Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382930 | XP_024625734.1 | 92.705 | 562 | 36 | 1 | 1 | 562 | 1 | 557 | 0.0 | 990 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382930 | sp|Q66GQ2|Y5162_ARATH | 36.603 | 418 | 168 | 8 | 16 | 358 | 17 | 412 | 4.90e-67 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382930 | A0A396H8E0 | 92.705 | 562 | 36 | 1 | 1 | 562 | 1 | 557 | 0.0 | 990 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001790 | Msa1382930 | 0.811060 | 8.457913e-51 | -8.615850e-47 |
| Msa0004920 | Msa1382930 | 0.801109 | 1.051292e-48 | -8.615850e-47 |
| Msa0011720 | Msa1382930 | 0.816989 | 4.161303e-52 | -8.615850e-47 |
| Msa0014800 | Msa1382930 | 0.825697 | 4.069184e-54 | -8.615850e-47 |
| Msa0023470 | Msa1382930 | 0.810233 | 1.276213e-50 | -8.615850e-47 |
| Msa0037700 | Msa1382930 | 0.806307 | 8.767607e-50 | -8.615850e-47 |
| Msa0048000 | Msa1382930 | 0.801128 | 1.041931e-48 | -8.615850e-47 |
| Msa0050760 | Msa1382930 | 0.801349 | 9.391442e-49 | -8.615850e-47 |
| Msa0053900 | Msa1382930 | 0.814347 | 1.613757e-51 | -8.615850e-47 |
| Msa0071240 | Msa1382930 | 0.809711 | 1.653204e-50 | -8.615850e-47 |
| Msa0089360 | Msa1382930 | 0.800224 | 1.593335e-48 | -8.615850e-47 |
| Msa0092990 | Msa1382930 | 0.811646 | 6.308390e-51 | -8.615850e-47 |
| Msa0099730 | Msa1382930 | 0.803881 | 2.821176e-49 | -8.615850e-47 |
| Msa0108560 | Msa1382930 | 0.827540 | 1.478457e-54 | -8.615850e-47 |
| Msa1371580 | Msa1382930 | 0.806715 | 7.189038e-50 | -8.615850e-47 |
| Msa1372580 | Msa1382930 | 0.816053 | 6.741970e-52 | -8.615850e-47 |
| Msa1378230 | Msa1382930 | 0.808651 | 2.789028e-50 | -8.615850e-47 |
| Msa1379710 | Msa1382930 | 0.809431 | 1.899036e-50 | -8.615850e-47 |
| Msa1382930 | Msa1384350 | 0.803937 | 2.746787e-49 | -8.615850e-47 |
| Msa1382930 | Msa1392260 | 0.804516 | 2.080531e-49 | -8.615850e-47 |
| Msa1382930 | Msa1393040 | 0.804142 | 2.489403e-49 | -8.615850e-47 |
| Msa1382930 | Msa1404540 | 0.804218 | 2.400862e-49 | -8.615850e-47 |
| Msa1382930 | Msa1419110 | 0.803963 | 2.712007e-49 | -8.615850e-47 |
| Msa1382930 | Msa1423450 | 0.815368 | 9.583486e-52 | -8.615850e-47 |
| Msa1382930 | Msa1424450 | 0.801119 | 1.046308e-48 | -8.615850e-47 |
| Msa1382930 | Msa1425010 | 0.850277 | 1.883588e-60 | -8.615850e-47 |
| Msa1382930 | Msa1427830 | 0.819569 | 1.084344e-52 | -8.615850e-47 |
| Msa1382930 | Msa1429900 | 0.814112 | 1.818313e-51 | -8.615850e-47 |
| Msa1382930 | Msa1435370 | 0.830983 | 2.160020e-55 | -8.615850e-47 |
| Msa1382930 | Msa1437680 | 0.849821 | 2.528003e-60 | -8.615850e-47 |
| Msa1382930 | Msa1438910 | 0.997078 | 1.530207e-236 | -8.615850e-47 |
| Msa1382930 | Msa1440000 | 0.809395 | 1.932414e-50 | -8.615850e-47 |
| Msa1382930 | Msa1440600 | 0.800711 | 1.268018e-48 | -8.615850e-47 |
| Msa1382930 | Msa1440910 | 0.836760 | 7.747926e-57 | -8.615850e-47 |
| Msa1382930 | Msa1444250 | -0.809162 | 2.167948e-50 | -8.615850e-47 |
| Msa1382930 | Msa1450020 | 0.804422 | 2.176653e-49 | -8.615850e-47 |
| Msa1382930 | Msa1451620 | -0.803510 | 3.368355e-49 | -8.615850e-47 |
| Msa1382930 | Msa1454110 | 0.818882 | 1.554520e-52 | -8.615850e-47 |
| Msa1382930 | Msa1454860 | 0.802414 | 5.673875e-49 | -8.615850e-47 |
| Msa1382930 | Msa1464940 | 0.806930 | 6.476699e-50 | -8.615850e-47 |
| Msa0606360 | Msa1382930 | 0.802675 | 5.013334e-49 | -8.615850e-47 |
| Msa0608710 | Msa1382930 | 0.808370 | 3.201873e-50 | -8.615850e-47 |
| Msa0610590 | Msa1382930 | 0.803167 | 3.966186e-49 | -8.615850e-47 |
| Msa0615310 | Msa1382930 | 0.813939 | 1.985875e-51 | -8.615850e-47 |
| Msa0617830 | Msa1382930 | 0.809109 | 2.225954e-50 | -8.615850e-47 |
| Msa0628740 | Msa1382930 | 0.813774 | 2.158782e-51 | -8.615850e-47 |
| Msa0633060 | Msa1382930 | 0.814059 | 1.867764e-51 | -8.615850e-47 |
| Msa0638280 | Msa1382930 | 0.802055 | 6.725952e-49 | -8.615850e-47 |
| Msa0638320 | Msa1382930 | 0.812517 | 4.073830e-51 | -8.615850e-47 |
| Msa0647830 | Msa1382930 | 0.819760 | 9.808214e-53 | -8.615850e-47 |
| Msa0651190 | Msa1382930 | 0.801152 | 1.030255e-48 | -8.615850e-47 |
| Msa0651270 | Msa1382930 | 0.800448 | 1.434549e-48 | -8.615850e-47 |
| Msa0651790 | Msa1382930 | 0.802982 | 4.332031e-49 | -8.615850e-47 |
| Msa0653490 | Msa1382930 | 0.805822 | 1.108618e-49 | -8.615850e-47 |
| Msa0654720 | Msa1382930 | 0.829570 | 4.781548e-55 | -8.615850e-47 |
| Msa0660300 | Msa1382930 | 0.822805 | 1.945980e-53 | -8.615850e-47 |
| Msa0662650 | Msa1382930 | 0.815250 | 1.018110e-51 | -8.615850e-47 |
| Msa0666140 | Msa1382930 | 0.802929 | 4.441839e-49 | -8.615850e-47 |
| Msa0677270 | Msa1382930 | 0.808778 | 2.619725e-50 | -8.615850e-47 |
| Msa0678820 | Msa1382930 | 0.814571 | 1.439502e-51 | -8.615850e-47 |
| Msa0688670 | Msa1382930 | 0.978558 | 4.447124e-146 | -8.615850e-47 |
| Msa0690440 | Msa1382930 | 0.808127 | 3.608082e-50 | -8.615850e-47 |
| Msa0692230 | Msa1382930 | 0.809394 | 1.934219e-50 | -8.615850e-47 |
| Msa0693380 | Msa1382930 | 0.811354 | 7.301879e-51 | -8.615850e-47 |
| Msa0694250 | Msa1382930 | 0.816472 | 5.434770e-52 | -8.615850e-47 |
| Msa0697140 | Msa1382930 | 0.812525 | 4.058846e-51 | -8.615850e-47 |
| Msa0698360 | Msa1382930 | 0.836867 | 7.272974e-57 | -8.615850e-47 |
| Msa0708860 | Msa1382930 | 0.816174 | 6.335422e-52 | -8.615850e-47 |
| Msa0712080 | Msa1382930 | 0.820346 | 7.200581e-53 | -8.615850e-47 |
