Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333810 | sp|Q9FWW5|Y1215_ARATH | 46.858 | 557 | 258 | 9 | 5 | 545 | 11 | 545 | 2.43e-123 | 376 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333810 | A0A396ILB0 | 95.722 | 561 | 24 | 0 | 1 | 561 | 1 | 561 | 0.0 | 1001 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037880 | Msa1333810 | 0.807335 | 5.315390e-50 | -8.615850e-47 |
| Msa0102120 | Msa1333810 | 0.803553 | 3.299328e-49 | -8.615850e-47 |
| Msa0112750 | Msa1333810 | 0.801885 | 7.288667e-49 | -8.615850e-47 |
| Msa0117770 | Msa1333810 | 0.810994 | 8.736969e-51 | -8.615850e-47 |
| Msa0771720 | Msa1333810 | 0.809172 | 2.158192e-50 | -8.615850e-47 |
| Msa0790510 | Msa1333810 | 0.811582 | 6.515593e-51 | -8.615850e-47 |
| Msa0122590 | Msa1333810 | 0.805045 | 1.613576e-49 | -8.615850e-47 |
| Msa0178860 | Msa1333810 | -0.808443 | 3.089328e-50 | -8.615850e-47 |
| Msa0188830 | Msa1333810 | 0.810587 | 1.070372e-50 | -8.615850e-47 |
| Msa0206010 | Msa1333810 | 0.805055 | 1.605945e-49 | -8.615850e-47 |
| Msa1276440 | Msa1333810 | 0.801858 | 7.383484e-49 | -8.615850e-47 |
| Msa1333710 | Msa1333810 | 0.991897 | 3.766308e-190 | -8.615850e-47 |
| Msa1333810 | Msa1382930 | 0.812229 | 4.708360e-51 | -8.615850e-47 |
| Msa1333810 | Msa1392260 | 0.822517 | 2.271221e-53 | -8.615850e-47 |
| Msa1333810 | Msa1393040 | 0.822366 | 2.461651e-53 | -8.615850e-47 |
| Msa1333810 | Msa1397120 | 0.812461 | 4.189982e-51 | -8.615850e-47 |
| Msa1333810 | Msa1438910 | 0.805447 | 1.329114e-49 | -8.615850e-47 |
| Msa1333810 | Msa1445030 | 0.819780 | 9.703694e-53 | -8.615850e-47 |
| Msa1333810 | Msa1451620 | -0.840268 | 9.632639e-58 | -8.615850e-47 |
| Msa0379640 | Msa1333810 | 0.814339 | 1.620051e-51 | -8.615850e-47 |
| Msa0382180 | Msa1333810 | 0.801031 | 1.090728e-48 | -8.615850e-47 |
| Msa0428930 | Msa1333810 | 0.803214 | 3.878436e-49 | -8.615850e-47 |
| Msa0431690 | Msa1333810 | 0.803672 | 3.117040e-49 | -8.615850e-47 |
| Msa0477130 | Msa1333810 | -0.809511 | 1.825039e-50 | -8.615850e-47 |
| Msa1002480 | Msa1333810 | 0.824243 | 8.970995e-54 | -8.615850e-47 |
| Msa1015730 | Msa1333810 | 0.804113 | 2.524296e-49 | -8.615850e-47 |
| Msa1015790 | Msa1333810 | 0.823814 | 1.130881e-53 | -8.615850e-47 |
| Msa1059570 | Msa1333810 | 0.805668 | 1.194522e-49 | -8.615850e-47 |
| Msa1075080 | Msa1333810 | -0.803747 | 3.007501e-49 | -8.615850e-47 |
| Msa1082500 | Msa1333810 | 0.803547 | 3.309396e-49 | -8.615850e-47 |
| Msa0270100 | Msa1333810 | 0.804196 | 2.425970e-49 | -8.615850e-47 |
| Msa0288100 | Msa1333810 | 0.812583 | 3.942114e-51 | -8.615850e-47 |
| Msa0319170 | Msa1333810 | 0.804268 | 2.343506e-49 | -8.615850e-47 |
| Msa0326110 | Msa1333810 | 0.805412 | 1.351794e-49 | -8.615850e-47 |
| Msa0344690 | Msa1333810 | -0.800885 | 1.168415e-48 | -8.615850e-47 |
| Msa1130110 | Msa1333810 | 0.800493 | 1.404396e-48 | -8.615850e-47 |
| Msa1162550 | Msa1333810 | -0.800470 | 1.419810e-48 | -8.615850e-47 |
| Msa1224500 | Msa1333810 | 0.973088 | 7.716539e-136 | -8.615850e-47 |
| Msa0484780 | Msa1333810 | 0.809993 | 1.437554e-50 | -8.615850e-47 |
| Msa0575470 | Msa1333810 | 0.804500 | 2.097140e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333810 | MtrunA17_Chr4g0076431 | 95.722 | 561 | 24 | 0 | 1 | 561 | 1 | 561 | 0.0 | 1001 |
| Msa1333810 | MtrunA17_Chr2g0290651 | 58.947 | 570 | 217 | 6 | 2 | 557 | 11 | 577 | 0.0 | 552 |
| Msa1333810 | MtrunA17_Chr4g0075951 | 94.393 | 321 | 18 | 0 | 241 | 561 | 5 | 325 | 0.0 | 538 |
| Msa1333810 | MtrunA17_Chr3g0102681 | 44.902 | 559 | 279 | 10 | 6 | 541 | 14 | 566 | 3.34e-97 | 309 |
| Msa1333810 | MtrunA17_Chr5g0446731 | 38.624 | 567 | 311 | 10 | 6 | 543 | 15 | 573 | 7.00e-77 | 256 |
| Msa1333810 | MtrunA17_Chr3g0078801 | 39.115 | 565 | 301 | 9 | 11 | 543 | 20 | 573 | 1.75e-75 | 252 |
| Msa1333810 | MtrunA17_Chr1g0153431 | 26.510 | 596 | 355 | 18 | 5 | 540 | 259 | 831 | 1.10e-13 | 74.3 |
| Msa1333810 | MtrunA17_Chr3g0133891 | 26.923 | 598 | 350 | 21 | 1 | 540 | 281 | 849 | 4.92e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1333810 | AT1G12150.2 | 46.858 | 557 | 258 | 9 | 5 | 545 | 11 | 545 | 2.47e-124 | 376 |
| Msa1333810 | AT1G12150.1 | 46.858 | 557 | 258 | 9 | 5 | 545 | 11 | 545 | 2.47e-124 | 376 |
| Msa1333810 | AT5G55860.1 | 40.925 | 562 | 299 | 9 | 6 | 543 | 14 | 566 | 5.85e-79 | 261 |
| Msa1333810 | AT4G17210.1 | 32.675 | 557 | 308 | 9 | 7 | 543 | 17 | 526 | 3.32e-61 | 211 |
| Msa1333810 | AT2G26570.1 | 27.863 | 585 | 358 | 19 | 2 | 540 | 156 | 722 | 5.94e-20 | 94.4 |
| Msa1333810 | AT2G26570.2 | 27.863 | 585 | 358 | 19 | 2 | 540 | 156 | 722 | 5.94e-20 | 94.4 |
