Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382180 | XP_003603233.2 | 95.614 | 114 | 5 | 0 | 1 | 114 | 1 | 114 | 5.75e-75 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382180 | G7J943 | 95.614 | 114 | 5 | 0 | 1 | 114 | 1 | 114 | 2.74e-75 | 234 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042920 | Msa0382180 | 0.802636 | 5.106733e-49 | -8.615850e-47 |
| Msa0043980 | Msa0382180 | 0.815159 | 1.066198e-51 | -8.615850e-47 |
| Msa0058490 | Msa0382180 | 0.822852 | 1.897582e-53 | -8.615850e-47 |
| Msa0058510 | Msa0382180 | 0.825351 | 4.916392e-54 | -8.615850e-47 |
| Msa0108560 | Msa0382180 | 0.805502 | 1.294118e-49 | -8.615850e-47 |
| Msa0117770 | Msa0382180 | 0.802212 | 6.245562e-49 | -8.615850e-47 |
| Msa0143930 | Msa0382180 | 0.805548 | 1.265925e-49 | -8.615850e-47 |
| Msa0153830 | Msa0382180 | 0.811845 | 5.711587e-51 | -8.615850e-47 |
| Msa0205510 | Msa0382180 | 0.808793 | 2.601284e-50 | -8.615850e-47 |
| Msa0206010 | Msa0382180 | 0.808020 | 3.803055e-50 | -8.615850e-47 |
| Msa0216530 | Msa0382180 | 0.800267 | 1.561329e-48 | -8.615850e-47 |
| Msa0223010 | Msa0382180 | 0.821273 | 4.408443e-53 | -8.615850e-47 |
| Msa0233300 | Msa0382180 | 0.825678 | 4.112688e-54 | -8.615850e-47 |
| Msa0236630 | Msa0382180 | 0.800681 | 1.285625e-48 | -8.615850e-47 |
| Msa0376910 | Msa0382180 | 0.807787 | 4.261354e-50 | -8.615850e-47 |
| Msa0379640 | Msa0382180 | 0.825545 | 4.420914e-54 | -8.615850e-47 |
| Msa0382180 | Msa0385840 | 0.804794 | 1.820720e-49 | -8.615850e-47 |
| Msa0382180 | Msa0431690 | 0.863851 | 1.852486e-64 | -8.615850e-47 |
| Msa0382180 | Msa0471900 | 0.811740 | 6.019766e-51 | -8.615850e-47 |
| Msa0382180 | Msa0484780 | 0.807767 | 4.303351e-50 | -8.615850e-47 |
| Msa0382180 | Msa0512900 | 0.825758 | 3.936413e-54 | -8.615850e-47 |
| Msa0382180 | Msa0536220 | 0.810244 | 1.269511e-50 | -8.615850e-47 |
| Msa0382180 | Msa0575470 | 0.800864 | 1.179777e-48 | -8.615850e-47 |
| Msa0382180 | Msa0599890 | 0.801603 | 8.328547e-49 | -8.615850e-47 |
| Msa0382180 | Msa0608160 | 0.808181 | 3.514199e-50 | -8.615850e-47 |
| Msa0382180 | Msa0612930 | 0.806108 | 9.652569e-50 | -8.615850e-47 |
| Msa0382180 | Msa0648080 | 0.813297 | 2.748791e-51 | -8.615850e-47 |
| Msa0382180 | Msa0659400 | 0.824211 | 9.125234e-54 | -8.615850e-47 |
| Msa0382180 | Msa0672690 | 0.804627 | 1.972497e-49 | -8.615850e-47 |
| Msa0382180 | Msa0731180 | 0.813947 | 1.977966e-51 | -8.615850e-47 |
| Msa0382180 | Msa0810220 | 0.803416 | 3.522662e-49 | -8.615850e-47 |
| Msa0382180 | Msa0832150 | 0.800288 | 1.545950e-48 | -8.615850e-47 |
| Msa0382180 | Msa0857640 | 0.801982 | 6.963005e-49 | -8.615850e-47 |
| Msa0382180 | Msa0931520 | 0.808843 | 2.537456e-50 | -8.615850e-47 |
| Msa0382180 | Msa0933100 | 0.816560 | 5.194165e-52 | -8.615850e-47 |
| Msa0382180 | Msa0969520 | 0.803581 | 3.255314e-49 | -8.615850e-47 |
| Msa0382180 | Msa0974930 | 0.804159 | 2.469536e-49 | -8.615850e-47 |
| Msa0382180 | Msa1039800 | 0.804859 | 1.764141e-49 | -8.615850e-47 |
| Msa0382180 | Msa1044420 | 0.800554 | 1.365120e-48 | -8.615850e-47 |
| Msa0382180 | Msa1058750 | 0.809518 | 1.819142e-50 | -8.615850e-47 |
| Msa0382180 | Msa1081590 | 0.807660 | 4.535782e-50 | -8.615850e-47 |
| Msa0382180 | Msa1082500 | 0.811725 | 6.063831e-51 | -8.615850e-47 |
| Msa0382180 | Msa1082580 | 0.810074 | 1.381327e-50 | -8.615850e-47 |
| Msa0382180 | Msa1114410 | 0.814058 | 1.869243e-51 | -8.615850e-47 |
| Msa0382180 | Msa1119480 | 0.813705 | 2.235806e-51 | -8.615850e-47 |
| Msa0382180 | Msa1131220 | 0.814640 | 1.389741e-51 | -8.615850e-47 |
| Msa0382180 | Msa1174040 | 0.827210 | 1.774674e-54 | -8.615850e-47 |
| Msa0382180 | Msa1181800 | 0.807653 | 4.550453e-50 | -8.615850e-47 |
| Msa0382180 | Msa1190930 | 0.802022 | 6.832227e-49 | -8.615850e-47 |
| Msa0382180 | Msa1212940 | 0.807171 | 5.759096e-50 | -8.615850e-47 |
| Msa0382180 | Msa1225130 | 0.800908 | 1.155655e-48 | -8.615850e-47 |
| Msa0382180 | Msa1233890 | 0.807717 | 4.410558e-50 | -8.615850e-47 |
| Msa0382180 | Msa1247250 | 0.810944 | 8.959758e-51 | -8.615850e-47 |
| Msa0382180 | Msa1257600 | 0.802393 | 5.731616e-49 | -8.615850e-47 |
| Msa0382180 | Msa1292400 | 0.822581 | 2.194445e-53 | -8.615850e-47 |
| Msa0382180 | Msa1305190 | 0.822242 | 2.630639e-53 | -8.615850e-47 |
| Msa0382180 | Msa1305340 | 0.847570 | 1.063749e-59 | -8.615850e-47 |
| Msa0382180 | Msa1333810 | 0.801031 | 1.090728e-48 | -8.615850e-47 |
| Msa0382180 | Msa1366220 | 0.808859 | 2.517404e-50 | -8.615850e-47 |
| Msa0382180 | Msa1393040 | 0.804375 | 2.226135e-49 | -8.615850e-47 |
| Msa0382180 | Msa1397120 | 0.836199 | 1.076495e-56 | -8.615850e-47 |
| Msa0382180 | Msa1403890 | 0.831635 | 1.492702e-55 | -8.615850e-47 |
| Msa0382180 | Msa1404550 | 0.801519 | 8.667901e-49 | -8.615850e-47 |
| Msa0382180 | Msa1407600 | 0.824197 | 9.195570e-54 | -8.615850e-47 |
| Msa0382180 | Msa1411020 | 0.804163 | 2.464961e-49 | -8.615850e-47 |
| Msa0382180 | Msa1420490 | 0.804324 | 2.282015e-49 | -8.615850e-47 |
| Msa0382180 | Msa1423390 | 0.802436 | 5.615527e-49 | -8.615850e-47 |
| Msa0382180 | Msa1424290 | 0.801690 | 7.992346e-49 | -8.615850e-47 |
| Msa0382180 | Msa1427230 | 0.819157 | 1.345783e-52 | -8.615850e-47 |
| Msa0382180 | Msa1434350 | 0.801322 | 9.509233e-49 | -8.615850e-47 |
| Msa0382180 | Msa1439320 | 0.804844 | 1.777027e-49 | -8.615850e-47 |
| Msa0382180 | Msa1440370 | 0.803461 | 3.448676e-49 | -8.615850e-47 |
| Msa0382180 | Msa1440810 | 0.808692 | 2.733473e-50 | -8.615850e-47 |
| Msa0382180 | Msa1451620 | -0.808688 | 2.738691e-50 | -8.615850e-47 |
| Msa0382180 | Msa1459950 | 0.821550 | 3.803338e-53 | -8.615850e-47 |
| Msa0382180 | Msa1460050 | 0.813276 | 2.777944e-51 | -8.615850e-47 |
| Msa0382180 | Msa1460830 | 0.822245 | 2.626820e-53 | -8.615850e-47 |
| Msa0382180 | Msa1464940 | 0.804794 | 1.820235e-49 | -8.615850e-47 |
| Msa0382180 | Msa1466540 | 0.802334 | 5.894114e-49 | -8.615850e-47 |
| Msa0287410 | Msa0382180 | 0.810890 | 9.205463e-51 | -8.615850e-47 |
| Msa0288100 | Msa0382180 | 0.812340 | 4.452902e-51 | -8.615850e-47 |
| Msa0315290 | Msa0382180 | 0.828034 | 1.124704e-54 | -8.615850e-47 |
| Msa0319170 | Msa0382180 | 0.800836 | 1.195511e-48 | -8.615850e-47 |
| Msa0326110 | Msa0382180 | 0.812367 | 4.393182e-51 | -8.615850e-47 |
| Msa0339620 | Msa0382180 | 0.815585 | 8.573650e-52 | -8.615850e-47 |
| Msa0344910 | Msa0382180 | 0.925164 | 2.658526e-90 | -8.615850e-47 |
| Msa0344980 | Msa0382180 | 0.895697 | 7.488416e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382180 | MtrunA17_Chr3g0136441 | 95.614 | 114 | 5 | 0 | 1 | 114 | 1 | 114 | 5.28e-79 | 234 |
| Msa0382180 | MtrunA17_Chr1g0150711 | 56.000 | 100 | 41 | 1 | 12 | 108 | 17 | 116 | 2.07e-33 | 119 |
| Msa0382180 | MtrunA17_Chr8g0344381 | 54.639 | 97 | 42 | 1 | 7 | 101 | 26 | 122 | 3.53e-33 | 118 |
| Msa0382180 | MtrunA17_Chr4g0070351 | 55.102 | 98 | 42 | 1 | 10 | 105 | 29 | 126 | 8.34e-31 | 111 |
| Msa0382180 | MtrunA17_Chr4g0070371 | 48.113 | 106 | 50 | 2 | 4 | 105 | 17 | 121 | 3.72e-26 | 100 |
| Msa0382180 | MtrunA17_Chr5g0394601 | 47.297 | 74 | 38 | 1 | 10 | 82 | 1 | 74 | 2.06e-21 | 86.7 |
| Msa0382180 | MtrunA17_Chr2g0331111 | 52.778 | 72 | 33 | 1 | 1 | 72 | 52 | 122 | 6.04e-20 | 85.1 |
| Msa0382180 | MtrunA17_Chr8g0340421 | 57.143 | 63 | 26 | 1 | 11 | 73 | 62 | 123 | 8.57e-20 | 84.7 |
| Msa0382180 | MtrunA17_Chr1g0205251 | 45.946 | 74 | 38 | 2 | 10 | 81 | 1 | 74 | 2.16e-18 | 79.0 |
| Msa0382180 | MtrunA17_Chr3g0140381 | 38.710 | 93 | 56 | 1 | 11 | 102 | 36 | 128 | 2.81e-18 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382180 | AT1G72510.1 | 57.447 | 94 | 38 | 1 | 14 | 105 | 36 | 129 | 4.28e-33 | 119 |
