | 0.824074 | 9.827269e-54 | -8.615850e-47 |
| Msa0354840 | Msa1275160 | 0.818373 | 2.027761e-52 | -8.615850e-47 |
| Msa1149910 | Msa1275160 | 0.808297 | 3.318601e-50 | -8.615850e-47 |
| Msa1156710 | Msa1275160 | 0.830332 | 3.117069e-55 | -8.615850e-47 |
| Msa1158200 | Msa1275160 | 0.803089 | 4.117239e-49 | -8.615850e-47 |
| Msa1179660 | Msa1275160 | 0.938080 | 1.213892e-98 | -8.615850e-47 |
| Msa0511780 | Msa1275160 | 0.804915 | 1.717346e-49 | -8.615850e-47 |
| Msa0554880 | Msa1275160 | 0.807420 | 5.099034e-50 | -8.615850e-47 |
| Msa0574900 | Msa1275160 | 0.808584 | 2.882769e-50 | -8.615850e-47 |
| Msa0597700 | Msa1275160 | 0.801726 | 7.861059e-49 | -8.615850e-47 |
| Msa0843240 | Msa1275160 | 0.806069 | 9.836994e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275160 | MtrunA17_Chr8g0341821 | 95.759 | 448 | 18 | 1 | 1 | 447 | 1 | 448 | 0.0 | 866 |
| Msa1275160 | MtrunA17_Chr8g0339291 | 70.236 | 467 | 127 | 5 | 1 | 457 | 1 | 465 | 0.0 | 644 |
| Msa1275160 | MtrunA17_Chr7g0235071 | 68.251 | 463 | 128 | 6 | 1 | 454 | 1 | 453 | 0.0 | 630 |
| Msa1275160 | MtrunA17_Chr7g0238471 | 71.605 | 81 | 22 | 1 | 72 | 152 | 34 | 113 | 8.20e-37 | 131 |
| Msa1275160 | MtrunA17_Chr7g0238481 | 56.180 | 89 | 34 | 2 | 193 | 281 | 14 | 97 | 7.67e-23 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1275160 | AT3G07270.1 | 58.030 | 467 | 181 | 8 | 1 | 458 | 1 | 461 | 0.0 | 525 |
| Msa1275160 | AT3G07270.2 | 59.775 | 445 | 166 | 7 | 21 | 458 | 23 | 461 | 0.0 | 524 |
Find 103 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAACATTGCACAAATTT+AGG | 0.086006 | 8_3:-8990647 | None:intergenic |
| AGTACTGATTGCTTTAATTT+TGG | 0.144486 | 8_3:-8989936 | None:intergenic |
| AATGACAAAGTTTGTCTTAA+AGG | 0.159046 | 8_3:+8989866 | Msa1275160:CDS |
| TATATGAACAACACCATAAA+AGG | 0.177080 | 8_3:-8990206 | None:intergenic |
| TTTATTTATAGATTTATTTA+TGG | 0.199973 | 8_3:-8990563 | None:intergenic |
| TCTTCAATTGTTAAATCTTT+AGG | 0.230854 | 8_3:+8989980 | Msa1275160:CDS |
| GGCCTAAATAATAATAAAAT+TGG | 0.265269 | 8_3:+8989428 | Msa1275160:CDS |
| CAAAGATCTGTTACTAGGTT+TGG | 0.272301 | 8_3:+8987594 | Msa1275160:CDS |
| TGCAACATTGCACAAATTTA+GGG | 0.284047 | 8_3:-8990646 | None:intergenic |
| ATGAACTATTGATTGTAAAA+TGG | 0.296775 | 8_3:-8990269 | None:intergenic |
| AAAGATCTGTTACTAGGTTT+GGG | 0.298638 | 8_3:+8987595 | Msa1275160:CDS |
| GTTAAGTTACTTGTTTCTTC+AGG | 0.301438 | 8_3:+8989767 | Msa1275160:CDS |
| TTTAGTCTTCTTAAGTTTAG+AGG | 0.309476 | 8_3:+8989836 | Msa1275160:CDS |
| AGCAATCAGTACTTCTATTA+TGG | 0.318044 | 8_3:+8989946 | Msa1275160:CDS |
| TTATTATTTAGGCCATCTTC+AGG | 0.323009 | 8_3:-8989419 | None:intergenic |
| TCTACAAGCTCTTTCCTTGT+TGG | 0.323847 | 8_3:-8990010 | None:intergenic |
| ACCGCAACCATTGCCGTATT+AGG | 0.326394 | 8_3:+8990442 | Msa1275160:CDS |
| TGCTTAAGCCTACCACTCTT+TGG | 0.341064 | 8_3:-8989568 | None:intergenic |
| CATGTTGGTTATATCCCTTC+AGG | 0.349179 | 8_3:+8989545 | Msa1275160:CDS |
| TTATTTATAGATTTATTTAT+GGG | 0.351261 | 8_3:-8990562 | None:intergenic |
| GATATCGACTCAAACGATAT+AGG | 0.353026 | 8_3:+8989740 | Msa1275160:CDS |
| TTACTTGTTTCTTCAGGATC+TGG | 0.355301 | 8_3:+8989773 | Msa1275160:CDS |
| TGTAAAATGGACTTTCCAAT+TGG | 0.369408 | 8_3:-8990256 | None:intergenic |
| ACATGACACTTGACTTGAAA+TGG | 0.378614 | 8_3:-8989527 | None:intergenic |
| AGTATGATAGCAACTCCTTC+TGG | 0.380673 | 8_3:-8989686 | None:intergenic |
| TGCTCACATTGTGACCAAAA+AGG | 0.383650 | 8_3:-8990172 | None:intergenic |
| ATAGGATACTTTCTTTCTAA+AGG | 0.384378 | 8_3:+8990226 | Msa1275160:CDS |
| TCGATATCTTTGTATGGAAA+AGG | 0.388798 | 8_3:-8989725 | None:intergenic |
| TCCACCTACCAATGGTGAAA+TGG | 0.397277 | 8_3:-8990347 | None:intergenic |
