AlfalfaGEDB | Msa1322940

M. sativa cultivar zhongmu-4 / Msa1322940

KEGG: K14961
GO: GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0006325 GO:0006464 GO:0006479 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008213 GO:0009791 GO:0009987 GO:0010228 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0018022 GO:0018193 GO:0018205 GO:0019538 GO:0022414 GO:0031974 GO:0031981 GO:0032259 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034708 GO:0034968 GO:0035064 GO:0035097 GO:0036211 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043414 GO:0043627 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044665 GO:0044666 GO:0048188 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051276 GO:0051568 GO:0051716 GO:0061458 GO:0070013 GO:0071339 GO:0071704 GO:0071840 GO:0097159 GO:0140030 GO:0140034 GO:1901363 GO:1901564 GO:1902494 GO:1990234
PFAM: PF00400.35

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1322940	sp\|Q5E915\|RBBP_ARATH	65.750	400	132	3	1	400	136	530	2.18e-174	501

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1322940	G7L7T0	98.554	415	6	0	1	415	136	550	0.0	831

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0017510	Msa1322940	0.819197	1.318146e-52	-8.615850e-47
Msa0028420	Msa1322940	0.829869	4.042672e-55	-8.615850e-47
Msa0029270	Msa1322940	0.805539	1.271441e-49	-8.615850e-47
Msa0032430	Msa1322940	0.808757	2.646842e-50	-8.615850e-47
Msa0089630	Msa1322940	0.808036	3.771781e-50	-8.615850e-47
Msa0615710	Msa1322940	0.837784	4.237249e-57	-8.615850e-47
Msa0741240	Msa1322940	0.817135	3.857324e-52	-8.615850e-47
Msa0124060	Msa1322940	0.821767	3.388609e-53	-8.615850e-47
Msa0127050	Msa1322940	0.816310	5.908330e-52	-8.615850e-47
Msa0157290	Msa1322940	0.819482	1.134687e-52	-8.615850e-47
Msa0168500	Msa1322940	0.819401	1.184367e-52	-8.615850e-47
Msa0169310	Msa1322940	0.807075	6.032667e-50	-8.615850e-47
Msa0172070	Msa1322940	0.805726	1.161378e-49	-8.615850e-47
Msa0189290	Msa1322940	0.800891	1.164812e-48	-8.615850e-47
Msa0229230	Msa1322940	0.820145	8.007039e-53	-8.615850e-47
Msa1225700	Msa1322940	0.829004	6.559670e-55	-8.615850e-47
Msa1271990	Msa1322940	0.801970	7.004422e-49	-8.615850e-47
Msa1283910	Msa1322940	0.820642	6.158750e-53	-8.615850e-47
Msa1322940	Msa1330410	0.812832	3.476710e-51	-8.615850e-47
Msa1322940	Msa1372230	0.811772	5.922635e-51	-8.615850e-47
Msa1322940	Msa1445500	0.802834	4.647345e-49	-8.615850e-47
Msa0379770	Msa1322940	0.813068	3.086513e-51	-8.615850e-47
Msa0428590	Msa1322940	0.801996	6.917879e-49	-8.615850e-47
Msa1004600	Msa1322940	0.801402	9.159276e-49	-8.615850e-47
Msa1069990	Msa1322940	0.801799	7.592481e-49	-8.615850e-47
Msa1100050	Msa1322940	0.800920	1.149254e-48	-8.615850e-47
Msa1106700	Msa1322940	0.808712	2.706186e-50	-8.615850e-47
Msa0255090	Msa1322940	0.810491	1.122917e-50	-8.615850e-47
Msa0259380	Msa1322940	0.808284	3.340654e-50	-8.615850e-47
Msa0292400	Msa1322940	0.822593	2.180524e-53	-8.615850e-47
Msa1209460	Msa1322940	0.813758	2.175969e-51	-8.615850e-47
Msa0547900	Msa1322940	0.801154	1.029578e-48	-8.615850e-47
Msa0569200	Msa1322940	0.811886	5.593036e-51	-8.615850e-47
Msa0861870	Msa1322940	0.825175	5.408198e-54	-8.615850e-47
Msa0880140	Msa1322940	0.811097	8.300799e-51	-8.615850e-47
Msa0909230	Msa1322940	0.886177	4.290228e-72	-8.615850e-47
Msa0945110	Msa1322940	0.835070	2.078546e-56	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	bit score
Msa1322940	MtrunA17_Chr8g0355681	98.554	415	6	0	1	415	136	550	831
Msa1322940	MtrunA17_Chr8g0354361	92.289	415	31	1	1	415	136	549	743
Msa1322940	MtrunA17_Chr8g0355701	87.290	417	41	3	1	415	110	516	698

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1322940	AT3G21060.1	65.750	400	132	3	1	400	136	530	2.22e-175	501

Find 133 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTCATATTCTTGCAGGTAAA+AGG	0.206786	8_4:+30494365	Msa1322940:intron
ATGATGGAAGCTGTGTTATT+TGG	0.213605	8_4:+30493218	Msa1322940:five_prime_UTR
GCTACCACTTCTTCCGAAAA+TGG	0.216044	8_4:-30494578	None:intergenic
TGTGTGGCATAGTTTATATC+TGG	0.225456	8_4:+30494157	Msa1322940:CDS
CAACCCAACATCTGAGAATA+TGG	0.266985	8_4:+30495233	Msa1322940:three_prime_UTR
CTCTCCATCACCACTGAAAC+AGG	0.282312	8_4:-30493983	None:intergenic
AAATCAATCATATTTATATA+TGG	0.293497	8_4:-30495168	None:intergenic
TCCTCAATCTCTTTGAAATC+AGG	0.297441	8_4:-30494216	None:intergenic
AATGCTCTAACTTCATCTTT+TGG	0.301792	8_4:-30493835	None:intergenic
CCAGTTCTCTATGTACTCTT+TGG	0.307118	8_4:-30494181	None:intergenic
AGAGAAGGTGTTGGAGTTGC+AGG	0.309684	8_4:+30494914	Msa1322940:CDS
ATATCAGAGTCGCTGAAATT+AGG	0.326868	8_4:-30494440	None:intergenic
TGCCAAGCAGAGAGATGATT+TGG	0.342619	8_4:-30493452	None:intergenic
TGATGGTTTGCTAGAGTTTG+AGG	0.344638	8_4:-30494955	None:intergenic
TAGATAGTTCTTCGAAGATT+GGG	0.351030	8_4:+30494534	Msa1322940:CDS
GATGCCACGCTAAATCAATA+AGG	0.351990	8_4:-30494104	None:intergenic
ATCAACAAAAGATTTAGTTT+TGG	0.356149	8_4:-30494982	None:intergenic
AAAAGCCTATCTTCCTGTTC+AGG	0.357336	8_4:-30494512	None:intergenic
ATATATAAATATGATTGATT+TGG	0.359387	8_4:+30495170	Msa1322940:three_prime_UTR