| Msa0714340 | Msa1382930 | 0.825085 | 5.681638e-54 | -8.615850e-47 |
| Msa0714380 | Msa1382930 | 0.812336 | 4.461897e-51 | -8.615850e-47 |
| Msa0722930 | Msa1382930 | 0.812263 | 4.628786e-51 | -8.615850e-47 |
| Msa0723140 | Msa1382930 | 0.808900 | 2.466831e-50 | -8.615850e-47 |
| Msa0724560 | Msa1382930 | 0.839034 | 2.017483e-57 | -8.615850e-47 |
| Msa0724830 | Msa1382930 | 0.814050 | 1.876737e-51 | -8.615850e-47 |
| Msa0726860 | Msa1382930 | 0.811302 | 7.493144e-51 | -8.615850e-47 |
| Msa0731180 | Msa1382930 | 0.819143 | 1.355868e-52 | -8.615850e-47 |
| Msa0749930 | Msa1382930 | 0.853583 | 2.170676e-61 | -8.615850e-47 |
| Msa0750430 | Msa1382930 | 0.807927 | 3.978409e-50 | -8.615850e-47 |
| Msa0756310 | Msa1382930 | 0.827192 | 1.791979e-54 | -8.615850e-47 |
| Msa0765380 | Msa1382930 | 0.802325 | 5.920149e-49 | -8.615850e-47 |
| Msa0767220 | Msa1382930 | 0.806931 | 6.471513e-50 | -8.615850e-47 |
| Msa0771720 | Msa1382930 | 0.823270 | 1.516133e-53 | -8.615850e-47 |
| Msa0788710 | Msa1382930 | 0.808125 | 3.611992e-50 | -8.615850e-47 |
| Msa0789270 | Msa1382930 | 0.801809 | 7.558166e-49 | -8.615850e-47 |
| Msa0789290 | Msa1382930 | 0.800603 | 1.333634e-48 | -8.615850e-47 |
| Msa0789300 | Msa1382930 | 0.802875 | 4.557439e-49 | -8.615850e-47 |
| Msa0790510 | Msa1382930 | 0.801263 | 9.778389e-49 | -8.615850e-47 |
| Msa0795080 | Msa1382930 | 0.810377 | 1.187858e-50 | -8.615850e-47 |
| Msa0830420 | Msa1382930 | 0.854298 | 1.350715e-61 | -8.615850e-47 |
| Msa0835730 | Msa1382930 | 0.830990 | 2.150368e-55 | -8.615850e-47 |
| Msa0122590 | Msa1382930 | 0.806583 | 7.664632e-50 | -8.615850e-47 |
| Msa0147920 | Msa1382930 | 0.806665 | 7.365660e-50 | -8.615850e-47 |
| Msa0148360 | Msa1382930 | 0.816895 | 4.368165e-52 | -8.615850e-47 |
| Msa0166870 | Msa1382930 | 0.808408 | 3.143003e-50 | -8.615850e-47 |
| Msa0178860 | Msa1382930 | -0.814931 | 1.198227e-51 | -8.615850e-47 |
| Msa0188630 | Msa1382930 | 0.815355 | 9.644426e-52 | -8.615850e-47 |
| Msa0188830 | Msa1382930 | 0.800970 | 1.122741e-48 | -8.615850e-47 |
| Msa0220440 | Msa1382930 | 0.823738 | 1.178475e-53 | -8.615850e-47 |
| Msa0222340 | Msa1382930 | 0.808524 | 2.969053e-50 | -8.615850e-47 |
| Msa0223380 | Msa1382930 | 0.808836 | 2.546122e-50 | -8.615850e-47 |
| Msa0233610 | Msa1382930 | 0.811189 | 7.928724e-51 | -8.615850e-47 |
| Msa0236440 | Msa1382930 | 0.829172 | 5.971141e-55 | -8.615850e-47 |
| Msa1230830 | Msa1382930 | 0.810768 | 9.779520e-51 | -8.615850e-47 |
| Msa1233500 | Msa1382930 | 0.854490 | 1.188815e-61 | -8.615850e-47 |
| Msa1258380 | Msa1382930 | -0.809267 | 2.058933e-50 | -8.615850e-47 |
| Msa1267260 | Msa1382930 | 0.810180 | 1.310184e-50 | -8.615850e-47 |
| Msa1276440 | Msa1382930 | 0.807213 | 5.642297e-50 | -8.615850e-47 |
| Msa1279210 | Msa1382930 | 0.838891 | 2.196112e-57 | -8.615850e-47 |
| Msa1282920 | Msa1382930 | 0.837581 | 4.778338e-57 | -8.615850e-47 |
| Msa1292730 | Msa1382930 | 0.803020 | 4.254527e-49 | -8.615850e-47 |
| Msa1294480 | Msa1382930 | 0.819468 | 1.143378e-52 | -8.615850e-47 |
| Msa1297090 | Msa1382930 | 0.806005 | 1.014967e-49 | -8.615850e-47 |
| Msa1300350 | Msa1382930 | -0.807306 | 5.391105e-50 | -8.615850e-47 |
| Msa1306750 | Msa1382930 | 0.841706 | 4.038092e-58 | -8.615850e-47 |
| Msa1307740 | Msa1382930 | 0.843192 | 1.629424e-58 | -8.615850e-47 |
| Msa1314340 | Msa1382930 | 0.825318 | 5.004055e-54 | -8.615850e-47 |
| Msa1322190 | Msa1382930 | 0.848760 | 4.990800e-60 | -8.615850e-47 |
| Msa1327550 | Msa1382930 | 0.801267 | 9.759299e-49 | -8.615850e-47 |
| Msa1328700 | Msa1382930 | 0.845516 | 3.868114e-59 | -8.615850e-47 |
| Msa1328850 | Msa1382930 | 0.822808 | 1.943019e-53 | -8.615850e-47 |
| Msa1333410 | Msa1382930 | 0.802344 | 5.865788e-49 | -8.615850e-47 |
| Msa1333710 | Msa1382930 | 0.804909 | 1.722810e-49 | -8.615850e-47 |
| Msa1333810 | Msa1382930 | 0.812229 | 4.708360e-51 | -8.615850e-47 |
| Msa1340650 | Msa1382930 | 0.820504 | 6.623712e-53 | -8.615850e-47 |
| Msa0372660 | Msa1382930 | 0.805331 | 1.405399e-49 | -8.615850e-47 |
| Msa0379640 | Msa1382930 | 0.832986 | 6.912922e-56 | -8.615850e-47 |
| Msa0388840 | Msa1382930 | 0.810341 | 1.209380e-50 | -8.615850e-47 |
| Msa0389340 | Msa1382930 | 0.805815 | 1.112461e-49 | -8.615850e-47 |
| Msa0389810 | Msa1382930 | 0.842130 | 3.119337e-58 | -8.615850e-47 |
| Msa0419620 | Msa1382930 | -0.840957 | 6.358758e-58 | -8.615850e-47 |
| Msa0428930 | Msa1382930 | 0.816735 | 4.744507e-52 | -8.615850e-47 |
| Msa0464900 | Msa1382930 | 0.835574 | 1.550475e-56 | -8.615850e-47 |
| Msa0465680 | Msa1382930 | -0.822054 | 2.907484e-53 | -8.615850e-47 |
| Msa0468130 | Msa1382930 | 0.840079 | 1.078816e-57 | -8.615850e-47 |
| Msa0475410 | Msa1382930 | 0.803562 | 3.285601e-49 | -8.615850e-47 |
| Msa0475490 | Msa1382930 | 0.816122 | 6.505999e-52 | -8.615850e-47 |
| Msa0477130 | Msa1382930 | -0.823951 | 1.050251e-53 | -8.615850e-47 |
| Msa0482190 | Msa1382930 | -0.812263 | 4.628786e-51 | -8.615850e-47 |
| Msa0982270 | Msa1382930 | 0.850900 | 1.259051e-60 | -8.615850e-47 |
| Msa0999040 | Msa1382930 | 0.835139 | 1.996896e-56 | -8.615850e-47 |
| Msa1000020 | Msa1382930 | 0.804345 | 2.258792e-49 | -8.615850e-47 |
| Msa1002480 | Msa1382930 | 0.972584 | 5.259378e-135 | -8.615850e-47 |
| Msa1005410 | Msa1382930 | 0.801380 | 9.253068e-49 | -8.615850e-47 |
| Msa1021540 | Msa1382930 | 0.829528 | 4.893597e-55 | -8.615850e-47 |
