Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224500 | XP_039689562.1 | 95.722 | 561 | 24 | 0 | 1 | 561 | 1 | 561 | 0.0 | 1001 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224500 | sp|Q9FWW5|Y1215_ARATH | 46.858 | 557 | 258 | 9 | 5 | 545 | 11 | 545 | 2.43e-123 | 376 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037880 | Msa1224500 | 0.803073 | 4.148070e-49 | -8.615850e-47 |
| Msa0108560 | Msa1224500 | 0.807396 | 5.158575e-50 | -8.615850e-47 |
| Msa0610590 | Msa1224500 | 0.800486 | 1.408818e-48 | -8.615850e-47 |
| Msa0688670 | Msa1224500 | 0.811417 | 7.073109e-51 | -8.615850e-47 |
| Msa0708860 | Msa1224500 | 0.800468 | 1.420949e-48 | -8.615850e-47 |
| Msa0731180 | Msa1224500 | 0.814995 | 1.159757e-51 | -8.615850e-47 |
| Msa0767080 | Msa1224500 | 0.810049 | 1.398171e-50 | -8.615850e-47 |
| Msa0771720 | Msa1224500 | 0.817210 | 3.711344e-52 | -8.615850e-47 |
| Msa0790510 | Msa1224500 | 0.817626 | 2.991219e-52 | -8.615850e-47 |
| Msa0795080 | Msa1224500 | 0.804235 | 2.380918e-49 | -8.615850e-47 |
| Msa0831590 | Msa1224500 | 0.801439 | 8.998136e-49 | -8.615850e-47 |
| Msa0122590 | Msa1224500 | 0.801001 | 1.106461e-48 | -8.615850e-47 |
| Msa0188830 | Msa1224500 | 0.806312 | 8.743312e-50 | -8.615850e-47 |
| Msa0206010 | Msa1224500 | 0.802537 | 5.352136e-49 | -8.615850e-47 |
| Msa0233300 | Msa1224500 | 0.801356 | 9.358937e-49 | -8.615850e-47 |
| Msa0379640 | Msa1224500 | 0.823795 | 1.142628e-53 | -8.615850e-47 |
| Msa0428930 | Msa1224500 | 0.808388 | 3.173535e-50 | -8.615850e-47 |
| Msa0477130 | Msa1224500 | -0.804961 | 1.679790e-49 | -8.615850e-47 |
| Msa1002480 | Msa1224500 | 0.830147 | 3.459000e-55 | -8.615850e-47 |
| Msa1015790 | Msa1224500 | 0.804324 | 2.281996e-49 | -8.615850e-47 |
| Msa1082500 | Msa1224500 | 0.809901 | 1.504367e-50 | -8.615850e-47 |
| Msa1090260 | Msa1224500 | 0.808790 | 2.604584e-50 | -8.615850e-47 |
| Msa0269450 | Msa1224500 | 0.802309 | 5.964767e-49 | -8.615850e-47 |
| Msa0270100 | Msa1224500 | 0.810504 | 1.115529e-50 | -8.615850e-47 |
| Msa0282250 | Msa1224500 | 0.808372 | 3.198843e-50 | -8.615850e-47 |
| Msa0288100 | Msa1224500 | 0.806285 | 8.861664e-50 | -8.615850e-47 |
| Msa0319170 | Msa1224500 | 0.800564 | 1.358603e-48 | -8.615850e-47 |
| Msa0326110 | Msa1224500 | 0.802102 | 6.577105e-49 | -8.615850e-47 |
| Msa1130110 | Msa1224500 | 0.808354 | 3.227323e-50 | -8.615850e-47 |
| Msa1172670 | Msa1224500 | 0.804580 | 2.018228e-49 | -8.615850e-47 |
| Msa1174040 | Msa1224500 | 0.800112 | 1.679242e-48 | -8.615850e-47 |
| Msa1224500 | Msa1233500 | 0.803777 | 2.964222e-49 | -8.615850e-47 |
| Msa1224500 | Msa1233890 | 0.801228 | 9.942986e-49 | -8.615850e-47 |
| Msa1224500 | Msa1276440 | 0.811233 | 7.757167e-51 | -8.615850e-47 |
| Msa1224500 | Msa1279210 | 0.800296 | 1.540525e-48 | -8.615850e-47 |
| Msa1224500 | Msa1306750 | 0.806996 | 6.269778e-50 | -8.615850e-47 |
| Msa1224500 | Msa1328700 | 0.806201 | 9.226760e-50 | -8.615850e-47 |
| Msa1224500 | Msa1333710 | 0.969291 | 6.594131e-130 | -8.615850e-47 |
| Msa1224500 | Msa1333810 | 0.973088 | 7.716539e-136 | -8.615850e-47 |
| Msa1224500 | Msa1340650 | 0.805333 | 1.404074e-49 | -8.615850e-47 |
| Msa1224500 | Msa1382930 | 0.823079 | 1.680381e-53 | -8.615850e-47 |
| Msa1224500 | Msa1392260 | 0.818378 | 2.022657e-52 | -8.615850e-47 |
| Msa1224500 | Msa1393040 | 0.823356 | 1.447212e-53 | -8.615850e-47 |
| Msa1224500 | Msa1397120 | 0.806329 | 8.672925e-50 | -8.615850e-47 |
| Msa1224500 | Msa1438910 | 0.814028 | 1.897639e-51 | -8.615850e-47 |
| Msa1224500 | Msa1445030 | 0.818614 | 1.787981e-52 | -8.615850e-47 |
| Msa1224500 | Msa1451620 | -0.828197 | 1.027874e-54 | -8.615850e-47 |
| Msa1224500 | Msa1464940 | 0.804681 | 1.921960e-49 | -8.615850e-47 |
| Msa0484780 | Msa1224500 | 0.820012 | 8.588998e-53 | -8.615850e-47 |
| Msa0575470 | Msa1224500 | 0.806968 | 6.358100e-50 | -8.615850e-47 |
| Msa0578970 | Msa1224500 | 0.800155 | 1.645710e-48 | -8.615850e-47 |
| Msa0599890 | Msa1224500 | 0.802568 | 5.274458e-49 | -8.615850e-47 |
| Msa0877410 | Msa1224500 | 0.805648 | 1.206248e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224500 | MtrunA17_Chr4g0076431 | 95.722 | 561 | 24 | 0 | 1 | 561 | 1 | 561 | 0.0 | 1001 |
| Msa1224500 | MtrunA17_Chr2g0290651 | 58.947 | 570 | 217 | 6 | 2 | 557 | 11 | 577 | 0.0 | 552 |
| Msa1224500 | MtrunA17_Chr4g0075951 | 94.393 | 321 | 18 | 0 | 241 | 561 | 5 | 325 | 0.0 | 538 |
| Msa1224500 | MtrunA17_Chr3g0102681 | 44.902 | 559 | 279 | 10 | 6 | 541 | 14 | 566 | 3.34e-97 | 309 |
| Msa1224500 | MtrunA17_Chr5g0446731 | 38.624 | 567 | 311 | 10 | 6 | 543 | 15 | 573 | 7.00e-77 | 256 |
| Msa1224500 | MtrunA17_Chr3g0078801 | 39.115 | 565 | 301 | 9 | 11 | 543 | 20 | 573 | 1.75e-75 | 252 |
