Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417420 | sp|Q9LEU8|ARLY_ARATH | 75.854 | 410 | 99 | 0 | 1 | 410 | 105 | 514 | 0.0 | 678 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417420 | G7J530 | 99.270 | 411 | 3 | 0 | 1 | 411 | 107 | 517 | 0.0 | 846 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001780 | Msa1417420 | 0.820133 | 8.056235e-53 | -8.615850e-47 |
| Msa0003700 | Msa1417420 | 0.837153 | 6.146826e-57 | -8.615850e-47 |
| Msa0007480 | Msa1417420 | 0.803981 | 2.689629e-49 | -8.615850e-47 |
| Msa0017510 | Msa1417420 | 0.840068 | 1.086237e-57 | -8.615850e-47 |
| Msa0027230 | Msa1417420 | 0.809520 | 1.816585e-50 | -8.615850e-47 |
| Msa0028420 | Msa1417420 | 0.819828 | 9.459345e-53 | -8.615850e-47 |
| Msa0028640 | Msa1417420 | 0.809007 | 2.341110e-50 | -8.615850e-47 |
| Msa0029270 | Msa1417420 | 0.816771 | 4.657093e-52 | -8.615850e-47 |
| Msa0031340 | Msa1417420 | 0.803996 | 2.670240e-49 | -8.615850e-47 |
| Msa0032430 | Msa1417420 | 0.824770 | 6.741839e-54 | -8.615850e-47 |
| Msa0047030 | Msa1417420 | 0.801828 | 7.488511e-49 | -8.615850e-47 |
| Msa0047070 | Msa1417420 | 0.819540 | 1.100613e-52 | -8.615850e-47 |
| Msa0063890 | Msa1417420 | 0.809340 | 1.986396e-50 | -8.615850e-47 |
| Msa0075220 | Msa1417420 | 0.803087 | 4.120049e-49 | -8.615850e-47 |
| Msa0089630 | Msa1417420 | 0.802987 | 4.320834e-49 | -8.615850e-47 |
| Msa0094120 | Msa1417420 | 0.824766 | 6.755751e-54 | -8.615850e-47 |
| Msa0094140 | Msa1417420 | 0.808769 | 2.631681e-50 | -8.615850e-47 |
| Msa0101440 | Msa1417420 | 0.809688 | 1.671692e-50 | -8.615850e-47 |
| Msa0110970 | Msa1417420 | 0.846801 | 1.728750e-59 | -8.615850e-47 |
| Msa1346370 | Msa1417420 | 0.806737 | 7.112704e-50 | -8.615850e-47 |
| Msa1365060 | Msa1417420 | 0.826733 | 2.307261e-54 | -8.615850e-47 |
| Msa1367370 | Msa1417420 | 0.853987 | 1.661271e-61 | -8.615850e-47 |
| Msa1369550 | Msa1417420 | 0.818522 | 1.875738e-52 | -8.615850e-47 |
| Msa1373650 | Msa1417420 | 0.803161 | 3.978687e-49 | -8.615850e-47 |
| Msa1374040 | Msa1417420 | 0.844063 | 9.533919e-59 | -8.615850e-47 |
| Msa1374550 | Msa1417420 | 0.804204 | 2.416401e-49 | -8.615850e-47 |
| Msa1375560 | Msa1417420 | 0.808160 | 3.550305e-50 | -8.615850e-47 |
| Msa1382540 | Msa1417420 | 0.816545 | 5.233222e-52 | -8.615850e-47 |
| Msa1387870 | Msa1417420 | 0.805288 | 1.435110e-49 | -8.615850e-47 |
| Msa1391770 | Msa1417420 | 0.811229 | 7.772477e-51 | -8.615850e-47 |
| Msa1399550 | Msa1417420 | 0.827155 | 1.829164e-54 | -8.615850e-47 |
| Msa1409870 | Msa1417420 | 0.802210 | 6.251546e-49 | -8.615850e-47 |
| Msa1417420 | Msa1417870 | 0.816116 | 6.527065e-52 | -8.615850e-47 |
| Msa1417420 | Msa1418090 | 0.800690 | 1.280139e-48 | -8.615850e-47 |
| Msa1417420 | Msa1419370 | 0.812877 | 3.397618e-51 | -8.615850e-47 |
| Msa1417420 | Msa1423350 | 0.813628 | 2.324556e-51 | -8.615850e-47 |
| Msa1417420 | Msa1443110 | 0.854206 | 1.436243e-61 | -8.615850e-47 |
| Msa1417420 | Msa1446950 | 0.814132 | 1.800132e-51 | -8.615850e-47 |
| Msa1417420 | Msa1459380 | 0.809293 | 2.032245e-50 | -8.615850e-47 |
| Msa1417420 | Msa1460020 | 0.806350 | 8.586178e-50 | -8.615850e-47 |
| Msa1417420 | Msa1461300 | 0.806371 | 8.496791e-50 | -8.615850e-47 |
| Msa1417420 | Msa1464640 | 0.819085 | 1.397366e-52 | -8.615850e-47 |
| Msa1417420 | Msa1464810 | 0.808968 | 2.386017e-50 | -8.615850e-47 |
| Msa1417420 | Msa1465310 | 0.809371 | 1.955641e-50 | -8.615850e-47 |
| Msa0608320 | Msa1417420 | 0.840497 | 8.389950e-58 | -8.615850e-47 |
| Msa0615710 | Msa1417420 | 0.840772 | 7.109815e-58 | -8.615850e-47 |
| Msa0616160 | Msa1417420 | 0.805492 | 1.300534e-49 | -8.615850e-47 |
| Msa0616220 | Msa1417420 | 0.832090 | 1.152742e-55 | -8.615850e-47 |
| Msa0623790 | Msa1417420 | 0.800564 | 1.358420e-48 | -8.615850e-47 |
| Msa0625720 | Msa1417420 | 0.814768 | 1.302181e-51 | -8.615850e-47 |
| Msa0643560 | Msa1417420 | 0.810401 | 1.173797e-50 | -8.615850e-47 |
| Msa0643570 | Msa1417420 | 0.821629 | 3.647429e-53 | -8.615850e-47 |
| Msa0643890 | Msa1417420 | 0.800992 | 1.110970e-48 | -8.615850e-47 |
| Msa0658240 | Msa1417420 | 0.820972 | 5.170705e-53 | -8.615850e-47 |
| Msa0663390 | Msa1417420 | 0.818209 | 2.209046e-52 | -8.615850e-47 |
| Msa0669320 | Msa1417420 | 0.800877 | 1.172837e-48 | -8.615850e-47 |
| Msa0683510 | Msa1417420 | 0.801440 | 8.994054e-49 | -8.615850e-47 |
| Msa0683570 | Msa1417420 | 0.805275 | 1.444217e-49 | -8.615850e-47 |
| Msa0689520 | Msa1417420 | 0.804426 | 2.172131e-49 | -8.615850e-47 |
| Msa0692950 | Msa1417420 | 0.804855 | 1.767757e-49 | -8.615850e-47 |
| Msa0699550 | Msa1417420 | 0.820433 | 6.877493e-53 | -8.615850e-47 |
| Msa0703050 | Msa1417420 | 0.830220 | 3.319654e-55 | -8.615850e-47 |
| Msa0708520 | Msa1417420 | 0.818253 | 2.158382e-52 | -8.615850e-47 |
| Msa0754520 | Msa1417420 | 0.808856 | 2.521952e-50 | -8.615850e-47 |
| Msa0760380 | Msa1417420 | 0.806453 | 8.166639e-50 | -8.615850e-47 |
| Msa0770720 | Msa1417420 | 0.837346 | 5.489154e-57 | -8.615850e-47 |
| Msa0796530 | Msa1417420 | 0.814244 | 1.700318e-51 | -8.615850e-47 |
| Msa0806790 | Msa1417420 | 0.804148 | 2.482290e-49 | -8.615850e-47 |
| Msa0813740 | Msa1417420 | 0.800519 | 1.387559e-48 | -8.615850e-47 |
