Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130110 | XP_024625734.1 | 92.807 | 431 | 26 | 1 | 1 | 431 | 1 | 426 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130110 | sp|Q66GQ2|Y5162_ARATH | 35.491 | 479 | 193 | 12 | 16 | 415 | 17 | 458 | 4.51e-68 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130110 | A0A396H8E0 | 92.807 | 431 | 26 | 1 | 1 | 431 | 1 | 426 | 0.0 | 758 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001790 | Msa1130110 | 0.808215 | 3.454745e-50 | -8.615850e-47 |
| Msa0005350 | Msa1130110 | 0.806138 | 9.512617e-50 | -8.615850e-47 |
| Msa0007080 | Msa1130110 | 0.800135 | 1.660984e-48 | -8.615850e-47 |
| Msa0011720 | Msa1130110 | 0.824786 | 6.682121e-54 | -8.615850e-47 |
| Msa0014800 | Msa1130110 | 0.825368 | 4.870494e-54 | -8.615850e-47 |
| Msa0015300 | Msa1130110 | 0.800980 | 1.117048e-48 | -8.615850e-47 |
| Msa0050760 | Msa1130110 | 0.804184 | 2.439672e-49 | -8.615850e-47 |
| Msa0053900 | Msa1130110 | 0.820909 | 5.346453e-53 | -8.615850e-47 |
| Msa0071240 | Msa1130110 | 0.805663 | 1.197496e-49 | -8.615850e-47 |
| Msa0089360 | Msa1130110 | 0.805640 | 1.210998e-49 | -8.615850e-47 |
| Msa0099730 | Msa1130110 | 0.809709 | 1.654807e-50 | -8.615850e-47 |
| Msa0105700 | Msa1130110 | 0.800323 | 1.521188e-48 | -8.615850e-47 |
| Msa0108560 | Msa1130110 | 0.831740 | 1.406078e-55 | -8.615850e-47 |
| Msa0120340 | Msa1130110 | 0.806167 | 9.383961e-50 | -8.615850e-47 |
| Msa0608710 | Msa1130110 | 0.807094 | 5.977206e-50 | -8.615850e-47 |
| Msa0610590 | Msa1130110 | 0.804500 | 2.096415e-49 | -8.615850e-47 |
| Msa0615310 | Msa1130110 | 0.813336 | 2.694856e-51 | -8.615850e-47 |
| Msa0617830 | Msa1130110 | 0.805760 | 1.142362e-49 | -8.615850e-47 |
| Msa0628740 | Msa1130110 | 0.816702 | 4.826077e-52 | -8.615850e-47 |
| Msa0631120 | Msa1130110 | 0.801517 | 8.676350e-49 | -8.615850e-47 |
| Msa0633060 | Msa1130110 | 0.826611 | 2.466332e-54 | -8.615850e-47 |
| Msa0638320 | Msa1130110 | 0.805808 | 1.116399e-49 | -8.615850e-47 |
| Msa0647830 | Msa1130110 | 0.822159 | 2.749349e-53 | -8.615850e-47 |
| Msa0651190 | Msa1130110 | 0.803402 | 3.546212e-49 | -8.615850e-47 |
| Msa0651270 | Msa1130110 | 0.801028 | 1.092138e-48 | -8.615850e-47 |
| Msa0654720 | Msa1130110 | 0.823986 | 1.030468e-53 | -8.615850e-47 |
| Msa0657970 | Msa1130110 | 0.805403 | 1.357739e-49 | -8.615850e-47 |
| Msa0660300 | Msa1130110 | 0.818828 | 1.598755e-52 | -8.615850e-47 |
| Msa0666140 | Msa1130110 | 0.806480 | 8.058228e-50 | -8.615850e-47 |
| Msa0677270 | Msa1130110 | 0.803527 | 3.341296e-49 | -8.615850e-47 |
| Msa0678820 | Msa1130110 | 0.805382 | 1.371597e-49 | -8.615850e-47 |
| Msa0688670 | Msa1130110 | 0.961697 | 5.278045e-120 | -8.615850e-47 |
| Msa0690440 | Msa1130110 | 0.801955 | 7.051156e-49 | -8.615850e-47 |
| Msa0692230 | Msa1130110 | 0.811464 | 6.908966e-51 | -8.615850e-47 |
| Msa0693380 | Msa1130110 | 0.819217 | 1.304250e-52 | -8.615850e-47 |
| Msa0694250 | Msa1130110 | 0.814399 | 1.571799e-51 | -8.615850e-47 |
| Msa0697140 | Msa1130110 | 0.811879 | 5.613061e-51 | -8.615850e-47 |
| Msa0698360 | Msa1130110 | 0.835953 | 1.242886e-56 | -8.615850e-47 |
| Msa0712080 | Msa1130110 | 0.813374 | 2.644367e-51 | -8.615850e-47 |
| Msa0714340 | Msa1130110 | 0.805763 | 1.140843e-49 | -8.615850e-47 |
| Msa0724560 | Msa1130110 | 0.842080 | 3.217685e-58 | -8.615850e-47 |
| Msa0724830 | Msa1130110 | 0.830246 | 3.271817e-55 | -8.615850e-47 |
| Msa0726860 | Msa1130110 | 0.819749 | 9.861729e-53 | -8.615850e-47 |
| Msa0731180 | Msa1130110 | 0.827325 | 1.665407e-54 | -8.615850e-47 |
| Msa0749930 | Msa1130110 | 0.850221 | 1.953760e-60 | -8.615850e-47 |