| TCAAACTTCAAGTTCAAGAA+AGG | 0.419538 | 8_3:+8990302 | Msa1275160:CDS |
| CCAAGTGCTACATCTCTTGA+AGG | 0.424595 | 8_3:+8990514 | Msa1275160:CDS |
| ATATCGACTCAAACGATATA+GGG | 0.424779 | 8_3:+8989741 | Msa1275160:CDS |
| TTTGAGTCGATATCTTTGTA+TGG | 0.426394 | 8_3:-8989731 | None:intergenic |
| AAAACTTTGGTGTATTTGAT+TGG | 0.432637 | 8_3:+8990780 | Msa1275160:three_prime_UTR |
| AATAAAATTGGTCATGGTGG+TGG | 0.440425 | 8_3:+8989440 | Msa1275160:CDS |
| TCTAAAGGATGCAATCCAAT+TGG | 0.442539 | 8_3:+8990241 | Msa1275160:CDS |
| TTTCAGTTAATGGGGTCGTT+TGG | 0.445001 | 8_3:+8987475 | Msa1275160:exon |
| AAGGCCTTTGCAACACGAAA+TGG | 0.450325 | 8_3:-8987652 | None:intergenic |
| TCCTAATACGGCAATGGTTG+CGG | 0.451246 | 8_3:-8990443 | None:intergenic |
| GGCTGAAGATTTGAAAACTT+TGG | 0.458466 | 8_3:+8990767 | Msa1275160:three_prime_UTR |
| ACCTCTGGTTCCTTCAGAAA+AGG | 0.470637 | 8_3:-8987671 | None:intergenic |
| AGTTGAAAAGTGTCCTAATA+CGG | 0.473329 | 8_3:-8990455 | None:intergenic |
| ATCTTTGACTGCACACTCAA+TGG | 0.481435 | 8_3:-8987578 | None:intergenic |
| GTCACACTTGCATGATCTCT+AGG | 0.491926 | 8_3:+8990395 | Msa1275160:CDS |
| ATTGGTCATGGTGGTGGAGT+AGG | 0.493372 | 8_3:+8989446 | Msa1275160:CDS |
| TGTGTTCAGCTTTGCATCAA+GGG | 0.508751 | 8_3:+8989657 | Msa1275160:CDS |
| CGATATCTTTGTATGGAAAA+GGG | 0.509754 | 8_3:-8989724 | None:intergenic |
| TTACCATGTGATAATGGTCA+TGG | 0.510242 | 8_3:+8990830 | Msa1275160:three_prime_UTR |
| TGCAGAAACCATTTCACCAT+TGG | 0.513288 | 8_3:+8990339 | Msa1275160:CDS |
| ATGTGTTCAGCTTTGCATCA+AGG | 0.516850 | 8_3:+8989656 | Msa1275160:CDS |
| CTAATACCAATGGAGAGGTA+AGG | 0.520921 | 8_3:+8990113 | Msa1275160:CDS |
| CTACCACTCTTTGGCCTGAA+GGG | 0.523240 | 8_3:-8989559 | None:intergenic |
| CCTACCACTCTTTGGCCTGA+AGG | 0.523497 | 8_3:-8989560 | None:intergenic |
| ATTCTACCACATGTCATATG+AGG | 0.525458 | 8_3:-8990608 | None:intergenic |
| CCTTCAAGAGATGTAGCACT+TGG | 0.525506 | 8_3:-8990514 | None:intergenic |
| AGTTGAATATTATCTTGAGT+TGG | 0.530652 | 8_3:+8987450 | Msa1275160:five_prime_UTR |
| TCACACTTGCATGATCTCTA+GGG | 0.535306 | 8_3:+8990396 | Msa1275160:CDS |
| AACATTGATATAGAGATGAA+TGG | 0.535613 | 8_3:+8990082 | Msa1275160:CDS |
| TATTATTTAGGCCATCTTCA+GGG | 0.537173 | 8_3:-8989418 | None:intergenic |
| ATCAAACCTTACCTCTCCAT+TGG | 0.540240 | 8_3:-8990119 | None:intergenic |
| GACACCATTTCGTGTTGCAA+AGG | 0.541589 | 8_3:+8987648 | Msa1275160:CDS |
| AATAATAATAAAATTGGTCA+TGG | 0.542699 | 8_3:+8989434 | Msa1275160:CDS |
| ATATGAACAACACCATAAAA+GGG | 0.543872 | 8_3:-8990205 | None:intergenic |
| TATTGAACTTAATAGAAAAG+AGG | 0.544660 | 8_3:-8990805 | None:intergenic |
| AATAATAAAATTGGTCATGG+TGG | 0.544701 | 8_3:+8989437 | Msa1275160:CDS |
| GGTTACATTTCTAATACCAA+TGG | 0.551456 | 8_3:+8990103 | Msa1275160:CDS |
| GCAGTCAAAGATCTGTTACT+AGG | 0.561012 | 8_3:+8987589 | Msa1275160:CDS |
| GGTGCATTATTCCCTGAAGA+TGG | 0.565188 | 8_3:+8989407 | Msa1275160:CDS |
| CTTAAGCAAGCTTCCTCGTG+TGG | 0.570483 | 8_3:+8989583 | Msa1275160:CDS |
| CCTTCAGGCCAAAGAGTGGT+AGG | 0.576895 | 8_3:+8989560 | Msa1275160:CDS |
| GAATATAAACTGTGTTGTGT+AGG | 0.577375 | 8_3:+8987408 | None:intergenic |
| TTTCAAGTCAAGTGTCATGT+TGG | 0.580286 | 8_3:+8989530 | Msa1275160:CDS |
| AGAGGTAAGGTTTGATGACA+AGG | 0.581040 | 8_3:+8990126 | Msa1275160:CDS |
| GGGGAAGATATTAATAGGGA+AGG | 0.581098 | 8_3:+8987616 | Msa1275160:CDS |
| AAGATCTGTTACTAGGTTTG+GGG | 0.583510 | 8_3:+8987596 | Msa1275160:CDS |
| ACCATTTCACCATTGGTAGG+TGG | 0.594194 | 8_3:+8990346 | Msa1275160:CDS |
| GGTCATGGTGGTGGAGTAGG+TGG | 0.598165 | 8_3:+8989449 | Msa1275160:CDS |
| GAAACCATTTCACCATTGGT+AGG | 0.598373 | 8_3:+8990343 | Msa1275160:CDS |