| Msa0828560 | Msa1417420 | 0.824455 | 7.998007e-54 | -8.615850e-47 |
| Msa0833220 | Msa1417420 | 0.805436 | 1.336043e-49 | -8.615850e-47 |
| Msa0834770 | Msa1417420 | 0.802835 | 4.645586e-49 | -8.615850e-47 |
| Msa0838580 | Msa1417420 | 0.813738 | 2.199249e-51 | -8.615850e-47 |
| Msa0122970 | Msa1417420 | 0.800473 | 1.417869e-48 | -8.615850e-47 |
| Msa0124060 | Msa1417420 | 0.856198 | 3.783266e-62 | -8.615850e-47 |
| Msa0127050 | Msa1417420 | 0.812212 | 4.750465e-51 | -8.615850e-47 |
| Msa0140570 | Msa1417420 | 0.816724 | 4.770271e-52 | -8.615850e-47 |
| Msa0145440 | Msa1417420 | 0.808296 | 3.320350e-50 | -8.615850e-47 |
| Msa0146260 | Msa1417420 | 0.840360 | 9.112947e-58 | -8.615850e-47 |
| Msa0157290 | Msa1417420 | 0.840469 | 8.536182e-58 | -8.615850e-47 |
| Msa0160550 | Msa1417420 | 0.808174 | 3.526098e-50 | -8.615850e-47 |
| Msa0168500 | Msa1417420 | 0.859528 | 3.886364e-63 | -8.615850e-47 |
| Msa0169310 | Msa1417420 | 0.810796 | 9.645462e-51 | -8.615850e-47 |
| Msa0171290 | Msa1417420 | 0.818995 | 1.465330e-52 | -8.615850e-47 |
| Msa0172070 | Msa1417420 | 0.822438 | 2.368646e-53 | -8.615850e-47 |
| Msa0193120 | Msa1417420 | 0.810677 | 1.023550e-50 | -8.615850e-47 |
| Msa0197420 | Msa1417420 | 0.800557 | 1.363002e-48 | -8.615850e-47 |
| Msa0211150 | Msa1417420 | 0.826727 | 2.315155e-54 | -8.615850e-47 |
| Msa0225680 | Msa1417420 | 0.815599 | 8.511761e-52 | -8.615850e-47 |
| Msa0225740 | Msa1417420 | 0.826236 | 3.030582e-54 | -8.615850e-47 |
| Msa0225760 | Msa1417420 | 0.807579 | 4.718867e-50 | -8.615850e-47 |
| Msa0229230 | Msa1417420 | 0.803706 | 3.067083e-49 | -8.615850e-47 |
| Msa0234600 | Msa1417420 | 0.837550 | 4.864801e-57 | -8.615850e-47 |
| Msa1225700 | Msa1417420 | 0.869096 | 3.999605e-66 | -8.615850e-47 |
| Msa1229500 | Msa1417420 | 0.832564 | 8.798732e-56 | -8.615850e-47 |
| Msa1242220 | Msa1417420 | 0.800104 | 1.685091e-48 | -8.615850e-47 |
| Msa1242230 | Msa1417420 | 0.816783 | 4.627826e-52 | -8.615850e-47 |
| Msa1242240 | Msa1417420 | 0.823427 | 1.393160e-53 | -8.615850e-47 |
| Msa1252190 | Msa1417420 | 0.813810 | 2.120355e-51 | -8.615850e-47 |
| Msa1261010 | Msa1417420 | 0.800984 | 1.114927e-48 | -8.615850e-47 |
| Msa1269480 | Msa1417420 | 0.801939 | 7.106089e-49 | -8.615850e-47 |
| Msa1270610 | Msa1417420 | 0.825016 | 5.897944e-54 | -8.615850e-47 |
| Msa1271990 | Msa1417420 | 0.845082 | 5.069008e-59 | -8.615850e-47 |
| Msa1272900 | Msa1417420 | 0.813798 | 2.132872e-51 | -8.615850e-47 |
| Msa1279380 | Msa1417420 | 0.816658 | 4.937491e-52 | -8.615850e-47 |
| Msa1283840 | Msa1417420 | 0.832861 | 7.421992e-56 | -8.615850e-47 |
| Msa1283860 | Msa1417420 | 0.814441 | 1.538512e-51 | -8.615850e-47 |
| Msa1283910 | Msa1417420 | 0.800072 | 1.710900e-48 | -8.615850e-47 |
| Msa1284260 | Msa1417420 | 0.831044 | 2.086513e-55 | -8.615850e-47 |
| Msa1292830 | Msa1417420 | 0.809962 | 1.459994e-50 | -8.615850e-47 |
| Msa1298820 | Msa1417420 | 0.828149 | 1.055244e-54 | -8.615850e-47 |
| Msa1300490 | Msa1417420 | 0.809336 | 1.990106e-50 | -8.615850e-47 |
| Msa1309790 | Msa1417420 | 0.816562 | 5.188101e-52 | -8.615850e-47 |
| Msa1322860 | Msa1417420 | 0.830685 | 2.555467e-55 | -8.615850e-47 |
| Msa1322890 | Msa1417420 | 0.800553 | 1.365363e-48 | -8.615850e-47 |
| Msa1327050 | Msa1417420 | 0.823656 | 1.231894e-53 | -8.615850e-47 |
| Msa1328710 | Msa1417420 | 0.801695 | 7.976228e-49 | -8.615850e-47 |
| Msa1330410 | Msa1417420 | 0.821660 | 3.588013e-53 | -8.615850e-47 |
| Msa1336110 | Msa1417420 | 0.821123 | 4.772469e-53 | -8.615850e-47 |
| Msa1343070 | Msa1417420 | 0.803161 | 3.979007e-49 | -8.615850e-47 |
| Msa0376350 | Msa1417420 | 0.823335 | 1.464263e-53 | -8.615850e-47 |
| Msa0379770 | Msa1417420 | 0.867833 | 1.022713e-65 | -8.615850e-47 |
| Msa0380210 | Msa1417420 | 0.805671 | 1.192867e-49 | -8.615850e-47 |
| Msa0381550 | Msa1417420 | 0.804573 | 2.024691e-49 | -8.615850e-47 |
| Msa0386850 | Msa1417420 | 0.802979 | 4.337428e-49 | -8.615850e-47 |
| Msa0391320 | Msa1417420 | 0.808437 | 3.099163e-50 | -8.615850e-47 |
| Msa0392510 | Msa1417420 | 0.803124 | 4.049073e-49 | -8.615850e-47 |
| Msa0393080 | Msa1417420 | 0.800785 | 1.224297e-48 | -8.615850e-47 |
| Msa0402650 | Msa1417420 | 0.823875 | 1.094387e-53 | -8.615850e-47 |
| Msa0410500 | Msa1417420 | 0.830870 | 2.301768e-55 | -8.615850e-47 |
| Msa0410650 | Msa1417420 | 0.804350 | 2.253695e-49 | -8.615850e-47 |
| Msa0417270 | Msa1417420 | 0.813765 | 2.168402e-51 | -8.615850e-47 |
| Msa0417880 | Msa1417420 | 0.822748 | 2.006713e-53 | -8.615850e-47 |
| Msa0424790 | Msa1417420 | 0.813792 | 2.139510e-51 | -8.615850e-47 |
| Msa0428150 | Msa1417420 | 0.828894 | 6.974977e-55 | -8.615850e-47 |
| Msa0428590 | Msa1417420 | 0.803895 | 2.801816e-49 | -8.615850e-47 |
| Msa0442830 | Msa1417420 | 0.824606 | 7.371001e-54 | -8.615850e-47 |
| Msa0449210 | Msa1417420 | 0.812534 | 4.040355e-51 | -8.615850e-47 |
| Msa0462500 | Msa1417420 | 0.822147 | 2.767324e-53 | -8.615850e-47 |
| Msa0467490 | Msa1417420 | 0.822821 | 1.929283e-53 | -8.615850e-47 |
| Msa0468290 | Msa1417420 | 0.802099 | 6.587968e-49 | -8.615850e-47 |
| Msa0469030 | Msa1417420 | 0.813530 | 2.443232e-51 | -8.615850e-47 |