| Msa1037700 | Msa1382930 | -0.829949 | 3.866104e-55 | -8.615850e-47 |
| Msa1039880 | Msa1382930 | 0.808457 | 3.068067e-50 | -8.615850e-47 |
| Msa1070850 | Msa1382930 | 0.817099 | 3.929994e-52 | -8.615850e-47 |
| Msa1080790 | Msa1382930 | 0.807178 | 5.739788e-50 | -8.615850e-47 |
| Msa1082500 | Msa1382930 | 0.821849 | 3.243455e-53 | -8.615850e-47 |
| Msa1092090 | Msa1382930 | 0.849886 | 2.424519e-60 | -8.615850e-47 |
| Msa1100480 | Msa1382930 | 0.830180 | 3.396351e-55 | -8.615850e-47 |
| Msa0243690 | Msa1382930 | 0.802201 | 6.278627e-49 | -8.615850e-47 |
| Msa0260810 | Msa1382930 | 0.804661 | 1.940696e-49 | -8.615850e-47 |
| Msa0269280 | Msa1382930 | 0.803098 | 4.099979e-49 | -8.615850e-47 |
| Msa0269450 | Msa1382930 | 0.817746 | 2.810650e-52 | -8.615850e-47 |
| Msa0270100 | Msa1382930 | 0.816046 | 6.768218e-52 | -8.615850e-47 |
| Msa0270270 | Msa1382930 | 0.816488 | 5.390414e-52 | -8.615850e-47 |
| Msa0282170 | Msa1382930 | 0.809527 | 1.810387e-50 | -8.615850e-47 |
| Msa0282250 | Msa1382930 | 0.822872 | 1.877550e-53 | -8.615850e-47 |
| Msa0299580 | Msa1382930 | 0.821990 | 3.009213e-53 | -8.615850e-47 |
| Msa0309550 | Msa1382930 | 0.814887 | 1.225279e-51 | -8.615850e-47 |
| Msa0323180 | Msa1382930 | 0.831488 | 1.622619e-55 | -8.615850e-47 |
| Msa1118110 | Msa1382930 | 0.813965 | 1.959642e-51 | -8.615850e-47 |
| Msa1118750 | Msa1382930 | 0.808309 | 3.299240e-50 | -8.615850e-47 |
| Msa1118930 | Msa1382930 | 0.813205 | 2.879132e-51 | -8.615850e-47 |
| Msa1124540 | Msa1382930 | -0.811668 | 6.241115e-51 | -8.615850e-47 |
| Msa1130110 | Msa1382930 | 0.977233 | 2.258519e-143 | -8.615850e-47 |
| Msa1130210 | Msa1382930 | -0.813891 | 2.034974e-51 | -8.615850e-47 |
| Msa1132950 | Msa1382930 | 0.802187 | 6.317662e-49 | -8.615850e-47 |
| Msa1142500 | Msa1382930 | 0.807305 | 5.393482e-50 | -8.615850e-47 |
| Msa1143270 | Msa1382930 | 0.811283 | 7.563314e-51 | -8.615850e-47 |
| Msa1148130 | Msa1382930 | 0.816963 | 4.217290e-52 | -8.615850e-47 |
| Msa1158670 | Msa1382930 | 0.825378 | 4.844208e-54 | -8.615850e-47 |
| Msa1172670 | Msa1382930 | 0.825536 | 4.443072e-54 | -8.615850e-47 |
| Msa1187520 | Msa1382930 | 0.819118 | 1.373459e-52 | -8.615850e-47 |
| Msa1199560 | Msa1382930 | 0.841796 | 3.824518e-58 | -8.615850e-47 |
| Msa1201560 | Msa1382930 | 0.806986 | 6.299975e-50 | -8.615850e-47 |
| Msa1205130 | Msa1382930 | 0.800876 | 1.173512e-48 | -8.615850e-47 |
| Msa1206020 | Msa1382930 | 0.819542 | 1.099709e-52 | -8.615850e-47 |
| Msa1207380 | Msa1382930 | 0.816265 | 6.045523e-52 | -8.615850e-47 |
| Msa1207420 | Msa1382930 | 0.802393 | 5.732279e-49 | -8.615850e-47 |
| Msa1208180 | Msa1382930 | 0.809323 | 2.002653e-50 | -8.615850e-47 |
| Msa1214880 | Msa1382930 | 0.800806 | 1.212605e-48 | -8.615850e-47 |
| Msa1217660 | Msa1382930 | 0.828234 | 1.006856e-54 | -8.615850e-47 |
| Msa1217810 | Msa1382930 | 0.861424 | 1.035794e-63 | -8.615850e-47 |
| Msa1217830 | Msa1382930 | 0.827716 | 1.341735e-54 | -8.615850e-47 |
| Msa1224500 | Msa1382930 | 0.823079 | 1.680381e-53 | -8.615850e-47 |
| Msa0484780 | Msa1382930 | 0.832292 | 1.027215e-55 | -8.615850e-47 |
| Msa0485120 | Msa1382930 | 0.808325 | 3.273549e-50 | -8.615850e-47 |
| Msa0485500 | Msa1382930 | -0.807869 | 4.094082e-50 | -8.615850e-47 |
| Msa0489030 | Msa1382930 | 0.811896 | 5.564884e-51 | -8.615850e-47 |
| Msa0502100 | Msa1382930 | 0.810805 | 9.600299e-51 | -8.615850e-47 |
| Msa0511720 | Msa1382930 | -0.843969 | 1.010003e-58 | -8.615850e-47 |
| Msa0527250 | Msa1382930 | 0.806828 | 6.804020e-50 | -8.615850e-47 |
| Msa0532710 | Msa1382930 | 0.803145 | 4.009256e-49 | -8.615850e-47 |
| Msa0543900 | Msa1382930 | 0.810133 | 1.341011e-50 | -8.615850e-47 |
| Msa0553460 | Msa1382930 | 0.816088 | 6.621509e-52 | -8.615850e-47 |
| Msa0558690 | Msa1382930 | 0.800996 | 1.108703e-48 | -8.615850e-47 |
| Msa0561230 | Msa1382930 | 0.830319 | 3.139648e-55 | -8.615850e-47 |
| Msa0575470 | Msa1382930 | 0.854460 | 1.213274e-61 | -8.615850e-47 |
| Msa0579130 | Msa1382930 | 0.802391 | 5.735899e-49 | -8.615850e-47 |
| Msa0599580 | Msa1382930 | 0.821809 | 3.314307e-53 | -8.615850e-47 |
| Msa0599770 | Msa1382930 | 0.811632 | 6.354036e-51 | -8.615850e-47 |
| Msa0848900 | Msa1382930 | 0.837314 | 5.591058e-57 | -8.615850e-47 |
| Msa0869120 | Msa1382930 | 0.817286 | 3.567831e-52 | -8.615850e-47 |
| Msa0877410 | Msa1382930 | 0.833470 | 5.236001e-56 | -8.615850e-47 |
| Msa0881020 | Msa1382930 | 0.804927 | 1.707853e-49 | -8.615850e-47 |
| Msa0882510 | Msa1382930 | 0.812848 | 3.448843e-51 | -8.615850e-47 |
| Msa0896750 | Msa1382930 | 0.804648 | 1.953347e-49 | -8.615850e-47 |
| Msa0899230 | Msa1382930 | 0.818709 | 1.701257e-52 | -8.615850e-47 |
| Msa0908170 | Msa1382930 | 0.831437 | 1.669894e-55 | -8.615850e-47 |
| Msa0910980 | Msa1382930 | -0.821755 | 3.411322e-53 | -8.615850e-47 |
| Msa0923330 | Msa1382930 | 0.800404 | 1.464511e-48 | -8.615850e-47 |
| Msa0927670 | Msa1382930 | 0.833891 | 4.110106e-56 | -8.615850e-47 |
| Msa0930140 | Msa1382930 | 0.800327 | 1.518056e-48 | -8.615850e-47 |
| Msa0933230 | Msa1382930 | 0.806802 | 6.891254e-50 | -8.615850e-47 |
| Msa0933310 | Msa1382930 | 0.807033 | 6.159683e-50 | -8.615850e-47 |
| Msa0944550 | Msa1382930 | 0.829012 | 6.531173e-55 | -8.615850e-47 |
| Msa0944770 | Msa1382930 | 0.812118 | 4.980503e-51 | -8.615850e-47 |