| AAGGACCACTAGATCAATGT+TGG | 0.603976 | 8_3:+8989885 | Msa1275160:CDS |
| AATGTGAAGGACATTGTTGA+AGG | 0.604917 | 8_3:+8989386 | Msa1275160:CDS |
| GGACACCAACATTGATCTAG+TGG | 0.609250 | 8_3:-8989890 | None:intergenic |
| GAAACTTCAGCATATAGAGA+AGG | 0.616046 | 8_3:-8989911 | None:intergenic |
| AAGACTCACAATAAGAGTAG+AGG | 0.617418 | 8_3:-8989496 | None:intergenic |
| TCGACTCAAACGATATAGGG+TGG | 0.618583 | 8_3:+8989744 | Msa1275160:CDS |
| CGACTCAAACGATATAGGGT+GGG | 0.620043 | 8_3:+8989745 | Msa1275160:CDS |
| TTTCAACTAATCTTGCTGCA+AGG | 0.621567 | 8_3:+8990470 | Msa1275160:CDS |
| AAAGTGTCCTAATACGGCAA+TGG | 0.624670 | 8_3:-8990449 | None:intergenic |
| CAAGTGCTACATCTCTTGAA+GGG | 0.625994 | 8_3:+8990515 | Msa1275160:CDS |
| AAGCAAGCTTCCTCGTGTGG+CGG | 0.628840 | 8_3:+8989586 | Msa1275160:CDS |
| AGATCTGTTACTAGGTTTGG+GGG | 0.630337 | 8_3:+8987597 | Msa1275160:CDS |
| CTTTAGGAGAAGATCCAACA+AGG | 0.631850 | 8_3:+8989996 | Msa1275160:CDS |
| AAATGTGATTGTAGTTGTTG+AGG | 0.632370 | 8_3:+8990369 | Msa1275160:CDS |
| AGGTTATAGGCAAAATGTGA+AGG | 0.638395 | 8_3:+8989373 | Msa1275160:intron |
| ATCACATTTCCACCTACCAA+TGG | 0.639419 | 8_3:-8990355 | None:intergenic |
| GCAAATGCTTCCGCCACACG+AGG | 0.643408 | 8_3:-8989596 | None:intergenic |
| AGTCTTCCTCATATGACATG+TGG | 0.644158 | 8_3:+8990602 | Msa1275160:three_prime_UTR |
| CATTTCTAATACCAATGGAG+AGG | 0.648093 | 8_3:+8990108 | Msa1275160:CDS |
| CACACTTGCATGATCTCTAG+GGG | 0.661941 | 8_3:+8990397 | Msa1275160:CDS |
| TATCCCTTCAGGCCAAAGAG+TGG | 0.666606 | 8_3:+8989556 | Msa1275160:CDS |
| CATCAAGGGATACAACCAGA+AGG | 0.683587 | 8_3:+8989671 | Msa1275160:CDS |
| ATCTCATCTGCTAAACGCTG+AGG | 0.692989 | 8_3:-8989635 | None:intergenic |
| AATCCATGACCATTATCACA+TGG | 0.703757 | 8_3:-8990833 | None:intergenic |
| TCAAATGCATTCAAACTGTG+AGG | 0.746780 | 8_3:+8987498 | Msa1275160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAATCAATTTCTTTAT+GGG | - | chr8_3:8988135-8988154 | None:intergenic | 10.0% |
| !! | AAAATTAATCAATTTCTTTA+TGG | - | chr8_3:8988136-8988155 | None:intergenic | 10.0% |
| !! | TTACTCAAAATAATTAAAAA+TGG | - | chr8_3:8990703-8990722 | None:intergenic | 10.0% |
| !!! | TTTGATTATTTGTTTTATTT+TGG | + | chr8_3:8990745-8990764 | Msa1275160:three_prime_UTR | 10.0% |
| !!! | TTGATTATTTGTTTTATTTT+GGG | + | chr8_3:8990746-8990765 | Msa1275160:three_prime_UTR | 10.0% |
| !! | TGATATAACAAACAAAATTT+AGG | + | chr8_3:8988087-8988106 | Msa1275160:intron | 15.0% |
| !!! | AACAAAATTTAGGATATTAT+TGG | + | chr8_3:8988097-8988116 | Msa1275160:intron | 15.0% |
| !! | AATTAATCAATTTCTTTATG+GGG | - | chr8_3:8988134-8988153 | None:intergenic | 15.0% |
| !! | TTAAAAAAAATCTTTCTTGA+AGG | + | chr8_3:8988489-8988508 | Msa1275160:intron | 15.0% |
| !!! | TAAATGTTATTTAACCAAAT+AGG | - | chr8_3:8988651-8988670 | None:intergenic | 15.0% |
| !! | ATTTGGTTAAATAACATTTA+AGG | + | chr8_3:8988651-8988670 | Msa1275160:intron | 15.0% |
| !! | TAATTTCTTCAAAACATTTA+AGG | + | chr8_3:8988677-8988696 | Msa1275160:intron | 15.0% |
| !!! | GTACAAACATTTTTTTAAAA+AGG | + | chr8_3:8988926-8988945 | Msa1275160:intron | 15.0% |
| !! | TTTAATTAGATTTGTACTTA+AGG | + | chr8_3:8989331-8989350 | Msa1275160:intron | 15.0% |
| !!! | GACCAATTTTATTATTATTT+AGG | - | chr8_3:8989433-8989452 | None:intergenic | 15.0% |
| !! | AATAATAATAAAATTGGTCA+TGG | + | chr8_3:8989434-8989453 | Msa1275160:CDS | 15.0% |
| !!! | TCAAAAAAAAAAGTACACTA+AGG | - | chr8_3:8987875-8987894 | None:intergenic | 20.0% |
| !! | AACATCACATTATATATGTA+AGG | + | chr8_3:8988232-8988251 | Msa1275160:intron | 20.0% |
| !! | ACATCACATTATATATGTAA+GGG | + | chr8_3:8988233-8988252 | Msa1275160:intron | 20.0% |