| Msa0475790 | Msa1417420 | 0.808546 | 2.937079e-50 | -8.615850e-47 |
| Msa0481530 | Msa1417420 | 0.810615 | 1.055273e-50 | -8.615850e-47 |
| Msa0981060 | Msa1417420 | 0.807240 | 5.566444e-50 | -8.615850e-47 |
| Msa1018690 | Msa1417420 | 0.805859 | 1.089243e-49 | -8.615850e-47 |
| Msa1020670 | Msa1417420 | 0.837694 | 4.468911e-57 | -8.615850e-47 |
| Msa1029250 | Msa1417420 | 0.821175 | 4.642717e-53 | -8.615850e-47 |
| Msa1045140 | Msa1417420 | 0.813344 | 2.684559e-51 | -8.615850e-47 |
| Msa1051830 | Msa1417420 | 0.843148 | 1.674211e-58 | -8.615850e-47 |
| Msa1074810 | Msa1417420 | 0.803238 | 3.835660e-49 | -8.615850e-47 |
| Msa1079740 | Msa1417420 | 0.810936 | 8.996546e-51 | -8.615850e-47 |
| Msa1084960 | Msa1417420 | 0.805044 | 1.614468e-49 | -8.615850e-47 |
| Msa1085200 | Msa1417420 | 0.802186 | 6.322303e-49 | -8.615850e-47 |
| Msa1096970 | Msa1417420 | 0.821786 | 3.354501e-53 | -8.615850e-47 |
| Msa1106700 | Msa1417420 | 0.830965 | 2.182178e-55 | -8.615850e-47 |
| Msa0239190 | Msa1417420 | 0.807771 | 4.295952e-50 | -8.615850e-47 |
| Msa0243100 | Msa1417420 | 0.818044 | 2.406670e-52 | -8.615850e-47 |
| Msa0244860 | Msa1417420 | 0.802959 | 4.378928e-49 | -8.615850e-47 |
| Msa0255090 | Msa1417420 | 0.823134 | 1.631040e-53 | -8.615850e-47 |
| Msa0259380 | Msa1417420 | 0.829682 | 4.489604e-55 | -8.615850e-47 |
| Msa0260610 | Msa1417420 | 0.817486 | 3.217227e-52 | -8.615850e-47 |
| Msa0260670 | Msa1417420 | 0.813672 | 2.273590e-51 | -8.615850e-47 |
| Msa0261340 | Msa1417420 | 0.802568 | 5.274448e-49 | -8.615850e-47 |
| Msa0262340 | Msa1417420 | 0.801348 | 9.392700e-49 | -8.615850e-47 |
| Msa0264040 | Msa1417420 | 0.810806 | 9.599281e-51 | -8.615850e-47 |
| Msa0283520 | Msa1417420 | 0.809933 | 1.480775e-50 | -8.615850e-47 |
| Msa0284410 | Msa1417420 | 0.814832 | 1.260136e-51 | -8.615850e-47 |
| Msa0287650 | Msa1417420 | 0.813573 | 2.389881e-51 | -8.615850e-47 |
| Msa0291540 | Msa1417420 | 0.810023 | 1.416624e-50 | -8.615850e-47 |
| Msa0292330 | Msa1417420 | 0.816059 | 6.722022e-52 | -8.615850e-47 |
| Msa0292400 | Msa1417420 | 0.854291 | 1.357570e-61 | -8.615850e-47 |
| Msa0294160 | Msa1417420 | 0.804107 | 2.531865e-49 | -8.615850e-47 |
| Msa0302000 | Msa1417420 | 0.802675 | 5.011945e-49 | -8.615850e-47 |
| Msa0309770 | Msa1417420 | 0.804710 | 1.895721e-49 | -8.615850e-47 |
| Msa0313410 | Msa1417420 | 0.817527 | 3.148223e-52 | -8.615850e-47 |
| Msa0316810 | Msa1417420 | 0.809859 | 1.536230e-50 | -8.615850e-47 |
| Msa0318700 | Msa1417420 | 0.801984 | 6.955264e-49 | -8.615850e-47 |
| Msa0332000 | Msa1417420 | 0.807442 | 5.044927e-50 | -8.615850e-47 |
| Msa0334220 | Msa1417420 | 0.803994 | 2.671851e-49 | -8.615850e-47 |
| Msa0339320 | Msa1417420 | 0.805908 | 1.063784e-49 | -8.615850e-47 |
| Msa0339480 | Msa1417420 | 0.803210 | 3.885947e-49 | -8.615850e-47 |
| Msa0341050 | Msa1417420 | 0.804912 | 1.719868e-49 | -8.615850e-47 |
| Msa0341330 | Msa1417420 | 0.808356 | 3.223961e-50 | -8.615850e-47 |
| Msa0363070 | Msa1417420 | 0.844599 | 6.840775e-59 | -8.615850e-47 |
| Msa0363200 | Msa1417420 | 0.823279 | 1.508902e-53 | -8.615850e-47 |
| Msa1108160 | Msa1417420 | 0.821995 | 3.001802e-53 | -8.615850e-47 |
| Msa1111110 | Msa1417420 | 0.808758 | 2.646441e-50 | -8.615850e-47 |
| Msa1111130 | Msa1417420 | 0.819279 | 1.262633e-52 | -8.615850e-47 |
| Msa1121440 | Msa1417420 | 0.800622 | 1.322019e-48 | -8.615850e-47 |
| Msa1140210 | Msa1417420 | 0.817583 | 3.057969e-52 | -8.615850e-47 |
| Msa1147900 | Msa1417420 | 0.807131 | 5.870169e-50 | -8.615850e-47 |
| Msa1151910 | Msa1417420 | 0.804676 | 1.926961e-49 | -8.615850e-47 |
| Msa1154710 | Msa1417420 | 0.804555 | 2.042522e-49 | -8.615850e-47 |
| Msa1171710 | Msa1417420 | 0.803948 | 2.732117e-49 | -8.615850e-47 |
| Msa1183120 | Msa1417420 | 0.843877 | 1.069445e-58 | -8.615850e-47 |
| Msa1209460 | Msa1417420 | 0.858714 | 6.815768e-63 | -8.615850e-47 |
| Msa0490390 | Msa1417420 | 0.812295 | 4.555413e-51 | -8.615850e-47 |
| Msa0497490 | Msa1417420 | 0.803707 | 3.065600e-49 | -8.615850e-47 |
| Msa0498060 | Msa1417420 | 0.822908 | 1.841487e-53 | -8.615850e-47 |
| Msa0501460 | Msa1417420 | 0.806170 | 9.369999e-50 | -8.615850e-47 |
| Msa0507680 | Msa1417420 | 0.823126 | 1.638445e-53 | -8.615850e-47 |
| Msa0516170 | Msa1417420 | 0.805364 | 1.383735e-49 | -8.615850e-47 |
| Msa0520070 | Msa1417420 | 0.820177 | 7.870375e-53 | -8.615850e-47 |
| Msa0524190 | Msa1417420 | 0.850755 | 1.382950e-60 | -8.615850e-47 |
| Msa0529890 | Msa1417420 | 0.810214 | 1.288529e-50 | -8.615850e-47 |
| Msa0532070 | Msa1417420 | 0.839373 | 1.647686e-57 | -8.615850e-47 |
| Msa0546680 | Msa1417420 | 0.801471 | 8.865366e-49 | -8.615850e-47 |
| Msa0557070 | Msa1417420 | 0.806471 | 8.096690e-50 | -8.615850e-47 |
| Msa0569200 | Msa1417420 | 0.805750 | 1.148320e-49 | -8.615850e-47 |
| Msa0576880 | Msa1417420 | 0.836766 | 7.721747e-57 | -8.615850e-47 |
| Msa0585300 | Msa1417420 | 0.808267 | 3.368186e-50 | -8.615850e-47 |
| Msa0585560 | Msa1417420 | 0.813371 | 2.647636e-51 | -8.615850e-47 |
| Msa0602310 | Msa1417420 | 0.816770 | 4.658411e-52 | -8.615850e-47 |
| Msa0602460 | Msa1417420 | 0.814262 | 1.685115e-51 | -8.615850e-47 |