| Msa1224500 | MtrunA17_Chr1g0153431 | 26.510 | 596 | 355 | 18 | 5 | 540 | 259 | 831 | 1.10e-13 | 74.3 |
| Msa1224500 | MtrunA17_Chr3g0133891 | 26.923 | 598 | 350 | 21 | 1 | 540 | 281 | 849 | 4.92e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1224500 | AT1G12150.2 | 46.858 | 557 | 258 | 9 | 5 | 545 | 11 | 545 | 2.47e-124 | 376 |
| Msa1224500 | AT1G12150.1 | 46.858 | 557 | 258 | 9 | 5 | 545 | 11 | 545 | 2.47e-124 | 376 |
| Msa1224500 | AT5G55860.1 | 40.925 | 562 | 299 | 9 | 6 | 543 | 14 | 566 | 5.85e-79 | 261 |
| Msa1224500 | AT4G17210.1 | 32.675 | 557 | 308 | 9 | 7 | 543 | 17 | 526 | 3.32e-61 | 211 |
| Msa1224500 | AT2G26570.1 | 27.863 | 585 | 358 | 19 | 2 | 540 | 156 | 722 | 5.94e-20 | 94.4 |
| Msa1224500 | AT2G26570.2 | 27.863 | 585 | 358 | 19 | 2 | 540 | 156 | 722 | 5.94e-20 | 94.4 |
| Msa1224500 | AT4G33390.1 | 27.119 | 590 | 338 | 17 | 14 | 541 | 156 | 715 | 3.81e-12 | 69.7 |
Find 94 sgRNAs with CRISPR-Local
Find 274 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATCATATTCATTCTTTA+AGG | 0.132312 | 8_1:-89475965 | None:intergenic |
| TTGTTTCCTCAACAGCTTTC+AGG | 0.144522 | 8_1:-89476755 | None:intergenic |
| CAAGTTTCGCGTCTAGATTT+TGG | 0.198421 | 8_1:-89475999 | None:intergenic |
| AAAGCTGCTGTTAGTTTATT+TGG | 0.205244 | 8_1:+89474936 | Msa1224500:CDS |
| GATAATCTTCATCTCTTTAA+TGG | 0.206604 | 8_1:-89476538 | None:intergenic |
| AGCCTTTCTGCTCATCTCTT+TGG | 0.236137 | 8_1:-89476403 | None:intergenic |
| CTCAATCTCTGCACTTGTTT+CGG | 0.295156 | 8_1:-89476022 | None:intergenic |
| GGCTGAAGCTGTGAGGAATA+AGG | 0.309488 | 8_1:+89475579 | Msa1224500:CDS |
| ACCCTATCCCTAAAAGTTAT+AGG | 0.313601 | 8_1:+89475619 | Msa1224500:CDS |
| CGGCAATTGAACGTGAATTA+AGG | 0.320877 | 8_1:+89476832 | Msa1224500:CDS |
| CTGTCTCCGATTGTAGCTTC+TGG | 0.322489 | 8_1:-89476362 | None:intergenic |
| CGCTTTGATTGCTGATTCCT+TGG | 0.325341 | 8_1:-89475557 | None:intergenic |
| GAGAAAATACTAGCTTCTTA+AGG | 0.329746 | 8_1:-89476164 | None:intergenic |
| CTGCTTCTTCAGCCGCTGCT+CGG | 0.339770 | 8_1:-89476455 | None:intergenic |
| AACATCCTGCAGTGTCTTTG+TGG | 0.340359 | 8_1:-89476124 | None:intergenic |
| CTCTCGATTTCAAAATTTAG+TGG | 0.349735 | 8_1:+89476579 | Msa1224500:CDS |
| GGCAAAGCTAGCAGCACTGC+AGG | 0.355322 | 8_1:+89475765 | Msa1224500:CDS |
| GTGCTCTATCGATGCTTTCA+TGG | 0.374865 | 8_1:-89475860 | None:intergenic |
| TAACAGCAGCTTTGACAGAT+TGG | 0.377262 | 8_1:-89474926 | None:intergenic |
| TTCTCTCACATTGTTCAGCT+TGG | 0.378811 | 8_1:-89475533 | None:intergenic |
| AGCAAGAACTCACGAAAATC+AGG | 0.398382 | 8_1:+89475719 | Msa1224500:CDS |
| AGAAAATACTAGCTTCTTAA+GGG | 0.410056 | 8_1:-89476163 | None:intergenic |
| TGCTTCTTCAGCCGCTGCTC+GGG | 0.410829 | 8_1:-89476454 | None:intergenic |
| CTAGCAGCACTGCAGGCAAC+AGG | 0.421103 | 8_1:+89475772 | Msa1224500:CDS |
| CAAACTCTCAAGGGTCTCCT+TGG | 0.423083 | 8_1:-89475506 | None:intergenic |
| ATCGGTGAAGATGTACTATC+AGG | 0.427441 | 8_1:-89476867 | None:intergenic |
| AGTGAAGGAATACCAAGAAT+TGG | 0.430131 | 8_1:+89476647 | Msa1224500:CDS |
| GCTGAAGCTGTGAGGAATAA+GGG | 0.430229 | 8_1:+89475580 | Msa1224500:CDS |
| CAAAATTTAGTGGTAAGATC+AGG | 0.437222 | 8_1:+89476589 | Msa1224500:CDS |
| TTATCTGAACAATCTGATAT+CGG | 0.442943 | 8_1:-89476885 | None:intergenic |
| GGAAAGTGCTTTAACTTTCG+TGG | 0.447771 | 8_1:-89475470 | None:intergenic |
| CTGCAAAATTTAACTCAGAA+AGG | 0.449552 | 8_1:+89475809 | Msa1224500:CDS |
| AAAGAAAGAGGCAGCTATCA+TGG | 0.460393 | 8_1:+89476674 | Msa1224500:CDS |
| CGAAACAAGTGCAGAGATTG+AGG | 0.462554 | 8_1:+89476023 | Msa1224500:CDS |
| TTGCTTGGAAGAATCTAGTT+CGG | 0.465635 | 8_1:-89475701 | None:intergenic |
| CTGCAATGGAGACGGCTTTG+TGG | 0.473961 | 8_1:+89476781 | Msa1224500:CDS |
| GAAGAGGCGGGGCCTCAGCC+AGG | 0.487515 | 8_1:+89476297 | Msa1224500:CDS |
| ATCTCTCCAACCTCTCCCCT+TGG | 0.489793 | 8_1:-89474885 | None:intergenic |
| AAAGCTTCATGCTTCCAAGA+TGG | 0.490345 | 8_1:+89476065 | Msa1224500:CDS |
| AGAGATGAGCAGAAAGGCTC+AGG | 0.494120 | 8_1:+89476407 | Msa1224500:CDS |
| GGCTTTGTGGTATGCAGAGA+TGG | 0.496437 | 8_1:+89476794 | Msa1224500:CDS |
| GCATCCACGGTACCTGGCTG+AGG | 0.500220 | 8_1:-89476309 | None:intergenic |
| GATTCTCCAAGGGGAGAGGT+TGG | 0.507507 | 8_1:+89474879 | Msa1224500:CDS |
| GAAGAGTTTGAGTCACTGAA+TGG | 0.508477 | 8_1:+89476621 | Msa1224500:CDS |
| GCTTGGTTGTCAAACTCTCA+AGG | 0.509583 | 8_1:-89475516 | None:intergenic |
| TCTGCAGAATGTATTTGAAA+AGG | 0.511045 | 8_1:+89475381 | Msa1224500:intron |
| AAGTTTCACAGAATCCATCT+TGG | 0.515653 | 8_1:-89476079 | None:intergenic |
| TTGACAGCGAATCTGTCCTT+AGG | 0.517593 | 8_1:-89474972 | None:intergenic |
| ACATTGGCATCCACGGTACC+TGG | 0.522638 | 8_1:-89476315 | None:intergenic |
| AAAGGAGACACAGCTTATCC+TGG | 0.526439 | 8_1:+89475399 | Msa1224500:CDS |
| TGAGGAAACAAAGGCTGCAA+TGG | 0.535827 | 8_1:+89476767 | Msa1224500:CDS |