| Msa0952020 | Msa1382930 | 0.802205 | 6.266458e-49 | -8.615850e-47 |
| Msa0960160 | Msa1382930 | 0.832566 | 8.786926e-56 | -8.615850e-47 |
| Msa0961420 | Msa1382930 | -0.801126 | 1.043168e-48 | -8.615850e-47 |
| Msa0962770 | Msa1382930 | 0.810117 | 1.352020e-50 | -8.615850e-47 |
| Msa0965520 | Msa1382930 | 0.821185 | 4.617180e-53 | -8.615850e-47 |
| Msa0971090 | Msa1382930 | 0.801923 | 7.160376e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382930 | MtrunA17_Chr7g0275251 | 92.705 | 562 | 36 | 1 | 1 | 562 | 1 | 557 | 0.0 | 990 |
| Msa1382930 | MtrunA17_Chr8g0347871 | 42.061 | 592 | 251 | 16 | 15 | 561 | 14 | 558 | 3.62e-119 | 363 |
| Msa1382930 | MtrunA17_Chr5g0397031 | 41.873 | 363 | 145 | 8 | 54 | 358 | 60 | 414 | 6.48e-74 | 248 |
| Msa1382930 | MtrunA17_Chr7g0266861 | 27.488 | 422 | 201 | 14 | 22 | 357 | 36 | 438 | 3.50e-25 | 110 |
| Msa1382930 | MtrunA17_Chr3g0098801 | 26.996 | 263 | 178 | 6 | 135 | 396 | 199 | 448 | 4.55e-22 | 100 |
| Msa1382930 | MtrunA17_Chr5g0444041 | 29.130 | 230 | 149 | 3 | 129 | 358 | 188 | 403 | 5.63e-22 | 100 |
| Msa1382930 | MtrunA17_Chr4g0026051 | 25.879 | 398 | 222 | 12 | 22 | 356 | 48 | 435 | 8.33e-19 | 90.1 |
| Msa1382930 | MtrunA17_Chr2g0321731 | 26.766 | 269 | 183 | 5 | 116 | 379 | 205 | 464 | 3.30e-17 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1382930 | AT5G41620.1 | 36.603 | 418 | 168 | 8 | 16 | 358 | 17 | 412 | 4.99e-68 | 231 |
| Msa1382930 | AT5G41620.4 | 42.857 | 294 | 137 | 3 | 92 | 358 | 6 | 295 | 6.63e-64 | 218 |
| Msa1382930 | AT5G41620.3 | 42.857 | 294 | 137 | 3 | 92 | 358 | 6 | 295 | 6.63e-64 | 218 |
| Msa1382930 | AT1G64180.1 | 31.250 | 560 | 285 | 15 | 62 | 554 | 61 | 587 | 6.51e-58 | 204 |
| Msa1382930 | AT5G41620.2 | 46.847 | 222 | 112 | 2 | 139 | 358 | 36 | 253 | 2.57e-54 | 191 |
| Msa1382930 | AT2G46250.1 | 35.207 | 338 | 157 | 7 | 27 | 329 | 20 | 330 | 8.05e-41 | 154 |
| Msa1382930 | AT3G11590.1 | 29.647 | 425 | 206 | 11 | 13 | 357 | 35 | 446 | 5.54e-35 | 139 |
| Msa1382930 | AT2G46250.2 | 40.580 | 207 | 102 | 2 | 123 | 329 | 54 | 239 | 7.99e-33 | 130 |
| Msa1382930 | AT3G11590.2 | 33.790 | 219 | 141 | 2 | 139 | 357 | 70 | 284 | 4.34e-27 | 114 |
| Msa1382930 | AT1G50660.1 | 27.574 | 272 | 173 | 8 | 129 | 396 | 212 | 463 | 3.38e-25 | 110 |
| Msa1382930 | AT3G20350.1 | 24.852 | 338 | 217 | 10 | 75 | 396 | 140 | 456 | 3.52e-24 | 107 |
Find 108 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCCTTGACTTCTTTAA+TGG | 0.167681 | tig0020543:-49054 | None:intergenic |
| GGTGGAAAAGTTGAAACTTT+TGG | 0.234292 | tig0020543:+47109 | Msa1382930:CDS |
| AGTAAAAGACAATACATTTA+TGG | 0.302608 | tig0020543:+49550 | Msa1382930:CDS |
| TTCATAATCTCTTACTCCTT+TGG | 0.317548 | tig0020543:-48784 | None:intergenic |
| TCACCCTTGCCTACCTTCAT+TGG | 0.324543 | tig0020543:+49076 | Msa1382930:CDS |
| GCGGATAAGGATCGCATTAA+TGG | 0.328056 | tig0020543:+48837 | Msa1382930:CDS |
| GAGGGGAAATCAAGTGAAAT+TGG | 0.348447 | tig0020543:+49221 | Msa1382930:CDS |
| CCATTCTGCAGTTACAGTTA+AGG | 0.372039 | tig0020543:+49445 | Msa1382930:CDS |
| TCAAAATTTCAAGTTGAAGA+TGG | 0.377914 | tig0020543:+47043 | Msa1382930:exon |
| ATTGAGCTAAGGCAATTAGA+AGG | 0.381758 | tig0020543:-48029 | None:intergenic |
| TTCTAATTGCCTTAGCTCAA+TGG | 0.385938 | tig0020543:+48031 | Msa1382930:CDS |
| CACTAGCCAGCTTCTGATAC+AGG | 0.387417 | tig0020543:-48662 | None:intergenic |
| TACTTCACATTTCAGAGGCT+TGG | 0.392687 | tig0020543:+48880 | Msa1382930:CDS |
| ATTGGATTCCTTTCAACTAA+AGG | 0.395468 | tig0020543:+49094 | Msa1382930:CDS |
| ACTGCTTGAAGCAAGGTTAG+AGG | 0.396153 | tig0020543:+49577 | Msa1382930:CDS |
| GAAAATGAATAAGCAGGAAA+TGG | 0.398382 | tig0020543:+48506 | Msa1382930:CDS |
| CATTCTGCAGTTACAGTTAA+GGG | 0.406187 | tig0020543:+49446 | Msa1382930:CDS |
| TTGGAGAAGAGAGGAGGAAG+AGG | 0.410484 | tig0020543:+47128 | Msa1382930:CDS |
| AGACTGAGACATGTTGAAAT+CGG | 0.412710 | tig0020543:-49507 | None:intergenic |
| GAAAAGGGAAGAAGGAATAA+TGG | 0.415845 | tig0020543:+47088 | Msa1382930:CDS |
| TGTTTCCAACTAACTGTTCA+AGG | 0.418652 | tig0020543:-49358 | None:intergenic |
| TATGCATAATAGTGCGGATA+AGG | 0.427280 | tig0020543:+48824 | Msa1382930:CDS |
| CACAGCCTTGAACAGTTAGT+TGG | 0.447691 | tig0020543:+49353 | Msa1382930:CDS |
| TAGCCGGCGTCTTGAAGAAC+AGG | 0.450663 | tig0020543:+48398 | Msa1382930:CDS |
| ATGTGATTCTATTCTACAAA+AGG | 0.451168 | tig0020543:-49690 | None:intergenic |
| TATATCCTGAGAGTATTTGC+AGG | 0.458388 | tig0020543:+49408 | Msa1382930:CDS |
| CTTAACAAGTGCTTTGTTGA+GGG | 0.464066 | tig0020543:+49203 | Msa1382930:CDS |
| CCAACAAGTTTGAACAGAAA+AGG | 0.465731 | tig0020543:+49165 | Msa1382930:CDS |
| TATTGTCTCCTTTAGTTGAA+AGG | 0.466986 | tig0020543:-49102 | None:intergenic |
| ATCAGTCGACAGAAATTGTT+CGG | 0.469683 | tig0020543:+47989 | Msa1382930:CDS |
| TTTGTCATCAGAAGGTGATA+AGG | 0.472314 | tig0020543:+49385 | Msa1382930:CDS |
| TATGAGGAGGCTCATGGTGG+TGG | 0.473227 | tig0020543:-47292 | None:intergenic |
| GAAATCTCTGTGCTAAACTC+TGG | 0.476454 | tig0020543:+47258 | Msa1382930:CDS |
| AACTCTTGTTGATGAGAAGA+AGG | 0.480434 | tig0020543:-47200 | None:intergenic |
| GTGACATGAATTAATTCCCT+TGG | 0.485875 | tig0020543:-49333 | None:intergenic |
| AGAAAAGAAAATGAATAAGC+AGG | 0.487246 | tig0020543:+48500 | Msa1382930:CDS |
| TTAATGGTGATAGCCTTGAT+AGG | 0.491514 | tig0020543:+48853 | Msa1382930:CDS |