| Msa0866270 | Msa1417420 | 0.800644 | 1.308598e-48 | -8.615850e-47 |
| Msa0869780 | Msa1417420 | 0.811112 | 8.237654e-51 | -8.615850e-47 |
| Msa0873220 | Msa1417420 | 0.825434 | 4.697128e-54 | -8.615850e-47 |
| Msa0876190 | Msa1417420 | 0.804512 | 2.084470e-49 | -8.615850e-47 |
| Msa0878500 | Msa1417420 | 0.819856 | 9.324891e-53 | -8.615850e-47 |
| Msa0880140 | Msa1417420 | 0.836224 | 1.060805e-56 | -8.615850e-47 |
| Msa0906610 | Msa1417420 | 0.809039 | 2.304491e-50 | -8.615850e-47 |
| Msa0909230 | Msa1417420 | 0.826056 | 3.345243e-54 | -8.615850e-47 |
| Msa0919770 | Msa1417420 | 0.830807 | 2.385357e-55 | -8.615850e-47 |
| Msa0925180 | Msa1417420 | 0.801242 | 9.874031e-49 | -8.615850e-47 |
| Msa0938480 | Msa1417420 | 0.851200 | 1.035997e-60 | -8.615850e-47 |
| Msa0944190 | Msa1417420 | 0.835886 | 1.292278e-56 | -8.615850e-47 |
| Msa0945110 | Msa1417420 | 0.845888 | 3.066414e-59 | -8.615850e-47 |
| Msa0945970 | Msa1417420 | 0.812318 | 4.502382e-51 | -8.615850e-47 |
| Msa0966400 | Msa1417420 | 0.807638 | 4.583148e-50 | -8.615850e-47 |
| Msa0975640 | Msa1417420 | 0.841722 | 4.000524e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417420 | MtrunA17_Chr3g0132881 | 99.029 | 412 | 3 | 1 | 1 | 411 | 107 | 518 | 0.0 | 841 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417420 | AT5G10920.1 | 75.854 | 410 | 99 | 0 | 1 | 410 | 105 | 514 | 0.0 | 678 |
Find 100 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACAGTGTTAGAACTATTT+TGG | 0.122795 | tig0024475:+1530 | Msa1417420:CDS |
| TCGAGAGTGGTGAGTTTAAT+TGG | 0.187249 | tig0024475:+135 | Msa1417420:CDS |
| AAACACAAGTTTATTATTTC+AGG | 0.200820 | tig0024475:-2519 | None:intergenic |
| ATCCAGAAATTTATTTCTTA+TGG | 0.205292 | tig0024475:+2389 | Msa1417420:CDS |
| AACCATAAGAAATAAATTTC+TGG | 0.214883 | tig0024475:-2391 | None:intergenic |
| CTGTGGGCTTCAGAGGAATT+TGG | 0.246553 | tig0024475:+1172 | Msa1417420:CDS |
| TTGCCGACCAACTCGATTAT+TGG | 0.269342 | tig0024475:+2432 | Msa1417420:CDS |
| GCTTGTGCGTTGGCTGGTAC+AGG | 0.319298 | tig0024475:+858 | Msa1417420:CDS |
| ATATCATGAGATGTTCTAAA+TGG | 0.325994 | tig0024475:-2236 | None:intergenic |
| GTTTGATCAGTGCGAGTGAT+AGG | 0.329792 | tig0024475:+72 | Msa1417420:CDS |
| GGATTCTATTATTGAAGGTT+TGG | 0.334686 | tig0024475:+94 | Msa1417420:CDS |
| GGTAAGTCTGCCAGAGTCAT+AGG | 0.335284 | tig0024475:+1280 | Msa1417420:CDS |
| AATCAGGGTCTTATTGTTCC+TGG | 0.340643 | tig0024475:+362 | Msa1417420:CDS |
| AACTTGATCATTTCTACTTC+TGG | 0.342542 | tig0024475:-243 | None:intergenic |
| AAGGATGTGTATGAATTTCT+TGG | 0.377849 | tig0024475:+2353 | Msa1417420:CDS |
| TAAGCTGGCTTTGAACAATC+AGG | 0.392509 | tig0024475:+346 | Msa1417420:CDS |
| CAATGAACATTACTTTCAAT+CGG | 0.395660 | tig0024475:+1580 | Msa1417420:CDS |
| TGCTTACAATCGTGATTTGC+AGG | 0.397013 | tig0024475:+1345 | Msa1417420:CDS |
| GATTCTATTATTGAAGGTTT+GGG | 0.400207 | tig0024475:+95 | Msa1417420:CDS |
| CTGTTGAAACAGAATCGCTT+GGG | 0.414810 | tig0024475:-1204 | None:intergenic |
| ATCATGTTGCATATTTGAAT+AGG | 0.416564 | tig0024475:+2549 | Msa1417420:three_prime_UTR |
| AAGAATACAAAAGGCTTTAC+CGG | 0.418379 | tig0024475:+1605 | Msa1417420:CDS |
| CGCTGATTATCTTGTTAAGA+AGG | 0.421388 | tig0024475:+1653 | Msa1417420:CDS |
| TTAGGGGCTTGTGCGTTGGC+TGG | 0.427204 | tig0024475:+852 | Msa1417420:CDS |
| AGAAGGTGCTGTAATAAAAC+AGG | 0.428088 | tig0024475:-410 | None:intergenic |
| TTACTGCTCCAATGAGGAAT+AGG | 0.432342 | tig0024475:+922 | Msa1417420:CDS |
| GCAAGAAGCTCACGACTTCA+AGG | 0.433294 | tig0024475:-2662 | None:intergenic |
| TTCTCGACTTGGTGAAGAAT+GGG | 0.446818 | tig0024475:+1147 | Msa1417420:CDS |
| TTTCTCGACTTGGTGAAGAA+TGG | 0.448284 | tig0024475:+1146 | Msa1417420:CDS |
| TCAACTTTCATTGCTTAAGC+TGG | 0.453847 | tig0024475:+331 | Msa1417420:CDS |
| AATGAACATTACTTTCAATC+GGG | 0.455024 | tig0024475:+1581 | Msa1417420:CDS |
| TATGAAATAAAGTATTTGGA+TGG | 0.455571 | tig0024475:+2740 | Msa1417420:three_prime_UTR |
| TTTATTTCTTATGGTTCCAC+CGG | 0.456153 | tig0024475:+2398 | Msa1417420:CDS |
| ATTCATGACATCGGATGCAT+TGG | 0.456659 | tig0024475:+896 | Msa1417420:CDS |
| TTGCAGATTGAGCGTGATGC+TGG | 0.458156 | tig0024475:+789 | Msa1417420:intron |
| CCAAGCGATTCTGTTTCAAC+AGG | 0.459444 | tig0024475:+1205 | Msa1417420:CDS |
| CGATGTCATGAATCGATCAA+TGG | 0.461237 | tig0024475:-886 | None:intergenic |
| ATCAAAGAATTGCCAACTGT+TGG | 0.463984 | tig0024475:+2286 | Msa1417420:CDS |
| GTAAGATACCTATTCCTCAT+TGG | 0.466006 | tig0024475:-930 | None:intergenic |
| CCTGTTGAAACAGAATCGCT+TGG | 0.466168 | tig0024475:-1205 | None:intergenic |
| TACACATCCTTGTCAAAGAC+TGG | 0.467066 | tig0024475:-2341 | None:intergenic |
| CTTGTGCGTTGGCTGGTACA+GGG | 0.468110 | tig0024475:+859 | Msa1417420:CDS |
| CGAACAAGTTCCATTGGATC+AGG | 0.470603 | tig0024475:-1256 | None:intergenic |
| TTTAGCCAAGGTTACTGAAT+GGG | 0.473778 | tig0024475:+2610 | Msa1417420:three_prime_UTR |
| GCTGCTCTTACTGATTTGAT+TGG | 0.475293 | tig0024475:+194 | Msa1417420:CDS |
| CAATCGGGAAAGAATACAAA+AGG | 0.481128 | tig0024475:+1596 | Msa1417420:CDS |
| TCCTTTAGGGGCTTGTGCGT+TGG | 0.482828 | tig0024475:+848 | Msa1417420:CDS |
| ATTTAGCCAAGGTTACTGAA+TGG | 0.483998 | tig0024475:+2609 | Msa1417420:three_prime_UTR |