| !!! | ATGTTTTTCTAACTATTACT+TGG | - | chr8_3:8988324-8988343 | None:intergenic | 20.0% |
| !! | TAATAGTTAGAAAAACATTG+TGG | + | chr8_3:8988326-8988345 | Msa1275160:intron | 20.0% |
| !!! | GTGATTTTTCTAAAAAATGA+CGG | - | chr8_3:8988452-8988471 | None:intergenic | 20.0% |
| !! | TATGGACAAAAAAATATTGT+AGG | + | chr8_3:8989066-8989085 | Msa1275160:intron | 20.0% |
| !! | ATGGACAAAAAAATATTGTA+GGG | + | chr8_3:8989067-8989086 | Msa1275160:intron | 20.0% |
| !!! | TTGTAACACATTTTAAGATA+TGG | + | chr8_3:8989094-8989113 | Msa1275160:intron | 20.0% |
| !!! | TATTTTTTAGAAATATGAGG+TGG | - | chr8_3:8989217-8989236 | None:intergenic | 20.0% |
| !!! | TGGTATTTTTTAGAAATATG+AGG | - | chr8_3:8989220-8989239 | None:intergenic | 20.0% |
| !!! | AAATAGCATTTTTGTTCAAA+AGG | + | chr8_3:8989276-8989295 | Msa1275160:intron | 20.0% |
| !! | AAAAAAACATAGTTTCTTTG+TGG | - | chr8_3:8989313-8989332 | None:intergenic | 20.0% |
| !! | GGCCTAAATAATAATAAAAT+TGG | + | chr8_3:8989428-8989447 | Msa1275160:CDS | 20.0% |
| !! | TCTTCAATTGTTAAATCTTT+AGG | + | chr8_3:8989980-8989999 | Msa1275160:CDS | 20.0% |
| !!! | ATGAACTATTGATTGTAAAA+TGG | - | chr8_3:8990272-8990291 | None:intergenic | 20.0% |
| !!! | CAATCAATAGTTCATTTTTA+TGG | + | chr8_3:8990277-8990296 | Msa1275160:CDS | 20.0% |
| !! | TATTGAACTTAATAGAAAAG+AGG | - | chr8_3:8990808-8990827 | None:intergenic | 20.0% |
| !!! | AATATTTTACCATGTGATAA+TGG | + | chr8_3:8990824-8990843 | Msa1275160:three_prime_UTR | 20.0% |
| ! | AGTTGAATATTATCTTGAGT+TGG | + | chr8_3:8987450-8987469 | Msa1275160:five_prime_UTR | 25.0% |
| ! | GCATTCTTCATAAATAAAAG+TGG | - | chr8_3:8987712-8987731 | None:intergenic | 25.0% |
| ! | TGTCCTAATGATATTGTTTA+CGG | + | chr8_3:8987739-8987758 | Msa1275160:intron | 25.0% |
| !!! | GTTACTATGTAATTTTAGTG+AGG | + | chr8_3:8987944-8987963 | Msa1275160:intron | 25.0% |
| ! | TGAGGTTTGAATAATAAGAA+GGG | + | chr8_3:8987962-8987981 | Msa1275160:intron | 25.0% |
| !! | AGTTCATACAAACTATTTTC+TGG | + | chr8_3:8988383-8988402 | Msa1275160:intron | 25.0% |
| !!! | ATACAAACTATTTTCTGGTT+GGG | + | chr8_3:8988388-8988407 | Msa1275160:intron | 25.0% |
| !!! | TTTGGAAACTTTTTCCTATT+TGG | + | chr8_3:8988634-8988653 | Msa1275160:intron | 25.0% |
| ! | CATAATATGCATAACAACAT+GGG | + | chr8_3:8988760-8988779 | Msa1275160:intron | 25.0% |
| ! | AGATACGATAAAGTCAATAA+AGG | + | chr8_3:8988847-8988866 | Msa1275160:intron | 25.0% |
| ! | TTTAAAAAGGTCCTATACAA+AGG | + | chr8_3:8988939-8988958 | Msa1275160:intron | 25.0% |
| ! | TGTACCTGAATCATATATTA+TGG | + | chr8_3:8989048-8989067 | Msa1275160:intron | 25.0% |
| ! | TTGTCCATAATATATGATTC+AGG | - | chr8_3:8989055-8989074 | None:intergenic | 25.0% |
| ! | TAAAACTCGACAATTATCTT+AGG | + | chr8_3:8989157-8989176 | Msa1275160:intron | 25.0% |
| !! | ATTTCTAAAAAATACCACAG+CGG | + | chr8_3:8989223-8989242 | Msa1275160:intron | 25.0% |
| ! | AATAATAAAATTGGTCATGG+TGG | + | chr8_3:8989437-8989456 | Msa1275160:CDS | 25.0% |
| ! | AGAACAAAAATGCTGAAATA+TGG | + | chr8_3:8989804-8989823 | Msa1275160:CDS | 25.0% |
| !! | TTTAGTCTTCTTAAGTTTAG+AGG | + | chr8_3:8989836-8989855 | Msa1275160:CDS | 25.0% |
| ! | AATGACAAAGTTTGTCTTAA+AGG | + | chr8_3:8989866-8989885 | Msa1275160:CDS | 25.0% |
| !!! | AGTACTGATTGCTTTAATTT+TGG | - | chr8_3:8989939-8989958 | None:intergenic | 25.0% |
| ! | AACCATTTCAAAAATCTAGT+AGG | - | chr8_3:8990040-8990059 | None:intergenic | 25.0% |
| ! | AACATTGATATAGAGATGAA+TGG | + | chr8_3:8990082-8990101 | Msa1275160:CDS | 25.0% |
| ! | ATATGAACAACACCATAAAA+GGG | - | chr8_3:8990208-8990227 | None:intergenic | 25.0% |
| ! | TATATGAACAACACCATAAA+AGG | - | chr8_3:8990209-8990228 | None:intergenic | 25.0% |
