Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447100 | sp|Q940H3|TBL36_ARATH | 61.741 | 379 | 131 | 6 | 2 | 376 | 4 | 372 | 3.90e-172 | 488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447100 | A0A072VSC4 | 95.288 | 382 | 14 | 1 | 1 | 378 | 1 | 382 | 0.0 | 765 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa1447100 | 0.805871 | 1.083039e-49 | -8.615850e-47 |
| Msa0013270 | Msa1447100 | 0.814080 | 1.848435e-51 | -8.615850e-47 |
| Msa0019900 | Msa1447100 | 0.804511 | 2.085549e-49 | -8.615850e-47 |
| Msa0025160 | Msa1447100 | 0.840937 | 6.434076e-58 | -8.615850e-47 |
| Msa0029380 | Msa1447100 | 0.807201 | 5.674300e-50 | -8.615850e-47 |
| Msa0033220 | Msa1447100 | 0.807524 | 4.845588e-50 | -8.615850e-47 |
| Msa0044160 | Msa1447100 | 0.981018 | 1.403903e-151 | -8.615850e-47 |
| Msa0045810 | Msa1447100 | 0.833445 | 5.310308e-56 | -8.615850e-47 |
| Msa0046200 | Msa1447100 | 0.811536 | 6.667543e-51 | -8.615850e-47 |
| Msa0062190 | Msa1447100 | 0.819967 | 8.795187e-53 | -8.615850e-47 |
| Msa0072520 | Msa1447100 | 0.814740 | 1.320764e-51 | -8.615850e-47 |
| Msa0077340 | Msa1447100 | 0.832895 | 7.278480e-56 | -8.615850e-47 |
| Msa0077560 | Msa1447100 | 0.837443 | 5.183536e-57 | -8.615850e-47 |
| Msa0106540 | Msa1447100 | 0.824031 | 1.005965e-53 | -8.615850e-47 |
| Msa0108630 | Msa1447100 | 0.804758 | 1.852192e-49 | -8.615850e-47 |
| Msa1349690 | Msa1447100 | 0.804938 | 1.698509e-49 | -8.615850e-47 |
| Msa1365820 | Msa1447100 | 0.808529 | 2.961945e-50 | -8.615850e-47 |
| Msa1368390 | Msa1447100 | 0.822554 | 2.225936e-53 | -8.615850e-47 |
| Msa1368750 | Msa1447100 | 0.813968 | 1.956800e-51 | -8.615850e-47 |
| Msa1374790 | Msa1447100 | 0.807192 | 5.698250e-50 | -8.615850e-47 |
| Msa1381030 | Msa1447100 | 0.806307 | 8.764071e-50 | -8.615850e-47 |
| Msa1387440 | Msa1447100 | 0.806015 | 1.009844e-49 | -8.615850e-47 |
| Msa1391500 | Msa1447100 | 0.826512 | 2.605032e-54 | -8.615850e-47 |
| Msa1398810 | Msa1447100 | 0.836190 | 1.082078e-56 | -8.615850e-47 |
| Msa1405460 | Msa1447100 | 0.809923 | 1.488195e-50 | -8.615850e-47 |
| Msa1405830 | Msa1447100 | 0.823256 | 1.527792e-53 | -8.615850e-47 |
| Msa1407810 | Msa1447100 | 0.816783 | 4.627730e-52 | -8.615850e-47 |
| Msa1407840 | Msa1447100 | 0.829667 | 4.527933e-55 | -8.615850e-47 |
| Msa1409410 | Msa1447100 | 0.802281 | 6.043752e-49 | -8.615850e-47 |
| Msa1413130 | Msa1447100 | 0.810266 | 1.255594e-50 | -8.615850e-47 |
| Msa1422860 | Msa1447100 | 0.816004 | 6.914121e-52 | -8.615850e-47 |
| Msa1433360 | Msa1447100 | 0.838140 | 3.431086e-57 | -8.615850e-47 |
| Msa1437780 | Msa1447100 | 0.816189 | 6.285118e-52 | -8.615850e-47 |
| Msa1437810 | Msa1447100 | 0.830326 | 3.127973e-55 | -8.615850e-47 |
| Msa1439250 | Msa1447100 | 0.800223 | 1.594198e-48 | -8.615850e-47 |
| Msa1440430 | Msa1447100 | 0.810389 | 1.180937e-50 | -8.615850e-47 |
| Msa1441960 | Msa1447100 | 0.806216 | 9.162278e-50 | -8.615850e-47 |
| Msa1445530 | Msa1447100 | 0.806849 | 6.735170e-50 | -8.615850e-47 |
| Msa1447100 | Msa1449900 | 0.972490 | 7.501452e-135 | -8.615850e-47 |
| Msa1447100 | Msa1451820 | 0.811802 | 5.836045e-51 | -8.615850e-47 |
| Msa1447100 | Msa1454500 | 0.827853 | 1.243505e-54 | -8.615850e-47 |
| Msa1447100 | Msa1457770 | 0.808910 | 2.455109e-50 | -8.615850e-47 |
| Msa1447100 | Msa1461370 | 0.805130 | 1.548995e-49 | -8.615850e-47 |
| Msa0607800 | Msa1447100 | 0.800517 | 1.388695e-48 | -8.615850e-47 |
| Msa0610690 | Msa1447100 | 0.821915 | 3.131699e-53 | -8.615850e-47 |
| Msa0610700 | Msa1447100 | -0.806589 | 7.642667e-50 | -8.615850e-47 |
| Msa0636540 | Msa1447100 | 0.803255 | 3.804298e-49 | -8.615850e-47 |
| Msa0641990 | Msa1447100 | 0.803112 | 4.071980e-49 | -8.615850e-47 |
| Msa0648970 | Msa1447100 | 0.826073 | 3.312597e-54 | -8.615850e-47 |
| Msa0652770 | Msa1447100 | 0.800308 | 1.531688e-48 | -8.615850e-47 |
| Msa0657710 | Msa1447100 | 0.836859 | 7.308018e-57 | -8.615850e-47 |
| Msa0657720 | Msa1447100 | 0.824091 | 9.737359e-54 | -8.615850e-47 |
| Msa0662820 | Msa1447100 | 0.811507 | 6.764845e-51 | -8.615850e-47 |
| Msa0682770 | Msa1447100 | 0.805065 | 1.597913e-49 | -8.615850e-47 |
| Msa0686040 | Msa1447100 | 0.808073 | 3.704730e-50 | -8.615850e-47 |
| Msa0687580 | Msa1447100 | 0.817092 | 3.945931e-52 | -8.615850e-47 |
| Msa0691490 | Msa1447100 | 0.815853 | 7.471859e-52 | -8.615850e-47 |
| Msa0692790 | Msa1447100 | 0.816350 | 5.785964e-52 | -8.615850e-47 |
| Msa0702790 | Msa1447100 | 0.824552 | 7.589374e-54 | -8.615850e-47 |
| Msa0702800 | Msa1447100 | 0.837307 | 5.616671e-57 | -8.615850e-47 |
| Msa0703950 | Msa1447100 | 0.863604 | 2.210590e-64 | -8.615850e-47 |
| Msa0709440 | Msa1447100 | 0.814559 | 1.448258e-51 | -8.615850e-47 |
| Msa0716480 | Msa1447100 | 0.805603 | 1.232924e-49 | -8.615850e-47 |
| Msa0722890 | Msa1447100 | 0.837501 | 5.007632e-57 | -8.615850e-47 |
| Msa0723090 | Msa1447100 | 0.853983 | 1.665184e-61 | -8.615850e-47 |
| Msa0745140 | Msa1447100 | 0.833473 | 5.226471e-56 | -8.615850e-47 |
| Msa0772220 | Msa1447100 | 0.839704 | 1.351456e-57 | -8.615850e-47 |
| Msa0776640 | Msa1447100 | 0.835598 | 1.528825e-56 | -8.615850e-47 |
| Msa0780910 | Msa1447100 | 0.817412 | 3.342539e-52 | -8.615850e-47 |
| Msa0795750 | Msa1447100 | 0.817630 | 2.985643e-52 | -8.615850e-47 |
| Msa0821160 | Msa1447100 | 0.829271 | 5.650549e-55 | -8.615850e-47 |
| Msa0825920 | Msa1447100 | 0.833457 | 5.276513e-56 | -8.615850e-47 |
| Msa0828950 | Msa1447100 | 0.818285 | 2.122862e-52 | -8.615850e-47 |
| Msa0828960 | Msa1447100 | 0.839537 | 1.493504e-57 | -8.615850e-47 |
| Msa0837460 | Msa1447100 | 0.805988 | 1.023236e-49 | -8.615850e-47 |
| Msa0838620 | Msa1447100 | -0.800101 | 1.687864e-48 | -8.615850e-47 |
| Msa0123070 | Msa1447100 | 0.819846 | 9.372414e-53 | -8.615850e-47 |
| Msa0124910 | Msa1447100 | 0.853638 | 2.093262e-61 | -8.615850e-47 |
| Msa0125360 | Msa1447100 | 0.843499 | 1.349207e-58 | -8.615850e-47 |
| Msa0127770 | Msa1447100 | 0.973079 | 7.980454e-136 | -8.615850e-47 |
| Msa0139500 | Msa1447100 | 0.826887 | 2.119397e-54 | -8.615850e-47 |
| Msa0142430 | Msa1447100 | 0.826872 | 2.137236e-54 | -8.615850e-47 |
| Msa0143590 | Msa1447100 | 0.801083 | 1.064359e-48 | -8.615850e-47 |
| Msa0165640 | Msa1447100 | 0.807023 | 6.187448e-50 | -8.615850e-47 |
| Msa0169410 | Msa1447100 | 0.820723 | 5.898525e-53 | -8.615850e-47 |
| Msa0183710 | Msa1447100 | 0.991519 | 4.437886e-188 | -8.615850e-47 |
| Msa0184500 | Msa1447100 | 0.802606 | 5.179094e-49 | -8.615850e-47 |
| Msa0195230 | Msa1447100 | 0.800478 | 1.414193e-48 | -8.615850e-47 |
| Msa0203080 | Msa1447100 | 0.840862 | 6.732448e-58 | -8.615850e-47 |
| Msa0204950 | Msa1447100 | 0.802121 | 6.520846e-49 | -8.615850e-47 |
| Msa0235290 | Msa1447100 | 0.822487 | 2.307120e-53 | -8.615850e-47 |
| Msa1228580 | Msa1447100 | 0.808614 | 2.840385e-50 | -8.615850e-47 |
| Msa1254100 | Msa1447100 | 0.833726 | 4.519136e-56 | -8.615850e-47 |
| Msa1257200 | Msa1447100 | 0.801752 | 7.763011e-49 | -8.615850e-47 |
| Msa1262590 | Msa1447100 | 0.841001 | 6.191769e-58 | -8.615850e-47 |
| Msa1275160 | Msa1447100 | 0.811139 | 8.129272e-51 | -8.615850e-47 |
| Msa1283930 | Msa1447100 | 0.822383 | 2.440168e-53 | -8.615850e-47 |
| Msa1306820 | Msa1447100 | 0.805500 | 1.295256e-49 | -8.615850e-47 |
| Msa1322960 | Msa1447100 | 0.816372 | 5.719936e-52 | -8.615850e-47 |