| Msa0750350 | Msa1130110 | 0.802787 | 4.752491e-49 | -8.615850e-47 |
| Msa0750430 | Msa1130110 | 0.800985 | 1.114688e-48 | -8.615850e-47 |
| Msa0756310 | Msa1130110 | 0.818751 | 1.664294e-52 | -8.615850e-47 |
| Msa0757050 | Msa1130110 | 0.800672 | 1.291354e-48 | -8.615850e-47 |
| Msa0765380 | Msa1130110 | 0.809390 | 1.937261e-50 | -8.615850e-47 |
| Msa0767220 | Msa1130110 | 0.822334 | 2.504262e-53 | -8.615850e-47 |
| Msa0771720 | Msa1130110 | 0.822565 | 2.213054e-53 | -8.615850e-47 |
| Msa0788710 | Msa1130110 | 0.811122 | 8.196877e-51 | -8.615850e-47 |
| Msa0790510 | Msa1130110 | 0.804271 | 2.340152e-49 | -8.615850e-47 |
| Msa0795080 | Msa1130110 | 0.810940 | 8.976864e-51 | -8.615850e-47 |
| Msa0830420 | Msa1130110 | 0.847345 | 1.226398e-59 | -8.615850e-47 |
| Msa0835730 | Msa1130110 | 0.824872 | 6.378658e-54 | -8.615850e-47 |
| Msa0122590 | Msa1130110 | 0.819143 | 1.355472e-52 | -8.615850e-47 |
| Msa0148360 | Msa1130110 | 0.822797 | 1.954912e-53 | -8.615850e-47 |
| Msa0152170 | Msa1130110 | 0.819683 | 1.020950e-52 | -8.615850e-47 |
| Msa0159770 | Msa1130110 | 0.805583 | 1.244624e-49 | -8.615850e-47 |
| Msa0166870 | Msa1130110 | 0.815200 | 1.044212e-51 | -8.615850e-47 |
| Msa0178860 | Msa1130110 | -0.801999 | 6.907411e-49 | -8.615850e-47 |
| Msa0188630 | Msa1130110 | 0.820616 | 6.243155e-53 | -8.615850e-47 |
| Msa0188830 | Msa1130110 | 0.810103 | 1.361036e-50 | -8.615850e-47 |
| Msa0220440 | Msa1130110 | 0.821787 | 3.353684e-53 | -8.615850e-47 |
| Msa0223380 | Msa1130110 | 0.803979 | 2.691795e-49 | -8.615850e-47 |
| Msa0223740 | Msa1130110 | 0.805906 | 1.064751e-49 | -8.615850e-47 |
| Msa0233610 | Msa1130110 | 0.801563 | 8.487398e-49 | -8.615850e-47 |
| Msa0236440 | Msa1130110 | 0.842890 | 1.961331e-58 | -8.615850e-47 |
| Msa0372660 | Msa1130110 | 0.824378 | 8.336014e-54 | -8.615850e-47 |
| Msa0372670 | Msa1130110 | 0.807573 | 4.731282e-50 | -8.615850e-47 |
| Msa0379640 | Msa1130110 | 0.817339 | 3.470633e-52 | -8.615850e-47 |
| Msa0389340 | Msa1130110 | 0.804678 | 1.925149e-49 | -8.615850e-47 |
| Msa0389810 | Msa1130110 | 0.839160 | 1.870934e-57 | -8.615850e-47 |
| Msa0419620 | Msa1130110 | -0.838513 | 2.750089e-57 | -8.615850e-47 |
| Msa0428930 | Msa1130110 | 0.807740 | 4.360007e-50 | -8.615850e-47 |
| Msa0464900 | Msa1130110 | 0.827127 | 1.857157e-54 | -8.615850e-47 |
| Msa0465680 | Msa1130110 | -0.822612 | 2.158503e-53 | -8.615850e-47 |
| Msa0468130 | Msa1130110 | 0.835652 | 1.481768e-56 | -8.615850e-47 |
| Msa0473240 | Msa1130110 | 0.802649 | 5.075971e-49 | -8.615850e-47 |
| Msa0475490 | Msa1130110 | 0.806850 | 6.732652e-50 | -8.615850e-47 |
| Msa0477130 | Msa1130110 | -0.828720 | 7.685840e-55 | -8.615850e-47 |
| Msa0482190 | Msa1130110 | -0.812777 | 3.574644e-51 | -8.615850e-47 |
| Msa0982270 | Msa1130110 | 0.846257 | 2.432993e-59 | -8.615850e-47 |
| Msa0999040 | Msa1130110 | 0.824043 | 9.994754e-54 | -8.615850e-47 |
| Msa1002480 | Msa1130110 | 0.947143 | 1.192676e-105 | -8.615850e-47 |
| Msa1005410 | Msa1130110 | 0.806548 | 7.798802e-50 | -8.615850e-47 |
| Msa1021540 | Msa1130110 | 0.829922 | 3.924570e-55 | -8.615850e-47 |
| Msa1026790 | Msa1130110 | 0.800368 | 1.489368e-48 | -8.615850e-47 |
| Msa1032440 | Msa1130110 | 0.808421 | 3.123559e-50 | -8.615850e-47 |
| Msa1037700 | Msa1130110 | -0.837140 | 6.197019e-57 | -8.615850e-47 |
| Msa1070850 | Msa1130110 | 0.800314 | 1.527431e-48 | -8.615850e-47 |
| Msa1082500 | Msa1130110 | 0.829472 | 5.050356e-55 | -8.615850e-47 |
| Msa1092090 | Msa1130110 | 0.844594 | 6.865450e-59 | -8.615850e-47 |
| Msa1100480 | Msa1130110 | 0.833742 | 4.478626e-56 | -8.615850e-47 |