| TAAAATCCAGAAGCTACAAT+CGG | 0.536535 | 8_1:+89476356 | Msa1224500:CDS |
| TGGTGAAGTAGCAGTTCCTA+AGG | 0.542024 | 8_1:+89474956 | Msa1224500:CDS |
| AGCTAACCTGAAAGCTGTTG+AGG | 0.545144 | 8_1:+89476749 | Msa1224500:CDS |
| CTCCTTGGCCTTCTCAAGGT+CGG | 0.546026 | 8_1:-89475491 | None:intergenic |
| AAGTTATAGGATATGAAGCT+TGG | 0.546034 | 8_1:+89475632 | Msa1224500:CDS |
| GGGTCTCCTTGGCCTTCTCA+AGG | 0.547497 | 8_1:-89475495 | None:intergenic |
| GAGCAAAGATATGAGAAAGG+TGG | 0.550127 | 8_1:+89474857 | None:intergenic |
| TTAGAGCAAAGATATGAGAA+AGG | 0.552619 | 8_1:+89474854 | None:intergenic |
| GAAAGAGCAAGATGAGCTGA+AGG | 0.554843 | 8_1:+89476212 | Msa1224500:CDS |
| AGCTGAAGCATCCCGAGCAG+CGG | 0.556164 | 8_1:+89476443 | Msa1224500:CDS |
| AACAAAGGCTGCAATGGAGA+CGG | 0.559947 | 8_1:+89476773 | Msa1224500:CDS |
| GGTGGATTCTCCAAGGGGAG+AGG | 0.568728 | 8_1:+89474875 | Msa1224500:CDS |
| AAAAGAGCGCGGAAGAGGCG+GGG | 0.571475 | 8_1:+89476286 | Msa1224500:CDS |
| AAGAAACGAGTACACGACTA+AGG | 0.572909 | 8_1:+89475675 | Msa1224500:CDS |
| AGCCAAAGAGATGAGCAGAA+AGG | 0.575074 | 8_1:+89476401 | Msa1224500:CDS |
| GAACAATGTGAGAGAATCCA+AGG | 0.577444 | 8_1:+89475540 | Msa1224500:CDS |
| AGCACTTTCCGACCTTGAGA+AGG | 0.580366 | 8_1:+89475483 | Msa1224500:CDS |
| GTCACTGAATGGAAAAGTGA+AGG | 0.582811 | 8_1:+89476632 | Msa1224500:CDS |
| GATCTTGCTTCTAACCTCAC+TGG | 0.583636 | 8_1:+89476255 | Msa1224500:CDS |
| CTTGGTTGTCAAACTCTCAA+GGG | 0.592536 | 8_1:-89475515 | None:intergenic |
| AGAATTGGCAGAAAAGAAAG+AGG | 0.594912 | 8_1:+89476662 | Msa1224500:CDS |
| GTAGAAGACATTGGCATCCA+CGG | 0.595783 | 8_1:-89476322 | None:intergenic |
| TTCCGACCTTGAGAAGGCCA+AGG | 0.596478 | 8_1:+89475489 | Msa1224500:CDS |
| TGAGAAAGGTGGATTCTCCA+AGG | 0.601503 | 8_1:+89474868 | Msa1224500:CDS |
| GAAAGCTGTTGAGGAAACAA+AGG | 0.603568 | 8_1:+89476758 | Msa1224500:CDS |
| GAGAAAGGTGGATTCTCCAA+GGG | 0.604164 | 8_1:+89474869 | Msa1224500:CDS |
| GCTATCATGGCTGAGTTGCA+AGG | 0.607203 | 8_1:+89476687 | Msa1224500:CDS |
| AAATGAATTAGACATAAAGG+TGG | 0.613977 | 8_1:+89476725 | Msa1224500:CDS |
| AGAACTCACGAAAATCAGGC+AGG | 0.613981 | 8_1:+89475723 | Msa1224500:CDS |
| GATGGCAAATTCTGCAAAAG+CGG | 0.615271 | 8_1:+89476812 | Msa1224500:CDS |
| AGAAGCCACAAAGACACTGC+AGG | 0.623758 | 8_1:+89476119 | Msa1224500:CDS |
| GGTTGGAGAGATTGACACAA+GGG | 0.639933 | 8_1:+89474896 | Msa1224500:CDS |
| AAATTTAACTCAGAAAGGAT+CGG | 0.640420 | 8_1:+89475814 | Msa1224500:CDS |
| ACTTTGCATGTAGAAGACAT+TGG | 0.657532 | 8_1:-89476331 | None:intergenic |
| GCAGCTTTGACAGATTGGAA+TGG | 0.664413 | 8_1:-89474921 | None:intergenic |
| AGTTGCAAGGAATGTACACA+AGG | 0.668978 | 8_1:+89476700 | Msa1224500:CDS |
| AGGTTGGAGAGATTGACACA+AGG | 0.675431 | 8_1:+89474895 | Msa1224500:CDS |
| AAGGATCGGTGAACTCTCAG+AGG | 0.679076 | 8_1:+89475828 | Msa1224500:CDS |
| TGTCAAGAGAAGATCGTCAG+AGG | 0.688771 | 8_1:+89474989 | Msa1224500:CDS |
| TCAAAGCGGCTGAAGCTGTG+AGG | 0.688806 | 8_1:+89475572 | Msa1224500:CDS |
| AGAAAGGTGGATTCTCCAAG+GGG | 0.690833 | 8_1:+89474870 | Msa1224500:CDS |
| CGAGAGTCTACTTTGCACGT+CGG | 0.708077 | 8_1:-89476562 | None:intergenic |
| CAAGGAATCAGCAATCAAAG+CGG | 0.736218 | 8_1:+89475558 | Msa1224500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATAATTTATACCATAT+TGG | + | chr8_1:89475025-89475044 | Msa1224500:intron | 10.0% |
| !! | TATAATAATTTATACCATAT+TGG | + | chr8_1:89475025-89475044 | Msa1224500:intron | 10.0% |
| !! | TGTATAAAAAAAATCCAATA+TGG | - | chr8_1:89475042-89475061 | None:intergenic | 15.0% |
| !!! | TTTTATACATATTGTTTCAT+AGG | + | chr8_1:89475053-89475072 | Msa1224500:intron | 15.0% |
| !!! | TAACTTACATAATTCTTTTT+GGG | - | chr8_1:89475425-89475444 | None:intergenic | 15.0% |
| !!! | TTAACTTACATAATTCTTTT+TGG | - | chr8_1:89475426-89475445 | None:intergenic | 15.0% |
| !! | TGTATAAAAAAAATCCAATA+TGG | - | chr8_1:89475042-89475061 | None:intergenic | 15.0% |
| !!! | TTTTATACATATTGTTTCAT+AGG | + | chr8_1:89475053-89475072 | Msa1224500:intron | 15.0% |
| !!! | TAACTTACATAATTCTTTTT+GGG | - | chr8_1:89475425-89475444 | None:intergenic | 15.0% |
| !!! | TTAACTTACATAATTCTTTT+TGG | - | chr8_1:89475426-89475445 | None:intergenic | 15.0% |
| !!! | TTCATATCCTATAACTTTTA+GGG | - | chr8_1:89475629-89475648 | None:intergenic | 20.0% |
| !! | ATCATCATATTCATTCTTTA+AGG | - | chr8_1:89475968-89475987 | None:intergenic | 20.0% |
| !! | GAAAAATGAATTAGACATAA+AGG | + | chr8_1:89476722-89476741 | Msa1224500:CDS | 20.0% |
| !!! | TTCATATCCTATAACTTTTA+GGG | - | chr8_1:89475629-89475648 | None:intergenic | 20.0% |
| !! | ATCATCATATTCATTCTTTA+AGG | - | chr8_1:89475968-89475987 | None:intergenic | 20.0% |
| !! | GAAAAATGAATTAGACATAA+AGG | + | chr8_1:89476722-89476741 | Msa1224500:CDS | 20.0% |
| !! | ATCCTAGACATTTTAAATGT+TGG | + | chr8_1:89475140-89475159 | Msa1224500:intron | 25.0% |