| Msa0382180 | AT1G72510.2 | 57.447 | 94 | 38 | 1 | 14 | 105 | 36 | 129 | 4.28e-33 | 119 |
| Msa0382180 | AT2G09970.1 | 49.000 | 100 | 44 | 3 | 11 | 105 | 33 | 130 | 7.16e-26 | 100 |
| Msa0382180 | AT5G20670.1 | 47.959 | 98 | 46 | 3 | 12 | 106 | 23 | 118 | 6.66e-22 | 89.7 |
| Msa0382180 | AT1G54095.1 | 45.714 | 105 | 50 | 4 | 1 | 101 | 6 | 107 | 4.42e-20 | 84.7 |
| Msa0382180 | AT4G14819.1 | 41.772 | 79 | 44 | 1 | 10 | 88 | 1 | 77 | 1.37e-17 | 76.6 |
| Msa0382180 | AT3G22540.1 | 38.462 | 91 | 51 | 3 | 10 | 99 | 1 | 87 | 6.69e-17 | 75.1 |
| Msa0382180 | AT1G79770.1 | 43.878 | 98 | 47 | 3 | 7 | 100 | 47 | 140 | 7.00e-15 | 71.2 |
| Msa0382180 | AT5G25840.1 | 42.391 | 92 | 38 | 3 | 3 | 82 | 34 | 122 | 5.69e-13 | 65.9 |
| Msa0382180 | AT2G25780.1 | 38.202 | 89 | 51 | 3 | 15 | 100 | 39 | 126 | 1.23e-11 | 62.0 |
Find 63 sgRNAs with CRISPR-Local
Find 512 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAAACACCTACGAGTTTC+AGG | 0.227738 | 3_1:-84639668 | Msa0382180:intron |
| GTTAAGCGTTGTGCCTTAAT+TGG | 0.243640 | 3_1:+84632270 | None:intergenic |
| AAATCAACCGTAGGTTTATT+AGG | 0.246906 | 3_1:+84640819 | None:intergenic |
| CTCCATCGTCGCCGCGGTTT+CGG | 0.297193 | 3_1:+84641052 | None:intergenic |
| CTCATAATCCTGCAGGTTAC+CGG | 0.316611 | 3_1:+84635439 | None:intergenic |
| ATCATCAACAAAGCCAATTA+AGG | 0.323428 | 3_1:-84632283 | Msa0382180:CDS |
| GGTCCTTGAACTATTGTTGC+TGG | 0.325788 | 3_1:-84639698 | Msa0382180:CDS |
| GCCATCTCCACTAGAATTGC+AGG | 0.356093 | 3_1:-84635374 | Msa0382180:intron |
| TTTCAAAGCTTCTTCTTTCA+CGG | 0.372656 | 3_1:+84640914 | None:intergenic |
| TACCTGGGTCGTTGGATTTG+TGG | 0.383506 | 3_1:-84640951 | Msa0382180:CDS |
| ACCTGGGTCGTTGGATTTGT+GGG | 0.391134 | 3_1:-84640950 | Msa0382180:CDS |
| GTGCTACTGTTGCGGCTTAA+CGG | 0.404880 | 3_1:-84641015 | Msa0382180:CDS |
| TCTTGTGCTTCTGTCCATGA+TGG | 0.435089 | 3_1:+84632154 | None:intergenic |
| TTGTTGTTGTGCTTCTGTCA+TGG | 0.442334 | 3_1:+84632184 | None:intergenic |
| TACATATAGTTTCTGCTTGG+TGG | 0.448254 | 3_1:+84632248 | None:intergenic |
| TTGATGATTGCTTCTGCCAA+TGG | 0.476179 | 3_1:+84632298 | None:intergenic |
| AAACGACGCTTAACCATCCT+TGG | 0.477559 | 3_1:-84632120 | Msa0382180:CDS |
| AAACTCAAAGGTTGTTTCCT+CGG | 0.484002 | 3_1:+84640753 | None:intergenic |
| CCATGTTCGTGAGAAATACC+TGG | 0.494919 | 3_1:-84640967 | Msa0382180:CDS |
| GCCGCAACAGTAGCACTTCA+CGG | 0.509628 | 3_1:+84641022 | None:intergenic |
| AAGCGCTGTGCTTCTGTCCA+AGG | 0.511625 | 3_1:+84632103 | None:intergenic |
| CTTTACATATAGTTTCTGCT+TGG | 0.511775 | 3_1:+84632245 | None:intergenic |
| TGTTGTGCTTCTGTCATGGA+TGG | 0.530022 | 3_1:+84632188 | None:intergenic |
| ACCTGCAATTCTAGTGGAGA+TGG | 0.531939 | 3_1:+84635373 | None:intergenic |
| TGATACAACGTCCTTGGTGC+CGG | 0.535408 | 3_1:-84635516 | Msa0382180:CDS |
| TAATCCTGCAGGTTACCGGC+TGG | 0.539939 | 3_1:+84635443 | None:intergenic |
| ACAACTGCTCATAATCCTGC+AGG | 0.542530 | 3_1:+84635432 | None:intergenic |
| GTGAGAAATACCTGGGTCGT+TGG | 0.543743 | 3_1:-84640959 | Msa0382180:CDS |
| ATGCCAGCAACAATAGTTCA+AGG | 0.545750 | 3_1:+84639695 | None:intergenic |
| GTTGTCTGATACAACGTCCT+TGG | 0.545853 | 3_1:-84635522 | Msa0382180:CDS |
| GTTGTTGTGCTTCTGCTAAG+TGG | 0.548076 | 3_1:+84632217 | None:intergenic |
| GTGTTGATTAAGAGCTTCAT+CGG | 0.550067 | 3_1:+84640872 | None:intergenic |
| ACAACAAGGCTTAACCATCA+TGG | 0.558077 | 3_1:-84632168 | Msa0382180:CDS |
| AATCAACGCTTAACCACCAT+TGG | 0.560795 | 3_1:-84632314 | Msa0382180:CDS |
| TGGACAGAAGCACAAGAAGA+AGG | 0.562028 | 3_1:-84632148 | Msa0382180:CDS |
| TAAGTATGTTTACATGATGC+CGG | 0.562707 | 3_1:+84635497 | None:intergenic |
| AACCGCGGCGACGATGGAGG+TGG | 0.571492 | 3_1:-84641048 | Msa0382180:CDS |
| GCAGGATTATGAGCAGTTGT+CGG | 0.578296 | 3_1:-84635429 | Msa0382180:CDS |
| AACCGAAACCGCGGCGACGA+TGG | 0.582114 | 3_1:-84641054 | Msa0382180:CDS |
| CCGCTAACCTGCAATTCTAG+TGG | 0.582782 | 3_1:+84635367 | None:intergenic |
| ATGATTGCTTCTGCCAATGG+TGG | 0.583074 | 3_1:+84632301 | None:intergenic |
| AAGTCCTCCTAATAAACCTA+CGG | 0.601557 | 3_1:-84640826 | Msa0382180:CDS |
| CTTATCCAGAAAGTCGTCGC+CGG | 0.602877 | 3_1:-84635478 | Msa0382180:CDS |
| TCAACCGTAGGTTTATTAGG+AGG | 0.609122 | 3_1:+84640822 | None:intergenic |
| AAACTCGTAGGTGTTTGTAA+TGG | 0.609218 | 3_1:+84639672 | None:intergenic |
| CCAGGTATTTCTCACGAACA+TGG | 0.611108 | 3_1:+84640967 | None:intergenic |
| TTCGGTCTTTGGATTCTCCG+AGG | 0.613420 | 3_1:-84640770 | Msa0382180:CDS |
| CGAAACCGCGGCGACGATGG+AGG | 0.615356 | 3_1:-84641051 | Msa0382180:CDS |
| GCTGTGCTTCTGTCCAAGGA+TGG | 0.619475 | 3_1:+84632107 | None:intergenic |
| GCCCACAAATCCAACGACCC+AGG | 0.634250 | 3_1:+84640949 | None:intergenic |
| CCAACCGTTCGAAAACTCAA+AGG | 0.637318 | 3_1:+84640741 | None:intergenic |
| CAGTTGTCGGCGAATTCTAG+CGG | 0.639094 | 3_1:-84635416 | Msa0382180:CDS |
| GCAAGAATCAAATCAACCGT+AGG | 0.641034 | 3_1:+84640810 | None:intergenic |
| CATGTTCGTGAGAAATACCT+GGG | 0.642264 | 3_1:-84640966 | Msa0382180:CDS |
| TTTACATGATGCCGGCACCA+AGG | 0.642699 | 3_1:+84635505 | None:intergenic |
| GATTTGTGGGCTATGTGCAG+AGG | 0.661005 | 3_1:-84640937 | Msa0382180:CDS |
| ATGACAGAAGCACAACAACA+AGG | 0.667021 | 3_1:-84632182 | Msa0382180:CDS |
| GCCGTGAAGTGCTACTGTTG+CGG | 0.673482 | 3_1:-84641023 | Msa0382180:CDS |
| CTACTGTTGCGGCTTAACGG+AGG | 0.677501 | 3_1:-84641012 | Msa0382180:CDS |
| TACCACCTCCATCGTCGCCG+CGG | 0.680469 | 3_1:+84641046 | None:intergenic |
| TTCAAGGACCTGAAACTCGT+AGG | 0.689749 | 3_1:+84639660 | None:intergenic |
| GATGGCTTTAACCGAAACCG+CGG | 0.711918 | 3_1:-84641063 | Msa0382180:CDS |
| CGAACATGGTCAATATACGA+CGG | 0.745897 | 3_1:+84640981 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTAATATTTTAATTTTT+TGG | - | chr3_1:84636261-84636280 | Msa0382180:intron | 0.0% |
| !! | AATAGTATATATATAAAGTA+AGG | - | chr3_1:84632904-84632923 | Msa0382180:intron | 10.0% |
| !! | AAAAAGAAAGAAAAAAATAA+AGG | + | chr3_1:84633149-84633168 | None:intergenic | 10.0% |
| !!! | TTTTTTTCTTTCTTTTTTTT+AGG | - | chr3_1:84633152-84633171 | Msa0382180:intron | 10.0% |
| !!! | ATTTTTATATATAATATGAG+AGG | - | chr3_1:84633384-84633403 | Msa0382180:intron | 10.0% |
| !!! | TTTTTATATATAATATGAGA+GGG | - | chr3_1:84633385-84633404 | Msa0382180:intron | 10.0% |
| !! | AAAAAAGAAAAAAAAACAAT+CGG | + | chr3_1:84633435-84633454 | None:intergenic | 10.0% |
| !!! | GATTTTAATAATAATATTTC+AGG | - | chr3_1:84633699-84633718 | Msa0382180:intron | 10.0% |
| !! | AATAGTATATATATAAAGTA+AGG | - | chr3_1:84632904-84632923 | Msa0382180:intron | 10.0% |
| !! | AATAGTATATATATAAAGTA+AGG | - | chr3_1:84632904-84632923 | Msa0382180:intron | 10.0% |
| !!! | AAAGTTTGATTTTATTTTAT+AGG | - | chr3_1:84634278-84634297 | Msa0382180:intron | 10.0% |
| !!! | AAGTTTGATTTTATTTTATA+GGG | - | chr3_1:84634279-84634298 | Msa0382180:intron | 10.0% |
| !! | TTAAATATCTTAAATATTGT+TGG | + | chr3_1:84636201-84636220 | None:intergenic | 10.0% |
| !! | TTAATGAAATAATTATTCAT+GGG | + | chr3_1:84636989-84637008 | None:intergenic | 10.0% |
| !! | ATTAATGAAATAATTATTCA+TGG | + | chr3_1:84636990-84637009 | None:intergenic | 10.0% |
| !! | AAAAATTAAACAAAATGTTA+CGG | + | chr3_1:84637432-84637451 | None:intergenic | 10.0% |
| !!! | ATTTTAAAATAAAACAATTG+TGG | + | chr3_1:84639154-84639173 | None:intergenic | 10.0% |
| !! | AAAAATAAAGGAAGATTTAA+TGG | + | chr3_1:84633137-84633156 | None:intergenic | 15.0% |
| !! | AGTAAAAGAAACAATATTAT+AGG | + | chr3_1:84633349-84633368 | None:intergenic | 15.0% |
| !!! | TTTTCTTTTTTTTTTCTTTC+AGG | - | chr3_1:84633444-84633463 | Msa0382180:intron | 15.0% |
| !! | TTAATAATATTGAAACGAAA+AGG | + | chr3_1:84633666-84633685 | None:intergenic | 15.0% |
| !!! | AAGTGTGATTATATTTTATA+GGG | + | chr3_1:84634121-84634140 | None:intergenic | 15.0% |