| Msa1323070 | Msa1447100 | 0.807587 | 4.699472e-50 | -8.615850e-47 |
| Msa1326710 | Msa1447100 | 0.816315 | 5.893208e-52 | -8.615850e-47 |
| Msa1327800 | Msa1447100 | 0.802293 | 6.009335e-49 | -8.615850e-47 |
| Msa1338540 | Msa1447100 | 0.806051 | 9.924130e-50 | -8.615850e-47 |
| Msa1341840 | Msa1447100 | 0.805559 | 1.258871e-49 | -8.615850e-47 |
| Msa0365210 | Msa1447100 | 0.812635 | 3.839916e-51 | -8.615850e-47 |
| Msa0375640 | Msa1447100 | 0.840728 | 7.298891e-58 | -8.615850e-47 |
| Msa0387930 | Msa1447100 | 0.816831 | 4.515186e-52 | -8.615850e-47 |
| Msa0401060 | Msa1447100 | 0.811067 | 8.425123e-51 | -8.615850e-47 |
| Msa0401970 | Msa1447100 | 0.812744 | 3.633407e-51 | -8.615850e-47 |
| Msa0424140 | Msa1447100 | 0.807334 | 5.318919e-50 | -8.615850e-47 |
| Msa0424160 | Msa1447100 | 0.839189 | 1.838408e-57 | -8.615850e-47 |
| Msa0432010 | Msa1447100 | 0.813030 | 3.145736e-51 | -8.615850e-47 |
| Msa0437480 | Msa1447100 | 0.855941 | 4.498741e-62 | -8.615850e-47 |
| Msa0437520 | Msa1447100 | 0.982798 | 4.996792e-156 | -8.615850e-47 |
| Msa0440350 | Msa1447100 | 0.864217 | 1.425297e-64 | -8.615850e-47 |
| Msa0481890 | Msa1447100 | 0.813877 | 2.049516e-51 | -8.615850e-47 |
| Msa0980290 | Msa1447100 | 0.819475 | 1.138985e-52 | -8.615850e-47 |
| Msa1013190 | Msa1447100 | 0.807258 | 5.517820e-50 | -8.615850e-47 |
| Msa1022420 | Msa1447100 | 0.822266 | 2.597578e-53 | -8.615850e-47 |
| Msa1031170 | Msa1447100 | 0.802354 | 5.839379e-49 | -8.615850e-47 |
| Msa1031410 | Msa1447100 | 0.838597 | 2.616565e-57 | -8.615850e-47 |
| Msa1041060 | Msa1447100 | 0.810817 | 9.546545e-51 | -8.615850e-47 |
| Msa1044250 | Msa1447100 | 0.862680 | 4.270171e-64 | -8.615850e-47 |
| Msa1045230 | Msa1447100 | 0.812720 | 3.678144e-51 | -8.615850e-47 |
| Msa1045280 | Msa1447100 | 0.801912 | 7.197331e-49 | -8.615850e-47 |
| Msa1072940 | Msa1447100 | 0.806126 | 9.568399e-50 | -8.615850e-47 |
| Msa1074900 | Msa1447100 | 0.807178 | 5.738044e-50 | -8.615850e-47 |
| Msa1081970 | Msa1447100 | 0.833307 | 5.750106e-56 | -8.615850e-47 |
| Msa1082410 | Msa1447100 | 0.855219 | 7.305093e-62 | -8.615850e-47 |
| Msa1084530 | Msa1447100 | 0.805007 | 1.643273e-49 | -8.615850e-47 |
| Msa1088320 | Msa1447100 | 0.816101 | 6.578405e-52 | -8.615850e-47 |
| Msa1101160 | Msa1447100 | 0.801564 | 8.484593e-49 | -8.615850e-47 |
| Msa1106590 | Msa1447100 | 0.843183 | 1.638668e-58 | -8.615850e-47 |
| Msa0246210 | Msa1447100 | 0.824102 | 9.678561e-54 | -8.615850e-47 |
| Msa0249850 | Msa1447100 | 0.806611 | 7.562547e-50 | -8.615850e-47 |
| Msa0269210 | Msa1447100 | 0.804757 | 1.852831e-49 | -8.615850e-47 |
| Msa0276860 | Msa1447100 | 0.834805 | 2.423794e-56 | -8.615850e-47 |
| Msa0281470 | Msa1447100 | 0.814586 | 1.429085e-51 | -8.615850e-47 |
| Msa0284800 | Msa1447100 | 0.843534 | 1.321032e-58 | -8.615850e-47 |
| Msa0288620 | Msa1447100 | 0.807755 | 4.329989e-50 | -8.615850e-47 |
| Msa0307270 | Msa1447100 | 0.807358 | 5.254693e-50 | -8.615850e-47 |
| Msa0313900 | Msa1447100 | 0.837601 | 4.721251e-57 | -8.615850e-47 |
| Msa0326710 | Msa1447100 | 0.814550 | 1.455296e-51 | -8.615850e-47 |
| Msa0330520 | Msa1447100 | 0.863697 | 2.068900e-64 | -8.615850e-47 |
| Msa0334660 | Msa1447100 | 0.806846 | 6.746726e-50 | -8.615850e-47 |
| Msa0354840 | Msa1447100 | 0.860157 | 2.512197e-63 | -8.615850e-47 |
| Msa1125820 | Msa1447100 | 0.810065 | 1.387120e-50 | -8.615850e-47 |
| Msa1125990 | Msa1447100 | 0.813724 | 2.214452e-51 | -8.615850e-47 |
| Msa1147700 | Msa1447100 | 0.832542 | 8.907652e-56 | -8.615850e-47 |
| Msa1149910 | Msa1447100 | 0.816714 | 4.796029e-52 | -8.615850e-47 |
| Msa1158200 | Msa1447100 | 0.810324 | 1.219612e-50 | -8.615850e-47 |
| Msa1165460 | Msa1447100 | 0.815196 | 1.046248e-51 | -8.615850e-47 |
| Msa1169660 | Msa1447100 | 0.832867 | 7.396594e-56 | -8.615850e-47 |
| Msa1171290 | Msa1447100 | 0.815821 | 7.595923e-52 | -8.615850e-47 |
| Msa1192360 | Msa1447100 | 0.803502 | 3.381094e-49 | -8.615850e-47 |
| Msa1194240 | Msa1447100 | 0.805271 | 1.446898e-49 | -8.615850e-47 |
| Msa0490430 | Msa1447100 | 0.810005 | 1.428974e-50 | -8.615850e-47 |
| Msa0500650 | Msa1447100 | 0.801757 | 7.743516e-49 | -8.615850e-47 |
| Msa0515800 | Msa1447100 | 0.828159 | 1.049828e-54 | -8.615850e-47 |
| Msa0519760 | Msa1447100 | 0.805573 | 1.250752e-49 | -8.615850e-47 |
| Msa0519810 | Msa1447100 | 0.801258 | 9.799666e-49 | -8.615850e-47 |
| Msa0519840 | Msa1447100 | 0.804955 | 1.685005e-49 | -8.615850e-47 |
| Msa0529030 | Msa1447100 | 0.806904 | 6.558230e-50 | -8.615850e-47 |
| Msa0531960 | Msa1447100 | 0.801027 | 1.092824e-48 | -8.615850e-47 |
| Msa0533990 | Msa1447100 | 0.801244 | 9.867639e-49 | -8.615850e-47 |
| Msa0554880 | Msa1447100 | 0.820931 | 5.283244e-53 | -8.615850e-47 |
| Msa0567330 | Msa1447100 | 0.824689 | 7.045351e-54 | -8.615850e-47 |
| Msa0574900 | Msa1447100 | 0.824293 | 8.728919e-54 | -8.615850e-47 |
| Msa0576320 | Msa1447100 | 0.815086 | 1.107191e-51 | -8.615850e-47 |
| Msa0577790 | Msa1447100 | 0.801066 | 1.072924e-48 | -8.615850e-47 |
| Msa0579160 | Msa1447100 | 0.808163 | 3.545194e-50 | -8.615850e-47 |
| Msa0579220 | Msa1447100 | 0.806351 | 8.578630e-50 | -8.615850e-47 |
| Msa0581060 | Msa1447100 | 0.800614 | 1.327086e-48 | -8.615850e-47 |
| Msa0851850 | Msa1447100 | 0.822545 | 2.237250e-53 | -8.615850e-47 |
| Msa0865420 | Msa1447100 | 0.854349 | 1.306107e-61 | -8.615850e-47 |
| Msa0865450 | Msa1447100 | 0.800596 | 1.338428e-48 | -8.615850e-47 |
| Msa0878280 | Msa1447100 | 0.826180 | 3.125509e-54 | -8.615850e-47 |
| Msa0880910 | Msa1447100 | 0.830993 | 2.147059e-55 | -8.615850e-47 |
| Msa0903340 | Msa1447100 | 0.800738 | 1.251914e-48 | -8.615850e-47 |
| Msa0909260 | Msa1447100 | 0.807620 | 4.625346e-50 | -8.615850e-47 |
| Msa0931680 | Msa1447100 | 0.809251 | 2.075384e-50 | -8.615850e-47 |
| Msa0967780 | Msa1447100 | 0.840988 | 6.238778e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447100 | MtrunA17_Chr1g0210771 | 95.288 | 382 | 14 | 1 | 1 | 378 | 1 | 382 | 0.0 | 765 |
| Msa1447100 | MtrunA17_Chr1g0171171 | 73.615 | 379 | 95 | 3 | 1 | 378 | 1 | 375 | 0.0 | 603 |
| Msa1447100 | MtrunA17_Chr3g0105301 | 42.216 | 334 | 175 | 5 | 55 | 374 | 43 | 372 | 8.30e-99 | 298 |
| Msa1447100 | MtrunA17_Chr5g0430371 | 40.233 | 343 | 181 | 5 | 53 | 374 | 56 | 395 | 2.20e-98 | 298 |
| Msa1447100 | MtrunA17_Chr2g0283581 | 42.598 | 331 | 169 | 6 | 55 | 378 | 42 | 358 | 5.02e-96 | 290 |
| Msa1447100 | MtrunA17_Chr4g0006991 | 42.075 | 347 | 177 | 8 | 53 | 378 | 84 | 427 | 1.78e-92 | 283 |
| Msa1447100 | MtrunA17_Chr2g0325481 | 39.759 | 332 | 179 | 6 | 54 | 378 | 49 | 366 | 4.00e-92 | 281 |
| Msa1447100 | MtrunA17_Chr3g0097891 | 42.216 | 334 | 169 | 7 | 55 | 378 | 31 | 350 | 4.71e-92 | 280 |
| Msa1447100 | MtrunA17_Chr7g0258851 | 39.211 | 380 | 207 | 8 | 19 | 378 | 212 | 587 | 4.01e-90 | 283 |
| Msa1447100 | MtrunA17_Chr2g0314791 | 42.687 | 335 | 167 | 8 | 53 | 378 | 27 | 345 | 2.97e-89 | 273 |
| Msa1447100 | MtrunA17_Chr1g0175671 | 41.499 | 347 | 183 | 7 | 50 | 378 | 165 | 509 | 1.19e-88 | 277 |
| Msa1447100 | MtrunA17_Chr2g0314801 | 39.640 | 333 | 180 | 6 | 51 | 374 | 29 | 349 | 5.79e-88 | 270 |
| Msa1447100 | MtrunA17_Chr5g0413851 | 37.534 | 373 | 208 | 8 | 14 | 378 | 4 | 359 | 1.48e-86 | 266 |