| Msa1333810 | AT4G33390.1 | 27.119 | 590 | 338 | 17 | 14 | 541 | 156 | 715 | 3.81e-12 | 69.7 |
Find 94 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATCATATTCATTCTTTA+AGG | 0.132312 | 8_4:+54086775 | None:intergenic |
| TTGTTTCCTCAACAGCTTTC+AGG | 0.144522 | 8_4:+54085985 | None:intergenic |
| CAAGTTTCGCGTCTAGATTT+TGG | 0.198421 | 8_4:+54086741 | None:intergenic |
| AAAGCTGCTGTTAGTTTATT+TGG | 0.205244 | 8_4:-54087804 | Msa1333810:CDS |
| GATAATCTTCATCTCTTTAA+TGG | 0.206604 | 8_4:+54086202 | None:intergenic |
| AGCCTTTCTGCTCATCTCTT+TGG | 0.236137 | 8_4:+54086337 | None:intergenic |
| CTCAATCTCTGCACTTGTTT+CGG | 0.295156 | 8_4:+54086718 | None:intergenic |
| GGCTGAAGCTGTGAGGAATA+AGG | 0.309488 | 8_4:-54087161 | Msa1333810:CDS |
| ACCCTATCCCTAAAAGTTAT+AGG | 0.313601 | 8_4:-54087121 | Msa1333810:CDS |
| CGGCAATTGAACGTGAATTA+AGG | 0.320877 | 8_4:-54085908 | Msa1333810:CDS |
| CTGTCTCCGATTGTAGCTTC+TGG | 0.322489 | 8_4:+54086378 | None:intergenic |
| CGCTTTGATTGCTGATTCCT+TGG | 0.325341 | 8_4:+54087183 | None:intergenic |
| GAGAAAATACTAGCTTCTTA+AGG | 0.329746 | 8_4:+54086576 | None:intergenic |
| CTGCTTCTTCAGCCGCTGCT+CGG | 0.339770 | 8_4:+54086285 | None:intergenic |
| AACATCCTGCAGTGTCTTTG+TGG | 0.340359 | 8_4:+54086616 | None:intergenic |
| CTCTCGATTTCAAAATTTAG+TGG | 0.349735 | 8_4:-54086161 | Msa1333810:CDS |
| GGCAAAGCTAGCAGCACTGC+AGG | 0.355322 | 8_4:-54086975 | Msa1333810:CDS |
| GTGCTCTATCGATGCTTTCA+TGG | 0.374865 | 8_4:+54086880 | None:intergenic |
| TAACAGCAGCTTTGACAGAT+TGG | 0.377262 | 8_4:+54087814 | None:intergenic |
| TTCTCTCACATTGTTCAGCT+TGG | 0.378811 | 8_4:+54087207 | None:intergenic |
| AGCAAGAACTCACGAAAATC+AGG | 0.398382 | 8_4:-54087021 | Msa1333810:CDS |
| AGAAAATACTAGCTTCTTAA+GGG | 0.410056 | 8_4:+54086577 | None:intergenic |
| TGCTTCTTCAGCCGCTGCTC+GGG | 0.410829 | 8_4:+54086286 | None:intergenic |
| CTAGCAGCACTGCAGGCAAC+AGG | 0.421103 | 8_4:-54086968 | Msa1333810:CDS |
| CAAACTCTCAAGGGTCTCCT+TGG | 0.423083 | 8_4:+54087234 | None:intergenic |
| ATCGGTGAAGATGTACTATC+AGG | 0.427441 | 8_4:+54085873 | None:intergenic |
| AGTGAAGGAATACCAAGAAT+TGG | 0.430131 | 8_4:-54086093 | Msa1333810:CDS |
| GCTGAAGCTGTGAGGAATAA+GGG | 0.430229 | 8_4:-54087160 | Msa1333810:CDS |
| CAAAATTTAGTGGTAAGATC+AGG | 0.437222 | 8_4:-54086151 | Msa1333810:CDS |
| TTATCTGAACAATCTGATAT+CGG | 0.442943 | 8_4:+54085855 | None:intergenic |
| GGAAAGTGCTTTAACTTTCG+TGG | 0.447771 | 8_4:+54087270 | None:intergenic |
| CTGCAAAATTTAACTCAGAA+AGG | 0.449552 | 8_4:-54086931 | Msa1333810:CDS |
| AAAGAAAGAGGCAGCTATCA+TGG | 0.460393 | 8_4:-54086066 | Msa1333810:CDS |
| CGAAACAAGTGCAGAGATTG+AGG | 0.462554 | 8_4:-54086717 | Msa1333810:CDS |
| TTGCTTGGAAGAATCTAGTT+CGG | 0.465635 | 8_4:+54087039 | None:intergenic |
| CTGCAATGGAGACGGCTTTG+TGG | 0.473961 | 8_4:-54085959 | Msa1333810:CDS |
| GAAGAGGCGGGGCCTCAGCC+AGG | 0.487515 | 8_4:-54086443 | Msa1333810:CDS |
| ATCTCTCCAACCTCTCCCCT+TGG | 0.489793 | 8_4:+54087855 | None:intergenic |
| AAAGCTTCATGCTTCCAAGA+TGG | 0.490345 | 8_4:-54086675 | Msa1333810:CDS |
| AGAGATGAGCAGAAAGGCTC+AGG | 0.494120 | 8_4:-54086333 | Msa1333810:CDS |
| GGCTTTGTGGTATGCAGAGA+TGG | 0.496437 | 8_4:-54085946 | Msa1333810:CDS |
| GCATCCACGGTACCTGGCTG+AGG | 0.500220 | 8_4:+54086431 | None:intergenic |
| GATTCTCCAAGGGGAGAGGT+TGG | 0.507507 | 8_4:-54087861 | Msa1333810:CDS |
| GAAGAGTTTGAGTCACTGAA+TGG | 0.508477 | 8_4:-54086119 | Msa1333810:CDS |
| GCTTGGTTGTCAAACTCTCA+AGG | 0.509583 | 8_4:+54087224 | None:intergenic |
| TCTGCAGAATGTATTTGAAA+AGG | 0.511045 | 8_4:-54087359 | Msa1333810:intron |
| AAGTTTCACAGAATCCATCT+TGG | 0.515653 | 8_4:+54086661 | None:intergenic |
| TTGACAGCGAATCTGTCCTT+AGG | 0.517593 | 8_4:+54087768 | None:intergenic |
| ACATTGGCATCCACGGTACC+TGG | 0.522638 | 8_4:+54086425 | None:intergenic |
| AAAGGAGACACAGCTTATCC+TGG | 0.526439 | 8_4:-54087341 | Msa1333810:CDS |
| TGAGGAAACAAAGGCTGCAA+TGG | 0.535827 | 8_4:-54085973 | Msa1333810:CDS |
| TAAAATCCAGAAGCTACAAT+CGG | 0.536535 | 8_4:-54086384 | Msa1333810:CDS |
| TGGTGAAGTAGCAGTTCCTA+AGG | 0.542024 | 8_4:-54087784 | Msa1333810:CDS |
| AGCTAACCTGAAAGCTGTTG+AGG | 0.545144 | 8_4:-54085991 | Msa1333810:CDS |
| CTCCTTGGCCTTCTCAAGGT+CGG | 0.546026 | 8_4:+54087249 | None:intergenic |
| AAGTTATAGGATATGAAGCT+TGG | 0.546034 | 8_4:-54087108 | Msa1333810:CDS |
| GGGTCTCCTTGGCCTTCTCA+AGG | 0.547497 | 8_4:+54087245 | None:intergenic |
| GAGCAAAGATATGAGAAAGG+TGG | 0.550127 | 8_4:-54087883 | None:intergenic |
| TTAGAGCAAAGATATGAGAA+AGG | 0.552619 | 8_4:-54087886 | None:intergenic |
| GAAAGAGCAAGATGAGCTGA+AGG | 0.554843 | 8_4:-54086528 | Msa1333810:CDS |
| AGCTGAAGCATCCCGAGCAG+CGG | 0.556164 | 8_4:-54086297 | Msa1333810:CDS |