| !! | TTCCAACATTTAAAATGTCT+AGG | - | chr8_1:89475145-89475164 | None:intergenic | 25.0% |
| !! | CTTCATATCCTATAACTTTT+AGG | - | chr8_1:89475630-89475649 | None:intergenic | 25.0% |
| ! | AAATTTAACTCAGAAAGGAT+CGG | + | chr8_1:89475814-89475833 | Msa1224500:CDS | 25.0% |
| !!! | AGTTTTGTAAAAGTCGAATT+GGG | - | chr8_1:89475914-89475933 | None:intergenic | 25.0% |
| !! | AGAAAATACTAGCTTCTTAA+GGG | - | chr8_1:89476166-89476185 | None:intergenic | 25.0% |
| ! | GATAATCTTCATCTCTTTAA+TGG | - | chr8_1:89476541-89476560 | None:intergenic | 25.0% |
| ! | AAATGAATTAGACATAAAGG+TGG | + | chr8_1:89476725-89476744 | Msa1224500:CDS | 25.0% |
| ! | TTATCTGAACAATCTGATAT+CGG | - | chr8_1:89476888-89476907 | None:intergenic | 25.0% |
| !! | ATCCTAGACATTTTAAATGT+TGG | + | chr8_1:89475140-89475159 | Msa1224500:intron | 25.0% |
| !! | TTCCAACATTTAAAATGTCT+AGG | - | chr8_1:89475145-89475164 | None:intergenic | 25.0% |
| !! | CTTCATATCCTATAACTTTT+AGG | - | chr8_1:89475630-89475649 | None:intergenic | 25.0% |
| ! | AAATTTAACTCAGAAAGGAT+CGG | + | chr8_1:89475814-89475833 | Msa1224500:CDS | 25.0% |
| !!! | AGTTTTGTAAAAGTCGAATT+GGG | - | chr8_1:89475914-89475933 | None:intergenic | 25.0% |
| !! | AGAAAATACTAGCTTCTTAA+GGG | - | chr8_1:89476166-89476185 | None:intergenic | 25.0% |
| ! | GATAATCTTCATCTCTTTAA+TGG | - | chr8_1:89476541-89476560 | None:intergenic | 25.0% |
| ! | AAATGAATTAGACATAAAGG+TGG | + | chr8_1:89476725-89476744 | Msa1224500:CDS | 25.0% |
| ! | TTATCTGAACAATCTGATAT+CGG | - | chr8_1:89476888-89476907 | None:intergenic | 25.0% |
| ! | AAAGCTGCTGTTAGTTTATT+TGG | + | chr8_1:89474936-89474955 | Msa1224500:CDS | 30.0% |
| TGACACACAAACAATACAAA+AGG | + | chr8_1:89475232-89475251 | Msa1224500:intron | 30.0% | |
| ! | AAGAAGTGTGAAACTTGTTT+AGG | - | chr8_1:89475355-89475374 | None:intergenic | 30.0% |
| AAACAAGTTTCACACTTCTT+TGG | + | chr8_1:89475355-89475374 | Msa1224500:intron | 30.0% | |
| TCTGCAGAATGTATTTGAAA+AGG | + | chr8_1:89475381-89475400 | Msa1224500:intron | 30.0% | |
| !! | TCCTATAACTTTTAGGGATA+GGG | - | chr8_1:89475623-89475642 | None:intergenic | 30.0% |
| !! | ATCCTATAACTTTTAGGGAT+AGG | - | chr8_1:89475624-89475643 | None:intergenic | 30.0% |
| AAGTTATAGGATATGAAGCT+TGG | + | chr8_1:89475632-89475651 | Msa1224500:CDS | 30.0% | |
| CTGCAAAATTTAACTCAGAA+AGG | + | chr8_1:89475809-89475828 | Msa1224500:CDS | 30.0% | |
| !! | CAGTTTTGTAAAAGTCGAAT+TGG | - | chr8_1:89475915-89475934 | None:intergenic | 30.0% |
| !!! | TCTAGATTTTGGATTAGTTC+TGG | - | chr8_1:89475991-89476010 | None:intergenic | 30.0% |
| ! | GAGAAAATACTAGCTTCTTA+AGG | - | chr8_1:89476167-89476186 | None:intergenic | 30.0% |
| ! | AGAAGCTAGTATTTTCTCTT+AGG | + | chr8_1:89476169-89476188 | Msa1224500:CDS | 30.0% |
| TAAAATCCAGAAGCTACAAT+CGG | + | chr8_1:89476356-89476375 | Msa1224500:CDS | 30.0% | |
| !! | GAAAAAGCTAGAACTTGTTT+TGG | + | chr8_1:89476479-89476498 | Msa1224500:CDS | 30.0% |
| CTCTCGATTTCAAAATTTAG+TGG | + | chr8_1:89476579-89476598 | Msa1224500:CDS | 30.0% | |
| CAAAATTTAGTGGTAAGATC+AGG | + | chr8_1:89476589-89476608 | Msa1224500:CDS | 30.0% | |
| ! | AAAGCTGCTGTTAGTTTATT+TGG | + | chr8_1:89474936-89474955 | Msa1224500:CDS | 30.0% |
| TGACACACAAACAATACAAA+AGG | + | chr8_1:89475232-89475251 | Msa1224500:intron | 30.0% | |
| ! | AAGAAGTGTGAAACTTGTTT+AGG | - | chr8_1:89475355-89475374 | None:intergenic | 30.0% |
| AAACAAGTTTCACACTTCTT+TGG | + | chr8_1:89475355-89475374 | Msa1224500:intron | 30.0% | |
| TCTGCAGAATGTATTTGAAA+AGG | + | chr8_1:89475381-89475400 | Msa1224500:intron | 30.0% | |
| !! | TCCTATAACTTTTAGGGATA+GGG | - | chr8_1:89475623-89475642 | None:intergenic | 30.0% |
| !! | ATCCTATAACTTTTAGGGAT+AGG | - | chr8_1:89475624-89475643 | None:intergenic | 30.0% |
| AAGTTATAGGATATGAAGCT+TGG | + | chr8_1:89475632-89475651 | Msa1224500:CDS | 30.0% | |
| CTGCAAAATTTAACTCAGAA+AGG | + | chr8_1:89475809-89475828 | Msa1224500:CDS | 30.0% | |
| !! | CAGTTTTGTAAAAGTCGAAT+TGG | - | chr8_1:89475915-89475934 | None:intergenic | 30.0% |
| !!! | TCTAGATTTTGGATTAGTTC+TGG | - | chr8_1:89475991-89476010 | None:intergenic | 30.0% |
| ! | GAGAAAATACTAGCTTCTTA+AGG | - | chr8_1:89476167-89476186 | None:intergenic | 30.0% |
| ! | AGAAGCTAGTATTTTCTCTT+AGG | + | chr8_1:89476169-89476188 | Msa1224500:CDS | 30.0% |
| TAAAATCCAGAAGCTACAAT+CGG | + | chr8_1:89476356-89476375 | Msa1224500:CDS | 30.0% | |
| !! | GAAAAAGCTAGAACTTGTTT+TGG | + | chr8_1:89476479-89476498 | Msa1224500:CDS | 30.0% |
| CTCTCGATTTCAAAATTTAG+TGG | + | chr8_1:89476579-89476598 | Msa1224500:CDS | 30.0% | |
| CAAAATTTAGTGGTAAGATC+AGG | + | chr8_1:89476589-89476608 | Msa1224500:CDS | 30.0% | |
| ! | TCAGGTATTGTGTGAAACTT+TGG | - | chr8_1:89475200-89475219 | None:intergenic | 35.0% |