| Msa1447100 | MtrunA17_Chr5g0413271 | 37.265 | 373 | 217 | 9 | 15 | 378 | 112 | 476 | 2.16e-85 | 267 |
| Msa1447100 | MtrunA17_Chr4g0041011 | 38.024 | 334 | 180 | 8 | 55 | 378 | 47 | 363 | 2.66e-85 | 263 |
| Msa1447100 | MtrunA17_Chr7g0242701 | 40.058 | 347 | 184 | 8 | 53 | 378 | 84 | 427 | 8.63e-85 | 264 |
| Msa1447100 | MtrunA17_Chr7g0269991 | 36.716 | 335 | 189 | 5 | 55 | 374 | 137 | 463 | 1.85e-84 | 264 |
| Msa1447100 | MtrunA17_Chr1g0213281 | 37.662 | 385 | 215 | 8 | 17 | 378 | 133 | 515 | 2.42e-84 | 266 |
| Msa1447100 | MtrunA17_Chr8g0360521 | 39.884 | 346 | 179 | 10 | 55 | 378 | 71 | 409 | 5.31e-83 | 259 |
| Msa1447100 | MtrunA17_Chr3g0113671 | 40.517 | 348 | 171 | 10 | 55 | 374 | 106 | 445 | 9.48e-83 | 259 |
| Msa1447100 | MtrunA17_Chr4g0045951 | 37.500 | 376 | 205 | 10 | 12 | 378 | 8 | 362 | 9.50e-83 | 256 |
| Msa1447100 | MtrunA17_Chr4g0045941 | 36.047 | 344 | 200 | 6 | 42 | 378 | 20 | 350 | 1.93e-82 | 255 |
| Msa1447100 | MtrunA17_Chr4g0005491 | 35.550 | 391 | 222 | 11 | 10 | 378 | 25 | 407 | 5.40e-82 | 256 |
| Msa1447100 | MtrunA17_Chr4g0071391 | 34.896 | 384 | 220 | 8 | 21 | 378 | 67 | 446 | 5.10e-81 | 255 |
| Msa1447100 | MtrunA17_Chr3g0085081 | 35.493 | 355 | 206 | 7 | 30 | 376 | 7 | 346 | 4.28e-80 | 249 |
| Msa1447100 | MtrunA17_Chr5g0437291 | 40.227 | 353 | 172 | 11 | 53 | 374 | 163 | 507 | 8.52e-80 | 253 |
| Msa1447100 | MtrunA17_Chr3g0091031 | 35.493 | 355 | 206 | 7 | 30 | 376 | 7 | 346 | 4.13e-79 | 246 |
| Msa1447100 | MtrunA17_Chr3g0114101 | 35.969 | 392 | 222 | 10 | 14 | 378 | 41 | 430 | 2.84e-78 | 247 |
| Msa1447100 | MtrunA17_Chr4g0068111 | 36.413 | 368 | 209 | 8 | 31 | 378 | 91 | 453 | 1.08e-77 | 246 |
| Msa1447100 | MtrunA17_Chr3g0085071 | 34.758 | 351 | 196 | 7 | 34 | 376 | 36 | 361 | 1.25e-76 | 241 |
| Msa1447100 | MtrunA17_Chr5g0437601 | 38.261 | 345 | 189 | 9 | 55 | 378 | 83 | 424 | 1.67e-76 | 242 |
| Msa1447100 | MtrunA17_Chr7g0243301 | 35.159 | 347 | 203 | 9 | 54 | 378 | 63 | 409 | 2.84e-74 | 236 |
| Msa1447100 | MtrunA17_Chr4g0005481 | 35.530 | 349 | 206 | 7 | 47 | 378 | 100 | 446 | 3.00e-73 | 234 |
| Msa1447100 | MtrunA17_Chr8g0368461 | 34.758 | 351 | 200 | 8 | 52 | 374 | 175 | 524 | 5.52e-73 | 236 |
| Msa1447100 | MtrunA17_Chr7g0259711 | 35.260 | 346 | 198 | 8 | 55 | 378 | 91 | 432 | 4.19e-67 | 219 |
| Msa1447100 | MtrunA17_Chr2g0287901 | 34.232 | 371 | 206 | 9 | 32 | 376 | 77 | 435 | 8.44e-67 | 218 |
| Msa1447100 | MtrunA17_Chr3g0126021 | 35.372 | 376 | 205 | 9 | 25 | 378 | 100 | 459 | 3.57e-63 | 209 |
| Msa1447100 | MtrunA17_Chr8g0384151 | 33.431 | 341 | 200 | 6 | 53 | 378 | 88 | 416 | 2.62e-61 | 203 |
| Msa1447100 | MtrunA17_Chr1g0209921 | 40.260 | 231 | 128 | 7 | 53 | 278 | 42 | 267 | 2.59e-57 | 188 |
| Msa1447100 | MtrunA17_Chr1g0178081 | 30.075 | 399 | 200 | 12 | 1 | 378 | 1 | 341 | 2.12e-51 | 175 |
| Msa1447100 | MtrunA17_Chr6g0476041 | 29.459 | 370 | 215 | 12 | 40 | 374 | 152 | 510 | 2.03e-44 | 160 |
| Msa1447100 | MtrunA17_Chr1g0188191 | 30.110 | 362 | 193 | 15 | 55 | 374 | 234 | 577 | 2.64e-40 | 150 |
| Msa1447100 | MtrunA17_Chr8g0347321 | 28.831 | 385 | 226 | 16 | 30 | 378 | 67 | 439 | 2.04e-38 | 142 |
| Msa1447100 | MtrunA17_Chr8g0384421 | 28.732 | 355 | 207 | 15 | 53 | 376 | 131 | 470 | 2.29e-36 | 137 |
| Msa1447100 | MtrunA17_Chr7g0226991 | 28.611 | 360 | 203 | 13 | 53 | 374 | 55 | 398 | 7.72e-36 | 135 |
| Msa1447100 | MtrunA17_Chr8g0387921 | 27.020 | 396 | 246 | 14 | 11 | 374 | 31 | 415 | 1.11e-34 | 132 |
| Msa1447100 | MtrunA17_Chr5g0414061 | 27.322 | 366 | 213 | 13 | 46 | 374 | 85 | 434 | 1.16e-34 | 132 |
| Msa1447100 | MtrunA17_Chr3g0140371 | 28.169 | 355 | 204 | 13 | 55 | 374 | 18 | 356 | 9.48e-34 | 129 |
| Msa1447100 | MtrunA17_Chr4g0049421 | 27.557 | 352 | 214 | 11 | 55 | 375 | 48 | 389 | 9.69e-34 | 129 |
| Msa1447100 | MtrunA17_Chr8g0391481 | 28.134 | 359 | 206 | 15 | 53 | 374 | 25 | 368 | 2.79e-33 | 127 |
| Msa1447100 | MtrunA17_Chr6g0451321 | 27.901 | 362 | 207 | 15 | 53 | 378 | 114 | 457 | 6.12e-33 | 128 |
| Msa1447100 | MtrunA17_Chr6g0456691 | 25.735 | 408 | 254 | 12 | 7 | 374 | 17 | 415 | 1.29e-32 | 127 |
| Msa1447100 | MtrunA17_Chr5g0414091 | 26.776 | 366 | 209 | 13 | 50 | 374 | 80 | 427 | 3.70e-32 | 125 |
| Msa1447100 | MtrunA17_Chr2g0283851 | 29.050 | 358 | 192 | 14 | 59 | 374 | 59 | 396 | 4.15e-32 | 125 |
| Msa1447100 | MtrunA17_Chr5g0414051 | 27.731 | 357 | 206 | 14 | 55 | 374 | 75 | 416 | 6.03e-31 | 122 |
| Msa1447100 | MtrunA17_Chr5g0414041 | 29.494 | 356 | 202 | 13 | 55 | 374 | 87 | 429 | 1.24e-30 | 121 |
| Msa1447100 | MtrunA17_Chr4g0070341 | 27.371 | 369 | 216 | 16 | 45 | 376 | 116 | 469 | 1.76e-30 | 121 |
| Msa1447100 | MtrunA17_Chr6g0456681 | 27.042 | 355 | 214 | 10 | 53 | 374 | 62 | 404 | 2.88e-29 | 117 |
| Msa1447100 | MtrunA17_Chr6g0455901 | 27.007 | 411 | 236 | 16 | 8 | 374 | 22 | 412 | 4.16e-26 | 108 |
| Msa1447100 | MtrunA17_Chr7g0221271 | 38.931 | 131 | 79 | 1 | 51 | 180 | 75 | 205 | 2.21e-24 | 99.4 |
| Msa1447100 | MtrunA17_Chr7g0221291 | 46.875 | 96 | 50 | 1 | 51 | 145 | 75 | 170 | 1.11e-23 | 96.7 |
| Msa1447100 | MtrunA17_Chr3g0085101 | 34.579 | 107 | 63 | 2 | 240 | 339 | 1 | 107 | 6.36e-17 | 76.3 |
| Msa1447100 | MtrunA17_Chr2g0287931 | 35.593 | 118 | 64 | 3 | 115 | 220 | 3 | 120 | 1.19e-15 | 72.8 |
| Msa1447100 | MtrunA17_Chr1g0209931 | 49.367 | 79 | 27 | 3 | 301 | 378 | 26 | 92 | 4.00e-14 | 67.8 |
| Msa1447100 | MtrunA17_Chr5g0429211 | 36.000 | 75 | 48 | 0 | 108 | 182 | 194 | 268 | 1.29e-11 | 64.7 |
| Msa1447100 | MtrunA17_Chr5g0429191 | 52.174 | 46 | 20 | 1 | 326 | 371 | 2 | 45 | 3.20e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1447100 | AT3G54260.1 | 61.741 | 379 | 131 | 6 | 2 | 376 | 4 | 372 | 3.96e-173 | 488 |
| Msa1447100 | AT5G58600.1 | 40.533 | 338 | 184 | 6 | 55 | 378 | 66 | 400 | 4.34e-93 | 285 |
| Msa1447100 | AT2G31110.2 | 38.736 | 364 | 197 | 7 | 21 | 374 | 11 | 358 | 3.13e-92 | 281 |
| Msa1447100 | AT1G29050.1 | 41.390 | 331 | 174 | 5 | 55 | 378 | 61 | 378 | 5.35e-92 | 281 |
| Msa1447100 | AT2G34070.1 | 40.118 | 339 | 180 | 7 | 49 | 378 | 59 | 383 | 6.18e-90 | 276 |
| Msa1447100 | AT2G30900.1 | 40.841 | 333 | 174 | 8 | 53 | 374 | 41 | 361 | 2.22e-89 | 274 |
| Msa1447100 | AT5G01360.2 | 38.329 | 347 | 191 | 8 | 53 | 378 | 34 | 378 | 6.47e-86 | 265 |
| Msa1447100 | AT3G62390.1 | 38.872 | 337 | 186 | 6 | 53 | 374 | 136 | 467 | 6.87e-86 | 268 |
| Msa1447100 | AT5G06700.1 | 38.251 | 366 | 201 | 7 | 37 | 378 | 230 | 594 | 1.72e-85 | 271 |
| Msa1447100 | AT5G01360.1 | 38.329 | 347 | 191 | 8 | 53 | 378 | 90 | 434 | 2.89e-85 | 266 |
| Msa1447100 | AT2G30010.1 | 39.769 | 347 | 180 | 8 | 55 | 378 | 56 | 396 | 9.93e-85 | 263 |
| Msa1447100 | AT2G30010.2 | 39.769 | 347 | 180 | 8 | 55 | 378 | 99 | 439 | 1.75e-84 | 264 |
| Msa1447100 | AT2G42570.1 | 38.507 | 335 | 180 | 7 | 54 | 378 | 46 | 364 | 1.25e-83 | 259 |
| Msa1447100 | AT1G73140.1 | 39.017 | 346 | 186 | 8 | 53 | 378 | 65 | 405 | 1.30e-83 | 261 |
| Msa1447100 | AT1G78710.1 | 38.298 | 329 | 182 | 7 | 54 | 374 | 37 | 352 | 2.57e-83 | 258 |
| Msa1447100 | AT3G12060.1 | 39.368 | 348 | 189 | 8 | 50 | 378 | 191 | 535 | 2.74e-83 | 264 |
| Msa1447100 | AT3G55990.1 | 37.669 | 369 | 200 | 9 | 28 | 374 | 119 | 479 | 9.68e-82 | 258 |
| Msa1447100 | AT2G40150.1 | 38.636 | 352 | 180 | 9 | 54 | 374 | 70 | 416 | 4.30e-81 | 254 |