| !!! | TTTTATGGTGTTGTTCATAT+AGG | + | chr8_3:8990208-8990227 | Msa1275160:CDS | 25.0% |
| ! | ATAGGATACTTTCTTTCTAA+AGG | + | chr8_3:8990226-8990245 | Msa1275160:CDS | 25.0% |
| !!! | AATGTTGCAAAAGTTTTTAG+TGG | + | chr8_3:8990660-8990679 | Msa1275160:three_prime_UTR | 25.0% |
| !! | AAAACTTTGGTGTATTTGAT+TGG | + | chr8_3:8990780-8990799 | Msa1275160:three_prime_UTR | 25.0% |
| !!! | TGAGTTGGTTTTTCAGTTAA+TGG | + | chr8_3:8987465-8987484 | Msa1275160:exon | 30.0% |
| !!! | GAGTTGGTTTTTCAGTTAAT+GGG | + | chr8_3:8987466-8987485 | Msa1275160:exon | 30.0% |
| !!! | AGTTGGTTTTTCAGTTAATG+GGG | + | chr8_3:8987467-8987486 | Msa1275160:exon | 30.0% |
| AAAGATCTGTTACTAGGTTT+GGG | + | chr8_3:8987595-8987614 | Msa1275160:CDS | 30.0% | |
| TTTGGGGGAAGATATTAATA+GGG | + | chr8_3:8987612-8987631 | Msa1275160:CDS | 30.0% | |
| GATCCGTAAACAATATCATT+AGG | - | chr8_3:8987745-8987764 | None:intergenic | 30.0% | |
| ! | TGTGTTCGACTTATATTTTC+AGG | + | chr8_3:8987814-8987833 | Msa1275160:intron | 30.0% |
| GTGAGGTTTGAATAATAAGA+AGG | + | chr8_3:8987961-8987980 | Msa1275160:intron | 30.0% | |
| GAGGTTTGAATAATAAGAAG+GGG | + | chr8_3:8987963-8987982 | Msa1275160:intron | 30.0% | |
| AAAACATAAGACATGAACGA+AGG | - | chr8_3:8988029-8988048 | None:intergenic | 30.0% | |
| ! | TTCGTTCATGTCTTATGTTT+TGG | + | chr8_3:8988028-8988047 | Msa1275160:intron | 30.0% |
| CACATTATATATGTAAGGGT+CGG | + | chr8_3:8988237-8988256 | Msa1275160:intron | 30.0% | |
| ACATTATATATGTAAGGGTC+GGG | + | chr8_3:8988238-8988257 | Msa1275160:intron | 30.0% | |
| !! | TCACCTTTAAGGTTAATAAG+TGG | - | chr8_3:8988283-8988302 | None:intergenic | 30.0% |
| GTTTATGAACTTCACCTTTA+AGG | - | chr8_3:8988294-8988313 | None:intergenic | 30.0% | |
| !! | CATACAAACTATTTTCTGGT+TGG | + | chr8_3:8988387-8988406 | Msa1275160:intron | 30.0% |
| !!! | TACAAACTATTTTCTGGTTG+GGG | + | chr8_3:8988389-8988408 | Msa1275160:intron | 30.0% |
| CCATGTTGTTATGCATATTA+TGG | - | chr8_3:8988762-8988781 | None:intergenic | 30.0% | |
| CCATAATATGCATAACAACA+TGG | + | chr8_3:8988759-8988778 | Msa1275160:intron | 30.0% | |
| TTTATCGTATCTTCATGGTT+TGG | - | chr8_3:8988839-8988858 | None:intergenic | 30.0% | |
| TTGACTTTATCGTATCTTCA+TGG | - | chr8_3:8988844-8988863 | None:intergenic | 30.0% | |
| TGTAATTGAGAATTTAGACG+TGG | + | chr8_3:8988891-8988910 | Msa1275160:intron | 30.0% | |
| !!! | TTAGACGTGGTTTTATAGAA+AGG | + | chr8_3:8988904-8988923 | Msa1275160:intron | 30.0% |
| TCGACAATTATCTTAGGTTA+TGG | + | chr8_3:8989163-8989182 | Msa1275160:intron | 30.0% | |
| CGACAATTATCTTAGGTTAT+GGG | + | chr8_3:8989164-8989183 | Msa1275160:intron | 30.0% | |
| GACAATTATCTTAGGTTATG+GGG | + | chr8_3:8989165-8989184 | Msa1275160:intron | 30.0% | |
| ! | GATATTAAACTTTTCTCTGC+AGG | + | chr8_3:8989353-8989372 | Msa1275160:intron | 30.0% |
| TATTATTTAGGCCATCTTCA+GGG | - | chr8_3:8989421-8989440 | None:intergenic | 30.0% | |
| TTATTATTTAGGCCATCTTC+AGG | - | chr8_3:8989422-8989441 | None:intergenic | 30.0% | |
| CGATATCTTTGTATGGAAAA+GGG | - | chr8_3:8989727-8989746 | None:intergenic | 30.0% | |
| TCGATATCTTTGTATGGAAA+AGG | - | chr8_3:8989728-8989747 | None:intergenic | 30.0% | |
| TTTGAGTCGATATCTTTGTA+TGG | - | chr8_3:8989734-8989753 | None:intergenic | 30.0% | |
| !! | ATATCGACTCAAACGATATA+GGG | + | chr8_3:8989741-8989760 | Msa1275160:CDS | 30.0% |
| ! | GTTAAGTTACTTGTTTCTTC+AGG | + | chr8_3:8989767-8989786 | Msa1275160:CDS | 30.0% |
| AGCAATCAGTACTTCTATTA+TGG | + | chr8_3:8989946-8989965 | Msa1275160:CDS | 30.0% | |
| !! | CTCCTACTAGATTTTTGAAA+TGG | + | chr8_3:8990035-8990054 | Msa1275160:CDS | 30.0% |
| GGTTACATTTCTAATACCAA+TGG | + | chr8_3:8990103-8990122 | Msa1275160:CDS | 30.0% | |