GGTGATGGAGAGTGGGTTGT+TGG	0.362512	8_4:+30493994	Msa1322940:CDS
CTCCCATCACCAGTATTTGT+TGG	0.370774	8_4:+30493293	Msa1322940:five_prime_UTR
CGTGGCATGGTTTCTATCTC+TGG	0.372952	8_4:+30493712	Msa1322940:CDS
TTAGATAGTTCTTCGAAGAT+TGG	0.374218	8_4:+30494533	Msa1322940:CDS
TGATGGAAGCTGTGTTATTT+GGG	0.380302	8_4:+30493219	Msa1322940:five_prime_UTR
GAGAACCTCGGTGATCTAAA+TGG	0.383675	8_4:+30493871	Msa1322940:CDS
TTTGCTAGCTCGTCTTCATC+CGG	0.385250	8_4:+30493423	Msa1322940:five_prime_UTR
GAACCCTTGTTGCGTGAGAC+AGG	0.398687	8_4:-30493571	None:intergenic
CATTCCTGATGTTCCTGAAC+AGG	0.399964	8_4:+30494499	Msa1322940:CDS
ACACTTTGACCAACAAATAC+TGG	0.409133	8_4:-30493302	None:intergenic
GTTCCATATTCTCAGATGTT+GGG	0.418763	8_4:-30495236	None:intergenic
GGGCTTCCTTAGGCCCTTCA+AGG	0.426153	8_4:-30494083	None:intergenic
TTGCTAGCTCGTCTTCATCC+GGG	0.427639	8_4:+30493424	Msa1322940:five_prime_UTR
CAAAGAGATTGAGGAAAATG+AGG	0.433376	8_4:+30494224	Msa1322940:CDS
CTTGTAATTGACAGTAAAGA+TGG	0.434768	8_4:+30493682	Msa1322940:CDS
AAAGAAACAGACACAACAAT+TGG	0.439804	8_4:-30494135	None:intergenic
TTGTTGCGTGAGACAGGGTT+TGG	0.440027	8_4:-30493565	None:intergenic
ATTTGATAAATTGAATCAGC+TGG	0.440155	8_4:+30493190	Msa1322940:five_prime_UTR
TGAGGAAAATGAGGAGTATG+TGG	0.443627	8_4:+30494233	Msa1322940:CDS
TCCTGATTTCAAAGAGATTG+AGG	0.446776	8_4:+30494215	Msa1322940:CDS
GTGTGGCATAGTTTATATCT+GGG	0.447441	8_4:+30494158	Msa1322940:CDS
GTGTTCAAGTCAACAATCAT+TGG	0.449074	8_4:-30493493	None:intergenic
GGGATGTCTTGAGTGGTAAA+AGG	0.450323	8_4:+30493371	Msa1322940:five_prime_UTR
CTCCAAATCATCTCTCTGCT+TGG	0.452595	8_4:+30493450	Msa1322940:five_prime_UTR
TCTTCCTGTTCAGGAACATC+AGG	0.459403	8_4:-30494503	None:intergenic
ATGTTCCTGAACAGGAAGAT+AGG	0.459550	8_4:+30494507	Msa1322940:CDS
GATGGAGAGTGGGTTGTTGG+TGG	0.468537	8_4:+30493997	Msa1322940:CDS
CATGCCTCAAGTCCACTTGA+AGG	0.471872	8_4:+30494620	Msa1322940:CDS
TCACATACATTATCAGTGTC+AGG	0.473182	8_4:-30494282	None:intergenic
GAGAGCACAAGATTTACATA+TGG	0.478073	8_4:+30494034	Msa1322940:CDS
TCGGAAGAAGTGGTAGCAAA+TGG	0.478453	8_4:+30494584	Msa1322940:CDS
GAATCAGCTGGCTGCAATGA+TGG	0.479058	8_4:+30493202	Msa1322940:five_prime_UTR
TGTTCCATATTCTCAGATGT+TGG	0.481603	8_4:-30495237	None:intergenic
CATCTTGTGAAAATCCTTGA+AGG	0.482006	8_4:+30494069	Msa1322940:CDS
CCAAAGAGTACATAGAGAAC+TGG	0.483830	8_4:+30494181	Msa1322940:CDS
GTATGGAAACCTGGTTTATG+TGG	0.490370	8_4:+30493639	Msa1322940:CDS
TGACCAACAAATACTGGTGA+TGG	0.505055	8_4:-30493296	None:intergenic
GACACAACAATTGGACGTAC+AGG	0.508623	8_4:-30494126	None:intergenic
TGAAGAACATTGTATTCAGC+AGG	0.511366	8_4:+30493746	Msa1322940:CDS
ATGCCACGCTAAATCAATAA+GGG	0.511908	8_4:-30494103	None:intergenic
CTGTTCAGGAACATCAGGAA+TGG	0.514821	8_4:-30494498	None:intergenic
AACATTGTATTCAGCAGGAA+TGG	0.517859	8_4:+30493751	Msa1322940:CDS
GAGACAGGGTTTGGTCCACT+TGG	0.523067	8_4:-30493556	None:intergenic
TCACGCAACAAGGGTTCTGA+TGG	0.523362	8_4:+30493577	Msa1322940:CDS
AAATCAATAAGGGCTTCCTT+AGG	0.523475	8_4:-30494093	None:intergenic
TGTTCAGGAACATCAGGAAT+GGG	0.524926	8_4:-30494497	None:intergenic
GCACCCTGTTTCAGTGGTGA+TGG	0.531362	8_4:+30493979	Msa1322940:CDS
AACTCCAACACCTTCTCTGA+TGG	0.531649	8_4:-30494909	None:intergenic
GATGAAGACGAGCTAGCAAA+GGG	0.534466	8_4:-30493420	None:intergenic
GTTTCAGTGGTGATGGAGAG+TGG	0.534496	8_4:+30493986	Msa1322940:CDS
GTTGTGTCTGTTTCTTTGTG+TGG	0.539897	8_4:+30494141	Msa1322940:CDS
CAAGCAGAGAGATGATTTGG+AGG	0.545050	8_4:-30493449	None:intergenic
ATGCAATCACGAAAGTGCAC+TGG	0.552939	8_4:+30493953	Msa1322940:CDS
AGAGCACAAGATTTACATAT+GGG	0.555323	8_4:+30494035	Msa1322940:CDS
GAAAATCCTTGAAGGGCCTA+AGG	0.556664	8_4:+30494077	Msa1322940:CDS
AACCCTTGTTGCGTGAGACA+GGG	0.563354	8_4:-30493570	None:intergenic
TGCTAGCTCGTCTTCATCCG+GGG	0.567258	8_4:+30493425	Msa1322940:five_prime_UTR
CTTCAAGTGGACTTGAGGCA+TGG	0.571372	8_4:-30494619	None:intergenic
AGATAGTTCTTCGAAGATTG+GGG	0.573049	8_4:+30494535	Msa1322940:CDS
AAACCCTGTCTCACGCAACA+AGG	0.574516	8_4:+30493567	Msa1322940:CDS
ATTGGGGACAGCAATAACTC+TGG	0.576784	8_4:+30494551	Msa1322940:CDS
TTTCAGTGGTGATGGAGAGT+GGG	0.579791	8_4:+30493987	Msa1322940:CDS
TGGAAGGCACCCTGTTTCAG+TGG	0.579970	8_4:+30493973	Msa1322940:CDS
ATTTACATATGGGATAGAGC+TGG	0.580981	8_4:+30494045	Msa1322940:CDS
TCTGCTGTCATTCATCAGAC+AGG	0.583056	8_4:-30495040	None:intergenic
ATTACCTTCAAGTGGACTTG+AGG	0.584311	8_4:-30494624	None:intergenic
ATTATTTACAGATGATGCTG+TGG	0.585458	8_4:+30494860	Msa1322940:intron
TCGAGTTTCCCACATAAACC+AGG	0.588345	8_4:-30493648	None:intergenic
AGTAACATGAGTGAGAAAGT+TGG	0.588888	8_4:-30493165	None:intergenic
AAATGGTGTTGAGAAGTTGA+AGG	0.591187	8_4:+30493888	Msa1322940:CDS
ATCTGATGTCAATGAAGATG+AGG	0.592161	8_4:+30494388	Msa1322940:CDS
GTTGGTGGTTCTGCTAGCAA+AGG	0.593351	8_4:+30494012	Msa1322940:CDS
GGCGTGACATTACCTTCAAG+TGG	0.593844	8_4:-30494632	None:intergenic
TGGGAACAAGAATTAAAAGA+AGG	0.594470	8_4:+30494880	Msa1322940:CDS
TTACTAAAACATGCAGCAGT+AGG	0.595182	8_4:-30493616	None:intergenic
GTTTGATTTAATATACAGCA+AGG	0.600378	8_4:+30495272	Msa1322940:three_prime_UTR
GACCAACAAATACTGGTGAT+GGG	0.601286	8_4:-30493295	None:intergenic