| AACAAAGGCTGCAATGGAGA+CGG | 0.559947 | 8_4:-54085967 | Msa1333810:CDS |
| GGTGGATTCTCCAAGGGGAG+AGG | 0.568728 | 8_4:-54087865 | Msa1333810:CDS |
| AAAAGAGCGCGGAAGAGGCG+GGG | 0.571475 | 8_4:-54086454 | Msa1333810:CDS |
| AAGAAACGAGTACACGACTA+AGG | 0.572909 | 8_4:-54087065 | Msa1333810:CDS |
| AGCCAAAGAGATGAGCAGAA+AGG | 0.575074 | 8_4:-54086339 | Msa1333810:CDS |
| GAACAATGTGAGAGAATCCA+AGG | 0.577444 | 8_4:-54087200 | Msa1333810:CDS |
| AGCACTTTCCGACCTTGAGA+AGG | 0.580366 | 8_4:-54087257 | Msa1333810:CDS |
| GTCACTGAATGGAAAAGTGA+AGG | 0.582811 | 8_4:-54086108 | Msa1333810:CDS |
| GATCTTGCTTCTAACCTCAC+TGG | 0.583636 | 8_4:-54086485 | Msa1333810:CDS |
| CTTGGTTGTCAAACTCTCAA+GGG | 0.592536 | 8_4:+54087225 | None:intergenic |
| AGAATTGGCAGAAAAGAAAG+AGG | 0.594912 | 8_4:-54086078 | Msa1333810:CDS |
| GTAGAAGACATTGGCATCCA+CGG | 0.595783 | 8_4:+54086418 | None:intergenic |
| TTCCGACCTTGAGAAGGCCA+AGG | 0.596478 | 8_4:-54087251 | Msa1333810:CDS |
| TGAGAAAGGTGGATTCTCCA+AGG | 0.601503 | 8_4:-54087872 | Msa1333810:CDS |
| GAAAGCTGTTGAGGAAACAA+AGG | 0.603568 | 8_4:-54085982 | Msa1333810:CDS |
| GAGAAAGGTGGATTCTCCAA+GGG | 0.604164 | 8_4:-54087871 | Msa1333810:CDS |
| GCTATCATGGCTGAGTTGCA+AGG | 0.607203 | 8_4:-54086053 | Msa1333810:CDS |
| AAATGAATTAGACATAAAGG+TGG | 0.613977 | 8_4:-54086015 | Msa1333810:CDS |
| AGAACTCACGAAAATCAGGC+AGG | 0.613981 | 8_4:-54087017 | Msa1333810:CDS |
| GATGGCAAATTCTGCAAAAG+CGG | 0.615271 | 8_4:-54085928 | Msa1333810:CDS |
| AGAAGCCACAAAGACACTGC+AGG | 0.623758 | 8_4:-54086621 | Msa1333810:CDS |
| GGTTGGAGAGATTGACACAA+GGG | 0.639933 | 8_4:-54087844 | Msa1333810:CDS |
| AAATTTAACTCAGAAAGGAT+CGG | 0.640420 | 8_4:-54086926 | Msa1333810:CDS |
| ACTTTGCATGTAGAAGACAT+TGG | 0.657532 | 8_4:+54086409 | None:intergenic |
| GCAGCTTTGACAGATTGGAA+TGG | 0.664413 | 8_4:+54087819 | None:intergenic |
| AGTTGCAAGGAATGTACACA+AGG | 0.668978 | 8_4:-54086040 | Msa1333810:CDS |
| AGGTTGGAGAGATTGACACA+AGG | 0.675431 | 8_4:-54087845 | Msa1333810:CDS |
| AAGGATCGGTGAACTCTCAG+AGG | 0.679076 | 8_4:-54086912 | Msa1333810:CDS |
| TGTCAAGAGAAGATCGTCAG+AGG | 0.688771 | 8_4:-54087751 | Msa1333810:intron |
| TCAAAGCGGCTGAAGCTGTG+AGG | 0.688806 | 8_4:-54087168 | Msa1333810:CDS |
| AGAAAGGTGGATTCTCCAAG+GGG | 0.690833 | 8_4:-54087870 | Msa1333810:CDS |
| CGAGAGTCTACTTTGCACGT+CGG | 0.708077 | 8_4:+54086178 | None:intergenic |
| CAAGGAATCAGCAATCAAAG+CGG | 0.736218 | 8_4:-54087182 | Msa1333810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATAATTTATACCATAT+TGG | - | chr8_4:54085991-54086010 | Msa1333810:CDS | 10.0% |
| !! | TATAATAATTTATACCATAT+TGG | - | chr8_4:54085991-54086010 | Msa1333810:CDS | 10.0% |
| !! | TGTATAAAAAAAATCCAATA+TGG | + | chr8_4:54086008-54086027 | None:intergenic | 15.0% |
| !!! | TTTTATACATATTGTTTCAT+AGG | - | chr8_4:54086019-54086038 | Msa1333810:CDS | 15.0% |
| !!! | TAACTTACATAATTCTTTTT+GGG | + | chr8_4:54086391-54086410 | None:intergenic | 15.0% |
| !!! | TTAACTTACATAATTCTTTT+TGG | + | chr8_4:54086392-54086411 | None:intergenic | 15.0% |
| !! | TGTATAAAAAAAATCCAATA+TGG | + | chr8_4:54086008-54086027 | None:intergenic | 15.0% |
| !!! | TTTTATACATATTGTTTCAT+AGG | - | chr8_4:54086019-54086038 | Msa1333810:CDS | 15.0% |
| !!! | TAACTTACATAATTCTTTTT+GGG | + | chr8_4:54086391-54086410 | None:intergenic | 15.0% |
| !!! | TTAACTTACATAATTCTTTT+TGG | + | chr8_4:54086392-54086411 | None:intergenic | 15.0% |
| !!! | TTCATATCCTATAACTTTTA+GGG | + | chr8_4:54086595-54086614 | None:intergenic | 20.0% |
| !! | ATCATCATATTCATTCTTTA+AGG | + | chr8_4:54086934-54086953 | None:intergenic | 20.0% |
| !! | GAAAAATGAATTAGACATAA+AGG | - | chr8_4:54087688-54087707 | Msa1333810:intron | 20.0% |
| !!! | TTCATATCCTATAACTTTTA+GGG | + | chr8_4:54086595-54086614 | None:intergenic | 20.0% |
| !! | ATCATCATATTCATTCTTTA+AGG | + | chr8_4:54086934-54086953 | None:intergenic | 20.0% |
| !! | GAAAAATGAATTAGACATAA+AGG | - | chr8_4:54087688-54087707 | Msa1333810:intron | 20.0% |
| !! | ATCCTAGACATTTTAAATGT+TGG | - | chr8_4:54086106-54086125 | Msa1333810:CDS | 25.0% |
| !! | TTCCAACATTTAAAATGTCT+AGG | + | chr8_4:54086111-54086130 | None:intergenic | 25.0% |
| !! | CTTCATATCCTATAACTTTT+AGG | + | chr8_4:54086596-54086615 | None:intergenic | 25.0% |
| ! | AAATTTAACTCAGAAAGGAT+CGG | - | chr8_4:54086780-54086799 | Msa1333810:CDS | 25.0% |
| !!! | AGTTTTGTAAAAGTCGAATT+GGG | + | chr8_4:54086880-54086899 | None:intergenic | 25.0% |
| !! | AGAAAATACTAGCTTCTTAA+GGG | + | chr8_4:54087132-54087151 | None:intergenic | 25.0% |
| ! | GATAATCTTCATCTCTTTAA+TGG | + | chr8_4:54087507-54087526 | None:intergenic | 25.0% |