| GAAGTATGTAACTTCTTAGC+AGG | 0.486485 | tig0024475:-221 | None:intergenic |
| AAGAGTATCCTAGTTGTCAC+TGG | 0.487293 | tig0024475:+2478 | Msa1417420:exon |
| GATAGGGATTCTATTATTGA+AGG | 0.491597 | tig0024475:+89 | Msa1417420:CDS |
| TTCTGACCGAGATTTCCTAC+TGG | 0.492656 | tig0024475:+1087 | Msa1417420:CDS |
| TTCATGACATCGGATGCATT+GGG | 0.494059 | tig0024475:+897 | Msa1417420:CDS |
| ATGAAATAAAGTATTTGGAT+GGG | 0.498066 | tig0024475:+2741 | Msa1417420:three_prime_UTR |
| TAATTGGAGAGCTGATAGAG+AGG | 0.498860 | tig0024475:+151 | Msa1417420:CDS |
| ATACAAAAGGCTTTACCGGC+TGG | 0.499237 | tig0024475:+1609 | Msa1417420:CDS |
| TCTGCTTGCTTATGTTGAAG+AGG | 0.512207 | tig0024475:+430 | Msa1417420:CDS |
| AGAACATCTCATGATATAGC+AGG | 0.515600 | tig0024475:+2242 | Msa1417420:CDS |
| GATGTCATGAATCGATCAAT+GGG | 0.518952 | tig0024475:-885 | None:intergenic |
| ATGGGTACTGTGGGCTTCAG+AGG | 0.519124 | tig0024475:+1165 | Msa1417420:CDS |
| CAGCTTCCCCAGTGACAACT+AGG | 0.524290 | tig0024475:-2486 | None:intergenic |
| GTAAGTCTGCCAGAGTCATA+GGG | 0.524586 | tig0024475:+1281 | Msa1417420:CDS |
| GTTTGATTGATTGTAGAGCT+AGG | 0.529508 | tig0024475:+814 | Msa1417420:CDS |
| GCAGTGCACCTTTCTCGACT+TGG | 0.530755 | tig0024475:+1136 | Msa1417420:CDS |
| TTGTTACTGATTTACGACTT+TGG | 0.532012 | tig0024475:+264 | Msa1417420:CDS |
| TTTGATCAGTGCGAGTGATA+GGG | 0.532025 | tig0024475:+73 | Msa1417420:CDS |
| GTCGGCAACACAAGCAGACC+CGG | 0.542747 | tig0024475:-2417 | None:intergenic |
| TTACCACGAACAAGTTCCAT+TGG | 0.545026 | tig0024475:-1262 | None:intergenic |
| ATTCTTCACCAAGTCGAGAA+AGG | 0.545808 | tig0024475:-1144 | None:intergenic |
| AACTACCCATTCAGTAACCT+TGG | 0.554249 | tig0024475:-2615 | None:intergenic |
| GAAACTCCAGTAGGAAATCT+CGG | 0.563571 | tig0024475:-1093 | None:intergenic |
| ATTGAAAAGAGAATCGAGAG+TGG | 0.563997 | tig0024475:+122 | Msa1417420:CDS |
| CATCCAATAATCGAGTTGGT+CGG | 0.565893 | tig0024475:-2435 | None:intergenic |
| GCCAACGCACAAGCCCCTAA+AGG | 0.569555 | tig0024475:-849 | None:intergenic |
| CGCTGCAAATGAGTATAACC+AGG | 0.570144 | tig0024475:-380 | None:intergenic |
| AGAAAGGTGCACTGCTGTGA+TGG | 0.574379 | tig0024475:-1128 | None:intergenic |
| CTACATAAGTTCATGCTGCA+TGG | 0.577413 | tig0024475:-2712 | None:intergenic |
| GATCCAATGGAACTTGTTCG+TGG | 0.578604 | tig0024475:+1259 | Msa1417420:CDS |
| CAAGACTCAAATCCAACAGT+TGG | 0.580199 | tig0024475:-2298 | None:intergenic |
| GCAATTCTTTGATGTGCACA+AGG | 0.581551 | tig0024475:-2276 | None:intergenic |
| TGGTGAAGAATGGGTACTGT+GGG | 0.591067 | tig0024475:+1156 | Msa1417420:CDS |
| AAGCTGGCTTTGAACAATCA+GGG | 0.595353 | tig0024475:+347 | Msa1417420:CDS |
| AGAGTATCCTAGTTGTCACT+GGG | 0.596813 | tig0024475:+2479 | Msa1417420:three_prime_UTR |
| CATTGATCGATTCATGACAT+CGG | 0.617561 | tig0024475:+887 | Msa1417420:CDS |
| CTTCAACATAAGCAAGCAGA+AGG | 0.625456 | tig0024475:-427 | None:intergenic |
| ACTCTTCTCACATTGTGCAA+AGG | 0.630735 | tig0024475:+1313 | Msa1417420:CDS |
| CATATTGAATAGTATCGATG+CGG | 0.633815 | tig0024475:+1063 | Msa1417420:intron |
| GTTCTAACACTGTCAAACAC+TGG | 0.634639 | tig0024475:-1522 | None:intergenic |
| TGGGATTTACTGCTCCAATG+AGG | 0.636183 | tig0024475:+916 | Msa1417420:CDS |
| TTATTTCTTATGGTTCCACC+GGG | 0.642386 | tig0024475:+2399 | Msa1417420:CDS |
| TGTTGAAACAGAATCGCTTG+GGG | 0.644193 | tig0024475:-1203 | None:intergenic |
| TTGGTGAAGAATGGGTACTG+TGG | 0.649560 | tig0024475:+1155 | Msa1417420:CDS |
| TAACAGAGAGAAACTCCAGT+AGG | 0.660772 | tig0024475:-1102 | None:intergenic |
| TAAGTCTGCCAGAGTCATAG+GGG | 0.665309 | tig0024475:+1282 | Msa1417420:CDS |
| GTTGCATCAAGATAACCAGC+CGG | 0.668367 | tig0024475:-1624 | None:intergenic |
| AAATCACGATTGTAAGCATG+TGG | 0.678548 | tig0024475:-1340 | None:intergenic |
| TATAAATCCAGTCTTTGACA+AGG | 0.699348 | tig0024475:+2334 | Msa1417420:CDS |
| GGCAACACAAGCAGACCCGG+TGG | 0.702657 | tig0024475:-2414 | None:intergenic |
| AAGTCTGCCAGAGTCATAGG+GGG | 0.718882 | tig0024475:+1283 | Msa1417420:CDS |
| GAGTATCCTAGTTGTCACTG+GGG | 0.753628 | tig0024475:+2480 | Msa1417420:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATGAAATAAAGTATT+TGG | + | tig0024475:2736-2755 | Msa1417420:three_prime_UTR | 10.0% |
| !!! | TATTTGAGATTCATTAAAAA+TGG | + | tig0024475:1467-1486 | Msa1417420:intron | 15.0% |
| !!! | TTATTGTATCATTACATTTT+AGG | + | tig0024475:2116-2135 | Msa1417420:intron | 15.0% |
| !! | CAAAGTTTGAATTATGTTAA+TGG | + | tig0024475:485-504 | Msa1417420:intron | 20.0% |
| !! | ATTATGTTAATGGAAAAGTA+TGG | + | tig0024475:495-514 | Msa1417420:intron | 20.0% |
| !!! | AAAATGAGCTATTCAATTTT+CGG | + | tig0024475:531-550 | Msa1417420:intron | 20.0% |
| !! | ATATGAATAACAAATCTATG+AGG | - | tig0024475:594-613 | None:intergenic | 20.0% |
| !!! | CTGTATATGACAATATTTTA+TGG | + | tig0024475:2072-2091 | Msa1417420:intron | 20.0% |
| !!! | ATCCAGAAATTTATTTCTTA+TGG | + | tig0024475:2389-2408 | Msa1417420:CDS | 20.0% |
| !! | AACCATAAGAAATAAATTTC+TGG | - | tig0024475:2394-2413 | None:intergenic | 20.0% |
| !! | AAACACAAGTTTATTATTTC+AGG | - | tig0024475:2522-2541 | None:intergenic | 20.0% |
| !!! | TATGAATTTTAATTTAGCCA+AGG | + | tig0024475:2598-2617 | Msa1417420:three_prime_UTR | 20.0% |
| !!! | TATGAAATAAAGTATTTGGA+TGG | + | tig0024475:2740-2759 | Msa1417420:three_prime_UTR | 20.0% |