TAGATAACGTAGCTCTTCCT+CGG	0.601900	8_4:-30494465	None:intergenic
GGATGAAGACGAGCTAGCAA+AGG	0.602138	8_4:-30493421	None:intergenic
ATCTTGTGAAAATCCTTGAA+GGG	0.602213	8_4:+30494070	Msa1322940:CDS
GGCATGGTTTCTATCTCTGG+TGG	0.603497	8_4:+30493715	Msa1322940:CDS
ACATGCAGCAGTAGGTGTGA+AGG	0.605285	8_4:-30493608	None:intergenic
GAAACCATCAGAGAAGGTGT+TGG	0.608768	8_4:+30494905	Msa1322940:CDS
AGATGGTGAGGTGCGTGGCA+TGG	0.609126	8_4:+30493699	Msa1322940:CDS
TATGGAAACCTGGTTTATGT+GGG	0.609917	8_4:+30493640	Msa1322940:CDS
TGACAAGTCGTTATCCCTGT+GGG	0.614779	8_4:+30493351	Msa1322940:five_prime_UTR
TACCACTCAAGACATCCCAC+AGG	0.615382	8_4:-30493366	None:intergenic
AACCCTGTCTCACGCAACAA+GGG	0.615851	8_4:+30493568	Msa1322940:CDS
TCTGTTTCTGACAAACCAAG+TGG	0.618438	8_4:+30493541	Msa1322940:CDS
AGAGATGATTTGGAGGACCC+CGG	0.619630	8_4:-30493442	None:intergenic
TGACATTGTGACAGTCGAGA+AGG	0.620507	8_4:+30494415	Msa1322940:CDS
AAGGCGGAAACCATCAGAGA+AGG	0.621405	8_4:+30494899	Msa1322940:CDS
TTAATATACAGCAAGGCCAA+TGG	0.622591	8_4:+30495279	Msa1322940:three_prime_UTR
ACATCAGGAATGGGAGACAC+TGG	0.624457	8_4:-30494488	None:intergenic
AGTATTTGTTGGTCAAAGTG+TGG	0.624701	8_4:+30493304	Msa1322940:five_prime_UTR
CTGACAAGTCGTTATCCCTG+TGG	0.627369	8_4:+30493350	Msa1322940:five_prime_UTR
GTTTATGTGGGAAACTCGAA+AGG	0.631466	8_4:+30493652	Msa1322940:CDS
TGATTGCATCTTGAAACTCA+CGG	0.633891	8_4:-30493939	None:intergenic
ATCATTGGAGCACATGAGAG+AGG	0.635797	8_4:-30493478	None:intergenic
TTATTTACAGATGATGCTGT+GGG	0.638305	8_4:+30494861	Msa1322940:intron
TCTCCATCACCACTGAAACA+GGG	0.640101	8_4:-30493982	None:intergenic
GAACAAGAATTAAAAGAAGG+CGG	0.644668	8_4:+30494883	Msa1322940:CDS
TCCCTGTGGGATGTCTTGAG+TGG	0.645082	8_4:+30493364	Msa1322940:five_prime_UTR
AAGCCCTTATTGATTTAGCG+TGG	0.655079	8_4:+30494100	Msa1322940:CDS
TGCAGCAGTAGGTGTGAAGG+AGG	0.657772	8_4:-30493605	None:intergenic
ACCACTCAAGACATCCCACA+GGG	0.671936	8_4:-30493365	None:intergenic
CAGCGACTCTGATATGTCCG+AGG	0.676024	8_4:+30494448	Msa1322940:CDS
GCTGAATTGAACGAGAACCT+CGG	0.676455	8_4:+30493859	Msa1322940:CDS
GTTGAGAAGTTGAAGGCTGT+AGG	0.680893	8_4:+30493895	Msa1322940:CDS
AGTAAAGATGGTGAGGTGCG+TGG	0.690847	8_4:+30493694	Msa1322940:CDS
AATCACGAAAGTGCACTGGA+AGG	0.694138	8_4:+30493957	Msa1322940:CDS
AATTGACAGTAAAGATGGTG+AGG	0.704790	8_4:+30493687	Msa1322940:CDS
CAACACCATTTAGATCACCG+AGG	0.738329	8_4:-30493876	None:intergenic
ATGAAGACGAGCTAGCAAAG+GGG	0.760208	8_4:-30493419	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATCAATCATATTTATATA+TGG	-	chr8_4:30495171-30495190	None:intergenic	10.0%
!!	ATATATAAATATGATTGATT+TGG	+	chr8_4:30495170-30495189	Msa1322940:three_prime_UTR	10.0%
!!	AAATCAATCATATTTATATA+TGG	-	chr8_4:30495171-30495190	None:intergenic	10.0%
!!	ATATATAAATATGATTGATT+TGG	+	chr8_4:30495170-30495189	Msa1322940:three_prime_UTR	10.0%
!!!	TTCTTTTCTTTTCCATTTTA+TGG	+	chr8_4:30494331-30494350	Msa1322940:intron	20.0%
!!	AACAGTTCAATTGAAAAATA+GGG	-	chr8_4:30494701-30494720	None:intergenic	20.0%
!!!	ATCAACAAAAGATTTAGTTT+TGG	-	chr8_4:30494985-30495004	None:intergenic	20.0%
!!!	TTCTTTTCTTTTCCATTTTA+TGG	+	chr8_4:30494331-30494350	Msa1322940:intron	20.0%
!!	AACAGTTCAATTGAAAAATA+GGG	-	chr8_4:30494701-30494720	None:intergenic	20.0%
!!!	ATCAACAAAAGATTTAGTTT+TGG	-	chr8_4:30494985-30495004	None:intergenic	20.0%
!	ATTTGATAAATTGAATCAGC+TGG	+	chr8_4:30493190-30493209	Msa1322940:five_prime_UTR	25.0%
!	TAATGTATGTGAACGTTATA+TGG	+	chr8_4:30494293-30494312	Msa1322940:intron	25.0%
!	ACTTTGTTAAGACCATAAAA+TGG	-	chr8_4:30494346-30494365	None:intergenic	25.0%
!!	TGTTACAAGCATATTTTGTA+TGG	-	chr8_4:30494656-30494675	None:intergenic	25.0%
!	CAACAGTTCAATTGAAAAAT+AGG	-	chr8_4:30494702-30494721	None:intergenic	25.0%
!	TCATCTGTAAATAATGTTGA+AGG	-	chr8_4:30494855-30494874	None:intergenic	25.0%
!!	GTTTGATTTAATATACAGCA+AGG	+	chr8_4:30495272-30495291	Msa1322940:three_prime_UTR	25.0%
!	ATTTGATAAATTGAATCAGC+TGG	+	chr8_4:30493190-30493209	Msa1322940:five_prime_UTR	25.0%
!	TAATGTATGTGAACGTTATA+TGG	+	chr8_4:30494293-30494312	Msa1322940:intron	25.0%
!	ACTTTGTTAAGACCATAAAA+TGG	-	chr8_4:30494346-30494365	None:intergenic	25.0%
!!	TGTTACAAGCATATTTTGTA+TGG	-	chr8_4:30494656-30494675	None:intergenic	25.0%
!	CAACAGTTCAATTGAAAAAT+AGG	-	chr8_4:30494702-30494721	None:intergenic	25.0%
!	TCATCTGTAAATAATGTTGA+AGG	-	chr8_4:30494855-30494874	None:intergenic	25.0%
!!	GTTTGATTTAATATACAGCA+AGG	+	chr8_4:30495272-30495291	Msa1322940:three_prime_UTR	25.0%
!!!	TTATTTGGGATTTTGAAGTC+AGG	+	chr8_4:30493233-30493252	Msa1322940:five_prime_UTR	30.0%
!!!	TATTTGGGATTTTGAAGTCA+GGG	+	chr8_4:30493234-30493253	Msa1322940:five_prime_UTR	30.0%
!	TTTTAGTAAGTATGGAAACC+TGG	+	chr8_4:30493630-30493649	Msa1322940:CDS	30.0%
	CTTGTAATTGACAGTAAAGA+TGG	+	chr8_4:30493682-30493701	Msa1322940:CDS	30.0%
!	AATGCTCTAACTTCATCTTT+TGG	-	chr8_4:30493838-30493857	None:intergenic	30.0%
	AGAGCACAAGATTTACATAT+GGG	+	chr8_4:30494035-30494054	Msa1322940:CDS	30.0%
	ATCTTGTGAAAATCCTTGAA+GGG	+	chr8_4:30494070-30494089	Msa1322940:CDS	30.0%
	AAAGAAACAGACACAACAAT+TGG	-	chr8_4:30494138-30494157	None:intergenic	30.0%