| Msa0243690 | Msa1130110 | 0.808736 | 2.675548e-50 | -8.615850e-47 |
| Msa0248980 | Msa1130110 | 0.809601 | 1.745253e-50 | -8.615850e-47 |
| Msa0249100 | Msa1130110 | 0.810118 | 1.351529e-50 | -8.615850e-47 |
| Msa0260810 | Msa1130110 | 0.801427 | 9.050085e-49 | -8.615850e-47 |
| Msa0269280 | Msa1130110 | 0.808675 | 2.755979e-50 | -8.615850e-47 |
| Msa0270100 | Msa1130110 | 0.812844 | 3.455229e-51 | -8.615850e-47 |
| Msa0270270 | Msa1130110 | 0.812389 | 4.344391e-51 | -8.615850e-47 |
| Msa0282250 | Msa1130110 | 0.809783 | 1.595413e-50 | -8.615850e-47 |
| Msa0299580 | Msa1130110 | 0.818368 | 2.032886e-52 | -8.615850e-47 |
| Msa0307830 | Msa1130110 | -0.804143 | 2.488782e-49 | -8.615850e-47 |
| Msa0309550 | Msa1130110 | 0.800171 | 1.633606e-48 | -8.615850e-47 |
| Msa0323180 | Msa1130110 | 0.825391 | 4.807897e-54 | -8.615850e-47 |
| Msa0335040 | Msa1130110 | 0.804826 | 1.792552e-49 | -8.615850e-47 |
| Msa1118110 | Msa1130110 | 0.820765 | 5.769088e-53 | -8.615850e-47 |
| Msa1118930 | Msa1130110 | 0.805297 | 1.428830e-49 | -8.615850e-47 |
| Msa1124540 | Msa1130110 | -0.808446 | 3.085142e-50 | -8.615850e-47 |
| Msa1130110 | Msa1130210 | -0.818374 | 2.026644e-52 | -8.615850e-47 |
| Msa1130110 | Msa1137600 | 0.802162 | 6.394182e-49 | -8.615850e-47 |
| Msa1130110 | Msa1142500 | 0.809524 | 1.813655e-50 | -8.615850e-47 |
| Msa1130110 | Msa1143270 | 0.801012 | 1.100783e-48 | -8.615850e-47 |
| Msa1130110 | Msa1148130 | 0.817723 | 2.843600e-52 | -8.615850e-47 |
| Msa1130110 | Msa1151710 | 0.808605 | 2.852597e-50 | -8.615850e-47 |
| Msa1130110 | Msa1158670 | 0.811986 | 5.321586e-51 | -8.615850e-47 |
| Msa1130110 | Msa1172670 | 0.829651 | 4.568697e-55 | -8.615850e-47 |
| Msa1130110 | Msa1187520 | 0.811549 | 6.621202e-51 | -8.615850e-47 |
| Msa1130110 | Msa1187530 | 0.800112 | 1.678896e-48 | -8.615850e-47 |
| Msa1130110 | Msa1199560 | 0.835538 | 1.582922e-56 | -8.615850e-47 |
| Msa1130110 | Msa1201560 | 0.802526 | 5.381224e-49 | -8.615850e-47 |
| Msa1130110 | Msa1206020 | 0.813804 | 2.126797e-51 | -8.615850e-47 |
| Msa1130110 | Msa1207380 | 0.810632 | 1.046584e-50 | -8.615850e-47 |
| Msa1130110 | Msa1214880 | 0.802177 | 6.350316e-49 | -8.615850e-47 |
| Msa1130110 | Msa1217660 | 0.832897 | 7.270152e-56 | -8.615850e-47 |
| Msa1130110 | Msa1217810 | 0.858423 | 8.323945e-63 | -8.615850e-47 |
| Msa1130110 | Msa1217830 | 0.832761 | 7.860773e-56 | -8.615850e-47 |
| Msa1130110 | Msa1224500 | 0.808354 | 3.227323e-50 | -8.615850e-47 |
| Msa1130110 | Msa1230830 | 0.800926 | 1.146046e-48 | -8.615850e-47 |
| Msa1130110 | Msa1233500 | 0.858493 | 7.931330e-63 | -8.615850e-47 |
| Msa1130110 | Msa1233890 | 0.804251 | 2.363092e-49 | -8.615850e-47 |
| Msa1130110 | Msa1258380 | -0.810066 | 1.386789e-50 | -8.615850e-47 |
| Msa1130110 | Msa1276440 | 0.823489 | 1.347654e-53 | -8.615850e-47 |
| Msa1130110 | Msa1279210 | 0.828497 | 8.700855e-55 | -8.615850e-47 |
| Msa1130110 | Msa1282920 | 0.835870 | 1.304648e-56 | -8.615850e-47 |
| Msa1130110 | Msa1294480 | 0.812263 | 4.629689e-51 | -8.615850e-47 |
| Msa1130110 | Msa1297090 | 0.826462 | 2.676559e-54 | -8.615850e-47 |
| Msa1130110 | Msa1300350 | -0.816267 | 6.039665e-52 | -8.615850e-47 |
| Msa1130110 | Msa1306750 | 0.841831 | 3.742134e-58 | -8.615850e-47 |
| Msa1130110 | Msa1307740 | 0.838845 | 2.257090e-57 | -8.615850e-47 |
| Msa1130110 | Msa1314340 | 0.835742 | 1.406027e-56 | -8.615850e-47 |
| Msa1130110 | Msa1320620 | 0.802666 | 5.034758e-49 | -8.615850e-47 |
| Msa1130110 | Msa1322190 | 0.855567 | 5.784741e-62 | -8.615850e-47 |
| Msa1130110 | Msa1328700 | 0.834963 | 2.211939e-56 | -8.615850e-47 |