| Msa1447100 | AT5G20590.1 | 38.663 | 344 | 190 | 8 | 53 | 378 | 139 | 479 | 6.96e-81 | 256 |
| Msa1447100 | AT5G49340.1 | 37.571 | 354 | 199 | 8 | 45 | 378 | 90 | 441 | 6.50e-80 | 253 |
| Msa1447100 | AT1G60790.1 | 36.705 | 346 | 198 | 9 | 49 | 374 | 184 | 528 | 9.26e-80 | 254 |
| Msa1447100 | AT3G14850.2 | 37.576 | 330 | 183 | 7 | 55 | 374 | 34 | 350 | 2.37e-79 | 248 |
| Msa1447100 | AT5G01620.2 | 37.391 | 345 | 194 | 8 | 53 | 378 | 108 | 449 | 3.31e-79 | 250 |
| Msa1447100 | AT5G01620.1 | 37.391 | 345 | 194 | 8 | 53 | 378 | 108 | 449 | 3.31e-79 | 250 |
| Msa1447100 | AT5G01620.3 | 37.391 | 345 | 194 | 8 | 53 | 378 | 116 | 457 | 4.63e-79 | 250 |
| Msa1447100 | AT2G40160.2 | 37.176 | 347 | 195 | 9 | 55 | 378 | 77 | 423 | 5.73e-78 | 247 |
| Msa1447100 | AT2G40160.1 | 36.888 | 347 | 196 | 9 | 55 | 378 | 77 | 423 | 6.76e-78 | 246 |
| Msa1447100 | AT3G11030.1 | 37.609 | 343 | 195 | 7 | 55 | 378 | 106 | 448 | 1.93e-76 | 243 |
| Msa1447100 | AT2G38320.1 | 32.412 | 398 | 242 | 10 | 3 | 378 | 12 | 404 | 4.48e-75 | 238 |
| Msa1447100 | AT2G40320.1 | 34.343 | 396 | 235 | 9 | 8 | 378 | 27 | 422 | 6.22e-74 | 236 |
| Msa1447100 | AT1G48880.1 | 35.057 | 348 | 181 | 8 | 54 | 378 | 114 | 439 | 3.82e-67 | 219 |
| Msa1447100 | AT5G19160.1 | 34.400 | 375 | 208 | 9 | 33 | 376 | 75 | 442 | 6.05e-67 | 219 |
| Msa1447100 | AT2G31110.3 | 38.583 | 254 | 153 | 3 | 20 | 272 | 10 | 261 | 1.76e-66 | 212 |
| Msa1447100 | AT3G06080.2 | 35.311 | 354 | 194 | 9 | 50 | 376 | 98 | 443 | 3.30e-65 | 214 |
| Msa1447100 | AT5G58600.2 | 41.410 | 227 | 130 | 3 | 55 | 279 | 66 | 291 | 3.69e-65 | 209 |
| Msa1447100 | AT2G38320.2 | 33.956 | 321 | 192 | 7 | 78 | 378 | 1 | 321 | 4.28e-65 | 210 |
| Msa1447100 | AT3G62390.2 | 41.176 | 238 | 129 | 3 | 53 | 279 | 136 | 373 | 4.43e-65 | 213 |
| Msa1447100 | AT2G30900.2 | 42.609 | 230 | 127 | 5 | 53 | 279 | 41 | 268 | 1.71e-64 | 207 |
| Msa1447100 | AT2G34070.2 | 39.163 | 263 | 138 | 6 | 124 | 378 | 1 | 249 | 1.21e-62 | 201 |
| Msa1447100 | AT5G06230.2 | 34.561 | 353 | 197 | 8 | 53 | 378 | 19 | 364 | 2.05e-62 | 204 |
| Msa1447100 | AT5G06230.1 | 34.561 | 353 | 197 | 8 | 53 | 378 | 60 | 405 | 3.95e-62 | 205 |
| Msa1447100 | AT3G11570.1 | 32.071 | 396 | 230 | 11 | 8 | 378 | 38 | 419 | 7.70e-61 | 202 |
| Msa1447100 | AT2G40160.3 | 39.407 | 236 | 132 | 6 | 55 | 279 | 77 | 312 | 1.21e-56 | 188 |
| Msa1447100 | AT1G78710.2 | 31.549 | 355 | 176 | 10 | 30 | 378 | 3 | 296 | 1.26e-55 | 185 |
| Msa1447100 | AT5G20590.2 | 38.750 | 240 | 134 | 5 | 53 | 279 | 139 | 378 | 7.34e-54 | 182 |
| Msa1447100 | AT5G19160.2 | 37.037 | 243 | 140 | 4 | 50 | 279 | 94 | 336 | 1.80e-50 | 173 |
| Msa1447100 | AT3G14850.1 | 35.385 | 260 | 146 | 6 | 124 | 374 | 1 | 247 | 3.50e-50 | 169 |
| Msa1447100 | AT2G31110.1 | 40.367 | 218 | 105 | 6 | 166 | 374 | 9 | 210 | 7.78e-49 | 164 |
| Msa1447100 | AT3G06080.1 | 35.802 | 243 | 143 | 4 | 50 | 279 | 98 | 340 | 1.21e-48 | 168 |
| Msa1447100 | AT5G06230.3 | 34.959 | 246 | 141 | 4 | 53 | 279 | 60 | 305 | 1.32e-45 | 159 |
| Msa1447100 | AT1G70230.1 | 30.447 | 358 | 190 | 14 | 55 | 378 | 79 | 411 | 1.79e-40 | 148 |
| Msa1447100 | AT4G25360.1 | 29.096 | 354 | 211 | 12 | 54 | 374 | 174 | 520 | 4.97e-39 | 146 |
| Msa1447100 | AT4G25360.2 | 29.096 | 354 | 211 | 12 | 54 | 374 | 174 | 520 | 4.97e-39 | 146 |
| Msa1447100 | AT5G51640.1 | 29.178 | 377 | 222 | 13 | 31 | 374 | 120 | 484 | 5.45e-39 | 145 |
| Msa1447100 | AT1G01430.1 | 26.216 | 370 | 237 | 12 | 35 | 374 | 80 | 443 | 4.17e-38 | 142 |
| Msa1447100 | AT4G01080.1 | 28.693 | 352 | 211 | 12 | 51 | 374 | 87 | 426 | 3.52e-37 | 139 |
| Msa1447100 | AT5G64020.1 | 27.324 | 355 | 220 | 15 | 55 | 376 | 57 | 406 | 1.17e-36 | 137 |
| Msa1447100 | AT5G20680.6 | 28.205 | 390 | 221 | 16 | 26 | 378 | 90 | 457 | 2.19e-34 | 132 |
| Msa1447100 | AT3G28150.1 | 28.713 | 404 | 215 | 18 | 12 | 376 | 39 | 408 | 2.95e-34 | 131 |
| Msa1447100 | AT5G20680.4 | 28.205 | 390 | 221 | 16 | 26 | 378 | 184 | 551 | 5.36e-34 | 132 |
| Msa1447100 | AT5G20680.1 | 28.205 | 390 | 221 | 16 | 26 | 378 | 184 | 551 | 5.36e-34 | 132 |
| Msa1447100 | AT5G20680.3 | 28.205 | 390 | 221 | 16 | 26 | 378 | 184 | 551 | 5.36e-34 | 132 |
| Msa1447100 | AT5G20680.5 | 28.205 | 390 | 221 | 16 | 26 | 378 | 184 | 551 | 5.36e-34 | 132 |
| Msa1447100 | AT5G20680.2 | 28.205 | 390 | 221 | 16 | 26 | 378 | 166 | 533 | 5.49e-34 | 132 |
| Msa1447100 | AT5G15890.1 | 27.841 | 352 | 214 | 10 | 49 | 374 | 181 | 518 | 1.65e-33 | 130 |
| Msa1447100 | AT2G37720.1 | 27.841 | 352 | 218 | 15 | 53 | 378 | 141 | 482 | 2.65e-33 | 129 |
| Msa1447100 | AT5G15900.1 | 31.378 | 392 | 202 | 16 | 26 | 378 | 46 | 409 | 2.81e-33 | 129 |
| Msa1447100 | AT5G15900.2 | 30.280 | 393 | 205 | 17 | 26 | 378 | 65 | 428 | 3.56e-33 | 129 |
| Msa1447100 | AT4G11090.1 | 28.019 | 414 | 245 | 18 | 1 | 374 | 21 | 421 | 6.62e-32 | 125 |
| Msa1447100 | AT5G64470.3 | 26.225 | 347 | 220 | 10 | 55 | 375 | 55 | 391 | 1.06e-31 | 124 |
| Msa1447100 | AT5G64470.2 | 26.062 | 353 | 219 | 11 | 55 | 375 | 55 | 397 | 6.79e-31 | 122 |
| Msa1447100 | AT2G14530.1 | 26.741 | 359 | 214 | 10 | 55 | 378 | 62 | 406 | 8.31e-31 | 122 |
| Msa1447100 | AT4G23790.1 | 27.424 | 361 | 209 | 14 | 53 | 374 | 77 | 423 | 2.78e-30 | 120 |
| Msa1447100 | AT3G02440.2 | 28.286 | 350 | 209 | 11 | 55 | 374 | 135 | 472 | 2.54e-29 | 119 |
| Msa1447100 | AT3G02440.1 | 28.286 | 350 | 209 | 11 | 55 | 374 | 127 | 464 | 2.75e-29 | 118 |
| Msa1447100 | AT5G64470.4 | 26.423 | 246 | 162 | 7 | 55 | 283 | 55 | 298 | 3.33e-21 | 93.6 |
| Msa1447100 | AT5G64470.1 | 26.423 | 246 | 162 | 7 | 55 | 283 | 55 | 298 | 3.56e-21 | 93.6 |
Find 97 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTGGTGTGCCTGATATT+TGG | 0.189016 | tig0031598:+2600 | Msa1447100:CDS |
| GTGATTTCTCAGTTGGAAAA+TGG | 0.208372 | tig0031598:+1180 | Msa1447100:CDS |
| AGACATCAATTGAGTTCTTC+TGG | 0.226253 | tig0031598:+1820 | Msa1447100:CDS |
| ATTTCTTCCATGAATCTCTT+TGG | 0.226552 | tig0031598:-1157 | None:intergenic |
| GCTCATTGGTGGACTCATTC+TGG | 0.278727 | tig0031598:+1960 | Msa1447100:CDS |
| TGATTAAATTGTAGGCAAAA+TGG | 0.281278 | tig0031598:+2335 | Msa1447100:intron |
| AAAGTGGGTGGATTTGAATT+TGG | 0.291594 | tig0031598:+2183 | Msa1447100:CDS |
| TTTCTTCCATGAATCTCTTT+GGG | 0.298282 | tig0031598:-1156 | None:intergenic |
| AGCATTTCGTTCCAAATATC+AGG | 0.327867 | tig0031598:-2611 | None:intergenic |
| TTCAGCCACATGCATGTTCC+AGG | 0.356693 | tig0031598:+2395 | Msa1447100:CDS |
| GTAATATCCTGTAGATATAC+TGG | 0.367331 | tig0031598:-2461 | None:intergenic |
| GGACCAGTAGTAGTGCTAAA+AGG | 0.371991 | tig0031598:+2416 | Msa1447100:CDS |
| TAATAAGAGAATTCTACATT+TGG | 0.381121 | tig0031598:+1878 | Msa1447100:CDS |
| TTGAAGAGAATGCAAGGTAT+TGG | 0.381566 | tig0031598:+1907 | Msa1447100:CDS |
| ATAGCATGGAAAGACATTAA+AGG | 0.392314 | tig0031598:-1712 | None:intergenic |
| TTCTTCCAATGCAAGCCAAC+TGG | 0.394214 | tig0031598:-1108 | None:intergenic |
| TGCAGCCATTGGTGCCTCCC+TGG | 0.399442 | tig0031598:+2584 | Msa1447100:CDS |
| TTTAATGTCTTTCCATGCTA+TGG | 0.404785 | tig0031598:+1714 | Msa1447100:CDS |
| TTGCATTTGATTCAGCTCAT+TGG | 0.406976 | tig0031598:+1946 | Msa1447100:CDS |
| TATTCCAACTGACAGGAAAA+AGG | 0.407152 | tig0031598:+1675 | Msa1447100:CDS |
| TTCTTCAGTTCTACCAATAG+TGG | 0.407885 | tig0031598:-1846 | None:intergenic |
| TGTATTGAGTCCTTTCTCAT+AGG | 0.414458 | tig0031598:-2155 | None:intergenic |