| TACTTACTTCCATTGAGCTA+AGG | 0.494927 | tig0020543:-48040 | None:intergenic |
| GAGAACCTTGACTAACTCTC+TGG | 0.496123 | tig0020543:-48370 | None:intergenic |
| AAAGTCCACCAGAAAATGAT+AGG | 0.498720 | tig0020543:+49303 | Msa1382930:CDS |
| CCTTGACTTCTTTAATGGAG+GGG | 0.499105 | tig0020543:-49049 | None:intergenic |
| TCCTTGACTTCTTTAATGGA+GGG | 0.499288 | tig0020543:-49050 | None:intergenic |
| AGGAAGAGATTGAAGATGAA+AGG | 0.499321 | tig0020543:+48616 | Msa1382930:CDS |
| CTCGAGTCTCTAGCAGATGC+TGG | 0.502686 | tig0020543:-47930 | None:intergenic |
| AAGCAAGTTCAAGATGGTAT+TGG | 0.504529 | tig0020543:+48924 | Msa1382930:CDS |
| AGAAGAGAGGAGGAAGAGGA+AGG | 0.512890 | tig0020543:+47132 | Msa1382930:CDS |
| TTCCTTGACTTCTTTAATGG+AGG | 0.515224 | tig0020543:-49051 | None:intergenic |
| GACTGAGACATGTTGAAATC+GGG | 0.515513 | tig0020543:-49506 | None:intergenic |
| CATCACACAAATTCTCCAAA+AGG | 0.518761 | tig0020543:-48755 | None:intergenic |
| AGAAAGCCTGTATCAGAAGC+TGG | 0.520623 | tig0020543:+48656 | Msa1382930:CDS |
| GTCTACTAACAAATTACCTA+GGG | 0.524454 | tig0020543:+49526 | Msa1382930:CDS |
| CACCAGAAAATGATAGGTGC+AGG | 0.525944 | tig0020543:+49309 | Msa1382930:CDS |
| CCCCTCCATTAAAGAAGTCA+AGG | 0.526840 | tig0020543:+49049 | Msa1382930:CDS |
| AGTTGAAAGGAATCCAATGA+AGG | 0.527897 | tig0020543:-49089 | None:intergenic |
| TTCAAACTTGTTGGTACCAA+CGG | 0.528206 | tig0020543:-49156 | None:intergenic |
| CAACTATTGAATGTGTCTCT+AGG | 0.530200 | tig0020543:-48956 | None:intergenic |
| TGTGAAGTATTAGCCTATCA+AGG | 0.530785 | tig0020543:-48866 | None:intergenic |
| AACAGTTCTTTGTCATCAGA+AGG | 0.531010 | tig0020543:+49377 | Msa1382930:CDS |
| AATAGTGAAAGCTCTGATAG+TGG | 0.535399 | tig0020543:+48437 | Msa1382930:CDS |
| GCTTCCTCGGCAAAATTATG+AGG | 0.538410 | tig0020543:-49131 | None:intergenic |
| GGTACCAACGGAAGCTTCCT+CGG | 0.539258 | tig0020543:-49144 | None:intergenic |
| TGTATGGAGAAAAGGGAAGA+AGG | 0.539368 | tig0020543:+47080 | Msa1382930:CDS |
| CCTTAACTGTAACTGCAGAA+TGG | 0.540574 | tig0020543:-49445 | None:intergenic |
| TCTTCCCTGCAAATACTCTC+AGG | 0.540737 | tig0020543:-49413 | None:intergenic |
| AAATCTCTGTGCTAAACTCT+GGG | 0.540999 | tig0020543:+47259 | Msa1382930:CDS |
| ACTTAACAAGTGCTTTGTTG+AGG | 0.542539 | tig0020543:+49202 | Msa1382930:CDS |
| AGTCTACTAACAAATTACCT+AGG | 0.542626 | tig0020543:+49525 | Msa1382930:CDS |
| GTTCAACACCACCACCCACT+TGG | 0.555840 | tig0020543:+47162 | Msa1382930:CDS |
| TTGAGCTAAGGCAATTAGAA+GGG | 0.559447 | tig0020543:-48028 | None:intergenic |
| TTAACAAGTGCTTTGTTGAG+GGG | 0.561075 | tig0020543:+49204 | Msa1382930:CDS |
| TGGCAAAACTGCTTGAAGCA+AGG | 0.561650 | tig0020543:+49570 | Msa1382930:CDS |
| ACAAGTCTCCAAGTGGGTGG+TGG | 0.563442 | tig0020543:-47170 | None:intergenic |
| TCACACAAAGTTGATTCTCT+AGG | 0.566264 | tig0020543:-49272 | None:intergenic |
| ACTAGATCTTTCTCAAACAC+AGG | 0.567197 | tig0020543:+48461 | Msa1382930:CDS |
| TCAAGGTTCTCAAACGTAGC+CGG | 0.567882 | tig0020543:+48382 | Msa1382930:CDS |
| GCTAATACTTCACATTTCAG+AGG | 0.570361 | tig0020543:+48875 | Msa1382930:CDS |
| TCATAGTAGTCCCTCTCACC+AGG | 0.572281 | tig0020543:+47316 | Msa1382930:CDS |
| CAAATGAAGCAAGTTCAAGA+TGG | 0.575876 | tig0020543:+48918 | Msa1382930:CDS |
| AAATGATAGGTGCAGGACCA+AGG | 0.580181 | tig0020543:+49316 | Msa1382930:CDS |
| GAGGGACTACTATGACTATG+AGG | 0.581362 | tig0020543:-47308 | None:intergenic |
| GAATCCAATGAAGGTAGGCA+AGG | 0.585447 | tig0020543:-49080 | None:intergenic |
| AAGAGATTGAAGATGAAAGG+AGG | 0.590101 | tig0020543:+48619 | Msa1382930:CDS |
| AGCTGTAGTTCAATCAGTCA+AGG | 0.591551 | tig0020543:+48596 | Msa1382930:CDS |
| AATGATAGGTGCAGGACCAA+GGG | 0.594126 | tig0020543:+49317 | Msa1382930:CDS |
| TATGACTATGAGGAGGCTCA+TGG | 0.595092 | tig0020543:-47298 | None:intergenic |
| ATGAGGAGGCTCATGGTGGT+GGG | 0.595906 | tig0020543:-47291 | None:intergenic |
| AAGAAAAGTACCTGGTGAGA+GGG | 0.598007 | tig0020543:-47326 | None:intergenic |
| CAAGAAAAGTACCTGGTGAG+AGG | 0.598348 | tig0020543:-47327 | None:intergenic |
| GGAAATCAAGTGAAATTGGA+AGG | 0.599065 | tig0020543:+49225 | Msa1382930:CDS |
| TCTTCTTGTTGACACACACA+CGG | 0.600674 | tig0020543:+46968 | None:intergenic |
| TTCTATTATGCATAATAGTG+CGG | 0.602383 | tig0020543:+48818 | Msa1382930:CDS |
| TTTGCCGAGGAAGCTTCCGT+TGG | 0.615175 | tig0020543:+49140 | Msa1382930:CDS |
| GAAAGGAATCCAATGAAGGT+AGG | 0.616541 | tig0020543:-49085 | None:intergenic |
| AAGGGAAGAAGGAATAATGG+TGG | 0.618908 | tig0020543:+47091 | Msa1382930:CDS |
| CAAGCATCAGTTGTTCAGCA+CGG | 0.633336 | tig0020543:+47963 | Msa1382930:CDS |
| GTCATCCAGAGAGTTAGTCA+AGG | 0.646355 | tig0020543:+48365 | Msa1382930:CDS |
| TGAGCTAAGGCAATTAGAAG+GGG | 0.649817 | tig0020543:-48027 | None:intergenic |
| ATATCCTGAGAGTATTTGCA+GGG | 0.650780 | tig0020543:+49409 | Msa1382930:CDS |
| AATCCAATGAAGGTAGGCAA+GGG | 0.653423 | tig0020543:-49079 | None:intergenic |
| GAAGTGAAGTCTTTGTTACG+TGG | 0.664790 | tig0020543:+48693 | Msa1382930:CDS |
| TCAACAAGTCTCCAAGTGGG+TGG | 0.665483 | tig0020543:-47173 | None:intergenic |
| AAAGTCAACAAGTCTCCAAG+TGG | 0.666077 | tig0020543:-47177 | None:intergenic |
| AAGTCAACAAGTCTCCAAGT+GGG | 0.688185 | tig0020543:-47176 | None:intergenic |
| GGACTACTATGACTATGAGG+AGG | 0.700817 | tig0020543:-47305 | None:intergenic |
| GACTATGAGGAGGCTCATGG+TGG | 0.712982 | tig0020543:-47295 | None:intergenic |
| CATCCTGTTCTTCAAGACGC+CGG | 0.714018 | tig0020543:-48401 | None:intergenic |