| !!! | AAAGTGTGATTATATTTTAT+AGG | + | chr3_1:84634122-84634141 | None:intergenic | 15.0% |
| !!! | GCTAATGAAATTTTTTTATA+GGG | + | chr3_1:84634181-84634200 | None:intergenic | 15.0% |
| !!! | TGCTAATGAAATTTTTTTAT+AGG | + | chr3_1:84634182-84634201 | None:intergenic | 15.0% |
| !!! | ATTTCTAATATTTTATGTAG+CGG | - | chr3_1:84634427-84634446 | Msa0382180:intron | 15.0% |
| !! | AATGTATCTAGTTAAAAAAT+TGG | + | chr3_1:84635589-84635608 | None:intergenic | 15.0% |
| !! | TAAAATGTAAATGACATAAA+AGG | - | chr3_1:84636122-84636141 | Msa0382180:intron | 15.0% |
| !!! | AACTAGATATTTTTTTTTCA+TGG | - | chr3_1:84636568-84636587 | Msa0382180:intron | 15.0% |
| !! | GAATTAAATAAGTATTCAAT+TGG | + | chr3_1:84636603-84636622 | None:intergenic | 15.0% |
| !!! | TATAAATAGTCTTTTTCTTA+CGG | + | chr3_1:84636691-84636710 | None:intergenic | 15.0% |
| !! | AAATATTATGTGACAAAAAA+AGG | - | chr3_1:84636729-84636748 | Msa0382180:intron | 15.0% |
| !!! | ATAATATTTTTTATGCCAAA+AGG | - | chr3_1:84637008-84637027 | Msa0382180:intron | 15.0% |
| !!! | TAATTTGTAATTGTTGTTTT+TGG | + | chr3_1:84637514-84637533 | None:intergenic | 15.0% |
| !! | ATAATAAATAAGTATGACAT+CGG | - | chr3_1:84637980-84637999 | Msa0382180:intron | 15.0% |
| !!! | AATATCTGTTAATTATTTTG+TGG | - | chr3_1:84638011-84638030 | Msa0382180:intron | 15.0% |
| !!! | ATATCTGTTAATTATTTTGT+GGG | - | chr3_1:84638012-84638031 | Msa0382180:intron | 15.0% |
| !! | AAACAAAAATTAACAAGAAA+TGG | + | chr3_1:84638099-84638118 | None:intergenic | 15.0% |
| !! | AATGTTTGAATTGATATTAA+AGG | - | chr3_1:84638776-84638795 | Msa0382180:intron | 15.0% |
| !!! | TAATCTAAAACTAAATAGTA+GGG | + | chr3_1:84639124-84639143 | None:intergenic | 15.0% |
| !!! | AAGAATCTTTTCTTATATAT+AGG | - | chr3_1:84639367-84639386 | Msa0382180:intron | 15.0% |
| !! | ACAAATTATAACTATACAAT+TGG | - | chr3_1:84639573-84639592 | Msa0382180:intron | 15.0% |
| !! | CAAATTATAACTATACAATT+GGG | - | chr3_1:84639574-84639593 | Msa0382180:intron | 15.0% |
| !! | AAAAATATTGAGAATAAACG+TGG | + | chr3_1:84632952-84632971 | None:intergenic | 20.0% |
| !!! | TATAGTTTGTTGAGATATTT+TGG | + | chr3_1:84633094-84633113 | None:intergenic | 20.0% |
| !!! | TTCAATTAGTTTTTTCATTG+AGG | - | chr3_1:84633184-84633203 | Msa0382180:intron | 20.0% |
| !! | AAAAATATTGAGAATGAATG+TGG | + | chr3_1:84633787-84633806 | None:intergenic | 20.0% |
| !! | AAAAATATTGAGAATGAATG+TGG | + | chr3_1:84633787-84633806 | None:intergenic | 20.0% |
| !!! | GTTGATGGAAATTTTTTATA+GGG | + | chr3_1:84634213-84634232 | None:intergenic | 20.0% |
| !!! | TGTTGATGGAAATTTTTTAT+AGG | + | chr3_1:84634214-84634233 | None:intergenic | 20.0% |
| !!! | AAAATTTCCATCAACATTTT+TGG | - | chr3_1:84634218-84634237 | Msa0382180:intron | 20.0% |
| !! | ACAAAATGGTGAATATTTAT+AGG | - | chr3_1:84634309-84634328 | Msa0382180:intron | 20.0% |
| !! | CAAAATGGTGAATATTTATA+GGG | - | chr3_1:84634310-84634329 | Msa0382180:intron | 20.0% |
| !! | AACTTATTTAATATCTAACC+CGG | - | chr3_1:84634762-84634781 | Msa0382180:intron | 20.0% |
| !! | AATGTTTAGATATCAGTAAA+AGG | - | chr3_1:84634840-84634859 | Msa0382180:intron | 20.0% |
| !! | ATGTTTAGATATCAGTAAAA+GGG | - | chr3_1:84634841-84634860 | Msa0382180:intron | 20.0% |
| !! | AAATAAATTGAAGTAAACCA+AGG | + | chr3_1:84634955-84634974 | None:intergenic | 20.0% |
| !!! | TGGTTTACTTCAATTTATTT+TGG | - | chr3_1:84634955-84634974 | Msa0382180:intron | 20.0% |
| !!! | TTTTGGATTTTGTTTTGTAT+TGG | - | chr3_1:84634972-84634991 | Msa0382180:intron | 20.0% |
| !! | TTTATACTACTATTACTCTT+TGG | - | chr3_1:84635269-84635288 | Msa0382180:intron | 20.0% |
| !! | TTCAACATATATGATAAAAG+AGG | - | chr3_1:84635399-84635418 | Msa0382180:CDS | 20.0% |
| !! | TCAACATATATGATAAAAGA+GGG | - | chr3_1:84635400-84635419 | Msa0382180:CDS | 20.0% |
| !! | ATATTAATGCTAATAGAAGA+CGG | - | chr3_1:84635461-84635480 | Msa0382180:CDS | 20.0% |
| !! | CTCAAATTTCTCTTATAAAT+AGG | + | chr3_1:84635542-84635561 | None:intergenic | 20.0% |
| !! | CCTATTTATAAGAGAAATTT+GGG | + | chr3_1:84635539-84635558 | None:intergenic | 20.0% |
| !! | TCCTATTTATAAGAGAAATT+TGG | + | chr3_1:84635538-84635557 | None:intergenic | 20.0% |
| !!! | CATGTTGAACATTTTTTTTA+AGG | + | chr3_1:84635740-84635759 | None:intergenic | 20.0% |
| !! | TATTCGCTAAAAAAATCAAT+TGG | + | chr3_1:84635841-84635860 | None:intergenic | 20.0% |
| !! | TCTAAAGGTTAAAAAAGAAT+TGG | + | chr3_1:84636038-84636057 | None:intergenic | 20.0% |
| !!! | CATTTTATTATGTAGTTGAT+GGG | + | chr3_1:84636109-84636128 | None:intergenic | 20.0% |
| !!! | ACATTTTATTATGTAGTTGA+TGG | + | chr3_1:84636110-84636129 | None:intergenic | 20.0% |
| !!! | TTTTAGACCATAATAAGATT+TGG | - | chr3_1:84636805-84636824 | Msa0382180:intron | 20.0% |
| !!! | TGTGTTAATTCCATTTTATA+AGG | + | chr3_1:84637111-84637130 | None:intergenic | 20.0% |
| !! | ATAATCTTCATTTGATCTAA+TGG | + | chr3_1:84637269-84637288 | None:intergenic | 20.0% |
| !! | AGTGTAAAAATAATATAGTG+TGG | + | chr3_1:84637310-84637329 | None:intergenic | 20.0% |
| !! | GAAATAAAAGCAAAAATCAA+AGG | - | chr3_1:84637571-84637590 | Msa0382180:intron | 20.0% |
| !! | ATTAGAAAACGATGTATATT+TGG | - | chr3_1:84638158-84638177 | Msa0382180:intron | 20.0% |
| !!! | TGAATTGATATTAAAGGTTT+TGG | - | chr3_1:84638782-84638801 | Msa0382180:intron | 20.0% |
| !!! | GAATTGATATTAAAGGTTTT+GGG | - | chr3_1:84638783-84638802 | Msa0382180:intron | 20.0% |
| !!! | TAAGAAAAGTGTATAAATGA+AGG | - | chr3_1:84638948-84638967 | Msa0382180:intron | 20.0% |
| !!! | AAGAAAAGTGTATAAATGAA+GGG | - | chr3_1:84638949-84638968 | Msa0382180:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr3_1:84639042-84639061 | Msa0382180:intron | 20.0% |
| !!! | AATCTAAAACTAAATAGTAG+GGG | + | chr3_1:84639123-84639142 | None:intergenic | 20.0% |
| !!! | GTAATCTAAAACTAAATAGT+AGG | + | chr3_1:84639125-84639144 | None:intergenic | 20.0% |
| !! | TGTAATTATGTTGTATAATG+AGG | + | chr3_1:84639219-84639238 | None:intergenic | 20.0% |
| !!! | TATTTTCTTATATATAGGAC+CGG | + | chr3_1:84639264-84639283 | None:intergenic | 20.0% |
| !!! | ACATTTTTTTTGAGAGAATT+TGG | + | chr3_1:84639486-84639505 | None:intergenic | 20.0% |
| !!! | ATATAACAATATAGTGGATT+TGG | + | chr3_1:84639514-84639533 | None:intergenic | 20.0% |
| !! | CCATAATGTATTATTAATAC+TGG | + | chr3_1:84639790-84639809 | None:intergenic | 20.0% |
| !! | CCAGTATTAATAATACATTA+TGG | - | chr3_1:84639787-84639806 | Msa0382180:intron | 20.0% |
| !! | TCATATTAACTTAGTTGTTA+AGG | - | chr3_1:84639822-84639841 | Msa0382180:intron | 20.0% |
| !!! | ATTGATAATTACTACGTTAA+TGG | - | chr3_1:84639845-84639864 | Msa0382180:intron | 20.0% |
| !!! | CAACTTTCAATTACATATTT+TGG | - | chr3_1:84639909-84639928 | Msa0382180:intron | 20.0% |
| !! | ATTAATGTTAAAAACCAAAC+AGG | - | chr3_1:84640052-84640071 | Msa0382180:intron | 20.0% |
| ! | GAACAATTTATGATGATTGT+TGG | - | chr3_1:84632540-84632559 | Msa0382180:intron | 25.0% |
| ! | ATTTGATTCAATATTGCCAA+TGG | - | chr3_1:84632609-84632628 | Msa0382180:intron | 25.0% |
| ! | TTTGATTCAATATTGCCAAT+GGG | - | chr3_1:84632610-84632629 | Msa0382180:intron | 25.0% |
| ! | AGTTAATCCTAAACATCTAT+GGG | + | chr3_1:84632699-84632718 | None:intergenic | 25.0% |
| ! | TTTCATATTATCTACGTAAG+CGG | + | chr3_1:84632734-84632753 | None:intergenic | 25.0% |
| ! | AAATTACGACTGCAATATAA+TGG | - | chr3_1:84632767-84632786 | Msa0382180:intron | 25.0% |
| ! | AATTACGACTGCAATATAAT+GGG | - | chr3_1:84632768-84632787 | Msa0382180:intron | 25.0% |
| ! | TGTGTAATTCTAATGTTTAG+AGG | + | chr3_1:84632805-84632824 | None:intergenic | 25.0% |
| !! | ATTATATTGTGGACTAACAT+AGG | + | chr3_1:84632853-84632872 | None:intergenic | 25.0% |
| !!! | TTTTGGCTACACAAAATATT+AGG | + | chr3_1:84633077-84633096 | None:intergenic | 25.0% |