| GTTCTTCTGGGCACCACTAT+TGG | 0.416633 | tig0031598:+1833 | Msa1447100:CDS |
| CATTTGATTCAGCTCATTGG+TGG | 0.419213 | tig0031598:+1949 | Msa1447100:CDS |
| GACATCAATTGAGTTCTTCT+GGG | 0.424420 | tig0031598:+1821 | Msa1447100:CDS |
| AGCCAACTGGACACTTCCTC+TGG | 0.424797 | tig0031598:-1095 | None:intergenic |
| AAGAAATGTGATTTCTCAGT+TGG | 0.430768 | tig0031598:+1173 | Msa1447100:CDS |
| TTTGATGCACTGAAGTATCT+TGG | 0.440296 | tig0031598:+1565 | Msa1447100:CDS |
| AAATGGAAGTGGAAGCCATT+AGG | 0.444002 | tig0031598:+1302 | Msa1447100:CDS |
| AGACATTAAAGGACCATCAT+AGG | 0.444756 | tig0031598:-1701 | None:intergenic |
| CATTTCTCATAATCTGAATC+CGG | 0.445205 | tig0031598:-1284 | None:intergenic |
| CTTGGGATGGAACAACCTAA+TGG | 0.446475 | tig0031598:-1317 | None:intergenic |
| AGTCCTCTGATTGCAGCCAT+TGG | 0.458504 | tig0031598:+2573 | Msa1447100:CDS |
| CGGATTCAGATTATGAGAAA+TGG | 0.459664 | tig0031598:+1285 | Msa1447100:CDS |
| TTCTATAATGAGAAACCAAT+GGG | 0.459846 | tig0031598:+1624 | Msa1447100:CDS |
| GTATGGCACCTAGACATAAC+AGG | 0.470822 | tig0031598:+2236 | Msa1447100:CDS |
| AGTGTCCAGTTGGCTTGCAT+TGG | 0.472840 | tig0031598:+1103 | Msa1447100:CDS |
| TTCCAAATATCAGGCACACC+AGG | 0.474779 | tig0031598:-2602 | None:intergenic |
| TGCAAACCCAAAGAGATTCA+TGG | 0.480389 | tig0031598:+1150 | Msa1447100:CDS |
| TCTCTTGTATGCTTAGTTCA+AGG | 0.493508 | tig0031598:+1649 | Msa1447100:CDS |
| CATCACAAACATGAATCAAA+TGG | 0.494804 | tig0031598:+2129 | Msa1447100:CDS |
| CAAATGGTTGCCTATGAGAA+AGG | 0.503172 | tig0031598:+2145 | Msa1447100:CDS |
| GAGATTTCCAGTATATCTAC+AGG | 0.504762 | tig0031598:+2454 | Msa1447100:CDS |
| GCAGTAACTTGTCAAAAGAA+TGG | 0.505516 | tig0031598:+1257 | Msa1447100:CDS |
| GTTGGAAATGTTACAATCAA+AGG | 0.507595 | tig0031598:+2357 | Msa1447100:CDS |
| TAAATTGTAGGCAAAATGGT+TGG | 0.508760 | tig0031598:+2339 | Msa1447100:intron |
| ATGAGAAAGGACTCAATACA+TGG | 0.509591 | tig0031598:+2158 | Msa1447100:CDS |
| TTTAGCACTACTACTGGTCC+TGG | 0.509768 | tig0031598:-2413 | None:intergenic |
| TATTGGTAGAACTGAAGAAA+GGG | 0.514662 | tig0031598:+1850 | Msa1447100:CDS |
| AAGGAGTTATTCCAACTGAC+AGG | 0.516555 | tig0031598:+1668 | Msa1447100:CDS |
| TACCAGGTGGGATTATTACA+TGG | 0.524110 | tig0031598:+2093 | Msa1447100:intron |
| GCACACCAGGGAGGCACCAA+TGG | 0.532334 | tig0031598:-2589 | None:intergenic |
| CATCGTGTATGTGGATAAGA+AGG | 0.533976 | tig0031598:-2805 | None:intergenic |
| GTTACTGCAGTGGCGAGATA+AGG | 0.535012 | tig0031598:-1242 | None:intergenic |
| CAGATTATGAGAAATGGAAG+TGG | 0.537613 | tig0031598:+1291 | Msa1447100:CDS |
| CTATTGGTAGAACTGAAGAA+AGG | 0.537856 | tig0031598:+1849 | Msa1447100:CDS |
| ACATCCTTCAGTGTATAGTA+AGG | 0.542161 | tig0031598:+2511 | Msa1447100:CDS |
| AGCATACAAGAGATTCCCAT+TGG | 0.544133 | tig0031598:-1639 | None:intergenic |
| GACTCAATACATGGGCAAAG+TGG | 0.544827 | tig0031598:+2167 | Msa1447100:CDS |
| ATGACTGCATTTAGAAGAGA+TGG | 0.549263 | tig0031598:+2488 | Msa1447100:CDS |
| GAGAGGCAGAAACAAGGTAA+TGG | 0.549704 | tig0031598:+2548 | Msa1447100:CDS |
| ATTCTATAATGAGAAACCAA+TGG | 0.552968 | tig0031598:+1623 | Msa1447100:CDS |
| ATTAATATCCTACCATAGCA+TGG | 0.553143 | tig0031598:-1726 | None:intergenic |
| CATTAGGTTGTTCCATCCCA+AGG | 0.558505 | tig0031598:+1318 | Msa1447100:CDS |
| AGGTAATAAGTGAAGAAGAG+AGG | 0.559968 | tig0031598:+2531 | Msa1447100:CDS |
| GACAGTTGGAATCATAGAGA+GGG | 0.562013 | tig0031598:-1220 | None:intergenic |
| AGTACGTACCTGTTATGTCT+AGG | 0.567486 | tig0031598:-2244 | None:intergenic |
| GCACCAATGGCTGCAATCAG+AGG | 0.571338 | tig0031598:-2576 | None:intergenic |
| GTTTCATCATCACCTTGGGA+TGG | 0.572029 | tig0031598:-1330 | None:intergenic |
| TTGTCAAAAGAATGGACGGC+CGG | 0.574038 | tig0031598:+1265 | Msa1447100:CDS |
| GGAAAGAGAATGATGTTGGT+GGG | 0.575995 | tig0031598:+1598 | Msa1447100:CDS |
| ACTCAATACATGGGCAAAGT+GGG | 0.582566 | tig0031598:+2168 | Msa1447100:CDS |
| GAGAGGAAAGAGAATGATGT+TGG | 0.587409 | tig0031598:+1594 | Msa1447100:CDS |
| AATGGCTGCAATCAGAGGAC+TGG | 0.587580 | tig0031598:-2571 | None:intergenic |
| GAGAATGCAAGGTATTGGAA+AGG | 0.589108 | tig0031598:+1912 | Msa1447100:CDS |
| ATGTGGATAAGAAGGAAGGA+AGG | 0.592817 | tig0031598:-2797 | None:intergenic |
| ATCCAGAGGAAGTGTCCAGT+TGG | 0.594248 | tig0031598:+1093 | Msa1447100:CDS |
| ATTTGATTGAAGAGAATGCA+AGG | 0.595081 | tig0031598:+1901 | Msa1447100:CDS |
| AAGTATCTTGGTAAAATGAG+AGG | 0.596417 | tig0031598:+1577 | Msa1447100:CDS |
| GTGTATGTGGATAAGAAGGA+AGG | 0.597039 | tig0031598:-2801 | None:intergenic |
| AGGTGGGATTATTACATGGA+AGG | 0.598017 | tig0031598:+2097 | Msa1447100:intron |
| CAATACATGGGCAAAGTGGG+TGG | 0.598037 | tig0031598:+2171 | Msa1447100:CDS |
| ATTACCTTACTATACACTGA+AGG | 0.598619 | tig0031598:-2515 | None:intergenic |
| GTTGGAATCATAGAGAGGGT+AGG | 0.612157 | tig0031598:-1216 | None:intergenic |
| TAACTTGTCAAAAGAATGGA+CGG | 0.614689 | tig0031598:+1261 | Msa1447100:CDS |
| GGAACGAAATGCTGAGTGCA+TGG | 0.615044 | tig0031598:+2621 | Msa1447100:CDS |
| GGATTGTAAGATCAGTAAGT+CGG | 0.632612 | tig0031598:-2776 | None:intergenic |
| GAAGAAGAGAGGCAGAAACA+AGG | 0.633633 | tig0031598:+2542 | Msa1447100:CDS |
| GGACAGTTGGAATCATAGAG+AGG | 0.634353 | tig0031598:-1221 | None:intergenic |
| TCCAAATATCAGGCACACCA+GGG | 0.635948 | tig0031598:-2601 | None:intergenic |
| AGTGGCGAGATAAGGACAGT+TGG | 0.638580 | tig0031598:-1234 | None:intergenic |
| AGGAAAGAGAATGATGTTGG+TGG | 0.644337 | tig0031598:+1597 | Msa1447100:CDS |
| AGAAACTGAAGACGTCAACA+TGG | 0.659763 | tig0031598:+1127 | Msa1447100:CDS |
| TGAGAAAGGACTCAATACAT+GGG | 0.677756 | tig0031598:+2159 | Msa1447100:CDS |
| CTGGTCCTGGAACATGCATG+TGG | 0.678164 | tig0031598:-2400 | None:intergenic |
| ATTATCACTGATCAATCCAG+AGG | 0.696073 | tig0031598:+1079 | Msa1447100:CDS |
| AAATATCAGGCACACCAGGG+AGG | 0.749580 | tig0031598:-2598 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAATAAAATATTGATGA+AGG | - | tig0031598:2284-2303 | None:intergenic | 15.0% |
| !! | TTTAACTATAACTAAAAAGA+TGG | + | tig0031598:2645-2664 | Msa1447100:exon | 15.0% |
| !! | CAAAAATAAAATATTGATGA+AGG | - | tig0031598:2284-2303 | None:intergenic | 15.0% |
| !! | TTTAACTATAACTAAAAAGA+TGG | + | tig0031598:2645-2664 | Msa1447100:exon | 15.0% |
| !! | ATAAAAATGACAGTAAATGA+AGG | - | tig0031598:1034-1053 | None:intergenic | 20.0% |
| !!! | CATTTTTAGAAGGAAAATTA+AGG | - | tig0031598:1763-1782 | None:intergenic | 20.0% |
| !!! | GTAAGTAAATCATTTTTAGA+AGG | - | tig0031598:1773-1792 | None:intergenic | 20.0% |
| !! | TAATAAGAGAATTCTACATT+TGG | + | tig0031598:1878-1897 | Msa1447100:CDS | 20.0% |
| !!! | TAATCATTTTTACATCCTAA+TGG | + | tig0031598:2054-2073 | Msa1447100:intron | 20.0% |
| !! | AGAACATTTGATTAAATTGT+AGG | + | tig0031598:2327-2346 | Msa1447100:intron | 20.0% |
| !! | ATAAAAATGACAGTAAATGA+AGG | - | tig0031598:1034-1053 | None:intergenic | 20.0% |
| !!! | CATTTTTAGAAGGAAAATTA+AGG | - | tig0031598:1763-1782 | None:intergenic | 20.0% |
| !!! | GTAAGTAAATCATTTTTAGA+AGG | - | tig0031598:1773-1792 | None:intergenic | 20.0% |
| !! | TAATAAGAGAATTCTACATT+TGG | + | tig0031598:1878-1897 | Msa1447100:CDS | 20.0% |
| !!! | TAATCATTTTTACATCCTAA+TGG | + | tig0031598:2054-2073 | Msa1447100:intron | 20.0% |
| !! | AGAACATTTGATTAAATTGT+AGG | + | tig0031598:2327-2346 | Msa1447100:intron | 20.0% |