| TTCACACAATACCTGATGTT+AGG | + | chr8_1:89475204-89475223 | Msa1224500:intron | 35.0% | |
| !! | TACATAATTCTTTTTGGGCC+AGG | - | chr8_1:89475420-89475439 | None:intergenic | 35.0% |
| ACCCTATCCCTAAAAGTTAT+AGG | + | chr8_1:89475619-89475638 | Msa1224500:CDS | 35.0% | |
| TTGCTTGGAAGAATCTAGTT+CGG | - | chr8_1:89475704-89475723 | None:intergenic | 35.0% | |
| ! | AGAAGAAGCACAGAAAAAAC+TGG | + | chr8_1:89475939-89475958 | Msa1224500:CDS | 35.0% |
| AAGTTTCACAGAATCCATCT+TGG | - | chr8_1:89476082-89476101 | None:intergenic | 35.0% | |
| !!! | TCTTTTTCAATTCACCAGTG+AGG | - | chr8_1:89476272-89476291 | None:intergenic | 35.0% |
| ACTTTGCATGTAGAAGACAT+TGG | - | chr8_1:89476334-89476353 | None:intergenic | 35.0% | |
| AGTGAAGGAATACCAAGAAT+TGG | + | chr8_1:89476647-89476666 | Msa1224500:CDS | 35.0% | |
| ! | CTTTCTTTTCTGCCAATTCT+TGG | - | chr8_1:89476662-89476681 | None:intergenic | 35.0% |
| AGAATTGGCAGAAAAGAAAG+AGG | + | chr8_1:89476662-89476681 | Msa1224500:CDS | 35.0% | |
| ! | TCAGGTATTGTGTGAAACTT+TGG | - | chr8_1:89475200-89475219 | None:intergenic | 35.0% |
| TTCACACAATACCTGATGTT+AGG | + | chr8_1:89475204-89475223 | Msa1224500:intron | 35.0% | |
| !! | TACATAATTCTTTTTGGGCC+AGG | - | chr8_1:89475420-89475439 | None:intergenic | 35.0% |
| ACCCTATCCCTAAAAGTTAT+AGG | + | chr8_1:89475619-89475638 | Msa1224500:CDS | 35.0% | |
| TTGCTTGGAAGAATCTAGTT+CGG | - | chr8_1:89475704-89475723 | None:intergenic | 35.0% | |
| ! | AGAAGAAGCACAGAAAAAAC+TGG | + | chr8_1:89475939-89475958 | Msa1224500:CDS | 35.0% |
| AAGTTTCACAGAATCCATCT+TGG | - | chr8_1:89476082-89476101 | None:intergenic | 35.0% | |
| !!! | TCTTTTTCAATTCACCAGTG+AGG | - | chr8_1:89476272-89476291 | None:intergenic | 35.0% |
| ACTTTGCATGTAGAAGACAT+TGG | - | chr8_1:89476334-89476353 | None:intergenic | 35.0% | |
| AGTGAAGGAATACCAAGAAT+TGG | + | chr8_1:89476647-89476666 | Msa1224500:CDS | 35.0% | |
| ! | CTTTCTTTTCTGCCAATTCT+TGG | - | chr8_1:89476662-89476681 | None:intergenic | 35.0% |
| AGAATTGGCAGAAAAGAAAG+AGG | + | chr8_1:89476662-89476681 | Msa1224500:CDS | 35.0% | |
| ! | TAACAGCAGCTTTGACAGAT+TGG | - | chr8_1:89474929-89474948 | None:intergenic | 40.0% |
| GTGTCAAATTGCCTAACATC+AGG | - | chr8_1:89475218-89475237 | None:intergenic | 40.0% | |
| ! | AAGTTTTTCCCATGACGAGA+GGG | - | chr8_1:89475258-89475277 | None:intergenic | 40.0% |
| ! | AAAGTTTTTCCCATGACGAG+AGG | - | chr8_1:89475259-89475278 | None:intergenic | 40.0% |
| !! | GGAAAGTGCTTTAACTTTCG+TGG | - | chr8_1:89475473-89475492 | None:intergenic | 40.0% |
| CTTGGTTGTCAAACTCTCAA+GGG | - | chr8_1:89475518-89475537 | None:intergenic | 40.0% | |
| TTCTCTCACATTGTTCAGCT+TGG | - | chr8_1:89475536-89475555 | None:intergenic | 40.0% | |
| GAACAATGTGAGAGAATCCA+AGG | + | chr8_1:89475540-89475559 | Msa1224500:CDS | 40.0% | |
| CAAGGAATCAGCAATCAAAG+CGG | + | chr8_1:89475558-89475577 | Msa1224500:CDS | 40.0% | |
| ! | AGGGATAGGGTCTTTTCAAA+TGG | - | chr8_1:89475610-89475629 | None:intergenic | 40.0% |
| AAGAAACGAGTACACGACTA+AGG | + | chr8_1:89475675-89475694 | Msa1224500:CDS | 40.0% | |
| ! | GATTTTCGTGAGTTCTTGCT+TGG | - | chr8_1:89475719-89475738 | None:intergenic | 40.0% |
| AGCAAGAACTCACGAAAATC+AGG | + | chr8_1:89475719-89475738 | Msa1224500:CDS | 40.0% | |
| !! | GCAGGATTTTGATGCAGTTT+TGG | + | chr8_1:89475741-89475760 | Msa1224500:CDS | 40.0% |
| !! | GGATTTTGATGCAGTTTTGG+AGG | + | chr8_1:89475744-89475763 | Msa1224500:CDS | 40.0% |
| ! | TTGGGTTTCATTTTGTGCAG+AGG | - | chr8_1:89475896-89475915 | None:intergenic | 40.0% |
| ! | AGAAGCACAGAAAAAACTGG+AGG | + | chr8_1:89475942-89475961 | Msa1224500:CDS | 40.0% |
| ! | CAAGTTTCGCGTCTAGATTT+TGG | - | chr8_1:89476002-89476021 | None:intergenic | 40.0% |
| CTCAATCTCTGCACTTGTTT+CGG | - | chr8_1:89476025-89476044 | None:intergenic | 40.0% | |
| AAAGCTTCATGCTTCCAAGA+TGG | + | chr8_1:89476065-89476084 | Msa1224500:CDS | 40.0% | |
| TGGTGAATTGAAAAAGAGCG+CGG | + | chr8_1:89476275-89476294 | Msa1224500:CDS | 40.0% | |
| !!! | GCTAGAACTTGTTTTGGAAG+AGG | + | chr8_1:89476485-89476504 | Msa1224500:CDS | 40.0% |
| !!! | TGTTTTGGAAGAGGCTAAAG+AGG | + | chr8_1:89476494-89476513 | Msa1224500:CDS | 40.0% |
| GGCAAAAACAGCAGAACAAA+AGG | + | chr8_1:89476515-89476534 | Msa1224500:CDS | 40.0% | |
| GAAGAGTTTGAGTCACTGAA+TGG | + | chr8_1:89476621-89476640 | Msa1224500:CDS | 40.0% | |
| GTCACTGAATGGAAAAGTGA+AGG | + | chr8_1:89476632-89476651 | Msa1224500:CDS | 40.0% | |
| AAAGAAAGAGGCAGCTATCA+TGG | + | chr8_1:89476674-89476693 | Msa1224500:CDS | 40.0% | |
| AGTTGCAAGGAATGTACACA+AGG | + | chr8_1:89476700-89476719 | Msa1224500:CDS | 40.0% | |
| TTGTTTCCTCAACAGCTTTC+AGG | - | chr8_1:89476758-89476777 | None:intergenic | 40.0% | |
| GAAAGCTGTTGAGGAAACAA+AGG | + | chr8_1:89476758-89476777 | Msa1224500:CDS | 40.0% | |