| ! | AAAAAGCTTAGATCAAAAGA+AGG | + | chr3_1:84633304-84633323 | None:intergenic | 25.0% |
| !!! | TCTAAGCTTTTTCTTTCTTT+AGG | - | chr3_1:84633312-84633331 | Msa0382180:intron | 25.0% |
| ! | ATAGTATATGTGTTAGTTCA+AGG | + | chr3_1:84633561-84633580 | None:intergenic | 25.0% |
| !!! | ATCACCTATACTATTTTTTC+AGG | - | chr3_1:84633639-84633658 | Msa0382180:intron | 25.0% |
| !! | ACTATTGATTGATTGATATC+AGG | + | chr3_1:84633726-84633745 | None:intergenic | 25.0% |
| !! | TGCTGATGGAAAATTTTATA+AGG | + | chr3_1:84634150-84634169 | None:intergenic | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+GGG | + | chr3_1:84634245-84634264 | None:intergenic | 25.0% |
| !! | ACATTTTCCTTAAGCATTTT+AGG | + | chr3_1:84634246-84634265 | None:intergenic | 25.0% |
| ! | TATAGGGACTAAAAACAAAA+TGG | - | chr3_1:84634295-84634314 | Msa0382180:intron | 25.0% |
| !!! | TACACTTTTTATTCTTGCAT+TGG | - | chr3_1:84634630-84634649 | Msa0382180:intron | 25.0% |
| ! | ACTTATTTAATATCTAACCC+GGG | - | chr3_1:84634763-84634782 | Msa0382180:intron | 25.0% |
| !!! | TAAACATTGATTTCTCGAAA+GGG | + | chr3_1:84634828-84634847 | None:intergenic | 25.0% |
| !!! | GAGATTTGTTATATATTCCT+TGG | - | chr3_1:84634935-84634954 | Msa0382180:intron | 25.0% |
| ! | AATTTCTTCATCATCTTCAT+CGG | - | chr3_1:84635365-84635384 | Msa0382180:intron | 25.0% |
| ! | ATTTCTCTTATAAATAGGAC+CGG | + | chr3_1:84635626-84635645 | None:intergenic | 25.0% |
| ! | CCCAAATTTCTCTTATAAAT+AGG | - | chr3_1:84635621-84635640 | Msa0382180:intron | 25.0% |
| ! | ATTTCTCTTATAAATAGGAC+CGG | - | chr3_1:84635626-84635645 | Msa0382180:intron | 25.0% |
| !! | TATATCTTTCCATTTTGTCA+AGG | - | chr3_1:84635790-84635809 | Msa0382180:intron | 25.0% |
| !! | ATATCTTTCCATTTTGTCAA+GGG | - | chr3_1:84635791-84635810 | Msa0382180:intron | 25.0% |
| ! | TAAGCACAAATTTAGATAGA+TGG | + | chr3_1:84635925-84635944 | None:intergenic | 25.0% |
| !!! | GGACTTAATTTGTCATAAAA+GGG | + | chr3_1:84636892-84636911 | None:intergenic | 25.0% |
| !!! | TGGACTTAATTTGTCATAAA+AGG | + | chr3_1:84636893-84636912 | None:intergenic | 25.0% |
| ! | AAATTAAGTCCAAGATAAGA+AGG | - | chr3_1:84636901-84636920 | Msa0382180:intron | 25.0% |
| ! | CAAATATAATGAGAAGTTGT+TGG | - | chr3_1:84636941-84636960 | Msa0382180:intron | 25.0% |
| !!! | TTTTTTATGCCAAAAGGATT+TGG | - | chr3_1:84637014-84637033 | Msa0382180:intron | 25.0% |
| ! | TCAATTATGGACATAAGTAA+AGG | - | chr3_1:84637066-84637085 | Msa0382180:intron | 25.0% |
| ! | CAATTATGGACATAAGTAAA+GGG | - | chr3_1:84637067-84637086 | Msa0382180:intron | 25.0% |
| ! | ACCAAGTAATCCTTATAAAA+TGG | - | chr3_1:84637098-84637117 | Msa0382180:intron | 25.0% |
| !! | TCCATTTTATAAGGATTACT+TGG | + | chr3_1:84637102-84637121 | None:intergenic | 25.0% |
| ! | AATCTCAAACTAAACTAAAG+AGG | - | chr3_1:84637535-84637554 | Msa0382180:intron | 25.0% |
| ! | TTTCCAGTAATGATATCTTA+CGG | + | chr3_1:84637601-84637620 | None:intergenic | 25.0% |
| ! | TAAGATATCATTACTGGAAA+TGG | - | chr3_1:84637601-84637620 | Msa0382180:intron | 25.0% |
| !! | TTTAAGATTTGAGAGAGAAA+GGG | - | chr3_1:84638035-84638054 | Msa0382180:intron | 25.0% |
| ! | AAATGATAGAATGATGAATG+AGG | - | chr3_1:84638134-84638153 | Msa0382180:intron | 25.0% |
| ! | TTGAAGAAAAATAGAAGAGT+AGG | - | chr3_1:84638223-84638242 | Msa0382180:intron | 25.0% |
| ! | ATGTTCCTTACTTAATCTAA+TGG | - | chr3_1:84638301-84638320 | Msa0382180:intron | 25.0% |
| ! | TTGAACCATTAGATTAAGTA+AGG | + | chr3_1:84638309-84638328 | None:intergenic | 25.0% |
| !!! | GGTTCAAAAAAACTTTTTCA+TGG | - | chr3_1:84638322-84638341 | Msa0382180:intron | 25.0% |
| !!! | TCAAAAAAACTTTTTCATGG+TGG | - | chr3_1:84638325-84638344 | Msa0382180:intron | 25.0% |
| !!! | CAAAAAAACTTTTTCATGGT+GGG | - | chr3_1:84638326-84638345 | Msa0382180:intron | 25.0% |
| !!! | TGATGATAAGTTTTGGTTTT+TGG | + | chr3_1:84638473-84638492 | None:intergenic | 25.0% |
| !!! | CAATGCAAAATTGCTTTTTT+TGG | + | chr3_1:84638593-84638612 | None:intergenic | 25.0% |
| ! | CATTTGCCAAAAAAAAATAG+TGG | - | chr3_1:84638716-84638735 | Msa0382180:intron | 25.0% |
| ! | TATCAATTCAAACATTCAGA+TGG | + | chr3_1:84638772-84638791 | None:intergenic | 25.0% |
| !! | AGAAAAGTGTATAAATGAAG+GGG | - | chr3_1:84638950-84638969 | Msa0382180:intron | 25.0% |
| ! | AAAGTGGAATATATTGCATT+GGG | - | chr3_1:84638973-84638992 | Msa0382180:intron | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | chr3_1:84639019-84639038 | Msa0382180:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr3_1:84639020-84639039 | Msa0382180:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr3_1:84639041-84639060 | Msa0382180:intron | 25.0% |
| !! | TCTTTTCTTATATATAGGAC+CGG | - | chr3_1:84639372-84639391 | Msa0382180:intron | 25.0% |
| ! | ATAATTACGTGGTAACATAA+TGG | - | chr3_1:84639404-84639423 | Msa0382180:intron | 25.0% |
| ! | GCTGTTATATAACAATATAG+TGG | + | chr3_1:84639520-84639539 | None:intergenic | 25.0% |
| !!! | AGAATGGAATATGCTTTTTA+GGG | + | chr3_1:84639666-84639685 | None:intergenic | 25.0% |
| ! | TTCAACAAACATGTTAGATT+TGG | + | chr3_1:84639690-84639709 | None:intergenic | 25.0% |
| ! | AAAAATTGAAACACTTGAAC+TGG | - | chr3_1:84639977-84639996 | Msa0382180:intron | 25.0% |
| !! | TTTCATGTTATTCCGTTTTA+AGG | + | chr3_1:84640196-84640215 | None:intergenic | 25.0% |
| TTTCAAAGCTTCTTCTTTCA+CGG | + | chr3_1:84632252-84632271 | None:intergenic | 30.0% | |
| AAATCAACCGTAGGTTTATT+AGG | + | chr3_1:84632347-84632366 | None:intergenic | 30.0% | |
| ! | CTGTGAAACATCTTCTTTTT+CGG | - | chr3_1:84632375-84632394 | Msa0382180:intron | 30.0% |
| ! | TGTTTTTCTACAACAACACA+GGG | - | chr3_1:84632462-84632481 | Msa0382180:intron | 30.0% |
| ACATGTGTAAATTGAAGTCA+AGG | + | chr3_1:84632580-84632599 | None:intergenic | 30.0% | |
| ATAAGAAAACGAAATCCCAT+TGG | + | chr3_1:84632628-84632647 | None:intergenic | 30.0% | |
| ! | GATTTTTCCCATAGATGTTT+AGG | - | chr3_1:84632689-84632708 | Msa0382180:intron | 30.0% |
| GAGTTAATCCTAAACATCTA+TGG | + | chr3_1:84632700-84632719 | None:intergenic | 30.0% | |
| TTCATATTATCTACGTAAGC+GGG | + | chr3_1:84632733-84632752 | None:intergenic | 30.0% | |
| CAGTTGCAAACATTATATTG+TGG | + | chr3_1:84632864-84632883 | None:intergenic | 30.0% | |
| TGAAACAGAAACAATAGTAC+AGG | + | chr3_1:84633535-84633554 | None:intergenic | 30.0% | |
| AGTATAGGTGATAGTAGTAT+AGG | + | chr3_1:84633631-84633650 | None:intergenic | 30.0% | |
| AGGACCTGAAAAAATAGTAT+AGG | + | chr3_1:84633646-84633665 | None:intergenic | 30.0% | |
| GAGAGAAAAATCGATTGAAA+AGG | + | chr3_1:84634518-84634537 | None:intergenic | 30.0% | |
| CAATAATGAATTAGTCCATG+TGG | + | chr3_1:84634603-84634622 | None:intergenic | 30.0% | |
| ! | AATTTACTAGTTTAGAGACC+CGG | + | chr3_1:84634794-84634813 | None:intergenic | 30.0% |
| !! | CTAAACATTGATTTCTCGAA+AGG | + | chr3_1:84634829-84634848 | None:intergenic | 30.0% |
| ! | TAAAAGGGATGATTAACTTG+AGG | - | chr3_1:84634856-84634875 | Msa0382180:intron | 30.0% |
| GCTTGAAAAGATTATGTTGT+TGG | - | chr3_1:84634903-84634922 | Msa0382180:intron | 30.0% | |
| !!! | TGGATTTTGTTTTGTATTGG+TGG | - | chr3_1:84634975-84634994 | Msa0382180:intron | 30.0% |
| ! | GAGACTTGTTTAATGTTGTT+AGG | - | chr3_1:84635012-84635031 | Msa0382180:intron | 30.0% |
| !!! | ATGCTCTTAGTTTGTTCTTT+TGG | - | chr3_1:84635053-84635072 | Msa0382180:intron | 30.0% |
| !!! | TGCTCTTAGTTTGTTCTTTT+GGG | - | chr3_1:84635054-84635073 | Msa0382180:intron | 30.0% |
| ! | GTTTGAAGTACTATGTCTAA+TGG | + | chr3_1:84635248-84635267 | None:intergenic | 30.0% |
| !! | GATAAAAGAGGGTATTCAAA+AGG | - | chr3_1:84635411-84635430 | Msa0382180:CDS | 30.0% |
| TTTCTCTTATAAATAGGACC+GGG | + | chr3_1:84635627-84635646 | None:intergenic | 30.0% | |
| ! | AATTTTCACCCTTGACAAAA+TGG | + | chr3_1:84635802-84635821 | None:intergenic | 30.0% |