| !!! | CTGTCATTTTTATTCTTCTT+AGG | + | tig0031598:1041-1060 | Msa1447100:CDS | 25.0% |
| ! | AAGCATGTAAGAAAACAAAA+AGG | - | tig0031598:1380-1399 | None:intergenic | 25.0% |
| ! | ATTCTATAATGAGAAACCAA+TGG | + | tig0031598:1623-1642 | Msa1447100:CDS | 25.0% |
| ! | TTCTATAATGAGAAACCAAT+GGG | + | tig0031598:1624-1643 | Msa1447100:CDS | 25.0% |
| !! | TAATCAAGATTGATTCCATT+AGG | - | tig0031598:2072-2091 | None:intergenic | 25.0% |
| ! | AATCAATCTTGATTAATACC+AGG | + | tig0031598:2077-2096 | Msa1447100:intron | 25.0% |
| ! | TGATTAAATTGTAGGCAAAA+TGG | + | tig0031598:2335-2354 | Msa1447100:intron | 25.0% |
| ! | CTATAACTAAAAAGATGGAA+TGG | + | tig0031598:2650-2669 | Msa1447100:three_prime_UTR | 25.0% |
| !!! | CTGTCATTTTTATTCTTCTT+AGG | + | tig0031598:1041-1060 | Msa1447100:CDS | 25.0% |
| ! | AAGCATGTAAGAAAACAAAA+AGG | - | tig0031598:1380-1399 | None:intergenic | 25.0% |
| ! | ATTCTATAATGAGAAACCAA+TGG | + | tig0031598:1623-1642 | Msa1447100:CDS | 25.0% |
| ! | TTCTATAATGAGAAACCAAT+GGG | + | tig0031598:1624-1643 | Msa1447100:CDS | 25.0% |
| !! | TAATCAAGATTGATTCCATT+AGG | - | tig0031598:2072-2091 | None:intergenic | 25.0% |
| ! | AATCAATCTTGATTAATACC+AGG | + | tig0031598:2077-2096 | Msa1447100:intron | 25.0% |
| ! | TGATTAAATTGTAGGCAAAA+TGG | + | tig0031598:2335-2354 | Msa1447100:intron | 25.0% |
| ! | CTATAACTAAAAAGATGGAA+TGG | + | tig0031598:2650-2669 | Msa1447100:three_prime_UTR | 25.0% |
| TTTCTTCCATGAATCTCTTT+GGG | - | tig0031598:1159-1178 | None:intergenic | 30.0% | |
| ATTTCTTCCATGAATCTCTT+TGG | - | tig0031598:1160-1179 | None:intergenic | 30.0% | |
| AAGAAATGTGATTTCTCAGT+TGG | + | tig0031598:1173-1192 | Msa1447100:CDS | 30.0% | |
| ! | TAACTTGTCAAAAGAATGGA+CGG | + | tig0031598:1261-1280 | Msa1447100:CDS | 30.0% |
| CATTTCTCATAATCTGAATC+CGG | - | tig0031598:1287-1306 | None:intergenic | 30.0% | |
| TAATGTTTCATCATCACCTT+GGG | - | tig0031598:1337-1356 | None:intergenic | 30.0% | |
| TTAATGTTTCATCATCACCT+TGG | - | tig0031598:1338-1357 | None:intergenic | 30.0% | |
| ! | TGCAACATTTTTGACATGTA+TGG | + | tig0031598:1404-1423 | Msa1447100:intron | 30.0% |
| AGAAGCTAAATTTATCAGCA+TGG | - | tig0031598:1529-1548 | None:intergenic | 30.0% | |
| AAGTATCTTGGTAAAATGAG+AGG | + | tig0031598:1577-1596 | Msa1447100:CDS | 30.0% | |
| ATAGCATGGAAAGACATTAA+AGG | - | tig0031598:1715-1734 | None:intergenic | 30.0% | |
| TTTAATGTCTTTCCATGCTA+TGG | + | tig0031598:1714-1733 | Msa1447100:CDS | 30.0% | |
| ATTAATATCCTACCATAGCA+TGG | - | tig0031598:1729-1748 | None:intergenic | 30.0% | |
| ACATGTTGTTCACTTATTAC+AGG | + | tig0031598:1791-1810 | Msa1447100:intron | 30.0% | |
| TATTGGTAGAACTGAAGAAA+GGG | + | tig0031598:1850-1869 | Msa1447100:CDS | 30.0% | |
| ATTTGATTGAAGAGAATGCA+AGG | + | tig0031598:1901-1920 | Msa1447100:CDS | 30.0% | |
| AATCTTGATTAATACCAGGT+GGG | + | tig0031598:2081-2100 | Msa1447100:intron | 30.0% | |
| CATCACAAACATGAATCAAA+TGG | + | tig0031598:2129-2148 | Msa1447100:CDS | 30.0% | |
| TAAATTGTAGGCAAAATGGT+TGG | + | tig0031598:2339-2358 | Msa1447100:intron | 30.0% | |
| GTTGGAAATGTTACAATCAA+AGG | + | tig0031598:2357-2376 | Msa1447100:CDS | 30.0% | |
| ! | ATGTGGCTGAAATATTTTAC+AGG | - | tig0031598:2386-2405 | None:intergenic | 30.0% |
| GTAATATCCTGTAGATATAC+TGG | - | tig0031598:2464-2483 | None:intergenic | 30.0% | |
| ATTACCTTACTATACACTGA+AGG | - | tig0031598:2518-2537 | None:intergenic | 30.0% | |
| !!! | GAATGGATCTGAGTTTTTTA+TGG | + | tig0031598:2667-2686 | Msa1447100:three_prime_UTR | 30.0% |
| TTTCTTCCATGAATCTCTTT+GGG | - | tig0031598:1159-1178 | None:intergenic | 30.0% | |
| ATTTCTTCCATGAATCTCTT+TGG | - | tig0031598:1160-1179 | None:intergenic | 30.0% | |
| AAGAAATGTGATTTCTCAGT+TGG | + | tig0031598:1173-1192 | Msa1447100:CDS | 30.0% | |
| ! | TAACTTGTCAAAAGAATGGA+CGG | + | tig0031598:1261-1280 | Msa1447100:CDS | 30.0% |
| CATTTCTCATAATCTGAATC+CGG | - | tig0031598:1287-1306 | None:intergenic | 30.0% | |
| TAATGTTTCATCATCACCTT+GGG | - | tig0031598:1337-1356 | None:intergenic | 30.0% | |
| TTAATGTTTCATCATCACCT+TGG | - | tig0031598:1338-1357 | None:intergenic | 30.0% | |
| ! | TGCAACATTTTTGACATGTA+TGG | + | tig0031598:1404-1423 | Msa1447100:intron | 30.0% |
| AGAAGCTAAATTTATCAGCA+TGG | - | tig0031598:1529-1548 | None:intergenic | 30.0% | |
| AAGTATCTTGGTAAAATGAG+AGG | + | tig0031598:1577-1596 | Msa1447100:CDS | 30.0% | |
| ATAGCATGGAAAGACATTAA+AGG | - | tig0031598:1715-1734 | None:intergenic | 30.0% | |
| TTTAATGTCTTTCCATGCTA+TGG | + | tig0031598:1714-1733 | Msa1447100:CDS | 30.0% | |
| ATTAATATCCTACCATAGCA+TGG | - | tig0031598:1729-1748 | None:intergenic | 30.0% | |
| ACATGTTGTTCACTTATTAC+AGG | + | tig0031598:1791-1810 | Msa1447100:intron | 30.0% | |
| TATTGGTAGAACTGAAGAAA+GGG | + | tig0031598:1850-1869 | Msa1447100:CDS | 30.0% | |
| ATTTGATTGAAGAGAATGCA+AGG | + | tig0031598:1901-1920 | Msa1447100:CDS | 30.0% | |
| AATCTTGATTAATACCAGGT+GGG | + | tig0031598:2081-2100 | Msa1447100:intron | 30.0% | |
| CATCACAAACATGAATCAAA+TGG | + | tig0031598:2129-2148 | Msa1447100:CDS | 30.0% | |
| TAAATTGTAGGCAAAATGGT+TGG | + | tig0031598:2339-2358 | Msa1447100:intron | 30.0% | |
| GTTGGAAATGTTACAATCAA+AGG | + | tig0031598:2357-2376 | Msa1447100:CDS | 30.0% | |
| ! | ATGTGGCTGAAATATTTTAC+AGG | - | tig0031598:2386-2405 | None:intergenic | 30.0% |
| GTAATATCCTGTAGATATAC+TGG | - | tig0031598:2464-2483 | None:intergenic | 30.0% | |
| ATTACCTTACTATACACTGA+AGG | - | tig0031598:2518-2537 | None:intergenic | 30.0% | |
| !!! | GAATGGATCTGAGTTTTTTA+TGG | + | tig0031598:2667-2686 | Msa1447100:three_prime_UTR | 30.0% |
| ATTATCACTGATCAATCCAG+AGG | + | tig0031598:1079-1098 | Msa1447100:CDS | 35.0% | |
| GTGATTTCTCAGTTGGAAAA+TGG | + | tig0031598:1180-1199 | Msa1447100:CDS | 35.0% | |
| ! | GCAGTAACTTGTCAAAAGAA+TGG | + | tig0031598:1257-1276 | Msa1447100:CDS | 35.0% |
| CGGATTCAGATTATGAGAAA+TGG | + | tig0031598:1285-1304 | Msa1447100:CDS | 35.0% | |
| CAGATTATGAGAAATGGAAG+TGG | + | tig0031598:1291-1310 | Msa1447100:CDS | 35.0% | |
| ! | TTTGATGCACTGAAGTATCT+TGG | + | tig0031598:1565-1584 | Msa1447100:CDS | 35.0% |
| TCTCTTGTATGCTTAGTTCA+AGG | + | tig0031598:1649-1668 | Msa1447100:CDS | 35.0% | |
| TATTCCAACTGACAGGAAAA+AGG | + | tig0031598:1675-1694 | Msa1447100:CDS | 35.0% | |
| AGACATTAAAGGACCATCAT+AGG | - | tig0031598:1704-1723 | None:intergenic | 35.0% | |
| AGACATCAATTGAGTTCTTC+TGG | + | tig0031598:1820-1839 | Msa1447100:CDS | 35.0% | |
| GACATCAATTGAGTTCTTCT+GGG | + | tig0031598:1821-1840 | Msa1447100:CDS | 35.0% | |
| TTCTTCAGTTCTACCAATAG+TGG | - | tig0031598:1849-1868 | None:intergenic | 35.0% | |
| CTATTGGTAGAACTGAAGAA+AGG | + | tig0031598:1849-1868 | Msa1447100:CDS | 35.0% | |
| TTGAAGAGAATGCAAGGTAT+TGG | + | tig0031598:1907-1926 | Msa1447100:CDS | 35.0% | |
| TTGCATTTGATTCAGCTCAT+TGG | + | tig0031598:1946-1965 | Msa1447100:CDS | 35.0% | |
| CAATCTTGATTAATACCAGG+TGG | + | tig0031598:2080-2099 | Msa1447100:intron | 35.0% | |
| TGTATTGAGTCCTTTCTCAT+AGG | - | tig0031598:2158-2177 | None:intergenic | 35.0% | |
| ATGAGAAAGGACTCAATACA+TGG | + | tig0031598:2158-2177 | Msa1447100:CDS | 35.0% | |
| TGAGAAAGGACTCAATACAT+GGG | + | tig0031598:2159-2178 | Msa1447100:CDS | 35.0% | |
| ! | AAAGTGGGTGGATTTGAATT+TGG | + | tig0031598:2183-2202 | Msa1447100:CDS | 35.0% |
| ! | CATACTTCTAAAAACGACTC+GGG | - | tig0031598:2221-2240 | None:intergenic | 35.0% |