| ! | AAATGAATTAGACATAAAGG+TGG | - | chr8_4:54087691-54087710 | Msa1333810:intron | 25.0% |
| ! | TTATCTGAACAATCTGATAT+CGG | + | chr8_4:54087854-54087873 | None:intergenic | 25.0% |
| !! | ATCCTAGACATTTTAAATGT+TGG | - | chr8_4:54086106-54086125 | Msa1333810:CDS | 25.0% |
| !! | TTCCAACATTTAAAATGTCT+AGG | + | chr8_4:54086111-54086130 | None:intergenic | 25.0% |
| !! | CTTCATATCCTATAACTTTT+AGG | + | chr8_4:54086596-54086615 | None:intergenic | 25.0% |
| ! | AAATTTAACTCAGAAAGGAT+CGG | - | chr8_4:54086780-54086799 | Msa1333810:CDS | 25.0% |
| !!! | AGTTTTGTAAAAGTCGAATT+GGG | + | chr8_4:54086880-54086899 | None:intergenic | 25.0% |
| !! | AGAAAATACTAGCTTCTTAA+GGG | + | chr8_4:54087132-54087151 | None:intergenic | 25.0% |
| ! | GATAATCTTCATCTCTTTAA+TGG | + | chr8_4:54087507-54087526 | None:intergenic | 25.0% |
| ! | AAATGAATTAGACATAAAGG+TGG | - | chr8_4:54087691-54087710 | Msa1333810:intron | 25.0% |
| ! | TTATCTGAACAATCTGATAT+CGG | + | chr8_4:54087854-54087873 | None:intergenic | 25.0% |
| ! | AAAGCTGCTGTTAGTTTATT+TGG | - | chr8_4:54085902-54085921 | Msa1333810:CDS | 30.0% |
| TGACACACAAACAATACAAA+AGG | - | chr8_4:54086198-54086217 | Msa1333810:CDS | 30.0% | |
| ! | AAGAAGTGTGAAACTTGTTT+AGG | + | chr8_4:54086321-54086340 | None:intergenic | 30.0% |
| AAACAAGTTTCACACTTCTT+TGG | - | chr8_4:54086321-54086340 | Msa1333810:CDS | 30.0% | |
| TCTGCAGAATGTATTTGAAA+AGG | - | chr8_4:54086347-54086366 | Msa1333810:CDS | 30.0% | |
| !! | TCCTATAACTTTTAGGGATA+GGG | + | chr8_4:54086589-54086608 | None:intergenic | 30.0% |
| !! | ATCCTATAACTTTTAGGGAT+AGG | + | chr8_4:54086590-54086609 | None:intergenic | 30.0% |
| AAGTTATAGGATATGAAGCT+TGG | - | chr8_4:54086598-54086617 | Msa1333810:CDS | 30.0% | |
| CTGCAAAATTTAACTCAGAA+AGG | - | chr8_4:54086775-54086794 | Msa1333810:CDS | 30.0% | |
| !! | CAGTTTTGTAAAAGTCGAAT+TGG | + | chr8_4:54086881-54086900 | None:intergenic | 30.0% |
| !!! | TCTAGATTTTGGATTAGTTC+TGG | + | chr8_4:54086957-54086976 | None:intergenic | 30.0% |
| ! | GAGAAAATACTAGCTTCTTA+AGG | + | chr8_4:54087133-54087152 | None:intergenic | 30.0% |
| ! | AGAAGCTAGTATTTTCTCTT+AGG | - | chr8_4:54087135-54087154 | Msa1333810:CDS | 30.0% |
| TAAAATCCAGAAGCTACAAT+CGG | - | chr8_4:54087322-54087341 | Msa1333810:CDS | 30.0% | |
| !! | GAAAAAGCTAGAACTTGTTT+TGG | - | chr8_4:54087445-54087464 | Msa1333810:intron | 30.0% |
| CTCTCGATTTCAAAATTTAG+TGG | - | chr8_4:54087545-54087564 | Msa1333810:intron | 30.0% | |
| CAAAATTTAGTGGTAAGATC+AGG | - | chr8_4:54087555-54087574 | Msa1333810:intron | 30.0% | |
| ! | AAAGCTGCTGTTAGTTTATT+TGG | - | chr8_4:54085902-54085921 | Msa1333810:CDS | 30.0% |
| TGACACACAAACAATACAAA+AGG | - | chr8_4:54086198-54086217 | Msa1333810:CDS | 30.0% | |
| ! | AAGAAGTGTGAAACTTGTTT+AGG | + | chr8_4:54086321-54086340 | None:intergenic | 30.0% |
| AAACAAGTTTCACACTTCTT+TGG | - | chr8_4:54086321-54086340 | Msa1333810:CDS | 30.0% | |
| TCTGCAGAATGTATTTGAAA+AGG | - | chr8_4:54086347-54086366 | Msa1333810:CDS | 30.0% | |
| !! | TCCTATAACTTTTAGGGATA+GGG | + | chr8_4:54086589-54086608 | None:intergenic | 30.0% |
| !! | ATCCTATAACTTTTAGGGAT+AGG | + | chr8_4:54086590-54086609 | None:intergenic | 30.0% |
| AAGTTATAGGATATGAAGCT+TGG | - | chr8_4:54086598-54086617 | Msa1333810:CDS | 30.0% | |
| CTGCAAAATTTAACTCAGAA+AGG | - | chr8_4:54086775-54086794 | Msa1333810:CDS | 30.0% | |
| !! | CAGTTTTGTAAAAGTCGAAT+TGG | + | chr8_4:54086881-54086900 | None:intergenic | 30.0% |
| !!! | TCTAGATTTTGGATTAGTTC+TGG | + | chr8_4:54086957-54086976 | None:intergenic | 30.0% |
| ! | GAGAAAATACTAGCTTCTTA+AGG | + | chr8_4:54087133-54087152 | None:intergenic | 30.0% |
| ! | AGAAGCTAGTATTTTCTCTT+AGG | - | chr8_4:54087135-54087154 | Msa1333810:CDS | 30.0% |
| TAAAATCCAGAAGCTACAAT+CGG | - | chr8_4:54087322-54087341 | Msa1333810:CDS | 30.0% | |
| !! | GAAAAAGCTAGAACTTGTTT+TGG | - | chr8_4:54087445-54087464 | Msa1333810:intron | 30.0% |
| CTCTCGATTTCAAAATTTAG+TGG | - | chr8_4:54087545-54087564 | Msa1333810:intron | 30.0% | |
| CAAAATTTAGTGGTAAGATC+AGG | - | chr8_4:54087555-54087574 | Msa1333810:intron | 30.0% | |
| ! | TCAGGTATTGTGTGAAACTT+TGG | + | chr8_4:54086166-54086185 | None:intergenic | 35.0% |
| TTCACACAATACCTGATGTT+AGG | - | chr8_4:54086170-54086189 | Msa1333810:CDS | 35.0% | |
| !! | TACATAATTCTTTTTGGGCC+AGG | + | chr8_4:54086386-54086405 | None:intergenic | 35.0% |
| ACCCTATCCCTAAAAGTTAT+AGG | - | chr8_4:54086585-54086604 | Msa1333810:CDS | 35.0% | |
| TTGCTTGGAAGAATCTAGTT+CGG | + | chr8_4:54086670-54086689 | None:intergenic | 35.0% | |
| ! | AGAAGAAGCACAGAAAAAAC+TGG | - | chr8_4:54086905-54086924 | Msa1333810:CDS | 35.0% |
| AAGTTTCACAGAATCCATCT+TGG | + | chr8_4:54087048-54087067 | None:intergenic | 35.0% | |