| TCTACTAACAAATTACCTAG+GGG | 0.744257 | tig0020543:+49527 | Msa1382930:CDS |
| GTTTGAACAGAAAAGGACTG+CGG | 0.744270 | tig0020543:+49172 | Msa1382930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTAATGACATTTT+TGG | + | tig0020543:47374-47393 | Msa1382930:intron | 10.0% |
| !! | AGAATGAAATAAATTTGAAT+AGG | + | tig0020543:47672-47691 | Msa1382930:intron | 15.0% |
| !!! | TCTTTTTGATTAAATTCTAA+GGG | + | tig0020543:49632-49651 | Msa1382930:exon | 15.0% |
| !! | AAACAGAAATTACCAATTAT+AGG | - | tig0020543:47461-47480 | None:intergenic | 20.0% |
| !! | AGTTCTATATATCAATTAAG+AGG | + | tig0020543:47516-47535 | Msa1382930:intron | 20.0% |
| !! | GTTCTATATATCAATTAAGA+GGG | + | tig0020543:47517-47536 | Msa1382930:intron | 20.0% |
| !! | ATTCTTTAACATCAACATTA+GGG | - | tig0020543:47657-47676 | None:intergenic | 20.0% |
| !! | AGTAAAAGACAATACATTTA+TGG | + | tig0020543:49550-49569 | Msa1382930:CDS | 20.0% |
| !!! | CTCTTTTTGATTAAATTCTA+AGG | + | tig0020543:49631-49650 | Msa1382930:exon | 20.0% |
| !!! | CTTTTTGATTAAATTCTAAG+GGG | + | tig0020543:49633-49652 | Msa1382930:exon | 20.0% |
| !!! | AATCACATTGTAATTTTACA+TGG | + | tig0020543:49705-49724 | Msa1382930:three_prime_UTR | 20.0% |
| !!! | TCAAAATTTCAAGTTGAAGA+TGG | + | tig0020543:47043-47062 | Msa1382930:exon | 25.0% |
| ! | AGAAAAATGTATGGAGAAAA+GGG | + | tig0020543:47073-47092 | Msa1382930:CDS | 25.0% |
| ! | ATTCTTCTGATGAAAAATCA+AGG | - | tig0020543:47605-47624 | None:intergenic | 25.0% |
| ! | CATTCTTTAACATCAACATT+AGG | - | tig0020543:47658-47677 | None:intergenic | 25.0% |
| ! | AAAGGAAGAACACAATTATA+TGG | - | tig0020543:47765-47784 | None:intergenic | 25.0% |
| ! | AAACATTAATTCCTAAAGTC+AGG | + | tig0020543:47811-47830 | Msa1382930:intron | 25.0% |
| !!! | ATATTTTGAATTTCAACTGC+TGG | + | tig0020543:47883-47902 | Msa1382930:intron | 25.0% |
| ! | TAAACTTCTTGAGATTCAAA+TGG | - | tig0020543:48079-48098 | None:intergenic | 25.0% |
| !!! | GAAGCATTAAAATTGATTTG+AGG | + | tig0020543:48177-48196 | Msa1382930:intron | 25.0% |
| !! | AAAAGTGTATGTAAACTAGA+TGG | + | tig0020543:48262-48281 | Msa1382930:intron | 25.0% |
| !! | ACACATTCATCTTTTTATAC+CGG | - | tig0020543:48317-48336 | None:intergenic | 25.0% |
| !!! | TGTGTTATTTTTCGTAAAAC+AGG | + | tig0020543:48332-48351 | Msa1382930:intron | 25.0% |
| ! | AGAAAAGAAAATGAATAAGC+AGG | + | tig0020543:48500-48519 | Msa1382930:CDS | 25.0% |
| ! | TCGAAAGAGAAAAAAAAGAA+AGG | + | tig0020543:48730-48749 | Msa1382930:CDS | 25.0% |
| !! | AAAAAAAGAAAGGATCCTTT+TGG | + | tig0020543:48740-48759 | Msa1382930:CDS | 25.0% |
| ! | TTCTATTATGCATAATAGTG+CGG | + | tig0020543:48818-48837 | Msa1382930:CDS | 25.0% |
| ! | AATTTCCTTGACTTCTTTAA+TGG | - | tig0020543:49057-49076 | None:intergenic | 25.0% |
| !! | AATCAAAAAGAGCTTTTACT+AGG | - | tig0020543:49623-49642 | None:intergenic | 25.0% |
| ! | ATGTGATTCTATTCTACAAA+AGG | - | tig0020543:49693-49712 | None:intergenic | 25.0% |
| !! | TGTAATTTTACATGGTTAGA+TGG | + | tig0020543:49713-49732 | Msa1382930:three_prime_UTR | 25.0% |
| GGAAAGAAGAGAAAAATGTA+TGG | + | tig0020543:47064-47083 | Msa1382930:CDS | 30.0% | |
| GAGAAAAATGTATGGAGAAA+AGG | + | tig0020543:47072-47091 | Msa1382930:CDS | 30.0% | |
| !! | TACAAAACAAGAAAAGTACC+TGG | - | tig0020543:47337-47356 | None:intergenic | 30.0% |
| ! | TGTTTTCAGATGCCTATAAT+TGG | + | tig0020543:47446-47465 | Msa1382930:intron | 30.0% |
| !! | TCTGTTTCAGCTTTAAAAGT+TGG | + | tig0020543:47474-47493 | Msa1382930:intron | 30.0% |
| TAGGGATAGTTAATTCGAAA+AGG | - | tig0020543:47639-47658 | None:intergenic | 30.0% | |
| GAACACAATTATATGGACAT+TGG | - | tig0020543:47758-47777 | None:intergenic | 30.0% | |
| AGTCTTTCAGCTATCAATAA+AGG | - | tig0020543:47783-47802 | None:intergenic | 30.0% | |
| TCAAACATAATCCTGACTTT+AGG | - | tig0020543:47825-47844 | None:intergenic | 30.0% | |
| TTCATTAAAAATGCCTCAGA+AGG | - | tig0020543:48235-48254 | None:intergenic | 30.0% | |
| !! | TCTGAGGCATTTTTAATGAA+TGG | + | tig0020543:48235-48254 | Msa1382930:intron | 30.0% |
| ! | TCTTTTTATACCGGATGAAA+GGG | - | tig0020543:48308-48327 | None:intergenic | 30.0% |
| ! | ATCTTTTTATACCGGATGAA+AGG | - | tig0020543:48309-48328 | None:intergenic | 30.0% |
| GAAAATGAATAAGCAGGAAA+TGG | + | tig0020543:48506-48525 | Msa1382930:CDS | 30.0% | |
| TTCATAATCTCTTACTCCTT+TGG | - | tig0020543:48787-48806 | None:intergenic | 30.0% | |
| ATTGGATTCCTTTCAACTAA+AGG | + | tig0020543:49094-49113 | Msa1382930:CDS | 30.0% | |
| TATTGTCTCCTTTAGTTGAA+AGG | - | tig0020543:49105-49124 | None:intergenic | 30.0% | |
| !!! | GTTTTTTTCGACTGTTTAAC+AGG | - | tig0020543:49476-49495 | None:intergenic | 30.0% |
| AGTCTACTAACAAATTACCT+AGG | + | tig0020543:49525-49544 | Msa1382930:CDS | 30.0% | |
| GTCTACTAACAAATTACCTA+GGG | + | tig0020543:49526-49545 | Msa1382930:CDS | 30.0% | |
| TCTACTAACAAATTACCTAG+GGG | + | tig0020543:49527-49546 | Msa1382930:CDS | 30.0% | |
| GAAAAGGGAAGAAGGAATAA+TGG | + | tig0020543:47088-47107 | Msa1382930:CDS | 35.0% | |
| ! | GGTGGAAAAGTTGAAACTTT+TGG | + | tig0020543:47109-47128 | Msa1382930:CDS | 35.0% |
| !! | TTGAAACTTTTGGAGAAGAG+AGG | + | tig0020543:47119-47138 | Msa1382930:CDS | 35.0% |
| ! | AACTCTTGTTGATGAGAAGA+AGG | - | tig0020543:47203-47222 | None:intergenic | 35.0% |
| AAATCTCTGTGCTAAACTCT+GGG | + | tig0020543:47259-47278 | Msa1382930:CDS | 35.0% | |