	AACAAAGTTCATATTCTTGC+AGG	+	chr8_4:30494358-30494377	Msa1322940:intron	30.0%
	TTCATATTCTTGCAGGTAAA+AGG	+	chr8_4:30494365-30494384	Msa1322940:intron	30.0%
	TTAGATAGTTCTTCGAAGAT+TGG	+	chr8_4:30494533-30494552	Msa1322940:CDS	30.0%
	TAGATAGTTCTTCGAAGATT+GGG	+	chr8_4:30494534-30494553	Msa1322940:CDS	30.0%
	GAAGAAACCTAAACTCATAA+AGG	-	chr8_4:30494740-30494759	None:intergenic	30.0%
!	TCAAATTCTGAGAACAACAT+GGG	-	chr8_4:30494763-30494782	None:intergenic	30.0%
!	TTCAAATTCTGAGAACAACA+TGG	-	chr8_4:30494764-30494783	None:intergenic	30.0%
	ATTATTTACAGATGATGCTG+TGG	+	chr8_4:30494860-30494879	Msa1322940:intron	30.0%
	TTATTTACAGATGATGCTGT+GGG	+	chr8_4:30494861-30494880	Msa1322940:intron	30.0%
	TGGGAACAAGAATTAAAAGA+AGG	+	chr8_4:30494880-30494899	Msa1322940:CDS	30.0%
	GAACAAGAATTAAAAGAAGG+CGG	+	chr8_4:30494883-30494902	Msa1322940:CDS	30.0%
!!!	GATTTAGTTTTGGTTCTTGA+TGG	-	chr8_4:30494975-30494994	None:intergenic	30.0%
!	TTGCTTAGCAAATTTTCATC+AGG	+	chr8_4:30495135-30495154	Msa1322940:three_prime_UTR	30.0%
!	TTAGCAAATTTTCATCAGGT+GGG	+	chr8_4:30495139-30495158	Msa1322940:three_prime_UTR	30.0%
!!!	TTATTTGGGATTTTGAAGTC+AGG	+	chr8_4:30493233-30493252	Msa1322940:five_prime_UTR	30.0%
!!!	TATTTGGGATTTTGAAGTCA+GGG	+	chr8_4:30493234-30493253	Msa1322940:five_prime_UTR	30.0%
!	TTTTAGTAAGTATGGAAACC+TGG	+	chr8_4:30493630-30493649	Msa1322940:CDS	30.0%
	CTTGTAATTGACAGTAAAGA+TGG	+	chr8_4:30493682-30493701	Msa1322940:CDS	30.0%
!	AATGCTCTAACTTCATCTTT+TGG	-	chr8_4:30493838-30493857	None:intergenic	30.0%
	AGAGCACAAGATTTACATAT+GGG	+	chr8_4:30494035-30494054	Msa1322940:CDS	30.0%
	ATCTTGTGAAAATCCTTGAA+GGG	+	chr8_4:30494070-30494089	Msa1322940:CDS	30.0%
	AAAGAAACAGACACAACAAT+TGG	-	chr8_4:30494138-30494157	None:intergenic	30.0%
	AACAAAGTTCATATTCTTGC+AGG	+	chr8_4:30494358-30494377	Msa1322940:intron	30.0%
	TTCATATTCTTGCAGGTAAA+AGG	+	chr8_4:30494365-30494384	Msa1322940:intron	30.0%
	TTAGATAGTTCTTCGAAGAT+TGG	+	chr8_4:30494533-30494552	Msa1322940:CDS	30.0%
	TAGATAGTTCTTCGAAGATT+GGG	+	chr8_4:30494534-30494553	Msa1322940:CDS	30.0%
	GAAGAAACCTAAACTCATAA+AGG	-	chr8_4:30494740-30494759	None:intergenic	30.0%
!	TCAAATTCTGAGAACAACAT+GGG	-	chr8_4:30494763-30494782	None:intergenic	30.0%
!	TTCAAATTCTGAGAACAACA+TGG	-	chr8_4:30494764-30494783	None:intergenic	30.0%
	ATTATTTACAGATGATGCTG+TGG	+	chr8_4:30494860-30494879	Msa1322940:intron	30.0%
	TTATTTACAGATGATGCTGT+GGG	+	chr8_4:30494861-30494880	Msa1322940:intron	30.0%
	TGGGAACAAGAATTAAAAGA+AGG	+	chr8_4:30494880-30494899	Msa1322940:CDS	30.0%
	GAACAAGAATTAAAAGAAGG+CGG	+	chr8_4:30494883-30494902	Msa1322940:CDS	30.0%
!!!	GATTTAGTTTTGGTTCTTGA+TGG	-	chr8_4:30494975-30494994	None:intergenic	30.0%
!	TTGCTTAGCAAATTTTCATC+AGG	+	chr8_4:30495135-30495154	Msa1322940:three_prime_UTR	30.0%
!	TTAGCAAATTTTCATCAGGT+GGG	+	chr8_4:30495139-30495158	Msa1322940:three_prime_UTR	30.0%
	AGTAACATGAGTGAGAAAGT+TGG	-	chr8_4:30493168-30493187	None:intergenic	35.0%
!	ATGATGGAAGCTGTGTTATT+TGG	+	chr8_4:30493218-30493237	Msa1322940:five_prime_UTR	35.0%
!!	TGATGGAAGCTGTGTTATTT+GGG	+	chr8_4:30493219-30493238	Msa1322940:five_prime_UTR	35.0%
!!!	ATTTGGGATTTTGAAGTCAG+GGG	+	chr8_4:30493235-30493254	Msa1322940:five_prime_UTR	35.0%
	ACACTTTGACCAACAAATAC+TGG	-	chr8_4:30493305-30493324	None:intergenic	35.0%
!	AGTATTTGTTGGTCAAAGTG+TGG	+	chr8_4:30493304-30493323	Msa1322940:five_prime_UTR	35.0%
	GTGTTCAAGTCAACAATCAT+TGG	-	chr8_4:30493496-30493515	None:intergenic	35.0%
	TTACTAAAACATGCAGCAGT+AGG	-	chr8_4:30493619-30493638	None:intergenic	35.0%
!!!	GCTGCATGTTTTAGTAAGTA+TGG	+	chr8_4:30493622-30493641	Msa1322940:CDS	35.0%
	TATGGAAACCTGGTTTATGT+GGG	+	chr8_4:30493640-30493659	Msa1322940:CDS	35.0%
	AATTGACAGTAAAGATGGTG+AGG	+	chr8_4:30493687-30493706	Msa1322940:CDS	35.0%
	TGAAGAACATTGTATTCAGC+AGG	+	chr8_4:30493746-30493765	Msa1322940:CDS	35.0%
	AACATTGTATTCAGCAGGAA+TGG	+	chr8_4:30493751-30493770	Msa1322940:CDS	35.0%
!	AAATGGTGTTGAGAAGTTGA+AGG	+	chr8_4:30493888-30493907	Msa1322940:CDS	35.0%
	TGATTGCATCTTGAAACTCA+CGG	-	chr8_4:30493942-30493961	None:intergenic	35.0%
!	GAGAGCACAAGATTTACATA+TGG	+	chr8_4:30494034-30494053	Msa1322940:CDS	35.0%
	ATTTACATATGGGATAGAGC+TGG	+	chr8_4:30494045-30494064	Msa1322940:CDS	35.0%
	CATCTTGTGAAAATCCTTGA+AGG	+	chr8_4:30494069-30494088	Msa1322940:CDS	35.0%
	AAATCAATAAGGGCTTCCTT+AGG	-	chr8_4:30494096-30494115	None:intergenic	35.0%
	ATGCCACGCTAAATCAATAA+GGG	-	chr8_4:30494106-30494125	None:intergenic	35.0%
	TGTGTGGCATAGTTTATATC+TGG	+	chr8_4:30494157-30494176	Msa1322940:CDS	35.0%
	GTGTGGCATAGTTTATATCT+GGG	+	chr8_4:30494158-30494177	Msa1322940:CDS	35.0%
	TCCTGATTTCAAAGAGATTG+AGG	+	chr8_4:30494215-30494234	Msa1322940:CDS	35.0%
!!	TCCTCAATCTCTTTGAAATC+AGG	-	chr8_4:30494219-30494238	None:intergenic	35.0%
	CAAAGAGATTGAGGAAAATG+AGG	+	chr8_4:30494224-30494243	Msa1322940:CDS	35.0%
	TCACATACATTATCAGTGTC+AGG	-	chr8_4:30494285-30494304	None:intergenic	35.0%
	TGTGAACGTTATATGGTCAT+AGG	+	chr8_4:30494300-30494319	Msa1322940:intron	35.0%
	ATCTGATGTCAATGAAGATG+AGG	+	chr8_4:30494388-30494407	Msa1322940:CDS	35.0%
	ATATCAGAGTCGCTGAAATT+AGG	-	chr8_4:30494443-30494462	None:intergenic	35.0%