| !!! | TCTTTTTCAATTCACCAGTG+AGG | + | chr8_4:54087238-54087257 | None:intergenic | 35.0% |
| ACTTTGCATGTAGAAGACAT+TGG | + | chr8_4:54087300-54087319 | None:intergenic | 35.0% | |
| AGTGAAGGAATACCAAGAAT+TGG | - | chr8_4:54087613-54087632 | Msa1333810:intron | 35.0% | |
| ! | CTTTCTTTTCTGCCAATTCT+TGG | + | chr8_4:54087628-54087647 | None:intergenic | 35.0% |
| AGAATTGGCAGAAAAGAAAG+AGG | - | chr8_4:54087628-54087647 | Msa1333810:intron | 35.0% | |
| ! | TCAGGTATTGTGTGAAACTT+TGG | + | chr8_4:54086166-54086185 | None:intergenic | 35.0% |
| TTCACACAATACCTGATGTT+AGG | - | chr8_4:54086170-54086189 | Msa1333810:CDS | 35.0% | |
| !! | TACATAATTCTTTTTGGGCC+AGG | + | chr8_4:54086386-54086405 | None:intergenic | 35.0% |
| ACCCTATCCCTAAAAGTTAT+AGG | - | chr8_4:54086585-54086604 | Msa1333810:CDS | 35.0% | |
| TTGCTTGGAAGAATCTAGTT+CGG | + | chr8_4:54086670-54086689 | None:intergenic | 35.0% | |
| ! | AGAAGAAGCACAGAAAAAAC+TGG | - | chr8_4:54086905-54086924 | Msa1333810:CDS | 35.0% |
| AAGTTTCACAGAATCCATCT+TGG | + | chr8_4:54087048-54087067 | None:intergenic | 35.0% | |
| !!! | TCTTTTTCAATTCACCAGTG+AGG | + | chr8_4:54087238-54087257 | None:intergenic | 35.0% |
| ACTTTGCATGTAGAAGACAT+TGG | + | chr8_4:54087300-54087319 | None:intergenic | 35.0% | |
| AGTGAAGGAATACCAAGAAT+TGG | - | chr8_4:54087613-54087632 | Msa1333810:intron | 35.0% | |
| ! | CTTTCTTTTCTGCCAATTCT+TGG | + | chr8_4:54087628-54087647 | None:intergenic | 35.0% |
| AGAATTGGCAGAAAAGAAAG+AGG | - | chr8_4:54087628-54087647 | Msa1333810:intron | 35.0% | |
| ! | TAACAGCAGCTTTGACAGAT+TGG | + | chr8_4:54085895-54085914 | None:intergenic | 40.0% |
| GTGTCAAATTGCCTAACATC+AGG | + | chr8_4:54086184-54086203 | None:intergenic | 40.0% | |
| ! | AAGTTTTTCCCATGACGAGA+GGG | + | chr8_4:54086224-54086243 | None:intergenic | 40.0% |
| ! | AAAGTTTTTCCCATGACGAG+AGG | + | chr8_4:54086225-54086244 | None:intergenic | 40.0% |
| !! | GGAAAGTGCTTTAACTTTCG+TGG | + | chr8_4:54086439-54086458 | None:intergenic | 40.0% |
| CTTGGTTGTCAAACTCTCAA+GGG | + | chr8_4:54086484-54086503 | None:intergenic | 40.0% | |
| TTCTCTCACATTGTTCAGCT+TGG | + | chr8_4:54086502-54086521 | None:intergenic | 40.0% | |
| GAACAATGTGAGAGAATCCA+AGG | - | chr8_4:54086506-54086525 | Msa1333810:CDS | 40.0% | |
| CAAGGAATCAGCAATCAAAG+CGG | - | chr8_4:54086524-54086543 | Msa1333810:CDS | 40.0% | |
| ! | AGGGATAGGGTCTTTTCAAA+TGG | + | chr8_4:54086576-54086595 | None:intergenic | 40.0% |
| AAGAAACGAGTACACGACTA+AGG | - | chr8_4:54086641-54086660 | Msa1333810:CDS | 40.0% | |
| ! | GATTTTCGTGAGTTCTTGCT+TGG | + | chr8_4:54086685-54086704 | None:intergenic | 40.0% |
| AGCAAGAACTCACGAAAATC+AGG | - | chr8_4:54086685-54086704 | Msa1333810:CDS | 40.0% | |
| !! | GCAGGATTTTGATGCAGTTT+TGG | - | chr8_4:54086707-54086726 | Msa1333810:CDS | 40.0% |
| !! | GGATTTTGATGCAGTTTTGG+AGG | - | chr8_4:54086710-54086729 | Msa1333810:CDS | 40.0% |
| ! | TTGGGTTTCATTTTGTGCAG+AGG | + | chr8_4:54086862-54086881 | None:intergenic | 40.0% |
| ! | AGAAGCACAGAAAAAACTGG+AGG | - | chr8_4:54086908-54086927 | Msa1333810:CDS | 40.0% |
| ! | CAAGTTTCGCGTCTAGATTT+TGG | + | chr8_4:54086968-54086987 | None:intergenic | 40.0% |
| CTCAATCTCTGCACTTGTTT+CGG | + | chr8_4:54086991-54087010 | None:intergenic | 40.0% | |
| AAAGCTTCATGCTTCCAAGA+TGG | - | chr8_4:54087031-54087050 | Msa1333810:CDS | 40.0% | |
| TGGTGAATTGAAAAAGAGCG+CGG | - | chr8_4:54087241-54087260 | Msa1333810:CDS | 40.0% | |
| !!! | GCTAGAACTTGTTTTGGAAG+AGG | - | chr8_4:54087451-54087470 | Msa1333810:intron | 40.0% |
| !!! | TGTTTTGGAAGAGGCTAAAG+AGG | - | chr8_4:54087460-54087479 | Msa1333810:intron | 40.0% |
| GGCAAAAACAGCAGAACAAA+AGG | - | chr8_4:54087481-54087500 | Msa1333810:intron | 40.0% | |
| GAAGAGTTTGAGTCACTGAA+TGG | - | chr8_4:54087587-54087606 | Msa1333810:intron | 40.0% | |
| GTCACTGAATGGAAAAGTGA+AGG | - | chr8_4:54087598-54087617 | Msa1333810:intron | 40.0% | |
| AAAGAAAGAGGCAGCTATCA+TGG | - | chr8_4:54087640-54087659 | Msa1333810:intron | 40.0% | |
| AGTTGCAAGGAATGTACACA+AGG | - | chr8_4:54087666-54087685 | Msa1333810:intron | 40.0% | |
| TTGTTTCCTCAACAGCTTTC+AGG | + | chr8_4:54087724-54087743 | None:intergenic | 40.0% | |
| GAAAGCTGTTGAGGAAACAA+AGG | - | chr8_4:54087724-54087743 | Msa1333810:intron | 40.0% | |
| GATGGCAAATTCTGCAAAAG+CGG | - | chr8_4:54087778-54087797 | Msa1333810:CDS | 40.0% | |
| CGGCAATTGAACGTGAATTA+AGG | - | chr8_4:54087798-54087817 | Msa1333810:CDS | 40.0% | |
| ATCGGTGAAGATGTACTATC+AGG | + | chr8_4:54087836-54087855 | None:intergenic | 40.0% | |
| ! | TAACAGCAGCTTTGACAGAT+TGG | + | chr8_4:54085895-54085914 | None:intergenic | 40.0% |