| !!! | ATGAAATAAAGTATTTGGAT+GGG | + | tig0024475:2741-2760 | Msa1417420:three_prime_UTR | 20.0% |
| ! | GATTCTATTATTGAAGGTTT+GGG | + | tig0024475:95-114 | Msa1417420:CDS | 25.0% |
| !! | TTAATGGAAAAGTATGGATT+TGG | + | tig0024475:501-520 | Msa1417420:intron | 25.0% |
| ! | AGTACACAATTAACTCTATT+AGG | - | tig0024475:665-684 | None:intergenic | 25.0% |
| !!! | TAACATCATCGTTATTTTAC+CGG | + | tig0024475:702-721 | Msa1417420:intron | 25.0% |
| !!! | ATAGGTATCTTACTTTTTAC+TGG | + | tig0024475:940-959 | Msa1417420:intron | 25.0% |
| !!! | TCATTAAAAATGGTTGCTTT+TGG | + | tig0024475:1477-1496 | Msa1417420:intron | 25.0% |
| ! | CAATGAACATTACTTTCAAT+CGG | + | tig0024475:1580-1599 | Msa1417420:CDS | 25.0% |
| ! | AATGAACATTACTTTCAATC+GGG | + | tig0024475:1581-1600 | Msa1417420:CDS | 25.0% |
| !! | TAATTTTTACCTCAAACTGA+AGG | - | tig0024475:1697-1716 | None:intergenic | 25.0% |
| ! | CTGAAAGTTTAGATTTACAA+GGG | - | tig0024475:1822-1841 | None:intergenic | 25.0% |
| ! | ACTGAAAGTTTAGATTTACA+AGG | - | tig0024475:1823-1842 | None:intergenic | 25.0% |
| ! | ATCTATTTCCTTCATTCAAA+TGG | - | tig0024475:1893-1912 | None:intergenic | 25.0% |
| ! | AATGATAACCATAATCATTG+TGG | - | tig0024475:1970-1989 | None:intergenic | 25.0% |
| ! | AGTGGAAAGATTGTAATAAT+AGG | - | tig0024475:2019-2038 | None:intergenic | 25.0% |
| ! | AAAGAAAAAAGGGTAAGAAT+CGG | - | tig0024475:2201-2220 | None:intergenic | 25.0% |
| !! | ATATCATGAGATGTTCTAAA+TGG | - | tig0024475:2239-2258 | None:intergenic | 25.0% |
| ! | ATCATGTTGCATATTTGAAT+AGG | + | tig0024475:2549-2568 | Msa1417420:three_prime_UTR | 25.0% |
| GATAGGGATTCTATTATTGA+AGG | + | tig0024475:89-108 | Msa1417420:CDS | 30.0% | |
| GGATTCTATTATTGAAGGTT+TGG | + | tig0024475:94-113 | Msa1417420:CDS | 30.0% | |
| AACTTGATCATTTCTACTTC+TGG | - | tig0024475:246-265 | None:intergenic | 30.0% | |
| !! | TTGTTACTGATTTACGACTT+TGG | + | tig0024475:264-283 | Msa1417420:CDS | 30.0% |
| GAGTTAATTGTGTACTTTAG+AGG | + | tig0024475:669-688 | Msa1417420:intron | 30.0% | |
| GGTAAAATAACGATGATGTT+AGG | - | tig0024475:703-722 | None:intergenic | 30.0% | |
| ! | AGGATGAATTTTTGTCCTTT+AGG | + | tig0024475:834-853 | Msa1417420:CDS | 30.0% |
| ! | GGATGAATTTTTGTCCTTTA+GGG | + | tig0024475:835-854 | Msa1417420:CDS | 30.0% |
| ! | GATGAATTTTTGTCCTTTAG+GGG | + | tig0024475:836-855 | Msa1417420:CDS | 30.0% |
| TTGAAATTGATCCATGTAGT+TGG | + | tig0024475:964-983 | Msa1417420:intron | 30.0% | |
| !!! | GAATGTTCACGTTTTTTTCT+TGG | + | tig0024475:1016-1035 | Msa1417420:intron | 30.0% |
| !! | CATATTGAATAGTATCGATG+CGG | + | tig0024475:1063-1082 | Msa1417420:intron | 30.0% |
| ! | TGACAGTGTTAGAACTATTT+TGG | + | tig0024475:1530-1549 | Msa1417420:CDS | 30.0% |
| ! | GACAGTGTTAGAACTATTTT+GGG | + | tig0024475:1531-1550 | Msa1417420:CDS | 30.0% |
| AAGAATACAAAAGGCTTTAC+CGG | + | tig0024475:1605-1624 | Msa1417420:CDS | 30.0% | |
| TATGATATGAAGTGAAAGCA+TGG | + | tig0024475:1715-1734 | Msa1417420:intron | 30.0% | |
| !! | CTAGTTTTCCACAATGATTA+TGG | + | tig0024475:1959-1978 | Msa1417420:intron | 30.0% |
| !! | TACAATCTTTCCACTTTTAC+AGG | + | tig0024475:2024-2043 | Msa1417420:intron | 30.0% |
| TTGCGGAATAAGAAGAAAAT+TGG | - | tig0024475:2170-2189 | None:intergenic | 30.0% | |
| CCTGAATGTGAAAGAAAAAA+GGG | - | tig0024475:2211-2230 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTCTTTCACATTCA+GGG | + | tig0024475:2209-2228 | Msa1417420:intron | 30.0% |
| TATAAATCCAGTCTTTGACA+AGG | + | tig0024475:2334-2353 | Msa1417420:CDS | 30.0% | |
| AAGGATGTGTATGAATTTCT+TGG | + | tig0024475:2353-2372 | Msa1417420:CDS | 30.0% | |
| ! | TTTATTTCTTATGGTTCCAC+CGG | + | tig0024475:2398-2417 | Msa1417420:CDS | 30.0% |
| ! | TTTTCATCCAATAATCGAGT+TGG | - | tig0024475:2442-2461 | None:intergenic | 30.0% |
| ATTGAAAAGAGAATCGAGAG+TGG | + | tig0024475:122-141 | Msa1417420:CDS | 35.0% | |
| GAAGTATGTAACTTCTTAGC+AGG | - | tig0024475:224-243 | None:intergenic | 35.0% | |
| TCAACTTTCATTGCTTAAGC+TGG | + | tig0024475:331-350 | Msa1417420:CDS | 35.0% | |
| !! | AGAAGGTGCTGTAATAAAAC+AGG | - | tig0024475:413-432 | None:intergenic | 35.0% |
| GTTTGATTGATTGTAGAGCT+AGG | + | tig0024475:814-833 | Msa1417420:CDS | 35.0% | |
| GATGTCATGAATCGATCAAT+GGG | - | tig0024475:888-907 | None:intergenic | 35.0% | |
| ! | CATTGATCGATTCATGACAT+CGG | + | tig0024475:887-906 | Msa1417420:CDS | 35.0% |
| GTAAGATACCTATTCCTCAT+TGG | - | tig0024475:933-952 | None:intergenic | 35.0% | |
| GAAAAAGAATCCTGATCCAA+TGG | + | tig0024475:1246-1265 | Msa1417420:CDS | 35.0% | |
| AAATCACGATTGTAAGCATG+TGG | - | tig0024475:1343-1362 | None:intergenic | 35.0% | |
| !! | AACTATTTTGGGAATGCTTG+AGG | + | tig0024475:1542-1561 | Msa1417420:CDS | 35.0% |
| CAATCGGGAAAGAATACAAA+AGG | + | tig0024475:1596-1615 | Msa1417420:CDS | 35.0% | |
| ! | CGCTGATTATCTTGTTAAGA+AGG | + | tig0024475:1653-1672 | Msa1417420:CDS | 35.0% |
| ! | TTGATTTAGCCTTCAGTTTG+AGG | + | tig0024475:1685-1704 | Msa1417420:intron | 35.0% |
| ! | GATTGGTTCATATCTGAACT+TGG | - | tig0024475:1765-1784 | None:intergenic | 35.0% |
| ! | CATTAACAGGGATTTGAGAT+TGG | - | tig0024475:1782-1801 | None:intergenic | 35.0% |
| CCTTCATTCAAATGGTTCTT+GGG | - | tig0024475:1885-1904 | None:intergenic | 35.0% | |