	AGATAGTTCTTCGAAGATTG+GGG	+	chr8_4:30494535-30494554	Msa1322940:CDS	35.0%
!	TAACTCTGGATCACCATTTT+CGG	+	chr8_4:30494565-30494584	Msa1322940:CDS	35.0%
	AACTGTTGAAACACTTTGTG+AGG	+	chr8_4:30494714-30494733	Msa1322940:intron	35.0%
!	CAAATTCTGAGAACAACATG+GGG	-	chr8_4:30494762-30494781	None:intergenic	35.0%
!!	TCTTTTGTTGATGAGAGCAA+TGG	+	chr8_4:30494993-30495012	Msa1322940:CDS	35.0%
!	CTTAGCAAATTTTCATCAGG+TGG	+	chr8_4:30495138-30495157	Msa1322940:three_prime_UTR	35.0%
	GTTCCATATTCTCAGATGTT+GGG	-	chr8_4:30495239-30495258	None:intergenic	35.0%
	TGTTCCATATTCTCAGATGT+TGG	-	chr8_4:30495240-30495259	None:intergenic	35.0%
	TTAATATACAGCAAGGCCAA+TGG	+	chr8_4:30495279-30495298	Msa1322940:three_prime_UTR	35.0%
	AGTAACATGAGTGAGAAAGT+TGG	-	chr8_4:30493168-30493187	None:intergenic	35.0%
!	ATGATGGAAGCTGTGTTATT+TGG	+	chr8_4:30493218-30493237	Msa1322940:five_prime_UTR	35.0%
!!	TGATGGAAGCTGTGTTATTT+GGG	+	chr8_4:30493219-30493238	Msa1322940:five_prime_UTR	35.0%
!!!	ATTTGGGATTTTGAAGTCAG+GGG	+	chr8_4:30493235-30493254	Msa1322940:five_prime_UTR	35.0%
	ACACTTTGACCAACAAATAC+TGG	-	chr8_4:30493305-30493324	None:intergenic	35.0%
!	AGTATTTGTTGGTCAAAGTG+TGG	+	chr8_4:30493304-30493323	Msa1322940:five_prime_UTR	35.0%
	GTGTTCAAGTCAACAATCAT+TGG	-	chr8_4:30493496-30493515	None:intergenic	35.0%
	TTACTAAAACATGCAGCAGT+AGG	-	chr8_4:30493619-30493638	None:intergenic	35.0%
!!!	GCTGCATGTTTTAGTAAGTA+TGG	+	chr8_4:30493622-30493641	Msa1322940:CDS	35.0%
	TATGGAAACCTGGTTTATGT+GGG	+	chr8_4:30493640-30493659	Msa1322940:CDS	35.0%
	AATTGACAGTAAAGATGGTG+AGG	+	chr8_4:30493687-30493706	Msa1322940:CDS	35.0%
	TGAAGAACATTGTATTCAGC+AGG	+	chr8_4:30493746-30493765	Msa1322940:CDS	35.0%
	AACATTGTATTCAGCAGGAA+TGG	+	chr8_4:30493751-30493770	Msa1322940:CDS	35.0%
!	AAATGGTGTTGAGAAGTTGA+AGG	+	chr8_4:30493888-30493907	Msa1322940:CDS	35.0%
	TGATTGCATCTTGAAACTCA+CGG	-	chr8_4:30493942-30493961	None:intergenic	35.0%
!	GAGAGCACAAGATTTACATA+TGG	+	chr8_4:30494034-30494053	Msa1322940:CDS	35.0%
	ATTTACATATGGGATAGAGC+TGG	+	chr8_4:30494045-30494064	Msa1322940:CDS	35.0%
	CATCTTGTGAAAATCCTTGA+AGG	+	chr8_4:30494069-30494088	Msa1322940:CDS	35.0%
	AAATCAATAAGGGCTTCCTT+AGG	-	chr8_4:30494096-30494115	None:intergenic	35.0%
	ATGCCACGCTAAATCAATAA+GGG	-	chr8_4:30494106-30494125	None:intergenic	35.0%
	TGTGTGGCATAGTTTATATC+TGG	+	chr8_4:30494157-30494176	Msa1322940:CDS	35.0%
	GTGTGGCATAGTTTATATCT+GGG	+	chr8_4:30494158-30494177	Msa1322940:CDS	35.0%
	TCCTGATTTCAAAGAGATTG+AGG	+	chr8_4:30494215-30494234	Msa1322940:CDS	35.0%
!!	TCCTCAATCTCTTTGAAATC+AGG	-	chr8_4:30494219-30494238	None:intergenic	35.0%
	CAAAGAGATTGAGGAAAATG+AGG	+	chr8_4:30494224-30494243	Msa1322940:CDS	35.0%
	TCACATACATTATCAGTGTC+AGG	-	chr8_4:30494285-30494304	None:intergenic	35.0%
	TGTGAACGTTATATGGTCAT+AGG	+	chr8_4:30494300-30494319	Msa1322940:intron	35.0%
	ATCTGATGTCAATGAAGATG+AGG	+	chr8_4:30494388-30494407	Msa1322940:CDS	35.0%
	ATATCAGAGTCGCTGAAATT+AGG	-	chr8_4:30494443-30494462	None:intergenic	35.0%
	AGATAGTTCTTCGAAGATTG+GGG	+	chr8_4:30494535-30494554	Msa1322940:CDS	35.0%
!	TAACTCTGGATCACCATTTT+CGG	+	chr8_4:30494565-30494584	Msa1322940:CDS	35.0%
	AACTGTTGAAACACTTTGTG+AGG	+	chr8_4:30494714-30494733	Msa1322940:intron	35.0%
!	CAAATTCTGAGAACAACATG+GGG	-	chr8_4:30494762-30494781	None:intergenic	35.0%
!!	TCTTTTGTTGATGAGAGCAA+TGG	+	chr8_4:30494993-30495012	Msa1322940:CDS	35.0%
!	CTTAGCAAATTTTCATCAGG+TGG	+	chr8_4:30495138-30495157	Msa1322940:three_prime_UTR	35.0%
	GTTCCATATTCTCAGATGTT+GGG	-	chr8_4:30495239-30495258	None:intergenic	35.0%
	TGTTCCATATTCTCAGATGT+TGG	-	chr8_4:30495240-30495259	None:intergenic	35.0%
	TTAATATACAGCAAGGCCAA+TGG	+	chr8_4:30495279-30495298	Msa1322940:three_prime_UTR	35.0%
	GACCAACAAATACTGGTGAT+GGG	-	chr8_4:30493298-30493317	None:intergenic	40.0%
	TGACCAACAAATACTGGTGA+TGG	-	chr8_4:30493299-30493318	None:intergenic	40.0%
!!	TCTGTTTCTGACAAACCAAG+TGG	+	chr8_4:30493541-30493560	Msa1322940:CDS	40.0%
	GTATGGAAACCTGGTTTATG+TGG	+	chr8_4:30493639-30493658	Msa1322940:CDS	40.0%
	GTTTATGTGGGAAACTCGAA+AGG	+	chr8_4:30493652-30493671	Msa1322940:CDS	40.0%
!	GCTCTAACTTCATCTTTTGG+TGG	-	chr8_4:30493835-30493854	None:intergenic	40.0%
!!	AAGCCCTTATTGATTTAGCG+TGG	+	chr8_4:30494100-30494119	Msa1322940:CDS	40.0%
	GATGCCACGCTAAATCAATA+AGG	-	chr8_4:30494107-30494126	None:intergenic	40.0%
!	GTTGTGTCTGTTTCTTTGTG+TGG	+	chr8_4:30494141-30494160	Msa1322940:CDS	40.0%
	CCAGTTCTCTATGTACTCTT+TGG	-	chr8_4:30494184-30494203	None:intergenic	40.0%
!	CCAAAGAGTACATAGAGAAC+TGG	+	chr8_4:30494181-30494200	Msa1322940:CDS	40.0%
!	TGAGGAAAATGAGGAGTATG+TGG	+	chr8_4:30494233-30494252	Msa1322940:CDS	40.0%
	TAGATAACGTAGCTCTTCCT+CGG	-	chr8_4:30494468-30494487	None:intergenic	40.0%
	TGTTCAGGAACATCAGGAAT+GGG	-	chr8_4:30494500-30494519	None:intergenic	40.0%
	ATGTTCCTGAACAGGAAGAT+AGG	+	chr8_4:30494507-30494526	Msa1322940:CDS	40.0%
	AAAAGCCTATCTTCCTGTTC+AGG	-	chr8_4:30494515-30494534	None:intergenic	40.0%
!	ATCACCATTTTCGGAAGAAG+TGG	+	chr8_4:30494574-30494593	Msa1322940:CDS	40.0%
!	ATTACCTTCAAGTGGACTTG+AGG	-	chr8_4:30494627-30494646	None:intergenic	40.0%