| !! | GCTTTAAAAGTTGGTGACTT+TGG | + | tig0020543:47483-47502 | Msa1382930:intron | 35.0% |
| !! | AAAAGTTGGTGACTTTGGTT+TGG | + | tig0020543:47488-47507 | Msa1382930:intron | 35.0% |
| ATCAGTCGACAGAAATTGTT+CGG | + | tig0020543:47989-48008 | Msa1382930:CDS | 35.0% | |
| TTGAGCTAAGGCAATTAGAA+GGG | - | tig0020543:48031-48050 | None:intergenic | 35.0% | |
| ATTGAGCTAAGGCAATTAGA+AGG | - | tig0020543:48032-48051 | None:intergenic | 35.0% | |
| TTCTAATTGCCTTAGCTCAA+TGG | + | tig0020543:48031-48050 | Msa1382930:CDS | 35.0% | |
| TACTTACTTCCATTGAGCTA+AGG | - | tig0020543:48043-48062 | None:intergenic | 35.0% | |
| ATTTGAGGAAAATCTCCATG+AGG | + | tig0020543:48192-48211 | Msa1382930:intron | 35.0% | |
| TTTGAGGAAAATCTCCATGA+GGG | + | tig0020543:48193-48212 | Msa1382930:intron | 35.0% | |
| ! | GATACTTTTACCCTTTCATC+CGG | + | tig0020543:48295-48314 | Msa1382930:intron | 35.0% |
| ! | AATAGTGAAAGCTCTGATAG+TGG | + | tig0020543:48437-48456 | Msa1382930:CDS | 35.0% |
| ACTAGATCTTTCTCAAACAC+AGG | + | tig0020543:48461-48480 | Msa1382930:CDS | 35.0% | |
| AGGAAGAGATTGAAGATGAA+AGG | + | tig0020543:48616-48635 | Msa1382930:CDS | 35.0% | |
| AAGAGATTGAAGATGAAAGG+AGG | + | tig0020543:48619-48638 | Msa1382930:CDS | 35.0% | |
| CATCACACAAATTCTCCAAA+AGG | - | tig0020543:48758-48777 | None:intergenic | 35.0% | |
| ! | TTGTGTGATGATTTTGCCAA+AGG | + | tig0020543:48768-48787 | Msa1382930:CDS | 35.0% |
| TATGCATAATAGTGCGGATA+AGG | + | tig0020543:48824-48843 | Msa1382930:CDS | 35.0% | |
| ! | TTAATGGTGATAGCCTTGAT+AGG | + | tig0020543:48853-48872 | Msa1382930:CDS | 35.0% |
| ! | TGTGAAGTATTAGCCTATCA+AGG | - | tig0020543:48869-48888 | None:intergenic | 35.0% |
| GCTAATACTTCACATTTCAG+AGG | + | tig0020543:48875-48894 | Msa1382930:CDS | 35.0% | |
| CAAATGAAGCAAGTTCAAGA+TGG | + | tig0020543:48918-48937 | Msa1382930:CDS | 35.0% | |
| AAGCAAGTTCAAGATGGTAT+TGG | + | tig0020543:48924-48943 | Msa1382930:CDS | 35.0% | |
| CAACTATTGAATGTGTCTCT+AGG | - | tig0020543:48959-48978 | None:intergenic | 35.0% | |
| TCCTTGACTTCTTTAATGGA+GGG | - | tig0020543:49053-49072 | None:intergenic | 35.0% | |
| TTCCTTGACTTCTTTAATGG+AGG | - | tig0020543:49054-49073 | None:intergenic | 35.0% | |
| AGTTGAAAGGAATCCAATGA+AGG | - | tig0020543:49092-49111 | None:intergenic | 35.0% | |
| !! | TTCAAACTTGTTGGTACCAA+CGG | - | tig0020543:49159-49178 | None:intergenic | 35.0% |
| ! | CCTTTTCTGTTCAAACTTGT+TGG | - | tig0020543:49168-49187 | None:intergenic | 35.0% |
| CCAACAAGTTTGAACAGAAA+AGG | + | tig0020543:49165-49184 | Msa1382930:CDS | 35.0% | |
| ! | ACTTAACAAGTGCTTTGTTG+AGG | + | tig0020543:49202-49221 | Msa1382930:CDS | 35.0% |
| ! | CTTAACAAGTGCTTTGTTGA+GGG | + | tig0020543:49203-49222 | Msa1382930:CDS | 35.0% |
| ! | TTAACAAGTGCTTTGTTGAG+GGG | + | tig0020543:49204-49223 | Msa1382930:CDS | 35.0% |
| GGAAATCAAGTGAAATTGGA+AGG | + | tig0020543:49225-49244 | Msa1382930:CDS | 35.0% | |
| ! | TCACACAAAGTTGATTCTCT+AGG | - | tig0020543:49275-49294 | None:intergenic | 35.0% |
| !!! | ATTTTCTGGTGGACTTTGTA+CGG | - | tig0020543:49300-49319 | None:intergenic | 35.0% |
| AAAGTCCACCAGAAAATGAT+AGG | + | tig0020543:49303-49322 | Msa1382930:CDS | 35.0% | |
| GTGACATGAATTAATTCCCT+TGG | - | tig0020543:49336-49355 | None:intergenic | 35.0% | |
| TGTTTCCAACTAACTGTTCA+AGG | - | tig0020543:49361-49380 | None:intergenic | 35.0% | |
| AACAGTTCTTTGTCATCAGA+AGG | + | tig0020543:49377-49396 | Msa1382930:CDS | 35.0% | |
| TTTGTCATCAGAAGGTGATA+AGG | + | tig0020543:49385-49404 | Msa1382930:CDS | 35.0% | |
| !! | TATATCCTGAGAGTATTTGC+AGG | + | tig0020543:49408-49427 | Msa1382930:CDS | 35.0% |
| !! | ATATCCTGAGAGTATTTGCA+GGG | + | tig0020543:49409-49428 | Msa1382930:CDS | 35.0% |
| CATTCTGCAGTTACAGTTAA+GGG | + | tig0020543:49446-49465 | Msa1382930:CDS | 35.0% | |
| AGACTGAGACATGTTGAAAT+CGG | - | tig0020543:49510-49529 | None:intergenic | 35.0% | |
| TGTATGGAGAAAAGGGAAGA+AGG | + | tig0020543:47080-47099 | Msa1382930:CDS | 40.0% | |
| AAGGGAAGAAGGAATAATGG+TGG | + | tig0020543:47091-47110 | Msa1382930:CDS | 40.0% | |
| !! | AAACTTTTGGAGAAGAGAGG+AGG | + | tig0020543:47122-47141 | Msa1382930:CDS | 40.0% |
| AAGTCAACAAGTCTCCAAGT+GGG | - | tig0020543:47179-47198 | None:intergenic | 40.0% | |
| AAAGTCAACAAGTCTCCAAG+TGG | - | tig0020543:47180-47199 | None:intergenic | 40.0% | |
| !!! | GCAGAGAGTGTTTTTGAAGT+GGG | - | tig0020543:47236-47255 | None:intergenic | 40.0% |
| !!! | TGCAGAGAGTGTTTTTGAAG+TGG | - | tig0020543:47237-47256 | None:intergenic | 40.0% |
| GAAATCTCTGTGCTAAACTC+TGG | + | tig0020543:47258-47277 | Msa1382930:CDS | 40.0% | |
| !! | AAGAAAAGTACCTGGTGAGA+GGG | - | tig0020543:47329-47348 | None:intergenic | 40.0% |
| TGAGCTAAGGCAATTAGAAG+GGG | - | tig0020543:48030-48049 | None:intergenic | 40.0% | |
| AGCTGTAGTTCAATCAGTCA+AGG | + | tig0020543:48596-48615 | Msa1382930:CDS | 40.0% | |
| GAAGTGAAGTCTTTGTTACG+TGG | + | tig0020543:48693-48712 | Msa1382930:CDS | 40.0% | |
| TACTTCACATTTCAGAGGCT+TGG | + | tig0020543:48880-48899 | Msa1382930:CDS | 40.0% | |
| CCTTGACTTCTTTAATGGAG+GGG | - | tig0020543:49052-49071 | None:intergenic | 40.0% | |
| AATCCAATGAAGGTAGGCAA+GGG | - | tig0020543:49082-49101 | None:intergenic | 40.0% | |
| GAAAGGAATCCAATGAAGGT+AGG | - | tig0020543:49088-49107 | None:intergenic | 40.0% | |
| ! | TTCACCTCATAATTTTGCCG+AGG | + | tig0020543:49127-49146 | Msa1382930:CDS | 40.0% |
| GTTTGAACAGAAAAGGACTG+CGG | + | tig0020543:49172-49191 | Msa1382930:CDS | 40.0% | |