| Msa1130110 | Msa1328850 | 0.814246 | 1.698480e-51 | -8.615850e-47 |
| Msa1130110 | Msa1333410 | 0.801128 | 1.042274e-48 | -8.615850e-47 |
| Msa1130110 | Msa1333810 | 0.800493 | 1.404396e-48 | -8.615850e-47 |
| Msa1130110 | Msa1340650 | 0.809113 | 2.221054e-50 | -8.615850e-47 |
| Msa1130110 | Msa1372580 | 0.810979 | 8.802890e-51 | -8.615850e-47 |
| Msa1130110 | Msa1382930 | 0.977233 | 2.258519e-143 | -8.615850e-47 |
| Msa1130110 | Msa1384350 | 0.805290 | 1.434004e-49 | -8.615850e-47 |
| Msa1130110 | Msa1392260 | 0.805575 | 1.249557e-49 | -8.615850e-47 |
| Msa1130110 | Msa1393040 | 0.802642 | 5.092321e-49 | -8.615850e-47 |
| Msa1130110 | Msa1404540 | 0.802025 | 6.823512e-49 | -8.615850e-47 |
| Msa1130110 | Msa1416390 | 0.802149 | 6.434220e-49 | -8.615850e-47 |
| Msa1130110 | Msa1419110 | 0.800714 | 1.266280e-48 | -8.615850e-47 |
| Msa1130110 | Msa1423450 | 0.821757 | 3.406482e-53 | -8.615850e-47 |
| Msa1130110 | Msa1425010 | 0.844570 | 6.966502e-59 | -8.615850e-47 |
| Msa1130110 | Msa1427830 | 0.815441 | 9.231397e-52 | -8.615850e-47 |
| Msa1130110 | Msa1429900 | 0.815675 | 8.187385e-52 | -8.615850e-47 |
| Msa1130110 | Msa1435370 | 0.830763 | 2.445187e-55 | -8.615850e-47 |
| Msa1130110 | Msa1437680 | 0.845157 | 4.837217e-59 | -8.615850e-47 |
| Msa1130110 | Msa1438910 | 0.972746 | 2.851745e-135 | -8.615850e-47 |
| Msa1130110 | Msa1440600 | 0.804064 | 2.584017e-49 | -8.615850e-47 |
| Msa1130110 | Msa1440910 | 0.836662 | 8.206071e-57 | -8.615850e-47 |
| Msa1130110 | Msa1441190 | 0.800874 | 1.174220e-48 | -8.615850e-47 |
| Msa1130110 | Msa1444250 | -0.810517 | 1.108522e-50 | -8.615850e-47 |
| Msa1130110 | Msa1451620 | -0.807396 | 5.159238e-50 | -8.615850e-47 |
| Msa1130110 | Msa1454110 | 0.811271 | 7.610299e-51 | -8.615850e-47 |
| Msa1130110 | Msa1454860 | 0.804497 | 2.100222e-49 | -8.615850e-47 |
| Msa1130110 | Msa1466730 | 0.806041 | 9.972311e-50 | -8.615850e-47 |
| Msa0484780 | Msa1130110 | 0.840733 | 7.280543e-58 | -8.615850e-47 |
| Msa0485120 | Msa1130110 | 0.809151 | 2.180103e-50 | -8.615850e-47 |
| Msa0485500 | Msa1130110 | -0.808437 | 3.098535e-50 | -8.615850e-47 |
| Msa0489030 | Msa1130110 | 0.821834 | 3.269896e-53 | -8.615850e-47 |
| Msa0511720 | Msa1130110 | -0.841341 | 5.038195e-58 | -8.615850e-47 |
| Msa0517330 | Msa1130110 | 0.803549 | 3.306639e-49 | -8.615850e-47 |
| Msa0532710 | Msa1130110 | 0.803572 | 3.269766e-49 | -8.615850e-47 |
| Msa0534590 | Msa1130110 | 0.805634 | 1.214151e-49 | -8.615850e-47 |
| Msa0547400 | Msa1130110 | 0.808969 | 2.384755e-50 | -8.615850e-47 |
| Msa0553460 | Msa1130110 | 0.816759 | 4.685455e-52 | -8.615850e-47 |
| Msa0561230 | Msa1130110 | 0.831394 | 1.711878e-55 | -8.615850e-47 |
| Msa0575470 | Msa1130110 | 0.852631 | 4.066516e-61 | -8.615850e-47 |
| Msa0577220 | Msa1130110 | 0.809237 | 2.089863e-50 | -8.615850e-47 |
| Msa0579130 | Msa1130110 | 0.806997 | 6.267204e-50 | -8.615850e-47 |
| Msa0599040 | Msa1130110 | 0.810452 | 1.144845e-50 | -8.615850e-47 |
| Msa0599580 | Msa1130110 | 0.811791 | 5.868292e-51 | -8.615850e-47 |
| Msa0599890 | Msa1130110 | 0.800316 | 1.526300e-48 | -8.615850e-47 |
| Msa0848900 | Msa1130110 | 0.840678 | 7.525776e-58 | -8.615850e-47 |
| Msa0869120 | Msa1130110 | 0.810049 | 1.398053e-50 | -8.615850e-47 |
| Msa0877410 | Msa1130110 | 0.841945 | 3.491738e-58 | -8.615850e-47 |
| Msa0881020 | Msa1130110 | 0.806555 | 7.772596e-50 | -8.615850e-47 |
| Msa0882510 | Msa1130110 | 0.816554 | 5.208387e-52 | -8.615850e-47 |
| Msa0899230 | Msa1130110 | 0.814675 | 1.365069e-51 | -8.615850e-47 |
| Msa0908170 | Msa1130110 | 0.839050 | 1.997568e-57 | -8.615850e-47 |
| Msa0910980 | Msa1130110 | -0.825728 | 4.001933e-54 | -8.615850e-47 |