	TGTGAGGCCTTTATGAGTTT+AGG	+	chr8_4:30494730-30494749	Msa1322940:intron	40.0%
!!	TGATGGTTTGCTAGAGTTTG+AGG	-	chr8_4:30494958-30494977	None:intergenic	40.0%
	CAACCCAACATCTGAGAATA+TGG	+	chr8_4:30495233-30495252	Msa1322940:three_prime_UTR	40.0%
	GACCAACAAATACTGGTGAT+GGG	-	chr8_4:30493298-30493317	None:intergenic	40.0%
	TGACCAACAAATACTGGTGA+TGG	-	chr8_4:30493299-30493318	None:intergenic	40.0%
!!	TCTGTTTCTGACAAACCAAG+TGG	+	chr8_4:30493541-30493560	Msa1322940:CDS	40.0%
	GTATGGAAACCTGGTTTATG+TGG	+	chr8_4:30493639-30493658	Msa1322940:CDS	40.0%
	GTTTATGTGGGAAACTCGAA+AGG	+	chr8_4:30493652-30493671	Msa1322940:CDS	40.0%
!	GCTCTAACTTCATCTTTTGG+TGG	-	chr8_4:30493835-30493854	None:intergenic	40.0%
!!	AAGCCCTTATTGATTTAGCG+TGG	+	chr8_4:30494100-30494119	Msa1322940:CDS	40.0%
	GATGCCACGCTAAATCAATA+AGG	-	chr8_4:30494107-30494126	None:intergenic	40.0%
!	GTTGTGTCTGTTTCTTTGTG+TGG	+	chr8_4:30494141-30494160	Msa1322940:CDS	40.0%
	CCAGTTCTCTATGTACTCTT+TGG	-	chr8_4:30494184-30494203	None:intergenic	40.0%
!	CCAAAGAGTACATAGAGAAC+TGG	+	chr8_4:30494181-30494200	Msa1322940:CDS	40.0%
!	TGAGGAAAATGAGGAGTATG+TGG	+	chr8_4:30494233-30494252	Msa1322940:CDS	40.0%
	TAGATAACGTAGCTCTTCCT+CGG	-	chr8_4:30494468-30494487	None:intergenic	40.0%
	TGTTCAGGAACATCAGGAAT+GGG	-	chr8_4:30494500-30494519	None:intergenic	40.0%
	ATGTTCCTGAACAGGAAGAT+AGG	+	chr8_4:30494507-30494526	Msa1322940:CDS	40.0%
	AAAAGCCTATCTTCCTGTTC+AGG	-	chr8_4:30494515-30494534	None:intergenic	40.0%
!	ATCACCATTTTCGGAAGAAG+TGG	+	chr8_4:30494574-30494593	Msa1322940:CDS	40.0%
!	ATTACCTTCAAGTGGACTTG+AGG	-	chr8_4:30494627-30494646	None:intergenic	40.0%
	TGTGAGGCCTTTATGAGTTT+AGG	+	chr8_4:30494730-30494749	Msa1322940:intron	40.0%
!!	TGATGGTTTGCTAGAGTTTG+AGG	-	chr8_4:30494958-30494977	None:intergenic	40.0%
	CAACCCAACATCTGAGAATA+TGG	+	chr8_4:30495233-30495252	Msa1322940:three_prime_UTR	40.0%
	CTCCCATCACCAGTATTTGT+TGG	+	chr8_4:30493293-30493312	Msa1322940:five_prime_UTR	45.0%
	TGACAAGTCGTTATCCCTGT+GGG	+	chr8_4:30493351-30493370	Msa1322940:five_prime_UTR	45.0%
	GGGATGTCTTGAGTGGTAAA+AGG	+	chr8_4:30493371-30493390	Msa1322940:five_prime_UTR	45.0%
	ATGAAGACGAGCTAGCAAAG+GGG	-	chr8_4:30493422-30493441	None:intergenic	45.0%
	GATGAAGACGAGCTAGCAAA+GGG	-	chr8_4:30493423-30493442	None:intergenic	45.0%
	TTTGCTAGCTCGTCTTCATC+CGG	+	chr8_4:30493423-30493442	Msa1322940:five_prime_UTR	45.0%
!	CAAGCAGAGAGATGATTTGG+AGG	-	chr8_4:30493452-30493471	None:intergenic	45.0%
	CTCCAAATCATCTCTCTGCT+TGG	+	chr8_4:30493450-30493469	Msa1322940:five_prime_UTR	45.0%
	TGCCAAGCAGAGAGATGATT+TGG	-	chr8_4:30493455-30493474	None:intergenic	45.0%
	ATCATTGGAGCACATGAGAG+AGG	-	chr8_4:30493481-30493500	None:intergenic	45.0%
	TCGAGTTTCCCACATAAACC+AGG	-	chr8_4:30493651-30493670	None:intergenic	45.0%
	GCTGAATTGAACGAGAACCT+CGG	+	chr8_4:30493859-30493878	Msa1322940:CDS	45.0%
	GAGAACCTCGGTGATCTAAA+TGG	+	chr8_4:30493871-30493890	Msa1322940:CDS	45.0%
	CAACACCATTTAGATCACCG+AGG	-	chr8_4:30493879-30493898	None:intergenic	45.0%
	GTTGAGAAGTTGAAGGCTGT+AGG	+	chr8_4:30493895-30493914	Msa1322940:CDS	45.0%
!	ATGCAATCACGAAAGTGCAC+TGG	+	chr8_4:30493953-30493972	Msa1322940:CDS	45.0%
!	AATCACGAAAGTGCACTGGA+AGG	+	chr8_4:30493957-30493976	Msa1322940:CDS	45.0%
	TCTCCATCACCACTGAAACA+GGG	-	chr8_4:30493985-30494004	None:intergenic	45.0%
!!	TTTCAGTGGTGATGGAGAGT+GGG	+	chr8_4:30493987-30494006	Msa1322940:CDS	45.0%
	GAAAATCCTTGAAGGGCCTA+AGG	+	chr8_4:30494077-30494096	Msa1322940:CDS	45.0%
	GACACAACAATTGGACGTAC+AGG	-	chr8_4:30494129-30494148	None:intergenic	45.0%
	TGACATTGTGACAGTCGAGA+AGG	+	chr8_4:30494415-30494434	Msa1322940:CDS	45.0%
	CTGTTCAGGAACATCAGGAA+TGG	-	chr8_4:30494501-30494520	None:intergenic	45.0%
	CATTCCTGATGTTCCTGAAC+AGG	+	chr8_4:30494499-30494518	Msa1322940:CDS	45.0%
	TCTTCCTGTTCAGGAACATC+AGG	-	chr8_4:30494506-30494525	None:intergenic	45.0%
	ATTGGGGACAGCAATAACTC+TGG	+	chr8_4:30494551-30494570	Msa1322940:CDS	45.0%
	GCTACCACTTCTTCCGAAAA+TGG	-	chr8_4:30494581-30494600	None:intergenic	45.0%
	TCGGAAGAAGTGGTAGCAAA+TGG	+	chr8_4:30494584-30494603	Msa1322940:CDS	45.0%
!	GAAACCATCAGAGAAGGTGT+TGG	+	chr8_4:30494905-30494924	Msa1322940:CDS	45.0%
	AACTCCAACACCTTCTCTGA+TGG	-	chr8_4:30494912-30494931	None:intergenic	45.0%
	TCTGCTGTCATTCATCAGAC+AGG	-	chr8_4:30495043-30495062	None:intergenic	45.0%
	CTCCCATCACCAGTATTTGT+TGG	+	chr8_4:30493293-30493312	Msa1322940:five_prime_UTR	45.0%
	TGACAAGTCGTTATCCCTGT+GGG	+	chr8_4:30493351-30493370	Msa1322940:five_prime_UTR	45.0%
	GGGATGTCTTGAGTGGTAAA+AGG	+	chr8_4:30493371-30493390	Msa1322940:five_prime_UTR	45.0%
	ATGAAGACGAGCTAGCAAAG+GGG	-	chr8_4:30493422-30493441	None:intergenic	45.0%
	GATGAAGACGAGCTAGCAAA+GGG	-	chr8_4:30493423-30493442	None:intergenic	45.0%
	TTTGCTAGCTCGTCTTCATC+CGG	+	chr8_4:30493423-30493442	Msa1322940:five_prime_UTR	45.0%
!	CAAGCAGAGAGATGATTTGG+AGG	-	chr8_4:30493452-30493471	None:intergenic	45.0%
	CTCCAAATCATCTCTCTGCT+TGG	+	chr8_4:30493450-30493469	Msa1322940:five_prime_UTR	45.0%
	TGCCAAGCAGAGAGATGATT+TGG	-	chr8_4:30493455-30493474	None:intergenic	45.0%
	ATCATTGGAGCACATGAGAG+AGG	-	chr8_4:30493481-30493500	None:intergenic	45.0%