| ! | TGTAAAATGGACTTTCCAAT+TGG | - | chr8_3:8990259-8990278 | None:intergenic | 30.0% |
| ! | TCAAACTTCAAGTTCAAGAA+AGG | + | chr8_3:8990302-8990321 | Msa1275160:CDS | 30.0% |
| AAATGTGATTGTAGTTGTTG+AGG | + | chr8_3:8990369-8990388 | Msa1275160:CDS | 30.0% | |
| TCTAGGGGAATTGAAAAATT+TGG | + | chr8_3:8990412-8990431 | Msa1275160:CDS | 30.0% | |
| !! | AGTTGAAAAGTGTCCTAATA+CGG | - | chr8_3:8990458-8990477 | None:intergenic | 30.0% |
| TGCAACATTGCACAAATTTA+GGG | - | chr8_3:8990649-8990668 | None:intergenic | 30.0% | |
| TTGCAACATTGCACAAATTT+AGG | - | chr8_3:8990650-8990669 | None:intergenic | 30.0% | |
| TCAAATGCATTCAAACTGTG+AGG | + | chr8_3:8987498-8987517 | Msa1275160:CDS | 35.0% | |
| CAAAGATCTGTTACTAGGTT+TGG | + | chr8_3:8987594-8987613 | Msa1275160:CDS | 35.0% | |
| AAGATCTGTTACTAGGTTTG+GGG | + | chr8_3:8987596-8987615 | Msa1275160:CDS | 35.0% | |
| GTTTGGGGGAAGATATTAAT+AGG | + | chr8_3:8987611-8987630 | Msa1275160:CDS | 35.0% | |
| ATTTCTTTATGGGGATCTAG+TGG | - | chr8_3:8988125-8988144 | None:intergenic | 35.0% | |
| ATCAACTGAATTATGCTCAC+AGG | - | chr8_3:8988209-8988228 | None:intergenic | 35.0% | |
| CATTATATATGTAAGGGTCG+GGG | + | chr8_3:8988239-8988258 | Msa1275160:intron | 35.0% | |
| !! | CCTTTAAGGTTAATAAGTGG+AGG | - | chr8_3:8988280-8988299 | None:intergenic | 35.0% |
| CCTCCACTTATTAACCTTAA+AGG | + | chr8_3:8988277-8988296 | Msa1275160:intron | 35.0% | |
| !!! | ACAAACTATTTTCTGGTTGG+GGG | + | chr8_3:8988390-8988409 | Msa1275160:intron | 35.0% |
| !! | TAGAATTTGCCTTTCTGGTT+TGG | + | chr8_3:8988783-8988802 | Msa1275160:intron | 35.0% |
| ACTAGATGTTGCCTTTGTAT+AGG | - | chr8_3:8988953-8988972 | None:intergenic | 35.0% | |
| ! | AAAAGTACACATCGTTTCTG+CGG | + | chr8_3:8989251-8989270 | Msa1275160:intron | 35.0% |
| ! | AACTTTTCTCTGCAGGTTAT+AGG | + | chr8_3:8989360-8989379 | Msa1275160:intron | 35.0% |
| AGGTTATAGGCAAAATGTGA+AGG | + | chr8_3:8989373-8989392 | Msa1275160:intron | 35.0% | |
| AATGTGAAGGACATTGTTGA+AGG | + | chr8_3:8989386-8989405 | Msa1275160:CDS | 35.0% | |
| AATAAAATTGGTCATGGTGG+TGG | + | chr8_3:8989440-8989459 | Msa1275160:CDS | 35.0% | |
| AAGACTCACAATAAGAGTAG+AGG | - | chr8_3:8989499-8989518 | None:intergenic | 35.0% | |
| ! | ACATGACACTTGACTTGAAA+TGG | - | chr8_3:8989530-8989549 | None:intergenic | 35.0% |
| ! | TTTCAAGTCAAGTGTCATGT+TGG | + | chr8_3:8989530-8989549 | Msa1275160:CDS | 35.0% |
| !! | GATATCGACTCAAACGATAT+AGG | + | chr8_3:8989740-8989759 | Msa1275160:CDS | 35.0% |
| ! | TTACTTGTTTCTTCAGGATC+TGG | + | chr8_3:8989773-8989792 | Msa1275160:CDS | 35.0% |
| GAAACTTCAGCATATAGAGA+AGG | - | chr8_3:8989914-8989933 | None:intergenic | 35.0% | |
| CATTTCTAATACCAATGGAG+AGG | + | chr8_3:8990108-8990127 | Msa1275160:CDS | 35.0% | |
| ! | CATCATTTGCTTCCCTTTTA+TGG | + | chr8_3:8990193-8990212 | Msa1275160:CDS | 35.0% |
| TCTAAAGGATGCAATCCAAT+TGG | + | chr8_3:8990241-8990260 | Msa1275160:CDS | 35.0% | |
| TTTCAACTAATCTTGCTGCA+AGG | + | chr8_3:8990470-8990489 | Msa1275160:CDS | 35.0% | |
| TGGAATACTCTCCAAAAACT+TGG | - | chr8_3:8990497-8990516 | None:intergenic | 35.0% | |
| ATTCTACCACATGTCATATG+AGG | - | chr8_3:8990611-8990630 | None:intergenic | 35.0% | |
| GGCTGAAGATTTGAAAACTT+TGG | + | chr8_3:8990767-8990786 | Msa1275160:three_prime_UTR | 35.0% | |
| !! | TTACCATGTGATAATGGTCA+TGG | + | chr8_3:8990830-8990849 | Msa1275160:three_prime_UTR | 35.0% |
| AATCCATGACCATTATCACA+TGG | - | chr8_3:8990836-8990855 | None:intergenic | 35.0% | |
| TTTCAGTTAATGGGGTCGTT+TGG | + | chr8_3:8987475-8987494 | Msa1275160:exon | 40.0% | |
| ATCTTTGACTGCACACTCAA+TGG | - | chr8_3:8987581-8987600 | None:intergenic | 40.0% | |