| Msa0927670 | Msa1130110 | 0.825774 | 3.902126e-54 | -8.615850e-47 |
| Msa0933230 | Msa1130110 | 0.804495 | 2.101492e-49 | -8.615850e-47 |
| Msa0933310 | Msa1130110 | 0.804126 | 2.509139e-49 | -8.615850e-47 |
| Msa0944550 | Msa1130110 | 0.826677 | 2.378559e-54 | -8.615850e-47 |
| Msa0944770 | Msa1130110 | 0.822138 | 2.780103e-53 | -8.615850e-47 |
| Msa0960160 | Msa1130110 | 0.836736 | 7.858200e-57 | -8.615850e-47 |
| Msa0962770 | Msa1130110 | 0.815057 | 1.123383e-51 | -8.615850e-47 |
| Msa0965520 | Msa1130110 | 0.820728 | 5.883668e-53 | -8.615850e-47 |
| Msa0971090 | Msa1130110 | 0.801522 | 8.655560e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130110 | MtrunA17_Chr7g0275251 | 92.807 | 431 | 26 | 1 | 1 | 431 | 1 | 426 | 0.0 | 758 |
| Msa1130110 | MtrunA17_Chr8g0347871 | 45.905 | 464 | 186 | 12 | 15 | 438 | 14 | 452 | 4.95e-109 | 333 |
| Msa1130110 | MtrunA17_Chr5g0397031 | 41.873 | 363 | 145 | 8 | 54 | 358 | 60 | 414 | 7.24e-75 | 246 |
| Msa1130110 | MtrunA17_Chr7g0266861 | 27.488 | 422 | 201 | 14 | 22 | 357 | 36 | 438 | 1.15e-25 | 110 |
| Msa1130110 | MtrunA17_Chr3g0098801 | 25.429 | 350 | 207 | 10 | 135 | 444 | 199 | 534 | 6.04e-22 | 99.0 |
| Msa1130110 | MtrunA17_Chr5g0444041 | 29.130 | 230 | 149 | 3 | 129 | 358 | 188 | 403 | 6.47e-22 | 98.6 |
| Msa1130110 | MtrunA17_Chr4g0026051 | 26.131 | 398 | 221 | 13 | 22 | 356 | 48 | 435 | 8.02e-19 | 89.4 |
| Msa1130110 | MtrunA17_Chr2g0321731 | 26.792 | 265 | 180 | 5 | 116 | 375 | 205 | 460 | 3.48e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1130110 | AT5G41620.1 | 35.491 | 479 | 193 | 12 | 16 | 415 | 17 | 458 | 4.59e-69 | 231 |
| Msa1130110 | AT5G41620.4 | 40.282 | 355 | 162 | 7 | 92 | 415 | 6 | 341 | 5.54e-65 | 217 |
| Msa1130110 | AT5G41620.3 | 40.282 | 355 | 162 | 7 | 92 | 415 | 6 | 341 | 5.54e-65 | 217 |
| Msa1130110 | AT1G64180.1 | 36.782 | 348 | 154 | 7 | 62 | 360 | 61 | 391 | 1.26e-55 | 194 |
| Msa1130110 | AT5G41620.2 | 42.756 | 283 | 137 | 6 | 139 | 415 | 36 | 299 | 3.61e-55 | 190 |
| Msa1130110 | AT2G46250.1 | 35.207 | 338 | 157 | 7 | 27 | 329 | 20 | 330 | 8.24e-42 | 154 |
| Msa1130110 | AT3G11590.1 | 29.647 | 425 | 206 | 11 | 13 | 357 | 35 | 446 | 1.74e-35 | 139 |
| Msa1130110 | AT2G46250.2 | 40.580 | 207 | 102 | 2 | 123 | 329 | 54 | 239 | 2.00e-33 | 129 |
| Msa1130110 | AT3G11590.2 | 33.790 | 219 | 141 | 2 | 139 | 357 | 70 | 284 | 2.83e-27 | 114 |
| Msa1130110 | AT1G50660.1 | 27.574 | 272 | 173 | 8 | 129 | 396 | 212 | 463 | 9.03e-25 | 107 |
| Msa1130110 | AT3G20350.1 | 24.852 | 338 | 217 | 10 | 75 | 396 | 140 | 456 | 4.60e-24 | 105 |
Find 107 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCCTTGACTTCTTTAA+TGG | 0.167681 | 7_3:-82196355 | None:intergenic |
| GGTGGAAAAGTTGAAACTTT+TGG | 0.234292 | 7_3:+82194410 | Msa1130110:CDS |
| AGTAAAAGACAATACATTTA+TGG | 0.302608 | 7_3:+82196861 | Msa1130110:three_prime_UTR |
| TTCATAATCTCTTACTCCTT+TGG | 0.317548 | 7_3:-82196085 | None:intergenic |
| TCACCCTTGCCTACCTTCAT+TGG | 0.324543 | 7_3:+82196377 | Msa1130110:CDS |
| GCGGATAAGGATCGCATTAA+TGG | 0.328056 | 7_3:+82196138 | Msa1130110:CDS |
| CCATTCTGCAGTTACAGTTA+AGG | 0.372039 | 7_3:+82196756 | Msa1130110:three_prime_UTR |
| TCAAAATTTCAAGTTGAAGA+TGG | 0.377914 | 7_3:+82194344 | Msa1130110:exon |
| ATTGAGCTAAGGCAATTAGA+AGG | 0.381758 | 7_3:-82195330 | None:intergenic |
| TTCTAATTGCCTTAGCTCAA+TGG | 0.385938 | 7_3:+82195332 | Msa1130110:CDS |
| CACTAGCCAGCTTCTGATAC+AGG | 0.387417 | 7_3:-82195963 | None:intergenic |
| TACTTCACATTTCAGAGGCT+TGG | 0.392687 | 7_3:+82196181 | Msa1130110:CDS |
| ATTGGATTCCTTTCAACTAA+AGG | 0.395468 | 7_3:+82196395 | Msa1130110:CDS |