| ! | CTAACAACTTTTGATGTCTT+TGG | - | chr3_1:84635881-84635900 | Msa0382180:intron | 30.0% |
| CACAAATTTAGATAGATGGA+AGG | + | chr3_1:84635921-84635940 | None:intergenic | 30.0% | |
| TAACTGTGTCTTTGAATTGT+TGG | + | chr3_1:84635964-84635983 | None:intergenic | 30.0% | |
| ATCTTAGACCAAAACTTCAT+GGG | + | chr3_1:84636012-84636031 | None:intergenic | 30.0% | |
| ! | TGGTAGTTGATTCAATCTAA+AGG | + | chr3_1:84636053-84636072 | None:intergenic | 30.0% |
| TAGACCATAATAAGATTTGG+TGG | - | chr3_1:84636808-84636827 | Msa0382180:intron | 30.0% | |
| ! | AGACCATAATAAGATTTGGT+GGG | - | chr3_1:84636809-84636828 | Msa0382180:intron | 30.0% |
| TAACCCACCAAATCTTATTA+TGG | + | chr3_1:84636815-84636834 | None:intergenic | 30.0% | |
| ! | TCATGGGTTAAAAAGTTCAT+AGG | + | chr3_1:84636973-84636992 | None:intergenic | 30.0% |
| !!! | GAAGGCATTTTTAACATCTA+TGG | - | chr3_1:84637036-84637055 | Msa0382180:intron | 30.0% |
| CTATGGAGACATTTCAATTA+TGG | - | chr3_1:84637053-84637072 | Msa0382180:intron | 30.0% | |
| ! | GGACTTGGAATTTTCTAATT+GGG | + | chr3_1:84637493-84637512 | None:intergenic | 30.0% |
| ! | TGGACTTGGAATTTTCTAAT+TGG | + | chr3_1:84637494-84637513 | None:intergenic | 30.0% |
| !!! | GTAATTGTTGTTTTTGGACT+TGG | + | chr3_1:84637508-84637527 | None:intergenic | 30.0% |
| TAAAAGCAAAAATCAAAGGC+TGG | - | chr3_1:84637575-84637594 | Msa0382180:intron | 30.0% | |
| TAAGTATGTTTACATGATGC+CGG | + | chr3_1:84637669-84637688 | None:intergenic | 30.0% | |
| ATCAAATTCGATGTCAAATC+CGG | + | chr3_1:84637940-84637959 | None:intergenic | 30.0% | |
| ! | GTTTAAGATTTGAGAGAGAA+AGG | - | chr3_1:84638034-84638053 | Msa0382180:intron | 30.0% |
| TTAAGATTTGAGAGAGAAAG+GGG | - | chr3_1:84638036-84638055 | Msa0382180:intron | 30.0% | |
| AAAATAGAAGAGTAGGATGA+TGG | - | chr3_1:84638230-84638249 | Msa0382180:intron | 30.0% | |
| TTAACTGCACTTTGTGTATT+GGG | + | chr3_1:84638501-84638520 | None:intergenic | 30.0% | |
| ATTAACTGCACTTTGTGTAT+TGG | + | chr3_1:84638502-84638521 | None:intergenic | 30.0% | |
| !! | CTTTTTAGAAGTTGACTACA+CGG | - | chr3_1:84638631-84638650 | Msa0382180:intron | 30.0% |
| !!! | CTTGCTCCACTATTTTTTTT+TGG | + | chr3_1:84638725-84638744 | None:intergenic | 30.0% |
| TCTGTATGAAAAACCAAAGT+AGG | + | chr3_1:84638927-84638946 | None:intergenic | 30.0% | |
| GAAAGTGGAATATATTGCAT+TGG | - | chr3_1:84638972-84638991 | Msa0382180:intron | 30.0% | |
| AGAAAATGGGTCAATTATTC+CGG | - | chr3_1:84639055-84639074 | Msa0382180:intron | 30.0% | |
| CAACTATTCAGCTAAAACAA+GGG | + | chr3_1:84639552-84639571 | None:intergenic | 30.0% | |
| !! | GAATGGAATATGCTTTTTAG+GGG | + | chr3_1:84639665-84639684 | None:intergenic | 30.0% |
| !! | CAGAATGGAATATGCTTTTT+AGG | + | chr3_1:84639667-84639686 | None:intergenic | 30.0% |
| TAAAAAAAACGCAACAGCTA+CGG | - | chr3_1:84640134-84640153 | Msa0382180:intron | 30.0% | |
| ! | TGTTGGTTGAAAACATCAAA+CGG | + | chr3_1:84640413-84640432 | None:intergenic | 30.0% |
| ATAAGAGATACCTTCTAATG+AGG | - | chr3_1:84640568-84640587 | Msa0382180:intron | 30.0% | |
| ATCATCAACAAAGCCAATTA+AGG | - | chr3_1:84640880-84640899 | Msa0382180:CDS | 30.0% | |
| CTTTACATATAGTTTCTGCT+TGG | + | chr3_1:84640921-84640940 | None:intergenic | 30.0% | |
| !! | GTGTTGATTAAGAGCTTCAT+CGG | + | chr3_1:84632294-84632313 | None:intergenic | 35.0% |
| AAGTCCTCCTAATAAACCTA+CGG | - | chr3_1:84632337-84632356 | Msa0382180:intron | 35.0% | |
| !!! | ACATCTTCTTTTTCGGTCTT+TGG | - | chr3_1:84632382-84632401 | Msa0382180:intron | 35.0% |
| ! | AAACTCAAAGGTTGTTTCCT+CGG | + | chr3_1:84632413-84632432 | None:intergenic | 35.0% |
| !! | ACAACCTTTGAGTTTTCGAA+CGG | - | chr3_1:84632418-84632437 | Msa0382180:intron | 35.0% |
| !! | CTGTTTTTCTACAACAACAC+AGG | - | chr3_1:84632461-84632480 | Msa0382180:intron | 35.0% |
| TACAACAACACAGGGTTATA+AGG | - | chr3_1:84632470-84632489 | Msa0382180:intron | 35.0% | |
| GTGTAAATTGAAGTCAAGGA+AGG | + | chr3_1:84632576-84632595 | None:intergenic | 35.0% | |
| !!! | CTGCAATATAATGGGTTTTG+AGG | - | chr3_1:84632776-84632795 | Msa0382180:intron | 35.0% |
| AAACTCGTAGGTGTTTGTAA+TGG | + | chr3_1:84633494-84633513 | None:intergenic | 35.0% | |
| ATAGTACAGGTGTTAGTTCA+AGG | + | chr3_1:84633522-84633541 | None:intergenic | 35.0% | |
| ATAGGGACTAAAAATGCTGA+TGG | + | chr3_1:84634164-84634183 | None:intergenic | 35.0% | |
| TTAGGGACCAAAAATGTTGA+TGG | + | chr3_1:84634228-84634247 | None:intergenic | 35.0% | |
| TTTGGTCCCTAAAATGCTTA+AGG | - | chr3_1:84634236-84634255 | Msa0382180:intron | 35.0% | |
| ATGCTTAAGGAAAATGTCAC+AGG | - | chr3_1:84634249-84634268 | Msa0382180:intron | 35.0% | |
| ! | ATTTTTCTCTCTCATACGCA+TGG | - | chr3_1:84634527-84634546 | Msa0382180:intron | 35.0% |
| ! | TTTTTCTCTCTCATACGCAT+GGG | - | chr3_1:84634528-84634547 | Msa0382180:intron | 35.0% |
| ACTCATGACCACATGTTTAA+AGG | - | chr3_1:84634562-84634581 | Msa0382180:intron | 35.0% | |
| CTCATGACCACATGTTTAAA+GGG | - | chr3_1:84634563-84634582 | Msa0382180:intron | 35.0% | |
| !!! | GCTCTTAGTTTGTTCTTTTG+GGG | - | chr3_1:84635055-84635074 | Msa0382180:intron | 35.0% |
| !! | TACTATTACTCTTTGGAACG+AGG | - | chr3_1:84635276-84635295 | Msa0382180:intron | 35.0% |
| GTTATCCTTGGAAAGAGATA+TGG | - | chr3_1:84635487-84635506 | Msa0382180:CDS | 35.0% | |
| ATAAGCCATATCTCTTTCCA+AGG | + | chr3_1:84635495-84635514 | None:intergenic | 35.0% | |
| TTCTCTTATAAATAGGACCG+GGG | + | chr3_1:84635628-84635647 | None:intergenic | 35.0% | |
| AAAAGTTGTTAGTCGTTGAG+AGG | + | chr3_1:84635873-84635892 | None:intergenic | 35.0% | |
| AATTTGTGCTTAAGCGCTTT+AGG | - | chr3_1:84635933-84635952 | Msa0382180:intron | 35.0% | |
| TCAAAGACACAGTTACTTCA+TGG | - | chr3_1:84635969-84635988 | Msa0382180:intron | 35.0% | |
| CAAAGACACAGTTACTTCAT+GGG | - | chr3_1:84635970-84635989 | Msa0382180:intron | 35.0% | |
| CATCTTAGACCAAAACTTCA+TGG | + | chr3_1:84636013-84636032 | None:intergenic | 35.0% | |
| !! | CATGAAGTTTTGGTCTAAGA+TGG | - | chr3_1:84636011-84636030 | Msa0382180:intron | 35.0% |
| GGATGGACAATGATAAGAAT+TGG | + | chr3_1:84636073-84636092 | None:intergenic | 35.0% | |
| !! | TGTAGTTGATGGGTTGTATT+TGG | + | chr3_1:84636099-84636118 | None:intergenic | 35.0% |
| TAGAGTAGATGAGTGAGATT+TGG | - | chr3_1:84636779-84636798 | Msa0382180:intron | 35.0% | |
| TTATGCCAAAAGGATTTGGA+AGG | - | chr3_1:84637018-84637037 | Msa0382180:intron | 35.0% | |
| ! | AAATGCCTTCCAAATCCTTT+TGG | + | chr3_1:84637026-84637045 | None:intergenic | 35.0% |
| CAAAAAAACTTTCCCATGGT+GGG | + | chr3_1:84637244-84637263 | None:intergenic | 35.0% | |
| TCAAAAAAACTTTCCCATGG+TGG | + | chr3_1:84637245-84637264 | None:intergenic | 35.0% | |
| GGTTCAAAAAAACTTTCCCA+TGG | + | chr3_1:84637248-84637267 | None:intergenic | 35.0% | |
| GTTTATTGAACAAGGTTGTG+AGG | + | chr3_1:84637385-84637404 | None:intergenic | 35.0% | |
| CTTGAGGAGTTTATTGAACA+AGG | + | chr3_1:84637393-84637412 | None:intergenic | 35.0% | |
| CTTGTTCAATAAACTCCTCA+AGG | - | chr3_1:84637391-84637410 | Msa0382180:intron | 35.0% | |
| TAAGATTTGAGAGAGAAAGG+GGG | - | chr3_1:84638037-84638056 | Msa0382180:intron | 35.0% | |
| TTATACATAACTGTGCCCTT+TGG | - | chr3_1:84638425-84638444 | Msa0382180:intron | 35.0% | |
| TATACATAACTGTGCCCTTT+GGG | - | chr3_1:84638426-84638445 | Msa0382180:intron | 35.0% | |
| !! | TGTATATTGGCTTACCCAAA+GGG | + | chr3_1:84638443-84638462 | None:intergenic | 35.0% |
| !! | ATGTATATTGGCTTACCCAA+AGG | + | chr3_1:84638444-84638463 | None:intergenic | 35.0% |
| TTTGGGTAAGCCAATATACA+TGG | - | chr3_1:84638443-84638462 | Msa0382180:intron | 35.0% | |
| !! | TTTTGGTGTGCCATGTATAT+TGG | + | chr3_1:84638456-84638475 | None:intergenic | 35.0% |
| ! | GGAGTAGTGATGATAAGTTT+TGG | + | chr3_1:84638480-84638499 | None:intergenic | 35.0% |