| GAGGGGAAATCAAGTGAAAT+TGG | + | tig0020543:49221-49240 | Msa1382930:CDS | 40.0% | |
| CCTTAACTGTAACTGCAGAA+TGG | - | tig0020543:49448-49467 | None:intergenic | 40.0% | |
| CCATTCTGCAGTTACAGTTA+AGG | + | tig0020543:49445-49464 | Msa1382930:CDS | 40.0% | |
| GACTGAGACATGTTGAAATC+GGG | - | tig0020543:49509-49528 | None:intergenic | 40.0% | |
| ! | GTATTGTCTTTTACTCCCCT+AGG | - | tig0020543:49545-49564 | None:intergenic | 40.0% |
| TATGACTATGAGGAGGCTCA+TGG | - | tig0020543:47301-47320 | None:intergenic | 45.0% | |
| GGACTACTATGACTATGAGG+AGG | - | tig0020543:47308-47327 | None:intergenic | 45.0% | |
| GAGGGACTACTATGACTATG+AGG | - | tig0020543:47311-47330 | None:intergenic | 45.0% | |
| !! | CAAGAAAAGTACCTGGTGAG+AGG | - | tig0020543:47330-47349 | None:intergenic | 45.0% |
| GTACGTCAGCTCTCTTCATA+AGG | - | tig0020543:47725-47744 | None:intergenic | 45.0% | |
| CAAGCATCAGTTGTTCAGCA+CGG | + | tig0020543:47963-47982 | Msa1382930:CDS | 45.0% | |
| CATCGACGATAAATCCCTCA+TGG | - | tig0020543:48210-48229 | None:intergenic | 45.0% | |
| TATCGTCGATGATCCTTCTG+AGG | + | tig0020543:48219-48238 | Msa1382930:intron | 45.0% | |
| GTCATCCAGAGAGTTAGTCA+AGG | + | tig0020543:48365-48384 | Msa1382930:CDS | 45.0% | |
| GAGAACCTTGACTAACTCTC+TGG | - | tig0020543:48373-48392 | None:intergenic | 45.0% | |
| TCAAGGTTCTCAAACGTAGC+CGG | + | tig0020543:48382-48401 | Msa1382930:CDS | 45.0% | |
| AGAAAGCCTGTATCAGAAGC+TGG | + | tig0020543:48656-48675 | Msa1382930:CDS | 45.0% | |
| GCGGATAAGGATCGCATTAA+TGG | + | tig0020543:48837-48856 | Msa1382930:CDS | 45.0% | |
| CCCCTCCATTAAAGAAGTCA+AGG | + | tig0020543:49049-49068 | Msa1382930:CDS | 45.0% | |
| GAATCCAATGAAGGTAGGCA+AGG | - | tig0020543:49083-49102 | None:intergenic | 45.0% | |
| GCTTCCTCGGCAAAATTATG+AGG | - | tig0020543:49134-49153 | None:intergenic | 45.0% | |
| ! | CTGCACCTATCATTTTCTGG+TGG | - | tig0020543:49311-49330 | None:intergenic | 45.0% |
| CACCAGAAAATGATAGGTGC+AGG | + | tig0020543:49309-49328 | Msa1382930:CDS | 45.0% | |
| ! | GTCCTGCACCTATCATTTTC+TGG | - | tig0020543:49314-49333 | None:intergenic | 45.0% |
| AAATGATAGGTGCAGGACCA+AGG | + | tig0020543:49316-49335 | Msa1382930:CDS | 45.0% | |
| AATGATAGGTGCAGGACCAA+GGG | + | tig0020543:49317-49336 | Msa1382930:CDS | 45.0% | |
| CACAGCCTTGAACAGTTAGT+TGG | + | tig0020543:49353-49372 | Msa1382930:CDS | 45.0% | |
| TCTTCCCTGCAAATACTCTC+AGG | - | tig0020543:49416-49435 | None:intergenic | 45.0% | |
| TGGCAAAACTGCTTGAAGCA+AGG | + | tig0020543:49570-49589 | Msa1382930:CDS | 45.0% | |
| ACTGCTTGAAGCAAGGTTAG+AGG | + | tig0020543:49577-49596 | Msa1382930:CDS | 45.0% | |
| !! | AAAAAAAAATTAATTGAAAA+TGG | - | tig0020543:47361-47380 | None:intergenic | 5.0% |
| TTGGAGAAGAGAGGAGGAAG+AGG | + | tig0020543:47128-47147 | Msa1382930:CDS | 50.0% | |
| AGAAGAGAGGAGGAAGAGGA+AGG | + | tig0020543:47132-47151 | Msa1382930:CDS | 50.0% | |
| TCAACAAGTCTCCAAGTGGG+TGG | - | tig0020543:47176-47195 | None:intergenic | 50.0% | |
| TCATAGTAGTCCCTCTCACC+AGG | + | tig0020543:47316-47335 | Msa1382930:CDS | 50.0% | |
| ! | AGCAGATGCTGGCTGTATTG+CGG | - | tig0020543:47922-47941 | None:intergenic | 50.0% |
| CATCCTGTTCTTCAAGACGC+CGG | - | tig0020543:48404-48423 | None:intergenic | 50.0% | |
| CACTAGCCAGCTTCTGATAC+AGG | - | tig0020543:48665-48684 | None:intergenic | 50.0% | |
| TCACCCTTGCCTACCTTCAT+TGG | + | tig0020543:49076-49095 | Msa1382930:CDS | 50.0% | |
| GTTCAACACCACCACCCACT+TGG | + | tig0020543:47162-47181 | Msa1382930:CDS | 55.0% | |
| ACAAGTCTCCAAGTGGGTGG+TGG | - | tig0020543:47173-47192 | None:intergenic | 55.0% | |
| ATGAGGAGGCTCATGGTGGT+GGG | - | tig0020543:47294-47313 | None:intergenic | 55.0% | |
| TATGAGGAGGCTCATGGTGG+TGG | - | tig0020543:47295-47314 | None:intergenic | 55.0% | |
| GACTATGAGGAGGCTCATGG+TGG | - | tig0020543:47298-47317 | None:intergenic | 55.0% | |
| CTCGAGTCTCTAGCAGATGC+TGG | - | tig0020543:47933-47952 | None:intergenic | 55.0% | |
| TAGCCGGCGTCTTGAAGAAC+AGG | + | tig0020543:48398-48417 | Msa1382930:CDS | 55.0% | |
| TTTGCCGAGGAAGCTTCCGT+TGG | + | tig0020543:49140-49159 | Msa1382930:CDS | 55.0% | |
| GGTACCAACGGAAGCTTCCT+CGG | - | tig0020543:49147-49166 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020543 | gene | 46983 | 49748 | 46983 | ID=Msa1382930;Name=Msa1382930 |
| tig0020543 | mRNA | 46983 | 49748 | 46983 | ID=Msa1382930-mRNA-1;Parent=Msa1382930;Name=Msa1382930-mRNA-1;_AED=0.19;_eAED=0.19;_QI=79|1|1|1|1|1|3|108|562 |
| tig0020543 | exon | 46983 | 47337 | 46983 | ID=Msa1382930-mRNA-1:exon:8350;Parent=Msa1382930-mRNA-1 |
| tig0020543 | exon | 47930 | 48055 | 47930 | ID=Msa1382930-mRNA-1:exon:8351;Parent=Msa1382930-mRNA-1 |
| tig0020543 | exon | 48354 | 49748 | 48354 | ID=Msa1382930-mRNA-1:exon:8352;Parent=Msa1382930-mRNA-1 |
| tig0020543 | five_prime_UTR | 46983 | 47061 | 46983 | ID=Msa1382930-mRNA-1:five_prime_utr;Parent=Msa1382930-mRNA-1 |
| tig0020543 | CDS | 47062 | 47337 | 47062 | ID=Msa1382930-mRNA-1:cds;Parent=Msa1382930-mRNA-1 |
| tig0020543 | CDS | 47930 | 48055 | 47930 | ID=Msa1382930-mRNA-1:cds;Parent=Msa1382930-mRNA-1 |
| tig0020543 | CDS | 48354 | 49640 | 48354 | ID=Msa1382930-mRNA-1:cds;Parent=Msa1382930-mRNA-1 |
| tig0020543 | three_prime_UTR | 49641 | 49748 | 49641 | ID=Msa1382930-mRNA-1:three_prime_utr;Parent=Msa1382930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