| TCCTTCATTCAAATGGTTCT+TGG | - | tig0024475:1886-1905 | None:intergenic | 35.0% | |
| ATTGTGGAAAACTAGTACAG+AGG | - | tig0024475:1954-1973 | None:intergenic | 35.0% | |
| !!! | CCCTTTTTTCTTTCACATTC+AGG | + | tig0024475:2208-2227 | Msa1417420:intron | 35.0% |
| CCCTGAATGTGAAAGAAAAA+AGG | - | tig0024475:2212-2231 | None:intergenic | 35.0% | |
| AGAACATCTCATGATATAGC+AGG | + | tig0024475:2242-2261 | Msa1417420:CDS | 35.0% | |
| ATCAAAGAATTGCCAACTGT+TGG | + | tig0024475:2286-2305 | Msa1417420:CDS | 35.0% | |
| ! | TTATTTCTTATGGTTCCACC+GGG | + | tig0024475:2399-2418 | Msa1417420:CDS | 35.0% |
| ATTTAGCCAAGGTTACTGAA+TGG | + | tig0024475:2609-2628 | Msa1417420:three_prime_UTR | 35.0% | |
| TTTAGCCAAGGTTACTGAAT+GGG | + | tig0024475:2610-2629 | Msa1417420:three_prime_UTR | 35.0% | |
| TTTGATCAGTGCGAGTGATA+GGG | + | tig0024475:73-92 | Msa1417420:CDS | 40.0% | |
| TCGAGAGTGGTGAGTTTAAT+TGG | + | tig0024475:135-154 | Msa1417420:CDS | 40.0% | |
| TAATTGGAGAGCTGATAGAG+AGG | + | tig0024475:151-170 | Msa1417420:CDS | 40.0% | |
| !! | GCTGCTCTTACTGATTTGAT+TGG | + | tig0024475:194-213 | Msa1417420:CDS | 40.0% |
| !! | TAAGCTGGCTTTGAACAATC+AGG | + | tig0024475:346-365 | Msa1417420:CDS | 40.0% |
| !! | AAGCTGGCTTTGAACAATCA+GGG | + | tig0024475:347-366 | Msa1417420:CDS | 40.0% |
| !! | AATCAGGGTCTTATTGTTCC+TGG | + | tig0024475:362-381 | Msa1417420:CDS | 40.0% |
| CTTCAACATAAGCAAGCAGA+AGG | - | tig0024475:430-449 | None:intergenic | 40.0% | |
| TCTGCTTGCTTATGTTGAAG+AGG | + | tig0024475:430-449 | Msa1417420:CDS | 40.0% | |
| CCACAAGCGAATGAATAAAC+CGG | - | tig0024475:724-743 | None:intergenic | 40.0% | |
| CGGTTTATTCATTCGCTTGT+GGG | + | tig0024475:722-741 | Msa1417420:intron | 40.0% | |
| GGTTTATTCATTCGCTTGTG+GGG | + | tig0024475:723-742 | Msa1417420:intron | 40.0% | |
| CGATGTCATGAATCGATCAA+TGG | - | tig0024475:889-908 | None:intergenic | 40.0% | |
| ATTCATGACATCGGATGCAT+TGG | + | tig0024475:896-915 | Msa1417420:CDS | 40.0% | |
| TTCATGACATCGGATGCATT+GGG | + | tig0024475:897-916 | Msa1417420:CDS | 40.0% | |
| TTACTGCTCCAATGAGGAAT+AGG | + | tig0024475:922-941 | Msa1417420:CDS | 40.0% | |
| TTTAACATTAGTCCCATGCC+AGG | - | tig0024475:991-1010 | None:intergenic | 40.0% | |
| GAAACTCCAGTAGGAAATCT+CGG | - | tig0024475:1096-1115 | None:intergenic | 40.0% | |
| TAACAGAGAGAAACTCCAGT+AGG | - | tig0024475:1105-1124 | None:intergenic | 40.0% | |
| ATTCTTCACCAAGTCGAGAA+AGG | - | tig0024475:1147-1166 | None:intergenic | 40.0% | |
| !! | TTTCTCGACTTGGTGAAGAA+TGG | + | tig0024475:1146-1165 | Msa1417420:CDS | 40.0% |
| !! | TTCTCGACTTGGTGAAGAAT+GGG | + | tig0024475:1147-1166 | Msa1417420:CDS | 40.0% |
| TGTTGAAACAGAATCGCTTG+GGG | - | tig0024475:1206-1225 | None:intergenic | 40.0% | |
| CTGTTGAAACAGAATCGCTT+GGG | - | tig0024475:1207-1226 | None:intergenic | 40.0% | |
| ! | GGATCAGGATTCTTTTTCTG+AGG | - | tig0024475:1244-1263 | None:intergenic | 40.0% |
| TTACCACGAACAAGTTCCAT+TGG | - | tig0024475:1265-1284 | None:intergenic | 40.0% | |
| ACTCTTCTCACATTGTGCAA+AGG | + | tig0024475:1313-1332 | Msa1417420:CDS | 40.0% | |
| ! | TGCTTACAATCGTGATTTGC+AGG | + | tig0024475:1345-1364 | Msa1417420:CDS | 40.0% |
| !!! | GGTTGCTTTTGGTTGTAAGT+AGG | + | tig0024475:1488-1507 | Msa1417420:intron | 40.0% |
| GTTCTAACACTGTCAAACAC+TGG | - | tig0024475:1525-1544 | None:intergenic | 40.0% | |
| TCATATCTGAACTTGGACAG+TGG | - | tig0024475:1758-1777 | None:intergenic | 40.0% | |
| ! | GGTACTGGGTTACATTAACA+GGG | - | tig0024475:1794-1813 | None:intergenic | 40.0% |
| CTGTTAATGTAACCCAGTAC+CGG | + | tig0024475:1793-1812 | Msa1417420:intron | 40.0% | |
| TTTAGATTTACAAGGGCAGC+CGG | - | tig0024475:1815-1834 | None:intergenic | 40.0% | |
| AATGGTTCTTGGGAATGAGA+GGG | - | tig0024475:1875-1894 | None:intergenic | 40.0% | |
| AAATGGTTCTTGGGAATGAG+AGG | - | tig0024475:1876-1895 | None:intergenic | 40.0% | |
| CCCAAGAACCATTTGAATGA+AGG | + | tig0024475:1882-1901 | Msa1417420:intron | 40.0% | |
| GTGACTACAACCTGTAAAAG+TGG | - | tig0024475:2037-2056 | None:intergenic | 40.0% | |
| AAGAATCGGTGGCATATTTG+CGG | - | tig0024475:2187-2206 | None:intergenic | 40.0% | |
| GAAAAAAGGGTAAGAATCGG+TGG | - | tig0024475:2198-2217 | None:intergenic | 40.0% | |
| GCAATTCTTTGATGTGCACA+AGG | - | tig0024475:2279-2298 | None:intergenic | 40.0% | |
| CAAGACTCAAATCCAACAGT+TGG | - | tig0024475:2301-2320 | None:intergenic | 40.0% | |
| TACACATCCTTGTCAAAGAC+TGG | - | tig0024475:2344-2363 | None:intergenic | 40.0% | |
| !! | CATCCAATAATCGAGTTGGT+CGG | - | tig0024475:2438-2457 | None:intergenic | 40.0% |
| !! | AAGAGTATCCTAGTTGTCAC+TGG | + | tig0024475:2478-2497 | Msa1417420:exon | 40.0% |
| ! | AGAGTATCCTAGTTGTCACT+GGG | + | tig0024475:2479-2498 | Msa1417420:three_prime_UTR | 40.0% |
| AACTACCCATTCAGTAACCT+TGG | - | tig0024475:2618-2637 | None:intergenic | 40.0% | |
| CTACATAAGTTCATGCTGCA+TGG | - | tig0024475:2715-2734 | None:intergenic | 40.0% | |
| GTTTGATCAGTGCGAGTGAT+AGG | + | tig0024475:72-91 | Msa1417420:CDS | 45.0% | |
| CGCTGCAAATGAGTATAACC+AGG | - | tig0024475:383-402 | None:intergenic | 45.0% | |
| CCGGTTTATTCATTCGCTTG+TGG | + | tig0024475:721-740 | Msa1417420:intron | 45.0% | |