| GTGTCAAATTGCCTAACATC+AGG | + | chr8_4:54086184-54086203 | None:intergenic | 40.0% | |
| ! | AAGTTTTTCCCATGACGAGA+GGG | + | chr8_4:54086224-54086243 | None:intergenic | 40.0% |
| ! | AAAGTTTTTCCCATGACGAG+AGG | + | chr8_4:54086225-54086244 | None:intergenic | 40.0% |
| !! | GGAAAGTGCTTTAACTTTCG+TGG | + | chr8_4:54086439-54086458 | None:intergenic | 40.0% |
| CTTGGTTGTCAAACTCTCAA+GGG | + | chr8_4:54086484-54086503 | None:intergenic | 40.0% | |
| TTCTCTCACATTGTTCAGCT+TGG | + | chr8_4:54086502-54086521 | None:intergenic | 40.0% | |
| GAACAATGTGAGAGAATCCA+AGG | - | chr8_4:54086506-54086525 | Msa1333810:CDS | 40.0% | |
| CAAGGAATCAGCAATCAAAG+CGG | - | chr8_4:54086524-54086543 | Msa1333810:CDS | 40.0% | |
| ! | AGGGATAGGGTCTTTTCAAA+TGG | + | chr8_4:54086576-54086595 | None:intergenic | 40.0% |
| AAGAAACGAGTACACGACTA+AGG | - | chr8_4:54086641-54086660 | Msa1333810:CDS | 40.0% | |
| ! | GATTTTCGTGAGTTCTTGCT+TGG | + | chr8_4:54086685-54086704 | None:intergenic | 40.0% |
| AGCAAGAACTCACGAAAATC+AGG | - | chr8_4:54086685-54086704 | Msa1333810:CDS | 40.0% | |
| !! | GCAGGATTTTGATGCAGTTT+TGG | - | chr8_4:54086707-54086726 | Msa1333810:CDS | 40.0% |
| !! | GGATTTTGATGCAGTTTTGG+AGG | - | chr8_4:54086710-54086729 | Msa1333810:CDS | 40.0% |
| ! | TTGGGTTTCATTTTGTGCAG+AGG | + | chr8_4:54086862-54086881 | None:intergenic | 40.0% |
| ! | AGAAGCACAGAAAAAACTGG+AGG | - | chr8_4:54086908-54086927 | Msa1333810:CDS | 40.0% |
| ! | CAAGTTTCGCGTCTAGATTT+TGG | + | chr8_4:54086968-54086987 | None:intergenic | 40.0% |
| CTCAATCTCTGCACTTGTTT+CGG | + | chr8_4:54086991-54087010 | None:intergenic | 40.0% | |
| AAAGCTTCATGCTTCCAAGA+TGG | - | chr8_4:54087031-54087050 | Msa1333810:CDS | 40.0% | |
| TGGTGAATTGAAAAAGAGCG+CGG | - | chr8_4:54087241-54087260 | Msa1333810:CDS | 40.0% | |
| !!! | GCTAGAACTTGTTTTGGAAG+AGG | - | chr8_4:54087451-54087470 | Msa1333810:intron | 40.0% |
| !!! | TGTTTTGGAAGAGGCTAAAG+AGG | - | chr8_4:54087460-54087479 | Msa1333810:intron | 40.0% |
| GGCAAAAACAGCAGAACAAA+AGG | - | chr8_4:54087481-54087500 | Msa1333810:intron | 40.0% | |
| GAAGAGTTTGAGTCACTGAA+TGG | - | chr8_4:54087587-54087606 | Msa1333810:intron | 40.0% | |
| GTCACTGAATGGAAAAGTGA+AGG | - | chr8_4:54087598-54087617 | Msa1333810:intron | 40.0% | |
| AAAGAAAGAGGCAGCTATCA+TGG | - | chr8_4:54087640-54087659 | Msa1333810:intron | 40.0% | |
| AGTTGCAAGGAATGTACACA+AGG | - | chr8_4:54087666-54087685 | Msa1333810:intron | 40.0% | |
| TTGTTTCCTCAACAGCTTTC+AGG | + | chr8_4:54087724-54087743 | None:intergenic | 40.0% | |
| GAAAGCTGTTGAGGAAACAA+AGG | - | chr8_4:54087724-54087743 | Msa1333810:intron | 40.0% | |
| GATGGCAAATTCTGCAAAAG+CGG | - | chr8_4:54087778-54087797 | Msa1333810:CDS | 40.0% | |
| CGGCAATTGAACGTGAATTA+AGG | - | chr8_4:54087798-54087817 | Msa1333810:CDS | 40.0% | |
| ATCGGTGAAGATGTACTATC+AGG | + | chr8_4:54087836-54087855 | None:intergenic | 40.0% | |
| ! | TGAGAAAGGTGGATTCTCCA+AGG | - | chr8_4:54085834-54085853 | Msa1333810:CDS | 45.0% |
| ! | GAGAAAGGTGGATTCTCCAA+GGG | - | chr8_4:54085835-54085854 | Msa1333810:CDS | 45.0% |
| ! | AGAAAGGTGGATTCTCCAAG+GGG | - | chr8_4:54085836-54085855 | Msa1333810:CDS | 45.0% |
| AGGTTGGAGAGATTGACACA+AGG | - | chr8_4:54085861-54085880 | Msa1333810:CDS | 45.0% | |
| GGTTGGAGAGATTGACACAA+GGG | - | chr8_4:54085862-54085881 | Msa1333810:CDS | 45.0% | |
| ! | GCAGCTTTGACAGATTGGAA+TGG | + | chr8_4:54085890-54085909 | None:intergenic | 45.0% |
| TGGTGAAGTAGCAGTTCCTA+AGG | - | chr8_4:54085922-54085941 | Msa1333810:CDS | 45.0% | |
| TTGACAGCGAATCTGTCCTT+AGG | + | chr8_4:54085941-54085960 | None:intergenic | 45.0% | |
| TGTCAAGAGAAGATCGTCAG+AGG | - | chr8_4:54085955-54085974 | Msa1333810:CDS | 45.0% | |
| AAAGGAGACACAGCTTATCC+TGG | - | chr8_4:54086365-54086384 | Msa1333810:CDS | 45.0% | |
| GCTTGGTTGTCAAACTCTCA+AGG | + | chr8_4:54086485-54086504 | None:intergenic | 45.0% | |
| !! | CGCTTTGATTGCTGATTCCT+TGG | + | chr8_4:54086526-54086545 | None:intergenic | 45.0% |
| GCTGAAGCTGTGAGGAATAA+GGG | - | chr8_4:54086546-54086565 | Msa1333810:CDS | 45.0% | |
| AGAACTCACGAAAATCAGGC+AGG | - | chr8_4:54086689-54086708 | Msa1333810:CDS | 45.0% | |
| GTGCTCTATCGATGCTTTCA+TGG | + | chr8_4:54086829-54086848 | None:intergenic | 45.0% | |
| CGAAACAAGTGCAGAGATTG+AGG | - | chr8_4:54086989-54087008 | Msa1333810:CDS | 45.0% | |
| AACATCCTGCAGTGTCTTTG+TGG | + | chr8_4:54087093-54087112 | None:intergenic | 45.0% | |
| GAAAGAGCAAGATGAGCTGA+AGG | - | chr8_4:54087178-54087197 | Msa1333810:CDS | 45.0% | |
| GATCTTGCTTCTAACCTCAC+TGG | - | chr8_4:54087221-54087240 | Msa1333810:CDS | 45.0% | |
| ! | ATTGAAAAAGAGCGCGGAAG+AGG | - | chr8_4:54087247-54087266 | Msa1333810:CDS | 45.0% |