	TCGAGTTTCCCACATAAACC+AGG	-	chr8_4:30493651-30493670	None:intergenic	45.0%
	GCTGAATTGAACGAGAACCT+CGG	+	chr8_4:30493859-30493878	Msa1322940:CDS	45.0%
	GAGAACCTCGGTGATCTAAA+TGG	+	chr8_4:30493871-30493890	Msa1322940:CDS	45.0%
	CAACACCATTTAGATCACCG+AGG	-	chr8_4:30493879-30493898	None:intergenic	45.0%
	GTTGAGAAGTTGAAGGCTGT+AGG	+	chr8_4:30493895-30493914	Msa1322940:CDS	45.0%
!	ATGCAATCACGAAAGTGCAC+TGG	+	chr8_4:30493953-30493972	Msa1322940:CDS	45.0%
!	AATCACGAAAGTGCACTGGA+AGG	+	chr8_4:30493957-30493976	Msa1322940:CDS	45.0%
	TCTCCATCACCACTGAAACA+GGG	-	chr8_4:30493985-30494004	None:intergenic	45.0%
!!	TTTCAGTGGTGATGGAGAGT+GGG	+	chr8_4:30493987-30494006	Msa1322940:CDS	45.0%
	GAAAATCCTTGAAGGGCCTA+AGG	+	chr8_4:30494077-30494096	Msa1322940:CDS	45.0%
	GACACAACAATTGGACGTAC+AGG	-	chr8_4:30494129-30494148	None:intergenic	45.0%
	TGACATTGTGACAGTCGAGA+AGG	+	chr8_4:30494415-30494434	Msa1322940:CDS	45.0%
	CTGTTCAGGAACATCAGGAA+TGG	-	chr8_4:30494501-30494520	None:intergenic	45.0%
	CATTCCTGATGTTCCTGAAC+AGG	+	chr8_4:30494499-30494518	Msa1322940:CDS	45.0%
	TCTTCCTGTTCAGGAACATC+AGG	-	chr8_4:30494506-30494525	None:intergenic	45.0%
	ATTGGGGACAGCAATAACTC+TGG	+	chr8_4:30494551-30494570	Msa1322940:CDS	45.0%
	GCTACCACTTCTTCCGAAAA+TGG	-	chr8_4:30494581-30494600	None:intergenic	45.0%
	TCGGAAGAAGTGGTAGCAAA+TGG	+	chr8_4:30494584-30494603	Msa1322940:CDS	45.0%
!	GAAACCATCAGAGAAGGTGT+TGG	+	chr8_4:30494905-30494924	Msa1322940:CDS	45.0%
	AACTCCAACACCTTCTCTGA+TGG	-	chr8_4:30494912-30494931	None:intergenic	45.0%
	TCTGCTGTCATTCATCAGAC+AGG	-	chr8_4:30495043-30495062	None:intergenic	45.0%
	GAATCAGCTGGCTGCAATGA+TGG	+	chr8_4:30493202-30493221	Msa1322940:five_prime_UTR	50.0%
	CTGACAAGTCGTTATCCCTG+TGG	+	chr8_4:30493350-30493369	Msa1322940:five_prime_UTR	50.0%
	ACCACTCAAGACATCCCACA+GGG	-	chr8_4:30493368-30493387	None:intergenic	50.0%
	TACCACTCAAGACATCCCAC+AGG	-	chr8_4:30493369-30493388	None:intergenic	50.0%
	GGATGAAGACGAGCTAGCAA+AGG	-	chr8_4:30493424-30493443	None:intergenic	50.0%
	TTGCTAGCTCGTCTTCATCC+GGG	+	chr8_4:30493424-30493443	Msa1322940:five_prime_UTR	50.0%
!	AGAGATGATTTGGAGGACCC+CGG	-	chr8_4:30493445-30493464	None:intergenic	50.0%
	TTGTTGCGTGAGACAGGGTT+TGG	-	chr8_4:30493568-30493587	None:intergenic	50.0%
	AAACCCTGTCTCACGCAACA+AGG	+	chr8_4:30493567-30493586	Msa1322940:CDS	50.0%
	AACCCTGTCTCACGCAACAA+GGG	+	chr8_4:30493568-30493587	Msa1322940:CDS	50.0%
	AACCCTTGTTGCGTGAGACA+GGG	-	chr8_4:30493573-30493592	None:intergenic	50.0%
!	TCACGCAACAAGGGTTCTGA+TGG	+	chr8_4:30493577-30493596	Msa1322940:CDS	50.0%
	ACATGCAGCAGTAGGTGTGA+AGG	-	chr8_4:30493611-30493630	None:intergenic	50.0%
	AGTAAAGATGGTGAGGTGCG+TGG	+	chr8_4:30493694-30493713	Msa1322940:CDS	50.0%
	CGTGGCATGGTTTCTATCTC+TGG	+	chr8_4:30493712-30493731	Msa1322940:CDS	50.0%
	GGCATGGTTTCTATCTCTGG+TGG	+	chr8_4:30493715-30493734	Msa1322940:CDS	50.0%
	CTCTCCATCACCACTGAAAC+AGG	-	chr8_4:30493986-30494005	None:intergenic	50.0%
!!	GTTTCAGTGGTGATGGAGAG+TGG	+	chr8_4:30493986-30494005	Msa1322940:CDS	50.0%
!!	GTTGGTGGTTCTGCTAGCAA+AGG	+	chr8_4:30494012-30494031	Msa1322940:CDS	50.0%
	ACATCAGGAATGGGAGACAC+TGG	-	chr8_4:30494491-30494510	None:intergenic	50.0%
!	CTTCAAGTGGACTTGAGGCA+TGG	-	chr8_4:30494622-30494641	None:intergenic	50.0%
	CATGCCTCAAGTCCACTTGA+AGG	+	chr8_4:30494620-30494639	Msa1322940:CDS	50.0%
	GGCGTGACATTACCTTCAAG+TGG	-	chr8_4:30494635-30494654	None:intergenic	50.0%
	AAGGCGGAAACCATCAGAGA+AGG	+	chr8_4:30494899-30494918	Msa1322940:CDS	50.0%
!!	AGAGAAGGTGTTGGAGTTGC+AGG	+	chr8_4:30494914-30494933	Msa1322940:CDS	50.0%
	GAATCAGCTGGCTGCAATGA+TGG	+	chr8_4:30493202-30493221	Msa1322940:five_prime_UTR	50.0%
	CTGACAAGTCGTTATCCCTG+TGG	+	chr8_4:30493350-30493369	Msa1322940:five_prime_UTR	50.0%
	ACCACTCAAGACATCCCACA+GGG	-	chr8_4:30493368-30493387	None:intergenic	50.0%
	TACCACTCAAGACATCCCAC+AGG	-	chr8_4:30493369-30493388	None:intergenic	50.0%
	GGATGAAGACGAGCTAGCAA+AGG	-	chr8_4:30493424-30493443	None:intergenic	50.0%
	TTGCTAGCTCGTCTTCATCC+GGG	+	chr8_4:30493424-30493443	Msa1322940:five_prime_UTR	50.0%
!	AGAGATGATTTGGAGGACCC+CGG	-	chr8_4:30493445-30493464	None:intergenic	50.0%
	TTGTTGCGTGAGACAGGGTT+TGG	-	chr8_4:30493568-30493587	None:intergenic	50.0%
	AAACCCTGTCTCACGCAACA+AGG	+	chr8_4:30493567-30493586	Msa1322940:CDS	50.0%
	AACCCTGTCTCACGCAACAA+GGG	+	chr8_4:30493568-30493587	Msa1322940:CDS	50.0%
	AACCCTTGTTGCGTGAGACA+GGG	-	chr8_4:30493573-30493592	None:intergenic	50.0%
!	TCACGCAACAAGGGTTCTGA+TGG	+	chr8_4:30493577-30493596	Msa1322940:CDS	50.0%
	ACATGCAGCAGTAGGTGTGA+AGG	-	chr8_4:30493611-30493630	None:intergenic	50.0%
	AGTAAAGATGGTGAGGTGCG+TGG	+	chr8_4:30493694-30493713	Msa1322940:CDS	50.0%
	CGTGGCATGGTTTCTATCTC+TGG	+	chr8_4:30493712-30493731	Msa1322940:CDS	50.0%
	GGCATGGTTTCTATCTCTGG+TGG	+	chr8_4:30493715-30493734	Msa1322940:CDS	50.0%
	CTCTCCATCACCACTGAAAC+AGG	-	chr8_4:30493986-30494005	None:intergenic	50.0%
!!	GTTTCAGTGGTGATGGAGAG+TGG	+	chr8_4:30493986-30494005	Msa1322940:CDS	50.0%
!!	GTTGGTGGTTCTGCTAGCAA+AGG	+	chr8_4:30494012-30494031	Msa1322940:CDS	50.0%
	ACATCAGGAATGGGAGACAC+TGG	-	chr8_4:30494491-30494510	None:intergenic	50.0%