| ! | CCATACTTCTAAAAACGACT+CGG | - | tig0031598:2222-2241 | None:intergenic | 35.0% |
| GAGATTTCCAGTATATCTAC+AGG | + | tig0031598:2454-2473 | Msa1447100:CDS | 35.0% | |
| ATGACTGCATTTAGAAGAGA+TGG | + | tig0031598:2488-2507 | Msa1447100:CDS | 35.0% | |
| ACATCCTTCAGTGTATAGTA+AGG | + | tig0031598:2511-2530 | Msa1447100:CDS | 35.0% | |
| AGGTAATAAGTGAAGAAGAG+AGG | + | tig0031598:2531-2550 | Msa1447100:CDS | 35.0% | |
| AGCATTTCGTTCCAAATATC+AGG | - | tig0031598:2614-2633 | None:intergenic | 35.0% | |
| GGATTGTAAGATCAGTAAGT+CGG | - | tig0031598:2779-2798 | None:intergenic | 35.0% | |
| ATTATCACTGATCAATCCAG+AGG | + | tig0031598:1079-1098 | Msa1447100:CDS | 35.0% | |
| GTGATTTCTCAGTTGGAAAA+TGG | + | tig0031598:1180-1199 | Msa1447100:CDS | 35.0% | |
| ! | GCAGTAACTTGTCAAAAGAA+TGG | + | tig0031598:1257-1276 | Msa1447100:CDS | 35.0% |
| CGGATTCAGATTATGAGAAA+TGG | + | tig0031598:1285-1304 | Msa1447100:CDS | 35.0% | |
| CAGATTATGAGAAATGGAAG+TGG | + | tig0031598:1291-1310 | Msa1447100:CDS | 35.0% | |
| ! | TTTGATGCACTGAAGTATCT+TGG | + | tig0031598:1565-1584 | Msa1447100:CDS | 35.0% |
| TCTCTTGTATGCTTAGTTCA+AGG | + | tig0031598:1649-1668 | Msa1447100:CDS | 35.0% | |
| TATTCCAACTGACAGGAAAA+AGG | + | tig0031598:1675-1694 | Msa1447100:CDS | 35.0% | |
| AGACATTAAAGGACCATCAT+AGG | - | tig0031598:1704-1723 | None:intergenic | 35.0% | |
| AGACATCAATTGAGTTCTTC+TGG | + | tig0031598:1820-1839 | Msa1447100:CDS | 35.0% | |
| GACATCAATTGAGTTCTTCT+GGG | + | tig0031598:1821-1840 | Msa1447100:CDS | 35.0% | |
| TTCTTCAGTTCTACCAATAG+TGG | - | tig0031598:1849-1868 | None:intergenic | 35.0% | |
| CTATTGGTAGAACTGAAGAA+AGG | + | tig0031598:1849-1868 | Msa1447100:CDS | 35.0% | |
| TTGAAGAGAATGCAAGGTAT+TGG | + | tig0031598:1907-1926 | Msa1447100:CDS | 35.0% | |
| TTGCATTTGATTCAGCTCAT+TGG | + | tig0031598:1946-1965 | Msa1447100:CDS | 35.0% | |
| CAATCTTGATTAATACCAGG+TGG | + | tig0031598:2080-2099 | Msa1447100:intron | 35.0% | |
| TGTATTGAGTCCTTTCTCAT+AGG | - | tig0031598:2158-2177 | None:intergenic | 35.0% | |
| ATGAGAAAGGACTCAATACA+TGG | + | tig0031598:2158-2177 | Msa1447100:CDS | 35.0% | |
| TGAGAAAGGACTCAATACAT+GGG | + | tig0031598:2159-2178 | Msa1447100:CDS | 35.0% | |
| ! | AAAGTGGGTGGATTTGAATT+TGG | + | tig0031598:2183-2202 | Msa1447100:CDS | 35.0% |
| ! | CATACTTCTAAAAACGACTC+GGG | - | tig0031598:2221-2240 | None:intergenic | 35.0% |
| ! | CCATACTTCTAAAAACGACT+CGG | - | tig0031598:2222-2241 | None:intergenic | 35.0% |
| GAGATTTCCAGTATATCTAC+AGG | + | tig0031598:2454-2473 | Msa1447100:CDS | 35.0% | |
| ATGACTGCATTTAGAAGAGA+TGG | + | tig0031598:2488-2507 | Msa1447100:CDS | 35.0% | |
| ACATCCTTCAGTGTATAGTA+AGG | + | tig0031598:2511-2530 | Msa1447100:CDS | 35.0% | |
| AGGTAATAAGTGAAGAAGAG+AGG | + | tig0031598:2531-2550 | Msa1447100:CDS | 35.0% | |
| AGCATTTCGTTCCAAATATC+AGG | - | tig0031598:2614-2633 | None:intergenic | 35.0% | |
| GGATTGTAAGATCAGTAAGT+CGG | - | tig0031598:2779-2798 | None:intergenic | 35.0% | |
| AGAAACTGAAGACGTCAACA+TGG | + | tig0031598:1127-1146 | Msa1447100:CDS | 40.0% | |
| TGCAAACCCAAAGAGATTCA+TGG | + | tig0031598:1150-1169 | Msa1447100:CDS | 40.0% | |
| GACAGTTGGAATCATAGAGA+GGG | - | tig0031598:1223-1242 | None:intergenic | 40.0% | |
| ! | CTTTTGACAAGTTACTGCAG+TGG | - | tig0031598:1255-1274 | None:intergenic | 40.0% |
| AAATGGAAGTGGAAGCCATT+AGG | + | tig0031598:1302-1321 | Msa1447100:CDS | 40.0% | |
| AGCATGGTTTACGTGTGTTT+GGG | - | tig0031598:1513-1532 | None:intergenic | 40.0% | |
| ! | AGCTTCTCGATGACATTTTC+AGG | + | tig0031598:1542-1561 | Msa1447100:intron | 40.0% |
| GAGAGGAAAGAGAATGATGT+TGG | + | tig0031598:1594-1613 | Msa1447100:CDS | 40.0% | |
| AGGAAAGAGAATGATGTTGG+TGG | + | tig0031598:1597-1616 | Msa1447100:CDS | 40.0% | |
| GGAAAGAGAATGATGTTGGT+GGG | + | tig0031598:1598-1617 | Msa1447100:CDS | 40.0% | |
| AGCATACAAGAGATTCCCAT+TGG | - | tig0031598:1642-1661 | None:intergenic | 40.0% | |
| AAGGAGTTATTCCAACTGAC+AGG | + | tig0031598:1668-1687 | Msa1447100:CDS | 40.0% | |
| AGGAAAAAGGTCACCTATGA+TGG | + | tig0031598:1688-1707 | Msa1447100:CDS | 40.0% | |
| ATGTCTTTCCATGCTATGGT+AGG | + | tig0031598:1718-1737 | Msa1447100:intron | 40.0% | |
| !! | GAGAATGCAAGGTATTGGAA+AGG | + | tig0031598:1912-1931 | Msa1447100:CDS | 40.0% |
| CATTTGATTCAGCTCATTGG+TGG | + | tig0031598:1949-1968 | Msa1447100:CDS | 40.0% | |
| TACCAGGTGGGATTATTACA+TGG | + | tig0031598:2093-2112 | Msa1447100:intron | 40.0% | |
| TTCCATGTAATAATCCCACC+TGG | - | tig0031598:2098-2117 | None:intergenic | 40.0% | |
| AGGTGGGATTATTACATGGA+AGG | + | tig0031598:2097-2116 | Msa1447100:intron | 40.0% | |
| CAAATGGTTGCCTATGAGAA+AGG | + | tig0031598:2145-2164 | Msa1447100:CDS | 40.0% | |
| ACTCAATACATGGGCAAAGT+GGG | + | tig0031598:2168-2187 | Msa1447100:CDS | 40.0% | |
| !!! | CCGAGTCGTTTTTAGAAGTA+TGG | + | tig0031598:2219-2238 | Msa1447100:CDS | 40.0% |
| AGTACGTACCTGTTATGTCT+AGG | - | tig0031598:2247-2266 | None:intergenic | 40.0% | |
| ! | ACTCCTTTTAGCACTACTAC+TGG | - | tig0031598:2422-2441 | None:intergenic | 40.0% |
| AGAAACTGAAGACGTCAACA+TGG | + | tig0031598:1127-1146 | Msa1447100:CDS | 40.0% | |
| TGCAAACCCAAAGAGATTCA+TGG | + | tig0031598:1150-1169 | Msa1447100:CDS | 40.0% | |
| GACAGTTGGAATCATAGAGA+GGG | - | tig0031598:1223-1242 | None:intergenic | 40.0% | |
| ! | CTTTTGACAAGTTACTGCAG+TGG | - | tig0031598:1255-1274 | None:intergenic | 40.0% |
| AAATGGAAGTGGAAGCCATT+AGG | + | tig0031598:1302-1321 | Msa1447100:CDS | 40.0% | |
| AGCATGGTTTACGTGTGTTT+GGG | - | tig0031598:1513-1532 | None:intergenic | 40.0% | |
| ! | AGCTTCTCGATGACATTTTC+AGG | + | tig0031598:1542-1561 | Msa1447100:intron | 40.0% |
| GAGAGGAAAGAGAATGATGT+TGG | + | tig0031598:1594-1613 | Msa1447100:CDS | 40.0% | |
| AGGAAAGAGAATGATGTTGG+TGG | + | tig0031598:1597-1616 | Msa1447100:CDS | 40.0% | |
| GGAAAGAGAATGATGTTGGT+GGG | + | tig0031598:1598-1617 | Msa1447100:CDS | 40.0% | |
| AGCATACAAGAGATTCCCAT+TGG | - | tig0031598:1642-1661 | None:intergenic | 40.0% | |
| AAGGAGTTATTCCAACTGAC+AGG | + | tig0031598:1668-1687 | Msa1447100:CDS | 40.0% | |
| AGGAAAAAGGTCACCTATGA+TGG | + | tig0031598:1688-1707 | Msa1447100:CDS | 40.0% | |
| ATGTCTTTCCATGCTATGGT+AGG | + | tig0031598:1718-1737 | Msa1447100:intron | 40.0% | |
| !! | GAGAATGCAAGGTATTGGAA+AGG | + | tig0031598:1912-1931 | Msa1447100:CDS | 40.0% |
| CATTTGATTCAGCTCATTGG+TGG | + | tig0031598:1949-1968 | Msa1447100:CDS | 40.0% | |
| TACCAGGTGGGATTATTACA+TGG | + | tig0031598:2093-2112 | Msa1447100:intron | 40.0% | |
| TTCCATGTAATAATCCCACC+TGG | - | tig0031598:2098-2117 | None:intergenic | 40.0% | |
| AGGTGGGATTATTACATGGA+AGG | + | tig0031598:2097-2116 | Msa1447100:intron | 40.0% | |
| CAAATGGTTGCCTATGAGAA+AGG | + | tig0031598:2145-2164 | Msa1447100:CDS | 40.0% | |
| ACTCAATACATGGGCAAAGT+GGG | + | tig0031598:2168-2187 | Msa1447100:CDS | 40.0% | |
| !!! | CCGAGTCGTTTTTAGAAGTA+TGG | + | tig0031598:2219-2238 | Msa1447100:CDS | 40.0% |
| AGTACGTACCTGTTATGTCT+AGG | - | tig0031598:2247-2266 | None:intergenic | 40.0% | |
| ! | ACTCCTTTTAGCACTACTAC+TGG | - | tig0031598:2422-2441 | None:intergenic | 40.0% |
| TTCTTCCAATGCAAGCCAAC+TGG | - | tig0031598:1111-1130 | None:intergenic | 45.0% | |
| GTTGGAATCATAGAGAGGGT+AGG | - | tig0031598:1219-1238 | None:intergenic | 45.0% | |
| GGACAGTTGGAATCATAGAG+AGG | - | tig0031598:1224-1243 | None:intergenic | 45.0% | |