| GTAGAAGACATTGGCATCCA+CGG | + | chr8_4:54087291-54087310 | None:intergenic | 45.0% | |
| AGCCAAAGAGATGAGCAGAA+AGG | - | chr8_4:54087367-54087386 | Msa1333810:intron | 45.0% | |
| AGCCTTTCTGCTCATCTCTT+TGG | + | chr8_4:54087372-54087391 | None:intergenic | 45.0% | |
| AGCTAACCTGAAAGCTGTTG+AGG | - | chr8_4:54087715-54087734 | Msa1333810:intron | 45.0% | |
| TGAGGAAACAAAGGCTGCAA+TGG | - | chr8_4:54087733-54087752 | Msa1333810:intron | 45.0% | |
| AACAAAGGCTGCAATGGAGA+CGG | - | chr8_4:54087739-54087758 | Msa1333810:intron | 45.0% | |
| ! | TGAGAAAGGTGGATTCTCCA+AGG | - | chr8_4:54085834-54085853 | Msa1333810:CDS | 45.0% |
| ! | GAGAAAGGTGGATTCTCCAA+GGG | - | chr8_4:54085835-54085854 | Msa1333810:CDS | 45.0% |
| ! | AGAAAGGTGGATTCTCCAAG+GGG | - | chr8_4:54085836-54085855 | Msa1333810:CDS | 45.0% |
| AGGTTGGAGAGATTGACACA+AGG | - | chr8_4:54085861-54085880 | Msa1333810:CDS | 45.0% | |
| GGTTGGAGAGATTGACACAA+GGG | - | chr8_4:54085862-54085881 | Msa1333810:CDS | 45.0% | |
| ! | GCAGCTTTGACAGATTGGAA+TGG | + | chr8_4:54085890-54085909 | None:intergenic | 45.0% |
| TGGTGAAGTAGCAGTTCCTA+AGG | - | chr8_4:54085922-54085941 | Msa1333810:CDS | 45.0% | |
| TTGACAGCGAATCTGTCCTT+AGG | + | chr8_4:54085941-54085960 | None:intergenic | 45.0% | |
| TGTCAAGAGAAGATCGTCAG+AGG | - | chr8_4:54085955-54085974 | Msa1333810:CDS | 45.0% | |
| AAAGGAGACACAGCTTATCC+TGG | - | chr8_4:54086365-54086384 | Msa1333810:CDS | 45.0% | |
| GCTTGGTTGTCAAACTCTCA+AGG | + | chr8_4:54086485-54086504 | None:intergenic | 45.0% | |
| !! | CGCTTTGATTGCTGATTCCT+TGG | + | chr8_4:54086526-54086545 | None:intergenic | 45.0% |
| GCTGAAGCTGTGAGGAATAA+GGG | - | chr8_4:54086546-54086565 | Msa1333810:CDS | 45.0% | |
| AGAACTCACGAAAATCAGGC+AGG | - | chr8_4:54086689-54086708 | Msa1333810:CDS | 45.0% | |
| GTGCTCTATCGATGCTTTCA+TGG | + | chr8_4:54086829-54086848 | None:intergenic | 45.0% | |
| CGAAACAAGTGCAGAGATTG+AGG | - | chr8_4:54086989-54087008 | Msa1333810:CDS | 45.0% | |
| AACATCCTGCAGTGTCTTTG+TGG | + | chr8_4:54087093-54087112 | None:intergenic | 45.0% | |
| GAAAGAGCAAGATGAGCTGA+AGG | - | chr8_4:54087178-54087197 | Msa1333810:CDS | 45.0% | |
| GATCTTGCTTCTAACCTCAC+TGG | - | chr8_4:54087221-54087240 | Msa1333810:CDS | 45.0% | |
| ! | ATTGAAAAAGAGCGCGGAAG+AGG | - | chr8_4:54087247-54087266 | Msa1333810:CDS | 45.0% |
| GTAGAAGACATTGGCATCCA+CGG | + | chr8_4:54087291-54087310 | None:intergenic | 45.0% | |
| AGCCAAAGAGATGAGCAGAA+AGG | - | chr8_4:54087367-54087386 | Msa1333810:intron | 45.0% | |
| AGCCTTTCTGCTCATCTCTT+TGG | + | chr8_4:54087372-54087391 | None:intergenic | 45.0% | |
| AGCTAACCTGAAAGCTGTTG+AGG | - | chr8_4:54087715-54087734 | Msa1333810:intron | 45.0% | |
| TGAGGAAACAAAGGCTGCAA+TGG | - | chr8_4:54087733-54087752 | Msa1333810:intron | 45.0% | |
| AACAAAGGCTGCAATGGAGA+CGG | - | chr8_4:54087739-54087758 | Msa1333810:intron | 45.0% | |
| TACAAAAGGCCCTCTCGTCA+TGG | - | chr8_4:54086212-54086231 | Msa1333810:CDS | 50.0% | |
| ACAAAAGGCCCTCTCGTCAT+GGG | - | chr8_4:54086213-54086232 | Msa1333810:CDS | 50.0% | |
| AGCACTTTCCGACCTTGAGA+AGG | - | chr8_4:54086449-54086468 | Msa1333810:CDS | 50.0% | |
| CAAACTCTCAAGGGTCTCCT+TGG | + | chr8_4:54086475-54086494 | None:intergenic | 50.0% | |
| GGCTGAAGCTGTGAGGAATA+AGG | - | chr8_4:54086545-54086564 | Msa1333810:CDS | 50.0% | |
| AAGGATCGGTGAACTCTCAG+AGG | - | chr8_4:54086794-54086813 | Msa1333810:CDS | 50.0% | |
| AGAAGCCACAAAGACACTGC+AGG | - | chr8_4:54087085-54087104 | Msa1333810:CDS | 50.0% | |
| CTGTCTCCGATTGTAGCTTC+TGG | + | chr8_4:54087331-54087350 | None:intergenic | 50.0% | |
| AGAGATGAGCAGAAAGGCTC+AGG | - | chr8_4:54087373-54087392 | Msa1333810:intron | 50.0% | |
| CGAGAGTCTACTTTGCACGT+CGG | + | chr8_4:54087531-54087550 | None:intergenic | 50.0% | |
| GCTATCATGGCTGAGTTGCA+AGG | - | chr8_4:54087653-54087672 | Msa1333810:intron | 50.0% | |
| ! | GGCTTTGTGGTATGCAGAGA+TGG | - | chr8_4:54087760-54087779 | Msa1333810:CDS | 50.0% |
| TACAAAAGGCCCTCTCGTCA+TGG | - | chr8_4:54086212-54086231 | Msa1333810:CDS | 50.0% | |
| ACAAAAGGCCCTCTCGTCAT+GGG | - | chr8_4:54086213-54086232 | Msa1333810:CDS | 50.0% | |
| AGCACTTTCCGACCTTGAGA+AGG | - | chr8_4:54086449-54086468 | Msa1333810:CDS | 50.0% | |
| CAAACTCTCAAGGGTCTCCT+TGG | + | chr8_4:54086475-54086494 | None:intergenic | 50.0% | |
| GGCTGAAGCTGTGAGGAATA+AGG | - | chr8_4:54086545-54086564 | Msa1333810:CDS | 50.0% | |
| AAGGATCGGTGAACTCTCAG+AGG | - | chr8_4:54086794-54086813 | Msa1333810:CDS | 50.0% | |
| AGAAGCCACAAAGACACTGC+AGG | - | chr8_4:54087085-54087104 | Msa1333810:CDS | 50.0% | |
| CTGTCTCCGATTGTAGCTTC+TGG | + | chr8_4:54087331-54087350 | None:intergenic | 50.0% | |