| CTCCAATCTCGAGAAAAAAA+GGG | - | chr3_1:84638528-84638547 | Msa0382180:intron | 35.0% | |
| !! | ATGTTAATTTGTGCCCTCAA+GGG | + | chr3_1:84638699-84638718 | None:intergenic | 35.0% |
| !! | AATGTTAATTTGTGCCCTCA+AGG | + | chr3_1:84638700-84638719 | None:intergenic | 35.0% |
| !!! | AAAGGTTTTGGGAAACCAAA+CGG | - | chr3_1:84638794-84638813 | Msa0382180:intron | 35.0% |
| CAAAGTAGGTCAATTATACC+GGG | + | chr3_1:84638913-84638932 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | + | chr3_1:84638914-84638933 | None:intergenic | 35.0% | |
| TGTATAAATGAAGGGGAAAG+TGG | - | chr3_1:84638957-84638976 | Msa0382180:intron | 35.0% | |
| GAAAATGGGTCAATTATTCC+GGG | - | chr3_1:84639056-84639075 | Msa0382180:intron | 35.0% | |
| TCAACTGGCAGCTAATTATT+AGG | + | chr3_1:84639094-84639113 | None:intergenic | 35.0% | |
| ! | TTTTTAACATGTACTCCCTC+CGG | - | chr3_1:84639242-84639261 | Msa0382180:intron | 35.0% |
| TTCTTATATATAGGACCGGA+GGG | + | chr3_1:84639376-84639395 | None:intergenic | 35.0% | |
| TTTCTTATATATAGGACCGG+AGG | + | chr3_1:84639375-84639394 | None:intergenic | 35.0% | |
| TTTCTTATATATAGGACCGG+AGG | - | chr3_1:84639375-84639394 | Msa0382180:intron | 35.0% | |
| TTCTTATATATAGGACCGGA+GGG | - | chr3_1:84639376-84639395 | Msa0382180:intron | 35.0% | |
| ACGTAATTATTTACTCCCTC+CGG | + | chr3_1:84639394-84639413 | None:intergenic | 35.0% | |
| GCAACTATTCAGCTAAAACA+AGG | + | chr3_1:84639553-84639572 | None:intergenic | 35.0% | |
| ACATGTTAGATTTGGCAGAA+TGG | + | chr3_1:84639682-84639701 | None:intergenic | 35.0% | |
| TGCAACTATACTTCAAGCTA+AGG | - | chr3_1:84639742-84639761 | Msa0382180:intron | 35.0% | |
| ! | ATGTAATGAAGCATCCTGTT+TGG | + | chr3_1:84640069-84640088 | None:intergenic | 35.0% |
| AAAAAAAACGCAACAGCTAC+GGG | - | chr3_1:84640135-84640154 | Msa0382180:intron | 35.0% | |
| TTCGACAGAGATCCTTAAAA+CGG | - | chr3_1:84640181-84640200 | Msa0382180:intron | 35.0% | |
| TCAATCACAAATCTCATGCT+TGG | + | chr3_1:84640224-84640243 | None:intergenic | 35.0% | |
| ! | TGGGTTACTTTGGTATTTGT+TGG | + | chr3_1:84640326-84640345 | None:intergenic | 35.0% |
| !!! | GATTTTTATGGTATCGGCTT+GGG | + | chr3_1:84640353-84640372 | None:intergenic | 35.0% |
| !!! | TGATTTTTATGGTATCGGCT+TGG | + | chr3_1:84640354-84640373 | None:intergenic | 35.0% |
| AGCCGATACCATAAAAATCA+CGG | - | chr3_1:84640354-84640373 | Msa0382180:intron | 35.0% | |
| ! | CTCCGTGATTTTTATGGTAT+CGG | + | chr3_1:84640359-84640378 | None:intergenic | 35.0% |
| ACTTCTAACTGATTGTCCTT+AGG | - | chr3_1:84640432-84640451 | Msa0382180:intron | 35.0% | |
| TCGTGAAACTAATTGACCTA+AGG | + | chr3_1:84640451-84640470 | None:intergenic | 35.0% | |
| CGAAACGATTGATCTTTGTT+AGG | - | chr3_1:84640468-84640487 | Msa0382180:intron | 35.0% | |
| AGGAAACATGATATCCATGA+AGG | - | chr3_1:84640488-84640507 | Msa0382180:intron | 35.0% | |
| ! | AGTTTTCTCTCATTCCTTCA+TGG | + | chr3_1:84640505-84640524 | None:intergenic | 35.0% |
| TTGTATTTCTCATCCCAAGT+TGG | + | chr3_1:84640693-84640712 | None:intergenic | 35.0% | |
| GAAATTACAAGAAGAGATGC+CGG | - | chr3_1:84640730-84640749 | Msa0382180:intron | 35.0% | |
| TCTCTTGTTGGATAAGCATT+TGG | + | chr3_1:84640786-84640805 | None:intergenic | 35.0% | |
| TACATATAGTTTCTGCTTGG+TGG | + | chr3_1:84640918-84640937 | None:intergenic | 35.0% | |
| CGAACATGGTCAATATACGA+CGG | + | chr3_1:84632185-84632204 | None:intergenic | 40.0% | |
| CATGTTCGTGAGAAATACCT+GGG | - | chr3_1:84632197-84632216 | Msa0382180:CDS | 40.0% | |
| TCAACCGTAGGTTTATTAGG+AGG | + | chr3_1:84632344-84632363 | None:intergenic | 40.0% | |
| GCAAGAATCAAATCAACCGT+AGG | + | chr3_1:84632356-84632375 | None:intergenic | 40.0% | |
| CAATCGGTAAATTCACTCGT+AGG | + | chr3_1:84633419-84633438 | None:intergenic | 40.0% | |
| ATGCCAGCAACAATAGTTCA+AGG | + | chr3_1:84633471-84633490 | None:intergenic | 40.0% | |
| TACAAACACCTACGAGTTTC+AGG | - | chr3_1:84633495-84633514 | Msa0382180:intron | 40.0% | |
| ACGCTACTGTTGAAACGAAA+AGG | + | chr3_1:84633591-84633610 | None:intergenic | 40.0% | |
| TTTGGGTCCCTTTAAACATG+TGG | + | chr3_1:84634573-84634592 | None:intergenic | 40.0% | |
| ! | GTCCATGTGGTAAGAGTTTT+GGG | + | chr3_1:84634590-84634609 | None:intergenic | 40.0% |
| ! | AGTCCATGTGGTAAGAGTTT+TGG | + | chr3_1:84634591-84634610 | None:intergenic | 40.0% |
| ! | AAGGGATGATTAACTTGAGG+TGG | - | chr3_1:84634859-84634878 | Msa0382180:intron | 40.0% |
| AGAAGACGGATAGTTATCCT+TGG | - | chr3_1:84635475-84635494 | Msa0382180:CDS | 40.0% | |
| ATATCAAATGTTACTCCCCC+CGG | - | chr3_1:84635515-84635534 | Msa0382180:CDS | 40.0% | |
| TCTCTTATAAATAGGACCGG+GGG | + | chr3_1:84635629-84635648 | None:intergenic | 40.0% | |
| TCTCTTATAAATAGGACCGG+AGG | - | chr3_1:84635629-84635648 | Msa0382180:intron | 40.0% | |
| CTCTTATAAATAGGACCGGA+GGG | - | chr3_1:84635630-84635649 | Msa0382180:intron | 40.0% | |
| ! | TGCTAAAGTATTACTCCCTC+CGG | + | chr3_1:84635648-84635667 | None:intergenic | 40.0% |
| !! | TTCATGGGTGTCATTTAGCT+TGG | - | chr3_1:84635985-84636004 | Msa0382180:intron | 40.0% |
| !! | TTGATGGGTTGTATTTGGTG+TGG | + | chr3_1:84636094-84636113 | None:intergenic | 40.0% |
| CATGCACAACCTTCTTATCT+TGG | + | chr3_1:84636913-84636932 | None:intergenic | 40.0% | |
| ACCTACATCATTGAGTGTGA+CGG | + | chr3_1:84637144-84637163 | None:intergenic | 40.0% | |
| AGATACGGTGGCATTTACTA+TGG | - | chr3_1:84637202-84637221 | Msa0382180:intron | 40.0% | |
| GATACGGTGGCATTTACTAT+GGG | - | chr3_1:84637203-84637222 | Msa0382180:intron | 40.0% | |
| !! | GTGAAGTTGATGTTGTTGGT+GGG | + | chr3_1:84637335-84637354 | None:intergenic | 40.0% |
| !! | AGTGAAGTTGATGTTGTTGG+TGG | + | chr3_1:84637336-84637355 | None:intergenic | 40.0% |
| !! | GGTAGTGAAGTTGATGTTGT+TGG | + | chr3_1:84637339-84637358 | None:intergenic | 40.0% |
| !! | TCAACTTTAGAGCTACCTTG+AGG | + | chr3_1:84637409-84637428 | None:intergenic | 40.0% |
| TGGCCGTAAGATATCATTAC+TGG | - | chr3_1:84637595-84637614 | Msa0382180:intron | 40.0% | |
| TCATTACTGGAAATGGAGAC+AGG | - | chr3_1:84637608-84637627 | Msa0382180:intron | 40.0% | |
| !! | TTATGAGTGCTGAGATTCAG+AGG | + | chr3_1:84637861-84637880 | None:intergenic | 40.0% |
| TGTCAAATCCGGTTTATGCA+GGG | + | chr3_1:84637929-84637948 | None:intergenic | 40.0% | |
| ATGTCAAATCCGGTTTATGC+AGG | + | chr3_1:84637930-84637949 | None:intergenic | 40.0% | |
| TGCAACTAACTCAATCTCAC+CGG | + | chr3_1:84638198-84638217 | None:intergenic | 40.0% | |
| GAGATTGAGTTAGTTGCACA+TGG | - | chr3_1:84638200-84638219 | Msa0382180:intron | 40.0% | |
| ! | ATAGAAGAGTAGGATGATGG+TGG | - | chr3_1:84638233-84638252 | Msa0382180:intron | 40.0% |
| GAAAAGATTCACCTTTCCCA+TGG | - | chr3_1:84638348-84638367 | Msa0382180:intron | 40.0% | |
| !! | AAATGCCACATGGAGGTATT+AGG | - | chr3_1:84638372-84638391 | Msa0382180:intron | 40.0% |
| ATTGACCTAATACCTCCATG+TGG | + | chr3_1:84638380-84638399 | None:intergenic | 40.0% | |
| GCTCCAATCTCGAGAAAAAA+AGG | - | chr3_1:84638527-84638546 | Msa0382180:intron | 40.0% | |
| !!! | GACCCTTTTTTTCTCGAGAT+TGG | + | chr3_1:84638533-84638552 | None:intergenic | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+CGG | - | chr3_1:84638552-84638571 | Msa0382180:intron | 40.0% |
| ! | TTCCTTAACATGTGCCGTTA+GGG | + | chr3_1:84638569-84638588 | None:intergenic | 40.0% |
| ! | ATTCCTTAACATGTGCCGTT+AGG | + | chr3_1:84638570-84638589 | None:intergenic | 40.0% |
| TACGTTGTTAAGAAGCCGTT+TGG | + | chr3_1:84638812-84638831 | None:intergenic | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | - | chr3_1:84638911-84638930 | Msa0382180:intron | 40.0% | |
| !! | TAGTAGGGGAAGTATTCAAC+TGG | + | chr3_1:84639109-84639128 | None:intergenic | 40.0% |
| GGAGGGAGTAAATAATTACG+TGG | - | chr3_1:84639393-84639412 | Msa0382180:intron | 40.0% | |
| !! | GAATATGCTTTTTAGGGGCA+CGG | + | chr3_1:84639660-84639679 | None:intergenic | 40.0% |