!	CTTCAAGTGGACTTGAGGCA+TGG	-	chr8_4:30494622-30494641	None:intergenic	50.0%
	CATGCCTCAAGTCCACTTGA+AGG	+	chr8_4:30494620-30494639	Msa1322940:CDS	50.0%
	GGCGTGACATTACCTTCAAG+TGG	-	chr8_4:30494635-30494654	None:intergenic	50.0%
	AAGGCGGAAACCATCAGAGA+AGG	+	chr8_4:30494899-30494918	Msa1322940:CDS	50.0%
!!	AGAGAAGGTGTTGGAGTTGC+AGG	+	chr8_4:30494914-30494933	Msa1322940:CDS	50.0%
	TCCCTGTGGGATGTCTTGAG+TGG	+	chr8_4:30493364-30493383	Msa1322940:five_prime_UTR	55.0%
	TGCTAGCTCGTCTTCATCCG+GGG	+	chr8_4:30493425-30493444	Msa1322940:five_prime_UTR	55.0%
!	GAGACAGGGTTTGGTCCACT+TGG	-	chr8_4:30493559-30493578	None:intergenic	55.0%
	GAACCCTTGTTGCGTGAGAC+AGG	-	chr8_4:30493574-30493593	None:intergenic	55.0%
	TGCAGCAGTAGGTGTGAAGG+AGG	-	chr8_4:30493608-30493627	None:intergenic	55.0%
!!	TGGAAGGCACCCTGTTTCAG+TGG	+	chr8_4:30493973-30493992	Msa1322940:CDS	55.0%
	GCACCCTGTTTCAGTGGTGA+TGG	+	chr8_4:30493979-30493998	Msa1322940:CDS	55.0%
!!	GGTGATGGAGAGTGGGTTGT+TGG	+	chr8_4:30493994-30494013	Msa1322940:CDS	55.0%
!!	GATGGAGAGTGGGTTGTTGG+TGG	+	chr8_4:30493997-30494016	Msa1322940:CDS	55.0%
	CAGCGACTCTGATATGTCCG+AGG	+	chr8_4:30494448-30494467	Msa1322940:CDS	55.0%
	TCCCTGTGGGATGTCTTGAG+TGG	+	chr8_4:30493364-30493383	Msa1322940:five_prime_UTR	55.0%
	TGCTAGCTCGTCTTCATCCG+GGG	+	chr8_4:30493425-30493444	Msa1322940:five_prime_UTR	55.0%
!	GAGACAGGGTTTGGTCCACT+TGG	-	chr8_4:30493559-30493578	None:intergenic	55.0%
	GAACCCTTGTTGCGTGAGAC+AGG	-	chr8_4:30493574-30493593	None:intergenic	55.0%
	TGCAGCAGTAGGTGTGAAGG+AGG	-	chr8_4:30493608-30493627	None:intergenic	55.0%
!!	TGGAAGGCACCCTGTTTCAG+TGG	+	chr8_4:30493973-30493992	Msa1322940:CDS	55.0%
	GCACCCTGTTTCAGTGGTGA+TGG	+	chr8_4:30493979-30493998	Msa1322940:CDS	55.0%
!!	GGTGATGGAGAGTGGGTTGT+TGG	+	chr8_4:30493994-30494013	Msa1322940:CDS	55.0%
!!	GATGGAGAGTGGGTTGTTGG+TGG	+	chr8_4:30493997-30494016	Msa1322940:CDS	55.0%
	CAGCGACTCTGATATGTCCG+AGG	+	chr8_4:30494448-30494467	Msa1322940:CDS	55.0%
	AGATGGTGAGGTGCGTGGCA+TGG	+	chr8_4:30493699-30493718	Msa1322940:CDS	60.0%
	GGGCTTCCTTAGGCCCTTCA+AGG	-	chr8_4:30494086-30494105	None:intergenic	60.0%
	AGATGGTGAGGTGCGTGGCA+TGG	+	chr8_4:30493699-30493718	Msa1322940:CDS	60.0%
	GGGCTTCCTTAGGCCCTTCA+AGG	-	chr8_4:30494086-30494105	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_4	gene	30493146	30495316	30493146	ID=Msa1322940;Name=Msa1322940
chr8_4	mRNA	30493146	30495316	30493146	ID=Msa1322940-mRNA-1;Parent=Msa1322940;Name=Msa1322940-mRNA-1;_AED=0.02;_eAED=0.02;_QI=350\|1\|1\|1\|1\|1\|3\|261\|415
chr8_4	exon	30493146	30494296	30493146	ID=Msa1322940-mRNA-1:exon:10127;Parent=Msa1322940-mRNA-1
chr8_4	exon	30494380	30494641	30494380	ID=Msa1322940-mRNA-1:exon:10128;Parent=Msa1322940-mRNA-1
chr8_4	exon	30494871	30495316	30494871	ID=Msa1322940-mRNA-1:exon:10129;Parent=Msa1322940-mRNA-1
chr8_4	five_prime_UTR	30493146	30493495	30493146	ID=Msa1322940-mRNA-1:five_prime_utr;Parent=Msa1322940-mRNA-1
chr8_4	CDS	30493496	30494296	30493496	ID=Msa1322940-mRNA-1:cds;Parent=Msa1322940-mRNA-1
chr8_4	CDS	30494380	30494641	30494380	ID=Msa1322940-mRNA-1:cds;Parent=Msa1322940-mRNA-1
chr8_4	CDS	30494871	30495055	30494871	ID=Msa1322940-mRNA-1:cds;Parent=Msa1322940-mRNA-1
chr8_4	three_prime_UTR	30495056	30495316	30495056	ID=Msa1322940-mRNA-1:three_prime_utr;Parent=Msa1322940-mRNA-1

Gene Sequence

>Msa1322940

ATGATTGTTGACTTGAACACTGAAAATACAACTTATCTTCAAGTTTCTGTTTCTGACAAACCAAGTGGACCAAACCCTGTCTCACGCAACAAGGGTTCTGATGGAAGTACCTCCTTCACACCTACTGCTGCATGTTTTAGTAAGTATGGAAACCTGGTTTATGTGGGAAACTCGAAAGGTGAAATTCTTGTAATTGACAGTAAAGATGGTGAGGTGCGTGGCATGGTTTCTATCTCTGGTGGTTCAGTAGTGAAGAACATTGTATTCAGCAGGAATGGACAGTATCTTCTAACAAACTCAAATGATCGAGTAATCAGAATCTATGAAAATCTTCTTCCACCAAAAGATGAAGTTAGAGCATTAGCTGAATTGAACGAGAACCTCGGTGATCTAAATGGTGTTGAGAAGTTGAAGGCTGTAGGATCAAAATGTTTAACTCTGTTCCGTGAGTTTCAAGATGCAATCACGAAAGTGCACTGGAAGGCACCCTGTTTCAGTGGTGATGGAGAGTGGGTTGTTGGTGGTTCTGCTAGCAAAGGAGAGCACAAGATTTACATATGGGATAGAGCTGGACATCTTGTGAAAATCCTTGAAGGGCCTAAGGAAGCCCTTATTGATTTAGCGTGGCATCCTGTACGTCCAATTGTTGTGTCTGTTTCTTTGTGTGGCATAGTTTATATCTGGGCCAAAGAGTACATAGAGAACTGGAGTGCTTTTGCTCCTGATTTCAAAGAGATTGAGGAAAATGAGGAGTATGTGGAGCGAGAAGATGAATTTGATTTGAATCCTGACACTGATAATGTAAAAGGATCTGATGTCAATGAAGATGAGGACGTTGACATTGTGACAGTCGAGAAGGATCCTAATTTCAGCGACTCTGATATGTCCGAGGAAGAGCTACGTTATCTACCAGTGTCTCCCATTCCTGATGTTCCTGAACAGGAAGATAGGCTTTTAGATAGTTCTTCGAAGATTGGGGACAGCAATAACTCTGGATCACCATTTTCGGAAGAAGTGGTAGCAAATGGACACATGATGAGCCATGCCTCAAGTCCACTTGAAGATGATGCTGTGGGAACAAGAATTAAAAGAAGGCGGAAACCATCAGAGAAGGTGTTGGAGTTGCAGGCTGAAAGAGTCAATAAAACCTCAAACTCTAGCAAACCATCAAGAACCAAAACTAAATCTTTTGTTGATGAGAGCAATGGTAATGATTTTTATTATGATGATGACCTGTCTGATGAATGA

Protein sequence

>Msa1322940

MIVDLNTENTTYLQVSVSDKPSGPNPVSRNKGSDGSTSFTPTAACFSKYGNLVYVGNSKGEILVIDSKDGEVRGMVSISGGSVVKNIVFSRNGQYLLTNSNDRVIRIYENLLPPKDEVRALAELNENLGDLNGVEKLKAVGSKCLTLFREFQDAITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSLCGIVYIWAKEYIENWSAFAPDFKEIEENEEYVEREDEFDLNPDTDNVKGSDVNEDEDVDIVTVEKDPNFSDSDMSEEELRYLPVSPIPDVPEQEDRLLDSSSKIGDSNNSGSPFSEEVVANGHMMSHASSPLEDDAVGTRIKRRRKPSEKVLELQAERVNKTSNSSKPSRTKTKSFVDESNGNDFYYDDDLSDE*