| GATGGCAAATTCTGCAAAAG+CGG | + | chr8_1:89476812-89476831 | Msa1224500:CDS | 40.0% | |
| CGGCAATTGAACGTGAATTA+AGG | + | chr8_1:89476832-89476851 | Msa1224500:CDS | 40.0% | |
| ATCGGTGAAGATGTACTATC+AGG | - | chr8_1:89476870-89476889 | None:intergenic | 40.0% | |
| ! | TAACAGCAGCTTTGACAGAT+TGG | - | chr8_1:89474929-89474948 | None:intergenic | 40.0% |
| GTGTCAAATTGCCTAACATC+AGG | - | chr8_1:89475218-89475237 | None:intergenic | 40.0% | |
| ! | AAGTTTTTCCCATGACGAGA+GGG | - | chr8_1:89475258-89475277 | None:intergenic | 40.0% |
| ! | AAAGTTTTTCCCATGACGAG+AGG | - | chr8_1:89475259-89475278 | None:intergenic | 40.0% |
| !! | GGAAAGTGCTTTAACTTTCG+TGG | - | chr8_1:89475473-89475492 | None:intergenic | 40.0% |
| CTTGGTTGTCAAACTCTCAA+GGG | - | chr8_1:89475518-89475537 | None:intergenic | 40.0% | |
| TTCTCTCACATTGTTCAGCT+TGG | - | chr8_1:89475536-89475555 | None:intergenic | 40.0% | |
| GAACAATGTGAGAGAATCCA+AGG | + | chr8_1:89475540-89475559 | Msa1224500:CDS | 40.0% | |
| CAAGGAATCAGCAATCAAAG+CGG | + | chr8_1:89475558-89475577 | Msa1224500:CDS | 40.0% | |
| ! | AGGGATAGGGTCTTTTCAAA+TGG | - | chr8_1:89475610-89475629 | None:intergenic | 40.0% |
| AAGAAACGAGTACACGACTA+AGG | + | chr8_1:89475675-89475694 | Msa1224500:CDS | 40.0% | |
| ! | GATTTTCGTGAGTTCTTGCT+TGG | - | chr8_1:89475719-89475738 | None:intergenic | 40.0% |
| AGCAAGAACTCACGAAAATC+AGG | + | chr8_1:89475719-89475738 | Msa1224500:CDS | 40.0% | |
| !! | GCAGGATTTTGATGCAGTTT+TGG | + | chr8_1:89475741-89475760 | Msa1224500:CDS | 40.0% |
| !! | GGATTTTGATGCAGTTTTGG+AGG | + | chr8_1:89475744-89475763 | Msa1224500:CDS | 40.0% |
| ! | TTGGGTTTCATTTTGTGCAG+AGG | - | chr8_1:89475896-89475915 | None:intergenic | 40.0% |
| ! | AGAAGCACAGAAAAAACTGG+AGG | + | chr8_1:89475942-89475961 | Msa1224500:CDS | 40.0% |
| ! | CAAGTTTCGCGTCTAGATTT+TGG | - | chr8_1:89476002-89476021 | None:intergenic | 40.0% |
| CTCAATCTCTGCACTTGTTT+CGG | - | chr8_1:89476025-89476044 | None:intergenic | 40.0% | |
| AAAGCTTCATGCTTCCAAGA+TGG | + | chr8_1:89476065-89476084 | Msa1224500:CDS | 40.0% | |
| TGGTGAATTGAAAAAGAGCG+CGG | + | chr8_1:89476275-89476294 | Msa1224500:CDS | 40.0% | |
| !!! | GCTAGAACTTGTTTTGGAAG+AGG | + | chr8_1:89476485-89476504 | Msa1224500:CDS | 40.0% |
| !!! | TGTTTTGGAAGAGGCTAAAG+AGG | + | chr8_1:89476494-89476513 | Msa1224500:CDS | 40.0% |
| GGCAAAAACAGCAGAACAAA+AGG | + | chr8_1:89476515-89476534 | Msa1224500:CDS | 40.0% | |
| GAAGAGTTTGAGTCACTGAA+TGG | + | chr8_1:89476621-89476640 | Msa1224500:CDS | 40.0% | |
| GTCACTGAATGGAAAAGTGA+AGG | + | chr8_1:89476632-89476651 | Msa1224500:CDS | 40.0% | |
| AAAGAAAGAGGCAGCTATCA+TGG | + | chr8_1:89476674-89476693 | Msa1224500:CDS | 40.0% | |
| AGTTGCAAGGAATGTACACA+AGG | + | chr8_1:89476700-89476719 | Msa1224500:CDS | 40.0% | |
| TTGTTTCCTCAACAGCTTTC+AGG | - | chr8_1:89476758-89476777 | None:intergenic | 40.0% | |
| GAAAGCTGTTGAGGAAACAA+AGG | + | chr8_1:89476758-89476777 | Msa1224500:CDS | 40.0% | |
| GATGGCAAATTCTGCAAAAG+CGG | + | chr8_1:89476812-89476831 | Msa1224500:CDS | 40.0% | |
| CGGCAATTGAACGTGAATTA+AGG | + | chr8_1:89476832-89476851 | Msa1224500:CDS | 40.0% | |
| ATCGGTGAAGATGTACTATC+AGG | - | chr8_1:89476870-89476889 | None:intergenic | 40.0% | |
| ! | TGAGAAAGGTGGATTCTCCA+AGG | + | chr8_1:89474868-89474887 | Msa1224500:CDS | 45.0% |
| ! | GAGAAAGGTGGATTCTCCAA+GGG | + | chr8_1:89474869-89474888 | Msa1224500:CDS | 45.0% |
| ! | AGAAAGGTGGATTCTCCAAG+GGG | + | chr8_1:89474870-89474889 | Msa1224500:CDS | 45.0% |
| AGGTTGGAGAGATTGACACA+AGG | + | chr8_1:89474895-89474914 | Msa1224500:CDS | 45.0% | |
| GGTTGGAGAGATTGACACAA+GGG | + | chr8_1:89474896-89474915 | Msa1224500:CDS | 45.0% | |
| ! | GCAGCTTTGACAGATTGGAA+TGG | - | chr8_1:89474924-89474943 | None:intergenic | 45.0% |
| TGGTGAAGTAGCAGTTCCTA+AGG | + | chr8_1:89474956-89474975 | Msa1224500:CDS | 45.0% | |
| TTGACAGCGAATCTGTCCTT+AGG | - | chr8_1:89474975-89474994 | None:intergenic | 45.0% | |
| TGTCAAGAGAAGATCGTCAG+AGG | + | chr8_1:89474989-89475008 | Msa1224500:CDS | 45.0% | |
| AAAGGAGACACAGCTTATCC+TGG | + | chr8_1:89475399-89475418 | Msa1224500:CDS | 45.0% | |
| GCTTGGTTGTCAAACTCTCA+AGG | - | chr8_1:89475519-89475538 | None:intergenic | 45.0% | |
| !! | CGCTTTGATTGCTGATTCCT+TGG | - | chr8_1:89475560-89475579 | None:intergenic | 45.0% |
| GCTGAAGCTGTGAGGAATAA+GGG | + | chr8_1:89475580-89475599 | Msa1224500:CDS | 45.0% | |
| AGAACTCACGAAAATCAGGC+AGG | + | chr8_1:89475723-89475742 | Msa1224500:CDS | 45.0% | |
| GTGCTCTATCGATGCTTTCA+TGG | - | chr8_1:89475863-89475882 | None:intergenic | 45.0% | |
| CGAAACAAGTGCAGAGATTG+AGG | + | chr8_1:89476023-89476042 | Msa1224500:CDS | 45.0% | |
| AACATCCTGCAGTGTCTTTG+TGG | - | chr8_1:89476127-89476146 | None:intergenic | 45.0% | |