| ACTGCTTGAAGCAAGGTTAG+AGG | 0.396153 | 7_3:+82196888 | Msa1130110:three_prime_UTR |
| GAAAATGAATAAGCAGGAAA+TGG | 0.398382 | 7_3:+82195807 | Msa1130110:CDS |
| TGAAATTAATACAGCATTGA+AGG | 0.403657 | 7_3:+82196536 | Msa1130110:CDS |
| CATTCTGCAGTTACAGTTAA+GGG | 0.406187 | 7_3:+82196757 | Msa1130110:three_prime_UTR |
| TTGGAGAAGAGAGGAGGAAG+AGG | 0.410484 | 7_3:+82194429 | Msa1130110:CDS |
| AGACTGAGACATGTTGAAAT+CGG | 0.412710 | 7_3:-82196818 | None:intergenic |
| GAAAAGGGAAGAAGGAATAA+TGG | 0.415845 | 7_3:+82194389 | Msa1130110:CDS |
| TGTTTCCAACTAACTGTTCA+AGG | 0.418652 | 7_3:-82196669 | None:intergenic |
| TATGCATAATAGTGCGGATA+AGG | 0.427280 | 7_3:+82196125 | Msa1130110:CDS |
| CACAGCCTTGAACAGTTAGT+TGG | 0.447691 | 7_3:+82196664 | Msa1130110:three_prime_UTR |
| TAGCCGGCGTCTTGAAGAAC+AGG | 0.450663 | 7_3:+82195699 | Msa1130110:CDS |
| ATGTGATTCTATTCTACAAA+AGG | 0.451168 | 7_3:-82197001 | None:intergenic |
| TATATCCTGAGAGTATTTGC+AGG | 0.458388 | 7_3:+82196719 | Msa1130110:three_prime_UTR |
| CTTAACAAGTGCTTTGTTGA+GGG | 0.464066 | 7_3:+82196504 | Msa1130110:CDS |
| CCAACAAGTTTGAACAGAAA+AGG | 0.465731 | 7_3:+82196466 | Msa1130110:CDS |
| TATTGTCTCCTTTAGTTGAA+AGG | 0.466986 | 7_3:-82196403 | None:intergenic |
| ATCAGTCGACAGAAATTGTT+CGG | 0.469683 | 7_3:+82195290 | Msa1130110:CDS |
| TTTGTCATCAGAAGGTGATA+AGG | 0.472314 | 7_3:+82196696 | Msa1130110:three_prime_UTR |
| TATGAGGAGGCTCATGGTGG+TGG | 0.473227 | 7_3:-82194593 | None:intergenic |
| GAAATCTCTGTGCTAAACTC+TGG | 0.476454 | 7_3:+82194559 | Msa1130110:CDS |
| AACTCTTGTTGATGAGAAGA+AGG | 0.480434 | 7_3:-82194501 | None:intergenic |
| GTGACATGAATTAATTCCCT+TGG | 0.485875 | 7_3:-82196644 | None:intergenic |
| AGAAAAGAAAATGAATAAGC+AGG | 0.487246 | 7_3:+82195801 | Msa1130110:CDS |
| TTAATGGTGATAGCCTTGAT+AGG | 0.491514 | 7_3:+82196154 | Msa1130110:CDS |
| TACTTACTTCCATTGAGCTA+AGG | 0.494927 | 7_3:-82195341 | None:intergenic |
| GAGAACCTTGACTAACTCTC+TGG | 0.496123 | 7_3:-82195671 | None:intergenic |
| AAAGTCCACCAGAAAATGAT+AGG | 0.498720 | 7_3:+82196614 | Msa1130110:three_prime_UTR |
| CCTTGACTTCTTTAATGGAG+GGG | 0.499105 | 7_3:-82196350 | None:intergenic |
| TCCTTGACTTCTTTAATGGA+GGG | 0.499288 | 7_3:-82196351 | None:intergenic |
| AGGAAGAGATTGAAGATGAA+AGG | 0.499321 | 7_3:+82195917 | Msa1130110:CDS |
| CTCGAGTCTCTAGCAGATGC+TGG | 0.502686 | 7_3:-82195231 | None:intergenic |
| AAGCAAGTTCAAGATGGTAT+TGG | 0.504529 | 7_3:+82196225 | Msa1130110:CDS |
| AGAAGAGAGGAGGAAGAGGA+AGG | 0.512890 | 7_3:+82194433 | Msa1130110:CDS |
| TTCCTTGACTTCTTTAATGG+AGG | 0.515224 | 7_3:-82196352 | None:intergenic |
| GACTGAGACATGTTGAAATC+GGG | 0.515513 | 7_3:-82196817 | None:intergenic |
| CATCACACAAATTCTCCAAA+AGG | 0.518761 | 7_3:-82196056 | None:intergenic |
| AGAAAGCCTGTATCAGAAGC+TGG | 0.520623 | 7_3:+82195957 | Msa1130110:CDS |
| GTCTACTAACAAATTACCTA+GGG | 0.524454 | 7_3:+82196837 | Msa1130110:three_prime_UTR |
| CACCAGAAAATGATAGGTGC+AGG | 0.525944 | 7_3:+82196620 | Msa1130110:three_prime_UTR |
| CCCCTCCATTAAAGAAGTCA+AGG | 0.526840 | 7_3:+82196350 | Msa1130110:CDS |
| AGTTGAAAGGAATCCAATGA+AGG | 0.527897 | 7_3:-82196390 | None:intergenic |
| TTCAAACTTGTTGGTACCAA+CGG | 0.528206 | 7_3:-82196457 | None:intergenic |
| CAACTATTGAATGTGTCTCT+AGG | 0.530200 | 7_3:-82196257 | None:intergenic |
| TGTGAAGTATTAGCCTATCA+AGG | 0.530785 | 7_3:-82196167 | None:intergenic |
| AACAGTTCTTTGTCATCAGA+AGG | 0.531010 | 7_3:+82196688 | Msa1130110:three_prime_UTR |
| AATAGTGAAAGCTCTGATAG+TGG | 0.535399 | 7_3:+82195738 | Msa1130110:CDS |
| GCTTCCTCGGCAAAATTATG+AGG | 0.538410 | 7_3:-82196432 | None:intergenic |