| TTGTCAAAAGAATGGACGGC+CGG | + | tig0031598:1265-1284 | Msa1447100:CDS | 45.0% | |
| CTTGGGATGGAACAACCTAA+TGG | - | tig0031598:1320-1339 | None:intergenic | 45.0% | |
| ! | CATTAGGTTGTTCCATCCCA+AGG | + | tig0031598:1318-1337 | Msa1447100:CDS | 45.0% |
| GTTTCATCATCACCTTGGGA+TGG | - | tig0031598:1333-1352 | None:intergenic | 45.0% | |
| CAGCATGGTTTACGTGTGTT+TGG | - | tig0031598:1514-1533 | None:intergenic | 45.0% | |
| ! | GTGACCTTTTTCCTGTCAGT+TGG | - | tig0031598:1682-1701 | None:intergenic | 45.0% |
| GACTCAATACATGGGCAAAG+TGG | + | tig0031598:2167-2186 | Msa1447100:CDS | 45.0% | |
| !! | AAAACGACTCGGGTTTTTCG+AGG | - | tig0031598:2211-2230 | None:intergenic | 45.0% |
| GTATGGCACCTAGACATAAC+AGG | + | tig0031598:2236-2255 | Msa1447100:CDS | 45.0% | |
| TTTAGCACTACTACTGGTCC+TGG | - | tig0031598:2416-2435 | None:intergenic | 45.0% | |
| GGACCAGTAGTAGTGCTAAA+AGG | + | tig0031598:2416-2435 | Msa1447100:CDS | 45.0% | |
| GAAGAAGAGAGGCAGAAACA+AGG | + | tig0031598:2542-2561 | Msa1447100:CDS | 45.0% | |
| GAGAGGCAGAAACAAGGTAA+TGG | + | tig0031598:2548-2567 | Msa1447100:CDS | 45.0% | |
| TCCAAATATCAGGCACACCA+GGG | - | tig0031598:2604-2623 | None:intergenic | 45.0% | |
| TTCCAAATATCAGGCACACC+AGG | - | tig0031598:2605-2624 | None:intergenic | 45.0% | |
| TTCTTCCAATGCAAGCCAAC+TGG | - | tig0031598:1111-1130 | None:intergenic | 45.0% | |
| GTTGGAATCATAGAGAGGGT+AGG | - | tig0031598:1219-1238 | None:intergenic | 45.0% | |
| GGACAGTTGGAATCATAGAG+AGG | - | tig0031598:1224-1243 | None:intergenic | 45.0% | |
| TTGTCAAAAGAATGGACGGC+CGG | + | tig0031598:1265-1284 | Msa1447100:CDS | 45.0% | |
| CTTGGGATGGAACAACCTAA+TGG | - | tig0031598:1320-1339 | None:intergenic | 45.0% | |
| ! | CATTAGGTTGTTCCATCCCA+AGG | + | tig0031598:1318-1337 | Msa1447100:CDS | 45.0% |
| GTTTCATCATCACCTTGGGA+TGG | - | tig0031598:1333-1352 | None:intergenic | 45.0% | |
| CAGCATGGTTTACGTGTGTT+TGG | - | tig0031598:1514-1533 | None:intergenic | 45.0% | |
| ! | GTGACCTTTTTCCTGTCAGT+TGG | - | tig0031598:1682-1701 | None:intergenic | 45.0% |
| GACTCAATACATGGGCAAAG+TGG | + | tig0031598:2167-2186 | Msa1447100:CDS | 45.0% | |
| !! | AAAACGACTCGGGTTTTTCG+AGG | - | tig0031598:2211-2230 | None:intergenic | 45.0% |
| GTATGGCACCTAGACATAAC+AGG | + | tig0031598:2236-2255 | Msa1447100:CDS | 45.0% | |
| TTTAGCACTACTACTGGTCC+TGG | - | tig0031598:2416-2435 | None:intergenic | 45.0% | |
| GGACCAGTAGTAGTGCTAAA+AGG | + | tig0031598:2416-2435 | Msa1447100:CDS | 45.0% | |
| GAAGAAGAGAGGCAGAAACA+AGG | + | tig0031598:2542-2561 | Msa1447100:CDS | 45.0% | |
| GAGAGGCAGAAACAAGGTAA+TGG | + | tig0031598:2548-2567 | Msa1447100:CDS | 45.0% | |
| TCCAAATATCAGGCACACCA+GGG | - | tig0031598:2604-2623 | None:intergenic | 45.0% | |
| TTCCAAATATCAGGCACACC+AGG | - | tig0031598:2605-2624 | None:intergenic | 45.0% | |
| !! | ATCCAGAGGAAGTGTCCAGT+TGG | + | tig0031598:1093-1112 | Msa1447100:CDS | 50.0% |
| !! | AGTGTCCAGTTGGCTTGCAT+TGG | + | tig0031598:1103-1122 | Msa1447100:CDS | 50.0% |
| AGTGGCGAGATAAGGACAGT+TGG | - | tig0031598:1237-1256 | None:intergenic | 50.0% | |
| GTTACTGCAGTGGCGAGATA+AGG | - | tig0031598:1245-1264 | None:intergenic | 50.0% | |
| GTTCTTCTGGGCACCACTAT+TGG | + | tig0031598:1833-1852 | Msa1447100:CDS | 50.0% | |
| !! | GCTCATTGGTGGACTCATTC+TGG | + | tig0031598:1960-1979 | Msa1447100:CDS | 50.0% |
| CAATACATGGGCAAAGTGGG+TGG | + | tig0031598:2171-2190 | Msa1447100:CDS | 50.0% | |
| TTCAGCCACATGCATGTTCC+AGG | + | tig0031598:2395-2414 | Msa1447100:CDS | 50.0% | |
| AATGGCTGCAATCAGAGGAC+TGG | - | tig0031598:2574-2593 | None:intergenic | 50.0% | |
| AGTCCTCTGATTGCAGCCAT+TGG | + | tig0031598:2573-2592 | Msa1447100:CDS | 50.0% | |
| AAATATCAGGCACACCAGGG+AGG | - | tig0031598:2601-2620 | None:intergenic | 50.0% | |
| TCCCTGGTGTGCCTGATATT+TGG | + | tig0031598:2600-2619 | Msa1447100:CDS | 50.0% | |
| GGAACGAAATGCTGAGTGCA+TGG | + | tig0031598:2621-2640 | Msa1447100:CDS | 50.0% | |
| !! | ATCCAGAGGAAGTGTCCAGT+TGG | + | tig0031598:1093-1112 | Msa1447100:CDS | 50.0% |
| !! | AGTGTCCAGTTGGCTTGCAT+TGG | + | tig0031598:1103-1122 | Msa1447100:CDS | 50.0% |
| AGTGGCGAGATAAGGACAGT+TGG | - | tig0031598:1237-1256 | None:intergenic | 50.0% | |
| GTTACTGCAGTGGCGAGATA+AGG | - | tig0031598:1245-1264 | None:intergenic | 50.0% | |
| GTTCTTCTGGGCACCACTAT+TGG | + | tig0031598:1833-1852 | Msa1447100:CDS | 50.0% | |
| !! | GCTCATTGGTGGACTCATTC+TGG | + | tig0031598:1960-1979 | Msa1447100:CDS | 50.0% |
| CAATACATGGGCAAAGTGGG+TGG | + | tig0031598:2171-2190 | Msa1447100:CDS | 50.0% | |
| TTCAGCCACATGCATGTTCC+AGG | + | tig0031598:2395-2414 | Msa1447100:CDS | 50.0% | |
| AATGGCTGCAATCAGAGGAC+TGG | - | tig0031598:2574-2593 | None:intergenic | 50.0% | |
| AGTCCTCTGATTGCAGCCAT+TGG | + | tig0031598:2573-2592 | Msa1447100:CDS | 50.0% | |
| AAATATCAGGCACACCAGGG+AGG | - | tig0031598:2601-2620 | None:intergenic | 50.0% | |
| TCCCTGGTGTGCCTGATATT+TGG | + | tig0031598:2600-2619 | Msa1447100:CDS | 50.0% | |
| GGAACGAAATGCTGAGTGCA+TGG | + | tig0031598:2621-2640 | Msa1447100:CDS | 50.0% | |
| AGCCAACTGGACACTTCCTC+TGG | - | tig0031598:1098-1117 | None:intergenic | 55.0% | |
| CTGGTCCTGGAACATGCATG+TGG | - | tig0031598:2403-2422 | None:intergenic | 55.0% | |
| GCACCAATGGCTGCAATCAG+AGG | - | tig0031598:2579-2598 | None:intergenic | 55.0% | |
| AGCCAACTGGACACTTCCTC+TGG | - | tig0031598:1098-1117 | None:intergenic | 55.0% | |
| CTGGTCCTGGAACATGCATG+TGG | - | tig0031598:2403-2422 | None:intergenic | 55.0% | |
| GCACCAATGGCTGCAATCAG+AGG | - | tig0031598:2579-2598 | None:intergenic | 55.0% | |
| ! | TGCAGCCATTGGTGCCTCCC+TGG | + | tig0031598:2584-2603 | Msa1447100:CDS | 65.0% |
| !! | GCACACCAGGGAGGCACCAA+TGG | - | tig0031598:2592-2611 | None:intergenic | 65.0% |
| ! | TGCAGCCATTGGTGCCTCCC+TGG | + | tig0031598:2584-2603 | Msa1447100:CDS | 65.0% |
| !! | GCACACCAGGGAGGCACCAA+TGG | - | tig0031598:2592-2611 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031598 | gene | 1017 | 2812 | 1017 | ID=Msa1447100;Name=Msa1447100 |
| tig0031598 | mRNA | 1017 | 2812 | 1017 | ID=Msa1447100-mRNA-1;Parent=Msa1447100;Name=Msa1447100-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|0.8|1|1|1|5|163|378 |
| tig0031598 | exon | 1017 | 1339 | 1017 | ID=Msa1447100-mRNA-1:exon:15741;Parent=Msa1447100-mRNA-1 |
| tig0031598 | exon | 1564 | 1735 | 1564 | ID=Msa1447100-mRNA-1:exon:15742;Parent=Msa1447100-mRNA-1 |
| tig0031598 | exon | 1813 | 1994 | 1813 | ID=Msa1447100-mRNA-1:exon:15743;Parent=Msa1447100-mRNA-1 |
| tig0031598 | exon | 2099 | 2257 | 2099 | ID=Msa1447100-mRNA-1:exon:15744;Parent=Msa1447100-mRNA-1 |
| tig0031598 | exon | 2349 | 2812 | 2349 | ID=Msa1447100-mRNA-1:exon:15745;Parent=Msa1447100-mRNA-1 |
| tig0031598 | CDS | 1017 | 1339 | 1017 | ID=Msa1447100-mRNA-1:cds;Parent=Msa1447100-mRNA-1 |
| tig0031598 | CDS | 1564 | 1735 | 1564 | ID=Msa1447100-mRNA-1:cds;Parent=Msa1447100-mRNA-1 |
| tig0031598 | CDS | 1813 | 1994 | 1813 | ID=Msa1447100-mRNA-1:cds;Parent=Msa1447100-mRNA-1 |
| tig0031598 | CDS | 2099 | 2257 | 2099 | ID=Msa1447100-mRNA-1:cds;Parent=Msa1447100-mRNA-1 |
| tig0031598 | CDS | 2349 | 2649 | 2349 | ID=Msa1447100-mRNA-1:cds;Parent=Msa1447100-mRNA-1 |
| tig0031598 | three_prime_UTR | 2650 | 2812 | 2650 | ID=Msa1447100-mRNA-1:three_prime_utr;Parent=Msa1447100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