| GAAAGAGCAAGATGAGCTGA+AGG | + | chr8_1:89476212-89476231 | Msa1224500:CDS | 45.0% | |
| GATCTTGCTTCTAACCTCAC+TGG | + | chr8_1:89476255-89476274 | Msa1224500:CDS | 45.0% | |
| ! | ATTGAAAAAGAGCGCGGAAG+AGG | + | chr8_1:89476281-89476300 | Msa1224500:CDS | 45.0% |
| GTAGAAGACATTGGCATCCA+CGG | - | chr8_1:89476325-89476344 | None:intergenic | 45.0% | |
| AGCCAAAGAGATGAGCAGAA+AGG | + | chr8_1:89476401-89476420 | Msa1224500:CDS | 45.0% | |
| AGCCTTTCTGCTCATCTCTT+TGG | - | chr8_1:89476406-89476425 | None:intergenic | 45.0% | |
| AGCTAACCTGAAAGCTGTTG+AGG | + | chr8_1:89476749-89476768 | Msa1224500:CDS | 45.0% | |
| TGAGGAAACAAAGGCTGCAA+TGG | + | chr8_1:89476767-89476786 | Msa1224500:CDS | 45.0% | |
| AACAAAGGCTGCAATGGAGA+CGG | + | chr8_1:89476773-89476792 | Msa1224500:CDS | 45.0% | |
| ! | TGAGAAAGGTGGATTCTCCA+AGG | + | chr8_1:89474868-89474887 | Msa1224500:CDS | 45.0% |
| ! | GAGAAAGGTGGATTCTCCAA+GGG | + | chr8_1:89474869-89474888 | Msa1224500:CDS | 45.0% |
| ! | AGAAAGGTGGATTCTCCAAG+GGG | + | chr8_1:89474870-89474889 | Msa1224500:CDS | 45.0% |
| AGGTTGGAGAGATTGACACA+AGG | + | chr8_1:89474895-89474914 | Msa1224500:CDS | 45.0% | |
| GGTTGGAGAGATTGACACAA+GGG | + | chr8_1:89474896-89474915 | Msa1224500:CDS | 45.0% | |
| ! | GCAGCTTTGACAGATTGGAA+TGG | - | chr8_1:89474924-89474943 | None:intergenic | 45.0% |
| TGGTGAAGTAGCAGTTCCTA+AGG | + | chr8_1:89474956-89474975 | Msa1224500:CDS | 45.0% | |
| TTGACAGCGAATCTGTCCTT+AGG | - | chr8_1:89474975-89474994 | None:intergenic | 45.0% | |
| TGTCAAGAGAAGATCGTCAG+AGG | + | chr8_1:89474989-89475008 | Msa1224500:CDS | 45.0% | |
| AAAGGAGACACAGCTTATCC+TGG | + | chr8_1:89475399-89475418 | Msa1224500:CDS | 45.0% | |
| GCTTGGTTGTCAAACTCTCA+AGG | - | chr8_1:89475519-89475538 | None:intergenic | 45.0% | |
| !! | CGCTTTGATTGCTGATTCCT+TGG | - | chr8_1:89475560-89475579 | None:intergenic | 45.0% |
| GCTGAAGCTGTGAGGAATAA+GGG | + | chr8_1:89475580-89475599 | Msa1224500:CDS | 45.0% | |
| AGAACTCACGAAAATCAGGC+AGG | + | chr8_1:89475723-89475742 | Msa1224500:CDS | 45.0% | |
| GTGCTCTATCGATGCTTTCA+TGG | - | chr8_1:89475863-89475882 | None:intergenic | 45.0% | |
| CGAAACAAGTGCAGAGATTG+AGG | + | chr8_1:89476023-89476042 | Msa1224500:CDS | 45.0% | |
| AACATCCTGCAGTGTCTTTG+TGG | - | chr8_1:89476127-89476146 | None:intergenic | 45.0% | |
| GAAAGAGCAAGATGAGCTGA+AGG | + | chr8_1:89476212-89476231 | Msa1224500:CDS | 45.0% | |
| GATCTTGCTTCTAACCTCAC+TGG | + | chr8_1:89476255-89476274 | Msa1224500:CDS | 45.0% | |
| ! | ATTGAAAAAGAGCGCGGAAG+AGG | + | chr8_1:89476281-89476300 | Msa1224500:CDS | 45.0% |
| GTAGAAGACATTGGCATCCA+CGG | - | chr8_1:89476325-89476344 | None:intergenic | 45.0% | |
| AGCCAAAGAGATGAGCAGAA+AGG | + | chr8_1:89476401-89476420 | Msa1224500:CDS | 45.0% | |
| AGCCTTTCTGCTCATCTCTT+TGG | - | chr8_1:89476406-89476425 | None:intergenic | 45.0% | |
| AGCTAACCTGAAAGCTGTTG+AGG | + | chr8_1:89476749-89476768 | Msa1224500:CDS | 45.0% | |
| TGAGGAAACAAAGGCTGCAA+TGG | + | chr8_1:89476767-89476786 | Msa1224500:CDS | 45.0% | |
| AACAAAGGCTGCAATGGAGA+CGG | + | chr8_1:89476773-89476792 | Msa1224500:CDS | 45.0% | |
| TACAAAAGGCCCTCTCGTCA+TGG | + | chr8_1:89475246-89475265 | Msa1224500:intron | 50.0% | |
| ACAAAAGGCCCTCTCGTCAT+GGG | + | chr8_1:89475247-89475266 | Msa1224500:intron | 50.0% | |
| AGCACTTTCCGACCTTGAGA+AGG | + | chr8_1:89475483-89475502 | Msa1224500:CDS | 50.0% | |
| CAAACTCTCAAGGGTCTCCT+TGG | - | chr8_1:89475509-89475528 | None:intergenic | 50.0% | |
| GGCTGAAGCTGTGAGGAATA+AGG | + | chr8_1:89475579-89475598 | Msa1224500:CDS | 50.0% | |
| AAGGATCGGTGAACTCTCAG+AGG | + | chr8_1:89475828-89475847 | Msa1224500:CDS | 50.0% | |
| AGAAGCCACAAAGACACTGC+AGG | + | chr8_1:89476119-89476138 | Msa1224500:CDS | 50.0% | |
| CTGTCTCCGATTGTAGCTTC+TGG | - | chr8_1:89476365-89476384 | None:intergenic | 50.0% | |
| AGAGATGAGCAGAAAGGCTC+AGG | + | chr8_1:89476407-89476426 | Msa1224500:CDS | 50.0% | |
| CGAGAGTCTACTTTGCACGT+CGG | - | chr8_1:89476565-89476584 | None:intergenic | 50.0% | |
| GCTATCATGGCTGAGTTGCA+AGG | + | chr8_1:89476687-89476706 | Msa1224500:CDS | 50.0% | |
| ! | GGCTTTGTGGTATGCAGAGA+TGG | + | chr8_1:89476794-89476813 | Msa1224500:CDS | 50.0% |
| TACAAAAGGCCCTCTCGTCA+TGG | + | chr8_1:89475246-89475265 | Msa1224500:intron | 50.0% | |
| ACAAAAGGCCCTCTCGTCAT+GGG | + | chr8_1:89475247-89475266 | Msa1224500:intron | 50.0% | |
| AGCACTTTCCGACCTTGAGA+AGG | + | chr8_1:89475483-89475502 | Msa1224500:CDS | 50.0% | |
| CAAACTCTCAAGGGTCTCCT+TGG | - | chr8_1:89475509-89475528 | None:intergenic | 50.0% | |
| GGCTGAAGCTGTGAGGAATA+AGG | + | chr8_1:89475579-89475598 | Msa1224500:CDS | 50.0% | |
| AAGGATCGGTGAACTCTCAG+AGG | + | chr8_1:89475828-89475847 | Msa1224500:CDS | 50.0% | |
| AGAAGCCACAAAGACACTGC+AGG | + | chr8_1:89476119-89476138 | Msa1224500:CDS | 50.0% | |