| GGTACCAACGGAAGCTTCCT+CGG | 0.539258 | 7_3:-82196445 | None:intergenic |
| TGTATGGAGAAAAGGGAAGA+AGG | 0.539368 | 7_3:+82194381 | Msa1130110:CDS |
| CCTTAACTGTAACTGCAGAA+TGG | 0.540574 | 7_3:-82196756 | None:intergenic |
| TCTTCCCTGCAAATACTCTC+AGG | 0.540737 | 7_3:-82196724 | None:intergenic |
| AAATCTCTGTGCTAAACTCT+GGG | 0.540999 | 7_3:+82194560 | Msa1130110:CDS |
| ACTTAACAAGTGCTTTGTTG+AGG | 0.542539 | 7_3:+82196503 | Msa1130110:CDS |
| AGTCTACTAACAAATTACCT+AGG | 0.542626 | 7_3:+82196836 | Msa1130110:three_prime_UTR |
| GTTCAACACCACCACCCACT+TGG | 0.555840 | 7_3:+82194463 | Msa1130110:CDS |
| TTGAGCTAAGGCAATTAGAA+GGG | 0.559447 | 7_3:-82195329 | None:intergenic |
| TTAACAAGTGCTTTGTTGAG+GGG | 0.561075 | 7_3:+82196505 | Msa1130110:CDS |
| TGGCAAAACTGCTTGAAGCA+AGG | 0.561650 | 7_3:+82196881 | Msa1130110:three_prime_UTR |
| ACAAGTCTCCAAGTGGGTGG+TGG | 0.563442 | 7_3:-82194471 | None:intergenic |
| TCACACAAAGTTGATTCTCT+AGG | 0.566264 | 7_3:-82196583 | None:intergenic |
| ACTAGATCTTTCTCAAACAC+AGG | 0.567197 | 7_3:+82195762 | Msa1130110:CDS |
| TCAAGGTTCTCAAACGTAGC+CGG | 0.567882 | 7_3:+82195683 | Msa1130110:CDS |
| GCTAATACTTCACATTTCAG+AGG | 0.570361 | 7_3:+82196176 | Msa1130110:CDS |
| TCATAGTAGTCCCTCTCACC+AGG | 0.572281 | 7_3:+82194617 | Msa1130110:CDS |
| CAAATGAAGCAAGTTCAAGA+TGG | 0.575876 | 7_3:+82196219 | Msa1130110:CDS |
| AAATGATAGGTGCAGGACCA+AGG | 0.580181 | 7_3:+82196627 | Msa1130110:three_prime_UTR |
| GAGGGACTACTATGACTATG+AGG | 0.581362 | 7_3:-82194609 | None:intergenic |
| GAATCCAATGAAGGTAGGCA+AGG | 0.585447 | 7_3:-82196381 | None:intergenic |
| AAGAGATTGAAGATGAAAGG+AGG | 0.590101 | 7_3:+82195920 | Msa1130110:CDS |
| AGCTGTAGTTCAATCAGTCA+AGG | 0.591551 | 7_3:+82195897 | Msa1130110:CDS |
| AATGATAGGTGCAGGACCAA+GGG | 0.594126 | 7_3:+82196628 | Msa1130110:three_prime_UTR |
| TATGACTATGAGGAGGCTCA+TGG | 0.595092 | 7_3:-82194599 | None:intergenic |
| ATGAGGAGGCTCATGGTGGT+GGG | 0.595906 | 7_3:-82194592 | None:intergenic |
| AAGAAAAGTACCTGGTGAGA+GGG | 0.598007 | 7_3:-82194627 | None:intergenic |
| CAAGAAAAGTACCTGGTGAG+AGG | 0.598348 | 7_3:-82194628 | None:intergenic |
| TCTTCTTGTTGACACACACA+CGG | 0.600674 | 7_3:+82194269 | None:intergenic |
| TTCTATTATGCATAATAGTG+CGG | 0.602383 | 7_3:+82196119 | Msa1130110:CDS |
| TTTGCCGAGGAAGCTTCCGT+TGG | 0.615175 | 7_3:+82196441 | Msa1130110:CDS |
| GAAAGGAATCCAATGAAGGT+AGG | 0.616541 | 7_3:-82196386 | None:intergenic |
| AAGGGAAGAAGGAATAATGG+TGG | 0.618908 | 7_3:+82194392 | Msa1130110:CDS |
| CAAGCATCAGTTGTTCAGCA+CGG | 0.633336 | 7_3:+82195264 | Msa1130110:CDS |
| GTCATCCAGAGAGTTAGTCA+AGG | 0.646355 | 7_3:+82195666 | Msa1130110:CDS |
| TGAGCTAAGGCAATTAGAAG+GGG | 0.649817 | 7_3:-82195328 | None:intergenic |
| ATATCCTGAGAGTATTTGCA+GGG | 0.650780 | 7_3:+82196720 | Msa1130110:three_prime_UTR |
| AATCCAATGAAGGTAGGCAA+GGG | 0.653423 | 7_3:-82196380 | None:intergenic |
| GAAGTGAAGTCTTTGTTACG+TGG | 0.664790 | 7_3:+82195994 | Msa1130110:CDS |
| TCAACAAGTCTCCAAGTGGG+TGG | 0.665483 | 7_3:-82194474 | None:intergenic |
| AAAGTCAACAAGTCTCCAAG+TGG | 0.666077 | 7_3:-82194478 | None:intergenic |
| AAGTCAACAAGTCTCCAAGT+GGG | 0.688185 | 7_3:-82194477 | None:intergenic |
| GGACTACTATGACTATGAGG+AGG | 0.700817 | 7_3:-82194606 | None:intergenic |
| GACTATGAGGAGGCTCATGG+TGG | 0.712982 | 7_3:-82194596 | None:intergenic |
| CATCCTGTTCTTCAAGACGC+CGG | 0.714018 | 7_3:-82195702 | None:intergenic |
| TCTACTAACAAATTACCTAG+GGG | 0.744257 | 7_3:+82196838 | Msa1130110:three_prime_UTR |
| GTTTGAACAGAAAAGGACTG+CGG | 0.744270 | 7_3:+82196473 | Msa1130110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTAATGACATTTT+TGG | + | chr7_3:82194675-82194694 | Msa1130110:intron | 10.0% |