| CTAAGGTCCATAGATGATTC+AGG | - | chr3_1:84639759-84639778 | Msa0382180:intron | 40.0% | |
| GGTACAACCTGAATCATCTA+TGG | + | chr3_1:84639769-84639788 | None:intergenic | 40.0% | |
| CAGTGTAATCTCACAGACAA+TGG | + | chr3_1:84640028-84640047 | None:intergenic | 40.0% | |
| CATTGTCTGTGAGATTACAC+TGG | - | chr3_1:84640026-84640045 | Msa0382180:intron | 40.0% | |
| AAAAAAACGCAACAGCTACG+GGG | - | chr3_1:84640136-84640155 | Msa0382180:intron | 40.0% | |
| !! | ACTTTGGTATTTGTTGGCTC+TGG | + | chr3_1:84640320-84640339 | None:intergenic | 40.0% |
| ! | AAGGCTCTCCGTGATTTTTA+TGG | + | chr3_1:84640365-84640384 | None:intergenic | 40.0% |
| ! | TTTTCTCACCAAAGGATGGA+AGG | + | chr3_1:84640384-84640403 | None:intergenic | 40.0% |
| !!! | CCTTTTTTCTCACCAAAGGA+TGG | + | chr3_1:84640388-84640407 | None:intergenic | 40.0% |
| CCATCCTTTGGTGAGAAAAA+AGG | - | chr3_1:84640385-84640404 | Msa0382180:intron | 40.0% | |
| !!! | GGTTCCTTTTTTCTCACCAA+AGG | + | chr3_1:84640392-84640411 | None:intergenic | 40.0% |
| ! | GGACAATCAGTTAGAAGTGT+TGG | + | chr3_1:84640430-84640449 | None:intergenic | 40.0% |
| AGAGATACCTTCTAATGAGG+TGG | - | chr3_1:84640571-84640590 | Msa0382180:intron | 40.0% | |
| CTTGTAACCACCTCATTAGA+AGG | + | chr3_1:84640581-84640600 | None:intergenic | 40.0% | |
| CGGGGGACTATTAGAAATAT+AGG | + | chr3_1:84640644-84640663 | None:intergenic | 40.0% | |
| ! | TTGGTTGTTGACTATGCTCT+TGG | + | chr3_1:84640767-84640786 | None:intergenic | 40.0% |
| ! | GAGTTGTGGTTTTCTCTTGT+TGG | + | chr3_1:84640798-84640817 | None:intergenic | 40.0% |
| CAAGAGAAAACCACAACTCA+AGG | - | chr3_1:84640799-84640818 | Msa0382180:CDS | 40.0% | |
| ! | TTGTTGCTTCTTCCTTCAAG+CGG | + | chr3_1:84640830-84640849 | None:intergenic | 40.0% |
| AATCAACGCTTAACCACCAT+TGG | - | chr3_1:84640849-84640868 | Msa0382180:CDS | 40.0% | |
| ! | TTGATGATTGCTTCTGCCAA+TGG | + | chr3_1:84640868-84640887 | None:intergenic | 40.0% |
| ! | GTTAAGCGTTGTGCCTTAAT+TGG | + | chr3_1:84640896-84640915 | None:intergenic | 40.0% |
| ! | TTGTTGTTGTGCTTCTGTCA+TGG | + | chr3_1:84640982-84641001 | None:intergenic | 40.0% |
| ! | ATGACAGAAGCACAACAACA+AGG | - | chr3_1:84640981-84641000 | Msa0382180:CDS | 40.0% |
| ACAACAAGGCTTAACCATCA+TGG | - | chr3_1:84640995-84641014 | Msa0382180:CDS | 40.0% | |
| CCAGGTATTTCTCACGAACA+TGG | + | chr3_1:84632199-84632218 | None:intergenic | 45.0% | |
| CCATGTTCGTGAGAAATACC+TGG | - | chr3_1:84632196-84632215 | Msa0382180:CDS | 45.0% | |
| CCAACCGTTCGAAAACTCAA+AGG | + | chr3_1:84632425-84632444 | None:intergenic | 45.0% | |
| !! | CCTTTGAGTTTTCGAACGGT+TGG | - | chr3_1:84632422-84632441 | Msa0382180:intron | 45.0% |
| GGTCCTTGAACTATTGTTGC+TGG | - | chr3_1:84633465-84633484 | Msa0382180:intron | 45.0% | |
| TTCAAGGACCTGAAACTCGT+AGG | + | chr3_1:84633506-84633525 | None:intergenic | 45.0% | |
| ATGAATGTGGAAGTGACACG+TGG | + | chr3_1:84633774-84633793 | None:intergenic | 45.0% | |
| GACCCAAAACTCTTACCACA+TGG | - | chr3_1:84634585-84634604 | Msa0382180:intron | 45.0% | |
| !! | CTTTTGGGGATTGATGCTCT+TGG | - | chr3_1:84635069-84635088 | Msa0382180:intron | 45.0% |
| CTCTTATAAATAGGACCGGG+GGG | + | chr3_1:84635533-84635552 | None:intergenic | 45.0% | |
| ! | AGCTTGGACCCATGAAGTTT+TGG | - | chr3_1:84636001-84636020 | Msa0382180:intron | 45.0% |
| !! | TGGGTTGTATTTGGTGTGGA+TGG | + | chr3_1:84636090-84636109 | None:intergenic | 45.0% |
| AATGATGTAGGTCCTGCACA+TGG | - | chr3_1:84637152-84637171 | Msa0382180:intron | 45.0% | |
| !!! | CAAGGCTGATTGTTTTGGGA+TGG | + | chr3_1:84637181-84637200 | None:intergenic | 45.0% |
| GGTGGCATTTACTATGGGAA+AGG | - | chr3_1:84637208-84637227 | Msa0382180:intron | 45.0% | |
| ! | AAACTTTCCCATGGTGGGAA+AGG | + | chr3_1:84637239-84637258 | None:intergenic | 45.0% |
| CAAGGTTGTGAGGTTTGAGA+GGG | + | chr3_1:84637375-84637394 | None:intergenic | 45.0% | |
| ACAAGGTTGTGAGGTTTGAG+AGG | + | chr3_1:84637376-84637395 | None:intergenic | 45.0% | |
| GTTGTCTGATACAACGTCCT+TGG | - | chr3_1:84637641-84637660 | Msa0382180:intron | 45.0% | |
| ! | CGGCTGGAAAAGCAATTTTC+CGG | + | chr3_1:84637707-84637726 | None:intergenic | 45.0% |
| !! | CGGAAAATTGCTTTTCCAGC+CGG | - | chr3_1:84637705-84637724 | Msa0382180:intron | 45.0% |
| CTCATAATCCTGCAGGTTAC+CGG | + | chr3_1:84637727-84637746 | None:intergenic | 45.0% | |
| ACAACTGCTCATAATCCTGC+AGG | + | chr3_1:84637734-84637753 | None:intergenic | 45.0% | |
| GCAGGATTATGAGCAGTTGT+CGG | - | chr3_1:84637734-84637753 | Msa0382180:intron | 45.0% | |
| ACCTGCAATTCTAGTGGAGA+TGG | + | chr3_1:84637793-84637812 | None:intergenic | 45.0% | |
| CCACTAGAATTGCAGGTTAG+CGG | - | chr3_1:84637796-84637815 | Msa0382180:intron | 45.0% | |
| ! | TTTGGTTTCCGACGAGATTC+CGG | - | chr3_1:84638176-84638195 | Msa0382180:intron | 45.0% |
| !! | AGTAGGATGATGGTGGAAGA+TGG | - | chr3_1:84638240-84638259 | Msa0382180:intron | 45.0% |
| TGTGGCATTTACCATGGGAA+AGG | + | chr3_1:84638362-84638381 | None:intergenic | 45.0% | |
| TTCCCATGGTAAATGCCACA+TGG | - | chr3_1:84638362-84638381 | Msa0382180:intron | 45.0% | |
| CTCCATGTGGCATTTACCAT+GGG | + | chr3_1:84638367-84638386 | None:intergenic | 45.0% | |
| TTCCTTAACATGTGCCCTTG+AGG | - | chr3_1:84638682-84638701 | Msa0382180:intron | 45.0% | |
| TCCTTAACATGTGCCCTTGA+GGG | - | chr3_1:84638683-84638702 | Msa0382180:intron | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | + | chr3_1:84638909-84638928 | None:intergenic | 45.0% | |
| ATGGGTCAATTATTCCGGGA+CGG | - | chr3_1:84639060-84639079 | Msa0382180:intron | 45.0% | |
| GACAGTTTGTCTAACGTGGT+TGG | + | chr3_1:84640259-84640278 | None:intergenic | 45.0% | |
| CTTCGACAGTTTGTCTAACG+TGG | + | chr3_1:84640263-84640282 | None:intergenic | 45.0% | |
| ACAAACTGTCGAAGACTGTG+AGG | - | chr3_1:84640269-84640288 | Msa0382180:intron | 45.0% | |
| GACAGTTTGCCATGACTGTT+AGG | + | chr3_1:84640298-84640317 | None:intergenic | 45.0% | |
| TGGTCACAACACTTCCAACT+TGG | - | chr3_1:84640676-84640695 | Msa0382180:intron | 45.0% | |
| GGTCACAACACTTCCAACTT+GGG | - | chr3_1:84640677-84640696 | Msa0382180:intron | 45.0% | |
| AAGAGATGCCGGAAACACAT+CGG | - | chr3_1:84640741-84640760 | Msa0382180:intron | 45.0% | |
| ! | AGCGGTTAAACCTTGAGTTG+TGG | + | chr3_1:84640812-84640831 | None:intergenic | 45.0% |
| CTCAAGGTTTAACCGCTTGA+AGG | - | chr3_1:84640815-84640834 | Msa0382180:CDS | 45.0% | |
| ATGATTGCTTCTGCCAATGG+TGG | + | chr3_1:84640865-84640884 | None:intergenic | 45.0% | |
| GTTGTTGTGCTTCTGCTAAG+TGG | + | chr3_1:84640949-84640968 | None:intergenic | 45.0% | |
| TGTTGTGCTTCTGTCATGGA+TGG | + | chr3_1:84640978-84640997 | None:intergenic | 45.0% | |
| TCTTGTGCTTCTGTCCATGA+TGG | + | chr3_1:84641012-84641031 | None:intergenic | 45.0% | |
| ! | TGGACAGAAGCACAAGAAGA+AGG | - | chr3_1:84641015-84641034 | Msa0382180:CDS | 45.0% |
| AAACGACGCTTAACCATCCT+TGG | - | chr3_1:84641043-84641062 | Msa0382180:CDS | 45.0% | |
| !! | AAATTAAATAAAATATTTAG+TGG | + | chr3_1:84633043-84633062 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTAACTATAATAA+AGG | - | chr3_1:84633226-84633245 | Msa0382180:intron | 5.0% |
| !!! | TTAAAAATCAATATTTTATT+TGG | - | chr3_1:84633823-84633842 | Msa0382180:intron | 5.0% |
| !! | TATTTATGTTAAATAAAATA+GGG | + | chr3_1:84633834-84633853 | None:intergenic | 5.0% |
| !! | ATATTTATGTTAAATAAAAT+AGG | + | chr3_1:84633835-84633854 | None:intergenic | 5.0% |
| !!! | TATTATATATATTTTTTCAA+AGG | - | chr3_1:84635172-84635191 | Msa0382180:intron | 5.0% |
| !!! | ATTTTTATTTTTAATCTTAT+GGG | + | chr3_1:84636490-84636509 | None:intergenic | 5.0% |
| !!! | TATTTTTATTTTTAATCTTA+TGG | + | chr3_1:84636491-84636510 | None:intergenic | 5.0% |
| !!! | AAATATATTTTCTTATATAT+AGG | + | chr3_1:84639269-84639288 | None:intergenic | 5.0% |