| AGAGATGAGCAGAAAGGCTC+AGG | - | chr8_4:54087373-54087392 | Msa1333810:intron | 50.0% | |
| CGAGAGTCTACTTTGCACGT+CGG | + | chr8_4:54087531-54087550 | None:intergenic | 50.0% | |
| GCTATCATGGCTGAGTTGCA+AGG | - | chr8_4:54087653-54087672 | Msa1333810:intron | 50.0% | |
| ! | GGCTTTGTGGTATGCAGAGA+TGG | - | chr8_4:54087760-54087779 | Msa1333810:CDS | 50.0% |
| GATTCTCCAAGGGGAGAGGT+TGG | - | chr8_4:54085845-54085864 | Msa1333810:CDS | 55.0% | |
| ATCTCTCCAACCTCTCCCCT+TGG | + | chr8_4:54085854-54085873 | None:intergenic | 55.0% | |
| TTCCGACCTTGAGAAGGCCA+AGG | - | chr8_4:54086455-54086474 | Msa1333810:CDS | 55.0% | |
| ! | CTCCTTGGCCTTCTCAAGGT+CGG | + | chr8_4:54086460-54086479 | None:intergenic | 55.0% |
| TCAAAGCGGCTGAAGCTGTG+AGG | - | chr8_4:54086538-54086557 | Msa1333810:CDS | 55.0% | |
| ! | GAAAAAGAGCGCGGAAGAGG+CGG | - | chr8_4:54087250-54087269 | Msa1333810:CDS | 55.0% |
| ! | AAAAAGAGCGCGGAAGAGGC+GGG | - | chr8_4:54087251-54087270 | Msa1333810:CDS | 55.0% |
| ACATTGGCATCCACGGTACC+TGG | + | chr8_4:54087284-54087303 | None:intergenic | 55.0% | |
| CTGCAATGGAGACGGCTTTG+TGG | - | chr8_4:54087747-54087766 | Msa1333810:intron | 55.0% | |
| GATTCTCCAAGGGGAGAGGT+TGG | - | chr8_4:54085845-54085864 | Msa1333810:CDS | 55.0% | |
| ATCTCTCCAACCTCTCCCCT+TGG | + | chr8_4:54085854-54085873 | None:intergenic | 55.0% | |
| TTCCGACCTTGAGAAGGCCA+AGG | - | chr8_4:54086455-54086474 | Msa1333810:CDS | 55.0% | |
| ! | CTCCTTGGCCTTCTCAAGGT+CGG | + | chr8_4:54086460-54086479 | None:intergenic | 55.0% |
| TCAAAGCGGCTGAAGCTGTG+AGG | - | chr8_4:54086538-54086557 | Msa1333810:CDS | 55.0% | |
| ! | GAAAAAGAGCGCGGAAGAGG+CGG | - | chr8_4:54087250-54087269 | Msa1333810:CDS | 55.0% |
| ! | AAAAAGAGCGCGGAAGAGGC+GGG | - | chr8_4:54087251-54087270 | Msa1333810:CDS | 55.0% |
| ACATTGGCATCCACGGTACC+TGG | + | chr8_4:54087284-54087303 | None:intergenic | 55.0% | |
| CTGCAATGGAGACGGCTTTG+TGG | - | chr8_4:54087747-54087766 | Msa1333810:intron | 55.0% | |
| ! | GGTGGATTCTCCAAGGGGAG+AGG | - | chr8_4:54085841-54085860 | Msa1333810:CDS | 60.0% |
| ! | GGGTCTCCTTGGCCTTCTCA+AGG | + | chr8_4:54086464-54086483 | None:intergenic | 60.0% |
| GGCAAAGCTAGCAGCACTGC+AGG | - | chr8_4:54086731-54086750 | Msa1333810:CDS | 60.0% | |
| CTAGCAGCACTGCAGGCAAC+AGG | - | chr8_4:54086738-54086757 | Msa1333810:CDS | 60.0% | |
| ! | AAAAGAGCGCGGAAGAGGCG+GGG | - | chr8_4:54087252-54087271 | Msa1333810:CDS | 60.0% |
| ! | AGCTGAAGCATCCCGAGCAG+CGG | - | chr8_4:54087409-54087428 | Msa1333810:intron | 60.0% |
| TGCTTCTTCAGCCGCTGCTC+GGG | + | chr8_4:54087423-54087442 | None:intergenic | 60.0% | |
| CTGCTTCTTCAGCCGCTGCT+CGG | + | chr8_4:54087424-54087443 | None:intergenic | 60.0% | |
| ! | GGTGGATTCTCCAAGGGGAG+AGG | - | chr8_4:54085841-54085860 | Msa1333810:CDS | 60.0% |
| ! | GGGTCTCCTTGGCCTTCTCA+AGG | + | chr8_4:54086464-54086483 | None:intergenic | 60.0% |
| GGCAAAGCTAGCAGCACTGC+AGG | - | chr8_4:54086731-54086750 | Msa1333810:CDS | 60.0% | |
| CTAGCAGCACTGCAGGCAAC+AGG | - | chr8_4:54086738-54086757 | Msa1333810:CDS | 60.0% | |
| ! | AAAAGAGCGCGGAAGAGGCG+GGG | - | chr8_4:54087252-54087271 | Msa1333810:CDS | 60.0% |
| ! | AGCTGAAGCATCCCGAGCAG+CGG | - | chr8_4:54087409-54087428 | Msa1333810:intron | 60.0% |
| TGCTTCTTCAGCCGCTGCTC+GGG | + | chr8_4:54087423-54087442 | None:intergenic | 60.0% | |
| CTGCTTCTTCAGCCGCTGCT+CGG | + | chr8_4:54087424-54087443 | None:intergenic | 60.0% | |
| GCATCCACGGTACCTGGCTG+AGG | + | chr8_4:54087278-54087297 | None:intergenic | 65.0% | |
| GCATCCACGGTACCTGGCTG+AGG | + | chr8_4:54087278-54087297 | None:intergenic | 65.0% | |
| GAAGAGGCGGGGCCTCAGCC+AGG | - | chr8_4:54087263-54087282 | Msa1333810:CDS | 75.0% | |
| ! | GGGGCCTCAGCCAGGTACCG+TGG | - | chr8_4:54087271-54087290 | Msa1333810:CDS | 75.0% |
| GAAGAGGCGGGGCCTCAGCC+AGG | - | chr8_4:54087263-54087282 | Msa1333810:CDS | 75.0% | |
| ! | GGGGCCTCAGCCAGGTACCG+TGG | - | chr8_4:54087271-54087290 | Msa1333810:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 54085833 | 54087895 | 54085833 | ID=Msa1333810;Name=Msa1333810 |
| chr8_4 | mRNA | 54085833 | 54087895 | 54085833 | ID=Msa1333810-mRNA-1;Parent=Msa1333810;Name=Msa1333810-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|561 |
| chr8_4 | exon | 54087752 | 54087895 | 54087752 | ID=Msa1333810-mRNA-1:exon:16773;Parent=Msa1333810-mRNA-1 |
| chr8_4 | exon | 54085833 | 54087374 | 54085833 | ID=Msa1333810-mRNA-1:exon:16772;Parent=Msa1333810-mRNA-1 |
| chr8_4 | CDS | 54087752 | 54087895 | 54087752 | ID=Msa1333810-mRNA-1:cds;Parent=Msa1333810-mRNA-1 |
| chr8_4 | CDS | 54085833 | 54087374 | 54085833 | ID=Msa1333810-mRNA-1:cds;Parent=Msa1333810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