| GCAGTCAAAGATCTGTTACT+AGG | + | chr8_3:8987589-8987608 | Msa1275160:CDS | 40.0% | |
| AGATCTGTTACTAGGTTTGG+GGG | + | chr8_3:8987597-8987616 | Msa1275160:CDS | 40.0% | |
| GGGGAAGATATTAATAGGGA+AGG | + | chr8_3:8987616-8987635 | Msa1275160:CDS | 40.0% | |
| AGATCATAGTTACTCACCTC+TGG | - | chr8_3:8987689-8987708 | None:intergenic | 40.0% | |
| ACATAAGACATGAACGAAGG+TGG | - | chr8_3:8988026-8988045 | None:intergenic | 40.0% | |
| ATGGGTAGAATTTGCCTTTC+TGG | + | chr8_3:8988778-8988797 | Msa1275160:intron | 40.0% | |
| ! | CATGTTGGTTATATCCCTTC+AGG | + | chr8_3:8989545-8989564 | Msa1275160:CDS | 40.0% |
| ATGTGTTCAGCTTTGCATCA+AGG | + | chr8_3:8989656-8989675 | Msa1275160:CDS | 40.0% | |
| TGTGTTCAGCTTTGCATCAA+GGG | + | chr8_3:8989657-8989676 | Msa1275160:CDS | 40.0% | |
| AGTATGATAGCAACTCCTTC+TGG | - | chr8_3:8989689-8989708 | None:intergenic | 40.0% | |
| AAGGACCACTAGATCAATGT+TGG | + | chr8_3:8989885-8989904 | Msa1275160:CDS | 40.0% | |
| ! | CTTTAGGAGAAGATCCAACA+AGG | + | chr8_3:8989996-8990015 | Msa1275160:CDS | 40.0% |
| TCTACAAGCTCTTTCCTTGT+TGG | - | chr8_3:8990013-8990032 | None:intergenic | 40.0% | |
| CTAATACCAATGGAGAGGTA+AGG | + | chr8_3:8990113-8990132 | Msa1275160:CDS | 40.0% | |
| ATCAAACCTTACCTCTCCAT+TGG | - | chr8_3:8990122-8990141 | None:intergenic | 40.0% | |
| ! | AGAGGTAAGGTTTGATGACA+AGG | + | chr8_3:8990126-8990145 | Msa1275160:CDS | 40.0% |
| ! | CTGAAGTGAACTTGCCTTTT+TGG | + | chr8_3:8990158-8990177 | Msa1275160:CDS | 40.0% |
| TGCTCACATTGTGACCAAAA+AGG | - | chr8_3:8990175-8990194 | None:intergenic | 40.0% | |
| TGCAGAAACCATTTCACCAT+TGG | + | chr8_3:8990339-8990358 | Msa1275160:CDS | 40.0% | |
| GAAACCATTTCACCATTGGT+AGG | + | chr8_3:8990343-8990362 | Msa1275160:CDS | 40.0% | |
| ATCACATTTCCACCTACCAA+TGG | - | chr8_3:8990358-8990377 | None:intergenic | 40.0% | |
| TCACACTTGCATGATCTCTA+GGG | + | chr8_3:8990396-8990415 | Msa1275160:CDS | 40.0% | |
| ! | AAAGTGTCCTAATACGGCAA+TGG | - | chr8_3:8990452-8990471 | None:intergenic | 40.0% |
| CAAGTGCTACATCTCTTGAA+GGG | + | chr8_3:8990515-8990534 | Msa1275160:CDS | 40.0% | |
| AGTCTTCCTCATATGACATG+TGG | + | chr8_3:8990602-8990621 | Msa1275160:three_prime_UTR | 40.0% | |
| GACACCATTTCGTGTTGCAA+AGG | + | chr8_3:8987648-8987667 | Msa1275160:CDS | 45.0% | |
| AAGGCCTTTGCAACACGAAA+TGG | - | chr8_3:8987655-8987674 | None:intergenic | 45.0% | |
| ! | GTTGCAAAGGCCTTTTCTGA+AGG | + | chr8_3:8987661-8987680 | Msa1275160:CDS | 45.0% |
| ! | ACCTCTGGTTCCTTCAGAAA+AGG | - | chr8_3:8987674-8987693 | None:intergenic | 45.0% |
| TTCCGTTCGATTCTCTCCTA+GGG | + | chr8_3:8988806-8988825 | Msa1275160:intron | 45.0% | |
| !! | ATGGTTTGGTTCTATCCCCT+AGG | - | chr8_3:8988825-8988844 | None:intergenic | 45.0% |
| !!! | TGTACTTTTGAGATCCGCTG+TGG | - | chr8_3:8989240-8989259 | None:intergenic | 45.0% |
| GGTGCATTATTCCCTGAAGA+TGG | + | chr8_3:8989407-8989426 | Msa1275160:CDS | 45.0% | |
| TGCTTAAGCCTACCACTCTT+TGG | - | chr8_3:8989571-8989590 | None:intergenic | 45.0% | |
| ATCTCATCTGCTAAACGCTG+AGG | - | chr8_3:8989638-8989657 | None:intergenic | 45.0% | |
| CATCAAGGGATACAACCAGA+AGG | + | chr8_3:8989671-8989690 | Msa1275160:CDS | 45.0% | |
| TCGACTCAAACGATATAGGG+TGG | + | chr8_3:8989744-8989763 | Msa1275160:CDS | 45.0% | |
| CGACTCAAACGATATAGGGT+GGG | + | chr8_3:8989745-8989764 | Msa1275160:CDS | 45.0% | |
| GGACACCAACATTGATCTAG+TGG | - | chr8_3:8989893-8989912 | None:intergenic | 45.0% | |
| ACCATTTCACCATTGGTAGG+TGG | + | chr8_3:8990346-8990365 | Msa1275160:CDS | 45.0% | |
| TCCACCTACCAATGGTGAAA+TGG | - | chr8_3:8990350-8990369 | None:intergenic | 45.0% | |
| GTCACACTTGCATGATCTCT+AGG | + | chr8_3:8990395-8990414 | Msa1275160:CDS | 45.0% | |