| CTGTCTCCGATTGTAGCTTC+TGG | - | chr8_1:89476365-89476384 | None:intergenic | 50.0% | |
| AGAGATGAGCAGAAAGGCTC+AGG | + | chr8_1:89476407-89476426 | Msa1224500:CDS | 50.0% | |
| CGAGAGTCTACTTTGCACGT+CGG | - | chr8_1:89476565-89476584 | None:intergenic | 50.0% | |
| GCTATCATGGCTGAGTTGCA+AGG | + | chr8_1:89476687-89476706 | Msa1224500:CDS | 50.0% | |
| ! | GGCTTTGTGGTATGCAGAGA+TGG | + | chr8_1:89476794-89476813 | Msa1224500:CDS | 50.0% |
| GATTCTCCAAGGGGAGAGGT+TGG | + | chr8_1:89474879-89474898 | Msa1224500:CDS | 55.0% | |
| ATCTCTCCAACCTCTCCCCT+TGG | - | chr8_1:89474888-89474907 | None:intergenic | 55.0% | |
| TTCCGACCTTGAGAAGGCCA+AGG | + | chr8_1:89475489-89475508 | Msa1224500:CDS | 55.0% | |
| ! | CTCCTTGGCCTTCTCAAGGT+CGG | - | chr8_1:89475494-89475513 | None:intergenic | 55.0% |
| TCAAAGCGGCTGAAGCTGTG+AGG | + | chr8_1:89475572-89475591 | Msa1224500:CDS | 55.0% | |
| ! | GAAAAAGAGCGCGGAAGAGG+CGG | + | chr8_1:89476284-89476303 | Msa1224500:CDS | 55.0% |
| ! | AAAAAGAGCGCGGAAGAGGC+GGG | + | chr8_1:89476285-89476304 | Msa1224500:CDS | 55.0% |
| ACATTGGCATCCACGGTACC+TGG | - | chr8_1:89476318-89476337 | None:intergenic | 55.0% | |
| CTGCAATGGAGACGGCTTTG+TGG | + | chr8_1:89476781-89476800 | Msa1224500:CDS | 55.0% | |
| GATTCTCCAAGGGGAGAGGT+TGG | + | chr8_1:89474879-89474898 | Msa1224500:CDS | 55.0% | |
| ATCTCTCCAACCTCTCCCCT+TGG | - | chr8_1:89474888-89474907 | None:intergenic | 55.0% | |
| TTCCGACCTTGAGAAGGCCA+AGG | + | chr8_1:89475489-89475508 | Msa1224500:CDS | 55.0% | |
| ! | CTCCTTGGCCTTCTCAAGGT+CGG | - | chr8_1:89475494-89475513 | None:intergenic | 55.0% |
| TCAAAGCGGCTGAAGCTGTG+AGG | + | chr8_1:89475572-89475591 | Msa1224500:CDS | 55.0% | |
| ! | GAAAAAGAGCGCGGAAGAGG+CGG | + | chr8_1:89476284-89476303 | Msa1224500:CDS | 55.0% |
| ! | AAAAAGAGCGCGGAAGAGGC+GGG | + | chr8_1:89476285-89476304 | Msa1224500:CDS | 55.0% |
| ACATTGGCATCCACGGTACC+TGG | - | chr8_1:89476318-89476337 | None:intergenic | 55.0% | |
| CTGCAATGGAGACGGCTTTG+TGG | + | chr8_1:89476781-89476800 | Msa1224500:CDS | 55.0% | |
| ! | GGTGGATTCTCCAAGGGGAG+AGG | + | chr8_1:89474875-89474894 | Msa1224500:CDS | 60.0% |
| ! | GGGTCTCCTTGGCCTTCTCA+AGG | - | chr8_1:89475498-89475517 | None:intergenic | 60.0% |
| GGCAAAGCTAGCAGCACTGC+AGG | + | chr8_1:89475765-89475784 | Msa1224500:CDS | 60.0% | |
| CTAGCAGCACTGCAGGCAAC+AGG | + | chr8_1:89475772-89475791 | Msa1224500:CDS | 60.0% | |
| ! | AAAAGAGCGCGGAAGAGGCG+GGG | + | chr8_1:89476286-89476305 | Msa1224500:CDS | 60.0% |
| ! | AGCTGAAGCATCCCGAGCAG+CGG | + | chr8_1:89476443-89476462 | Msa1224500:CDS | 60.0% |
| TGCTTCTTCAGCCGCTGCTC+GGG | - | chr8_1:89476457-89476476 | None:intergenic | 60.0% | |
| CTGCTTCTTCAGCCGCTGCT+CGG | - | chr8_1:89476458-89476477 | None:intergenic | 60.0% | |
| ! | GGTGGATTCTCCAAGGGGAG+AGG | + | chr8_1:89474875-89474894 | Msa1224500:CDS | 60.0% |
| ! | GGGTCTCCTTGGCCTTCTCA+AGG | - | chr8_1:89475498-89475517 | None:intergenic | 60.0% |
| GGCAAAGCTAGCAGCACTGC+AGG | + | chr8_1:89475765-89475784 | Msa1224500:CDS | 60.0% | |
| CTAGCAGCACTGCAGGCAAC+AGG | + | chr8_1:89475772-89475791 | Msa1224500:CDS | 60.0% | |
| ! | AAAAGAGCGCGGAAGAGGCG+GGG | + | chr8_1:89476286-89476305 | Msa1224500:CDS | 60.0% |
| ! | AGCTGAAGCATCCCGAGCAG+CGG | + | chr8_1:89476443-89476462 | Msa1224500:CDS | 60.0% |
| TGCTTCTTCAGCCGCTGCTC+GGG | - | chr8_1:89476457-89476476 | None:intergenic | 60.0% | |
| CTGCTTCTTCAGCCGCTGCT+CGG | - | chr8_1:89476458-89476477 | None:intergenic | 60.0% | |
| GCATCCACGGTACCTGGCTG+AGG | - | chr8_1:89476312-89476331 | None:intergenic | 65.0% | |
| GCATCCACGGTACCTGGCTG+AGG | - | chr8_1:89476312-89476331 | None:intergenic | 65.0% | |
| GAAGAGGCGGGGCCTCAGCC+AGG | + | chr8_1:89476297-89476316 | Msa1224500:CDS | 75.0% | |
| ! | GGGGCCTCAGCCAGGTACCG+TGG | + | chr8_1:89476305-89476324 | Msa1224500:CDS | 75.0% |
| GAAGAGGCGGGGCCTCAGCC+AGG | + | chr8_1:89476297-89476316 | Msa1224500:CDS | 75.0% | |
| ! | GGGGCCTCAGCCAGGTACCG+TGG | + | chr8_1:89476305-89476324 | Msa1224500:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 89474867 | 89476929 | 89474867 | ID=Msa1224500;Name=Msa1224500 |
| chr8_1 | mRNA | 89474867 | 89476929 | 89474867 | ID=Msa1224500-mRNA-1;Parent=Msa1224500;Name=Msa1224500-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|561 |
| chr8_1 | exon | 89474867 | 89475010 | 89474867 | ID=Msa1224500-mRNA-1:exon:32437;Parent=Msa1224500-mRNA-1 |
| chr8_1 | exon | 89475388 | 89476929 | 89475388 | ID=Msa1224500-mRNA-1:exon:32438;Parent=Msa1224500-mRNA-1 |
| chr8_1 | CDS | 89474867 | 89475010 | 89474867 | ID=Msa1224500-mRNA-1:cds;Parent=Msa1224500-mRNA-1 |
| chr8_1 | CDS | 89475388 | 89476929 | 89475388 | ID=Msa1224500-mRNA-1:cds;Parent=Msa1224500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