| ATCACGCTCAATCTGCAAGA+GGG | - | tig0024475:787-806 | None:intergenic | 45.0% | |
| TGGGATTTACTGCTCCAATG+AGG | + | tig0024475:916-935 | Msa1417420:CDS | 45.0% | |
| TTGATCCATGTAGTTGGACC+TGG | + | tig0024475:970-989 | Msa1417420:intron | 45.0% | |
| TTCTGACCGAGATTTCCTAC+TGG | + | tig0024475:1087-1106 | Msa1417420:CDS | 45.0% | |
| ! | TTGGTGAAGAATGGGTACTG+TGG | + | tig0024475:1155-1174 | Msa1417420:CDS | 45.0% |
| ! | TGGTGAAGAATGGGTACTGT+GGG | + | tig0024475:1156-1175 | Msa1417420:CDS | 45.0% |
| CCTGTTGAAACAGAATCGCT+TGG | - | tig0024475:1208-1227 | None:intergenic | 45.0% | |
| CCAAGCGATTCTGTTTCAAC+AGG | + | tig0024475:1205-1224 | Msa1417420:CDS | 45.0% | |
| CGAACAAGTTCCATTGGATC+AGG | - | tig0024475:1259-1278 | None:intergenic | 45.0% | |
| ! | GATCCAATGGAACTTGTTCG+TGG | + | tig0024475:1259-1278 | Msa1417420:CDS | 45.0% |
| GTAAGTCTGCCAGAGTCATA+GGG | + | tig0024475:1281-1300 | Msa1417420:CDS | 45.0% | |
| TAAGTCTGCCAGAGTCATAG+GGG | + | tig0024475:1282-1301 | Msa1417420:CDS | 45.0% | |
| AACTGCAGAGAAAACACGCA+AGG | - | tig0024475:1409-1428 | None:intergenic | 45.0% | |
| ATACAAAAGGCTTTACCGGC+TGG | + | tig0024475:1609-1628 | Msa1417420:CDS | 45.0% | |
| GTTGCATCAAGATAACCAGC+CGG | - | tig0024475:1627-1646 | None:intergenic | 45.0% | |
| TATCTGAACTTGGACAGTGG+CGG | - | tig0024475:1755-1774 | None:intergenic | 45.0% | |
| ! | CGGTACTGGGTTACATTAAC+AGG | - | tig0024475:1795-1814 | None:intergenic | 45.0% |
| TTGCCGACCAACTCGATTAT+TGG | + | tig0024475:2432-2451 | Msa1417420:CDS | 45.0% | |
| GAGTATCCTAGTTGTCACTG+GGG | + | tig0024475:2480-2499 | Msa1417420:three_prime_UTR | 45.0% | |
| TCACGCTCAATCTGCAAGAG+GGG | - | tig0024475:786-805 | None:intergenic | 50.0% | |
| CATCACGCTCAATCTGCAAG+AGG | - | tig0024475:788-807 | None:intergenic | 50.0% | |
| TTGCAGATTGAGCGTGATGC+TGG | + | tig0024475:789-808 | Msa1417420:intron | 50.0% | |
| CATGTAGTTGGACCTGGCAT+GGG | + | tig0024475:976-995 | Msa1417420:intron | 50.0% | |
| ! | AGAAAGGTGCACTGCTGTGA+TGG | - | tig0024475:1131-1150 | None:intergenic | 50.0% |
| CTGTGGGCTTCAGAGGAATT+TGG | + | tig0024475:1172-1191 | Msa1417420:CDS | 50.0% | |
| GGTAAGTCTGCCAGAGTCAT+AGG | + | tig0024475:1280-1299 | Msa1417420:CDS | 50.0% | |
| AAGTCTGCCAGAGTCATAGG+GGG | + | tig0024475:1283-1302 | Msa1417420:CDS | 50.0% | |
| ATCTGAACTTGGACAGTGGC+GGG | - | tig0024475:1754-1773 | None:intergenic | 50.0% | |
| GCAAGAAGCTCACGACTTCA+AGG | - | tig0024475:2665-2684 | None:intergenic | 50.0% | |
| ! | TCCTTTAGGGGCTTGTGCGT+TGG | + | tig0024475:848-867 | Msa1417420:CDS | 55.0% |
| !! | CTTGTGCGTTGGCTGGTACA+GGG | + | tig0024475:859-878 | Msa1417420:CDS | 55.0% |
| CCATGCCAGGTCCAACTACA+TGG | - | tig0024475:978-997 | None:intergenic | 55.0% | |
| CCATGTAGTTGGACCTGGCA+TGG | + | tig0024475:975-994 | Msa1417420:intron | 55.0% | |
| GCAGTGCACCTTTCTCGACT+TGG | + | tig0024475:1136-1155 | Msa1417420:CDS | 55.0% | |
| ! | ATGGGTACTGTGGGCTTCAG+AGG | + | tig0024475:1165-1184 | Msa1417420:CDS | 55.0% |
| TGCCAGAGTCATAGGGGGTT+TGG | + | tig0024475:1288-1307 | Msa1417420:CDS | 55.0% | |
| GACCAAACCCCCTATGACTC+TGG | - | tig0024475:1293-1312 | None:intergenic | 55.0% | |
| TTACAAGGGCAGCCGGTACT+GGG | - | tig0024475:1808-1827 | None:intergenic | 55.0% | |
| TTTACAAGGGCAGCCGGTAC+TGG | - | tig0024475:1809-1828 | None:intergenic | 55.0% | |
| CAGCTTCCCCAGTGACAACT+AGG | - | tig0024475:2489-2508 | None:intergenic | 55.0% | |
| GCCAACGCACAAGCCCCTAA+AGG | - | tig0024475:852-871 | None:intergenic | 60.0% | |
| ! | TTAGGGGCTTGTGCGTTGGC+TGG | + | tig0024475:852-871 | Msa1417420:CDS | 60.0% |
| !! | GCTTGTGCGTTGGCTGGTAC+AGG | + | tig0024475:858-877 | Msa1417420:CDS | 60.0% |
| GTCGGCAACACAAGCAGACC+CGG | - | tig0024475:2420-2439 | None:intergenic | 60.0% | |
| GGCAACACAAGCAGACCCGG+TGG | - | tig0024475:2417-2436 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024475 | gene | 71 | 2775 | 71 | ID=Msa1417420;Name=Msa1417420 |
| tig0024475 | mRNA | 71 | 2775 | 71 | ID=Msa1417420-mRNA-1;Parent=Msa1417420;Name=Msa1417420-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0.8|1|1|1|5|297|411 |
| tig0024475 | exon | 71 | 451 | 71 | ID=Msa1417420-mRNA-1:exon:23392;Parent=Msa1417420-mRNA-1 |
| tig0024475 | exon | 795 | 943 | 795 | ID=Msa1417420-mRNA-1:exon:23393;Parent=Msa1417420-mRNA-1 |
| tig0024475 | exon | 1075 | 1366 | 1075 | ID=Msa1417420-mRNA-1:exon:23394;Parent=Msa1417420-mRNA-1 |
| tig0024475 | exon | 1510 | 1674 | 1510 | ID=Msa1417420-mRNA-1:exon:23395;Parent=Msa1417420-mRNA-1 |
| tig0024475 | exon | 2230 | 2775 | 2230 | ID=Msa1417420-mRNA-1:exon:23396;Parent=Msa1417420-mRNA-1 |
| tig0024475 | CDS | 71 | 451 | 71 | ID=Msa1417420-mRNA-1:cds;Parent=Msa1417420-mRNA-1 |
| tig0024475 | CDS | 795 | 943 | 795 | ID=Msa1417420-mRNA-1:cds;Parent=Msa1417420-mRNA-1 |
| tig0024475 | CDS | 1075 | 1366 | 1075 | ID=Msa1417420-mRNA-1:cds;Parent=Msa1417420-mRNA-1 |
| tig0024475 | CDS | 1510 | 1674 | 1510 | ID=Msa1417420-mRNA-1:cds;Parent=Msa1417420-mRNA-1 |
| tig0024475 | CDS | 2230 | 2478 | 2230 | ID=Msa1417420-mRNA-1:cds;Parent=Msa1417420-mRNA-1 |
| tig0024475 | three_prime_UTR | 2479 | 2775 | 2479 | ID=Msa1417420-mRNA-1:three_prime_utr;Parent=Msa1417420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