| CACACTTGCATGATCTCTAG+GGG | + | chr8_3:8990397-8990416 | Msa1275160:CDS | 45.0% | |
| TCCTAATACGGCAATGGTTG+CGG | - | chr8_3:8990446-8990465 | None:intergenic | 45.0% | |
| ! | TGCTGCAAGGACCAAGTTTT+TGG | + | chr8_3:8990483-8990502 | Msa1275160:CDS | 45.0% |
| CCTTCAAGAGATGTAGCACT+TGG | - | chr8_3:8990517-8990536 | None:intergenic | 45.0% | |
| CCAAGTGCTACATCTCTTGA+AGG | + | chr8_3:8990514-8990533 | Msa1275160:CDS | 45.0% | |
| !!! | AAAATAAAATTTTTTTTCTT+TGG | + | chr8_3:8988616-8988635 | Msa1275160:intron | 5.0% |
| !! | TTTATAAAAAAATTCTTATA+AGG | - | chr8_3:8989020-8989039 | None:intergenic | 5.0% |
| !! | TTATTTATAGATTTATTTAT+GGG | - | chr8_3:8990565-8990584 | None:intergenic | 5.0% |
| !! | TTTATTTATAGATTTATTTA+TGG | - | chr8_3:8990566-8990585 | None:intergenic | 5.0% |
| !! | GCCTTTTCTGAAGGAACCAG+AGG | + | chr8_3:8987670-8987689 | Msa1275160:CDS | 50.0% |
| ! | AAAGCATCTGGTGACAGGGA+CGG | - | chr8_3:8988003-8988022 | None:intergenic | 50.0% |
| !! | GTGGAAAGCATCTGGTGACA+GGG | - | chr8_3:8988007-8988026 | None:intergenic | 50.0% |
| !! | GAACGAAGGTGGAAAGCATC+TGG | - | chr8_3:8988015-8988034 | None:intergenic | 50.0% |
| CGAACGGAACCAAACCAGAA+AGG | - | chr8_3:8988795-8988814 | None:intergenic | 50.0% | |
| GTTCCGTTCGATTCTCTCCT+AGG | + | chr8_3:8988805-8988824 | Msa1275160:intron | 50.0% | |
| TCCGTTCGATTCTCTCCTAG+GGG | + | chr8_3:8988807-8988826 | Msa1275160:intron | 50.0% | |
| TCCCCTAGGAGAGAATCGAA+CGG | - | chr8_3:8988811-8988830 | None:intergenic | 50.0% | |
| !! | ATTGGTCATGGTGGTGGAGT+AGG | + | chr8_3:8989446-8989465 | Msa1275160:CDS | 50.0% |
| TATCCCTTCAGGCCAAAGAG+TGG | + | chr8_3:8989556-8989575 | Msa1275160:CDS | 50.0% | |
| CTACCACTCTTTGGCCTGAA+GGG | - | chr8_3:8989562-8989581 | None:intergenic | 50.0% | |
| CTTAAGCAAGCTTCCTCGTG+TGG | + | chr8_3:8989583-8989602 | Msa1275160:CDS | 50.0% | |
| ACCGCAACCATTGCCGTATT+AGG | + | chr8_3:8990442-8990461 | Msa1275160:CDS | 50.0% | |
| AAGCATCTGGTGACAGGGAC+GGG | - | chr8_3:8988002-8988021 | None:intergenic | 55.0% | |
| !! | GGTGGAAAGCATCTGGTGAC+AGG | - | chr8_3:8988008-8988027 | None:intergenic | 55.0% |
| CCTACCACTCTTTGGCCTGA+AGG | - | chr8_3:8989563-8989582 | None:intergenic | 55.0% | |
| CCTTCAGGCCAAAGAGTGGT+AGG | + | chr8_3:8989560-8989579 | Msa1275160:CDS | 55.0% | |
| AAGCAAGCTTCCTCGTGTGG+CGG | + | chr8_3:8989586-8989605 | Msa1275160:CDS | 55.0% | |
| AGCATCTGGTGACAGGGACG+GGG | - | chr8_3:8988001-8988020 | None:intergenic | 60.0% | |
| !! | GGTCATGGTGGTGGAGTAGG+TGG | + | chr8_3:8989449-8989468 | Msa1275160:CDS | 60.0% |
| GCAAATGCTTCCGCCACACG+AGG | - | chr8_3:8989599-8989618 | None:intergenic | 60.0% | |
| GCATCTGGTGACAGGGACGG+GGG | - | chr8_3:8988000-8988019 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 8987414 | 8990864 | 8987414 | ID=Msa1275160;Name=Msa1275160 |
| chr8_3 | mRNA | 8987414 | 8990864 | 8987414 | ID=Msa1275160-mRNA-1;Parent=Msa1275160;Name=Msa1275160-mRNA-1;_AED=0.01;_eAED=0.01;_QI=70|1|1|1|1|1|2|321|458 |
| chr8_3 | exon | 8987414 | 8987691 | 8987414 | ID=Msa1275160-mRNA-1:exon:3786;Parent=Msa1275160-mRNA-1 |
| chr8_3 | exon | 8989375 | 8990864 | 8989375 | ID=Msa1275160-mRNA-1:exon:3787;Parent=Msa1275160-mRNA-1 |
| chr8_3 | five_prime_UTR | 8987414 | 8987483 | 8987414 | ID=Msa1275160-mRNA-1:five_prime_utr;Parent=Msa1275160-mRNA-1 |
| chr8_3 | CDS | 8987484 | 8987691 | 8987484 | ID=Msa1275160-mRNA-1:cds;Parent=Msa1275160-mRNA-1 |
| chr8_3 | CDS | 8989375 | 8990543 | 8989375 | ID=Msa1275160-mRNA-1:cds;Parent=Msa1275160-mRNA-1 |
| chr8_3 | three_prime_UTR | 8990544 | 8990864 | 8990544 | ID=Msa1275160-mRNA-1:three_prime_utr;Parent=Msa1275160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