| !!! | ATAAGAAAATATATTTTTTT+AGG | - | chr3_1:84639273-84639292 | Msa0382180:intron | 5.0% |
| ! | GTGCTACTGTTGCGGCTTAA+CGG | - | chr3_1:84632148-84632167 | Msa0382180:CDS | 50.0% |
| GTGAGAAATACCTGGGTCGT+TGG | - | chr3_1:84632204-84632223 | Msa0382180:CDS | 50.0% | |
| TACCTGGGTCGTTGGATTTG+TGG | - | chr3_1:84632212-84632231 | Msa0382180:CDS | 50.0% | |
| ACCTGGGTCGTTGGATTTGT+GGG | - | chr3_1:84632213-84632232 | Msa0382180:CDS | 50.0% | |
| ! | GATTTGTGGGCTATGTGCAG+AGG | - | chr3_1:84632226-84632245 | Msa0382180:CDS | 50.0% |
| TTCGGTCTTTGGATTCTCCG+AGG | - | chr3_1:84632393-84632412 | Msa0382180:intron | 50.0% | |
| ATAAACGTGGAAGCGACACG+TGG | + | chr3_1:84632939-84632958 | None:intergenic | 50.0% | |
| !! | ATTTTGACCTGTGCGACGCA+CGG | - | chr3_1:84635121-84635140 | Msa0382180:intron | 50.0% |
| CATTGAGTGTGACGGCAAAG+AGG | + | chr3_1:84637136-84637155 | None:intergenic | 50.0% | |
| GCCGTCACACTCAATGATGT+AGG | - | chr3_1:84637140-84637159 | Msa0382180:intron | 50.0% | |
| AGGTGAATCCTTTCCCACCA+TGG | - | chr3_1:84637228-84637247 | Msa0382180:intron | 50.0% | |
| GGTGAATCCTTTCCCACCAT+GGG | - | chr3_1:84637229-84637248 | Msa0382180:intron | 50.0% | |
| ! | TGATACAACGTCCTTGGTGC+CGG | - | chr3_1:84637647-84637666 | Msa0382180:intron | 50.0% |
| TTTACATGATGCCGGCACCA+AGG | + | chr3_1:84637661-84637680 | None:intergenic | 50.0% | |
| CTTATCCAGAAAGTCGTCGC+CGG | - | chr3_1:84637685-84637704 | Msa0382180:intron | 50.0% | |
| ! | ATTTTCCGGCGACGACTTTC+TGG | + | chr3_1:84637693-84637712 | None:intergenic | 50.0% |
| CAGTTGTCGGCGAATTCTAG+CGG | - | chr3_1:84637747-84637766 | Msa0382180:intron | 50.0% | |
| GCCATCTCCACTAGAATTGC+AGG | - | chr3_1:84637789-84637808 | Msa0382180:intron | 50.0% | |
| CCGCTAACCTGCAATTCTAG+TGG | + | chr3_1:84637799-84637818 | None:intergenic | 50.0% | |
| CTAGAATTGCAGGTTAGCGG+TGG | - | chr3_1:84637799-84637818 | Msa0382180:intron | 50.0% | |
| GAGGCAGCTACAATGTTTGC+AGG | + | chr3_1:84637842-84637861 | None:intergenic | 50.0% | |
| CAATCTCACCGGAATCTCGT+CGG | + | chr3_1:84638187-84638206 | None:intergenic | 50.0% | |
| CCTCCATGTGGCATTTACCA+TGG | + | chr3_1:84638368-84638387 | None:intergenic | 50.0% | |
| CCATGGTAAATGCCACATGG+AGG | - | chr3_1:84638365-84638384 | Msa0382180:intron | 50.0% | |
| TGCCCTAACGGCACATGTTA+AGG | - | chr3_1:84638564-84638583 | Msa0382180:intron | 50.0% | |
| GTCAATTATACCGGGACGGA+GGG | + | chr3_1:84638905-84638924 | None:intergenic | 50.0% | |
| ATTAGGTACTTCCTCCGTCC+CGG | + | chr3_1:84639077-84639096 | None:intergenic | 50.0% | |
| ! | GTGAGGTGTCCTAACAGTCA+TGG | - | chr3_1:84640286-84640305 | Msa0382180:intron | 50.0% |
| ! | CTTGGGAGCATGGGTTACTT+TGG | + | chr3_1:84640336-84640355 | None:intergenic | 50.0% |
| TCTAATAGTCCCCCGCAAGT+TGG | - | chr3_1:84640649-84640668 | Msa0382180:intron | 50.0% | |
| TGTGACCACCTTCCAACTTG+CGG | + | chr3_1:84640664-84640683 | None:intergenic | 50.0% | |
| ! | GCCGTGAAGTGCTACTGTTG+CGG | - | chr3_1:84632140-84632159 | Msa0382180:CDS | 55.0% |
| GCCGCAACAGTAGCACTTCA+CGG | + | chr3_1:84632144-84632163 | None:intergenic | 55.0% | |
| CTACTGTTGCGGCTTAACGG+AGG | - | chr3_1:84632151-84632170 | Msa0382180:CDS | 55.0% | |
| ATATCTAACCCGGGCAACGC+CGG | - | chr3_1:84634772-84634791 | Msa0382180:intron | 55.0% | |
| ! | TTTTGACCTGTGCGACGCAC+GGG | - | chr3_1:84635122-84635141 | Msa0382180:intron | 55.0% |
| TTGGGATGGCATCCATGTGC+AGG | + | chr3_1:84637167-84637186 | None:intergenic | 55.0% | |
| GGTTGTGAGGTTTGAGAGGG+TGG | + | chr3_1:84637372-84637391 | None:intergenic | 55.0% | |
| ! | TTTTCCAGCCGGTAACCTGC+AGG | - | chr3_1:84637716-84637735 | Msa0382180:intron | 55.0% |
| TAATCCTGCAGGTTACCGGC+TGG | + | chr3_1:84637723-84637742 | None:intergenic | 55.0% | |
| AGCCACGACCCTGCATAAAC+CGG | - | chr3_1:84637918-84637937 | Msa0382180:intron | 55.0% | |
| ATCCGGTTTATGCAGGGTCG+TGG | + | chr3_1:84637923-84637942 | None:intergenic | 55.0% | |
| ! | GCCCTCAAGGGCACATGTTA+AGG | + | chr3_1:84638687-84638706 | None:intergenic | 55.0% |
| GGTCAATTATACCGGGACGG+AGG | + | chr3_1:84638906-84638925 | None:intergenic | 55.0% | |
| GGTCAATTATTCCGGGACGG+AGG | - | chr3_1:84639063-84639082 | Msa0382180:intron | 55.0% | |
| !! | TGGTATCGGCTTGGGAGCAT+GGG | + | chr3_1:84640345-84640364 | None:intergenic | 55.0% |
| !! | ATGGTATCGGCTTGGGAGCA+TGG | + | chr3_1:84640346-84640365 | None:intergenic | 55.0% |
| ACGGAGAGCCTTCCATCCTT+TGG | - | chr3_1:84640373-84640392 | Msa0382180:intron | 55.0% | |
| ! | ATAGTCCCCCGCAAGTTGGA+AGG | - | chr3_1:84640653-84640672 | Msa0382180:intron | 55.0% |
| TGACCACCTTCCAACTTGCG+GGG | + | chr3_1:84640662-84640681 | None:intergenic | 55.0% | |
| GTGACCACCTTCCAACTTGC+GGG | + | chr3_1:84640663-84640682 | None:intergenic | 55.0% | |
| GCTCTTGGCCGATGTGTTTC+CGG | + | chr3_1:84640752-84640771 | None:intergenic | 55.0% | |
| GCTGTGCTTCTGTCCAAGGA+TGG | + | chr3_1:84641059-84641078 | None:intergenic | 55.0% | |
| ! | AAGCGCTGTGCTTCTGTCCA+AGG | + | chr3_1:84641063-84641082 | None:intergenic | 55.0% |
| GCCCACAAATCCAACGACCC+AGG | + | chr3_1:84632217-84632236 | None:intergenic | 60.0% | |
| TATCTAACCCGGGCAACGCC+GGG | - | chr3_1:84634773-84634792 | Msa0382180:intron | 60.0% | |
| TTTAGAGACCCGGCGTTGCC+CGG | + | chr3_1:84634784-84634803 | None:intergenic | 60.0% | |
| ATAAGACCCGTGCGTCGCAC+AGG | + | chr3_1:84635131-84635150 | None:intergenic | 60.0% | |
| ! | GTGCGACGCACGGGTCTTAT+CGG | - | chr3_1:84635131-84635150 | Msa0382180:intron | 60.0% |
| !! | TGAGAGGGTGGCGTTGGTGT+TGG | + | chr3_1:84637360-84637379 | None:intergenic | 60.0% |
| GAGGTTTGAGAGGGTGGCGT+TGG | + | chr3_1:84637366-84637385 | None:intergenic | 60.0% | |
| GACCACCTTCCAACTTGCGG+GGG | + | chr3_1:84640661-84640680 | None:intergenic | 60.0% | |
| AACCGAAACCGCGGCGACGA+TGG | - | chr3_1:84632109-84632128 | Msa0382180:CDS | 65.0% | |
| CTCCATCGTCGCCGCGGTTT+CGG | + | chr3_1:84632114-84632133 | None:intergenic | 65.0% | |
| TACCACCTCCATCGTCGCCG+CGG | + | chr3_1:84632120-84632139 | None:intergenic | 65.0% | |
| TTAGAGACCCGGCGTTGCCC+GGG | + | chr3_1:84634783-84634802 | None:intergenic | 65.0% | |
| CCAAGCTACTCCCTCCGTCC+CGG | - | chr3_1:84638892-84638911 | Msa0382180:intron | 65.0% | |
| ! | GTCCCCCGCAAGTTGGAAGG+TGG | - | chr3_1:84640656-84640675 | Msa0382180:intron | 65.0% |
| CGAAACCGCGGCGACGATGG+AGG | - | chr3_1:84632112-84632131 | Msa0382180:CDS | 70.0% | |
| AACCGCGGCGACGATGGAGG+TGG | - | chr3_1:84632115-84632134 | Msa0382180:CDS | 70.0% | |
| CCGGGACGGAGGGAGTAGCT+TGG | + | chr3_1:84638895-84638914 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 84632101 | 84641084 | 84632101 | ID=Msa0382180;Name=Msa0382180 |
| chr3_1 | mRNA | 84632101 | 84641084 | 84632101 | ID=Msa0382180-mRNA-1;Parent=Msa0382180;Name=Msa0382180-mRNA-1;_AED=0.45;_eAED=0.49;_QI=0|0|0|0.5|1|1|4|0|272 |
| chr3_1 | exon | 84640746 | 84641084 | 84640746 | ID=Msa0382180-mRNA-1:exon:22068;Parent=Msa0382180-mRNA-1 |
| chr3_1 | exon | 84639669 | 84639719 | 84639669 | ID=Msa0382180-mRNA-1:exon:22067;Parent=Msa0382180-mRNA-1 |
| chr3_1 | exon | 84635375 | 84635555 | 84635375 | ID=Msa0382180-mRNA-1:exon:22066;Parent=Msa0382180-mRNA-1 |
| chr3_1 | exon | 84632101 | 84632348 | 84632101 | ID=Msa0382180-mRNA-1:exon:22065;Parent=Msa0382180-mRNA-1 |
| chr3_1 | CDS | 84640746 | 84641084 | 84640746 | ID=Msa0382180-mRNA-1:cds;Parent=Msa0382180-mRNA-1 |
| chr3_1 | CDS | 84639669 | 84639719 | 84639669 | ID=Msa0382180-mRNA-1:cds;Parent=Msa0382180-mRNA-1 |
| chr3_1 | CDS | 84635375 | 84635555 | 84635375 | ID=Msa0382180-mRNA-1:cds;Parent=Msa0382180-mRNA-1 |
| chr3_1 | CDS | 84632101 | 84632348 | 84632101 | ID=Msa0382180-mRNA-1:cds;Parent=Msa0382180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