| !! | AGAATGAAATAAATTTGAAT+AGG | + | chr7_3:82194973-82194992 | Msa1130110:intron | 15.0% |
| !!! | TCTTTTTGATTAAATTCTAA+GGG | + | chr7_3:82196943-82196962 | Msa1130110:three_prime_UTR | 15.0% |
| !! | AAACAGAAATTACCAATTAT+AGG | - | chr7_3:82194762-82194781 | None:intergenic | 20.0% |
| !! | AGTTCTATATATCAATTAAG+AGG | + | chr7_3:82194817-82194836 | Msa1130110:intron | 20.0% |
| !! | GTTCTATATATCAATTAAGA+GGG | + | chr7_3:82194818-82194837 | Msa1130110:intron | 20.0% |
| !! | ATTCTTTAACATCAACATTA+GGG | - | chr7_3:82194958-82194977 | None:intergenic | 20.0% |
| !! | AGTAAAAGACAATACATTTA+TGG | + | chr7_3:82196861-82196880 | Msa1130110:three_prime_UTR | 20.0% |
| !!! | CTCTTTTTGATTAAATTCTA+AGG | + | chr7_3:82196942-82196961 | Msa1130110:three_prime_UTR | 20.0% |
| !!! | CTTTTTGATTAAATTCTAAG+GGG | + | chr7_3:82196944-82196963 | Msa1130110:three_prime_UTR | 20.0% |
| !!! | AATCACATTGTAATTTTACA+TGG | + | chr7_3:82197016-82197035 | Msa1130110:three_prime_UTR | 20.0% |
| !!! | TCAAAATTTCAAGTTGAAGA+TGG | + | chr7_3:82194344-82194363 | Msa1130110:exon | 25.0% |
| ! | AGAAAAATGTATGGAGAAAA+GGG | + | chr7_3:82194374-82194393 | Msa1130110:CDS | 25.0% |
| ! | ATTCTTCTGATGAAAAATCA+AGG | - | chr7_3:82194906-82194925 | None:intergenic | 25.0% |
| ! | CATTCTTTAACATCAACATT+AGG | - | chr7_3:82194959-82194978 | None:intergenic | 25.0% |
| ! | AAAGGAAGAACACAATTATA+TGG | - | chr7_3:82195066-82195085 | None:intergenic | 25.0% |
| ! | AAACATTAATTCCTAAAGTC+AGG | + | chr7_3:82195112-82195131 | Msa1130110:intron | 25.0% |
| !!! | ATATTTTGAATTTCAACTGC+TGG | + | chr7_3:82195184-82195203 | Msa1130110:intron | 25.0% |
| ! | TAAACTTCTTGAGATTCAAA+TGG | - | chr7_3:82195380-82195399 | None:intergenic | 25.0% |
| !!! | GAAGCATTAAAATTGATTTG+AGG | + | chr7_3:82195478-82195497 | Msa1130110:intron | 25.0% |
| !! | AAAAGTGTATGTAAACTAGA+TGG | + | chr7_3:82195563-82195582 | Msa1130110:intron | 25.0% |
| !! | ACACATTCATCTTTTTATAC+CGG | - | chr7_3:82195618-82195637 | None:intergenic | 25.0% |
| !!! | TGTGTTATTTTTCGTAAAAC+AGG | + | chr7_3:82195633-82195652 | Msa1130110:intron | 25.0% |
| ! | AGAAAAGAAAATGAATAAGC+AGG | + | chr7_3:82195801-82195820 | Msa1130110:CDS | 25.0% |
| ! | TCGAAAGAGAAAAAAAAGAA+AGG | + | chr7_3:82196031-82196050 | Msa1130110:CDS | 25.0% |
| !! | AAAAAAAGAAAGGATCCTTT+TGG | + | chr7_3:82196041-82196060 | Msa1130110:CDS | 25.0% |
| ! | TTCTATTATGCATAATAGTG+CGG | + | chr7_3:82196119-82196138 | Msa1130110:CDS | 25.0% |
| ! | AATTTCCTTGACTTCTTTAA+TGG | - | chr7_3:82196358-82196377 | None:intergenic | 25.0% |
| !! | TGAAATTAATACAGCATTGA+AGG | + | chr7_3:82196536-82196555 | Msa1130110:CDS | 25.0% |
| !! | AATCAAAAAGAGCTTTTACT+AGG | - | chr7_3:82196934-82196953 | None:intergenic | 25.0% |
| ! | ATGTGATTCTATTCTACAAA+AGG | - | chr7_3:82197004-82197023 | None:intergenic | 25.0% |
| !! | TGTAATTTTACATGGTTAGA+TGG | + | chr7_3:82197024-82197043 | Msa1130110:three_prime_UTR | 25.0% |
| GGAAAGAAGAGAAAAATGTA+TGG | + | chr7_3:82194365-82194384 | Msa1130110:CDS | 30.0% | |
| GAGAAAAATGTATGGAGAAA+AGG | + | chr7_3:82194373-82194392 | Msa1130110:CDS | 30.0% | |
| !! | TACAAAACAAGAAAAGTACC+TGG | - | chr7_3:82194638-82194657 | None:intergenic | 30.0% |
| ! | TGTTTTCAGATGCCTATAAT+TGG | + | chr7_3:82194747-82194766 | Msa1130110:intron | 30.0% |
| !! | TCTGTTTCAGCTTTAAAAGT+TGG | + | chr7_3:82194775-82194794 | Msa1130110:intron | 30.0% |
| TAGGGATAGTTAATTCGAAA+AGG | - | chr7_3:82194940-82194959 | None:intergenic | 30.0% | |
| GAACACAATTATATGGACAT+TGG | - | chr7_3:82195059-82195078 | None:intergenic | 30.0% | |
| AGTCTTTCAGCTATCAATAA+AGG | - | chr7_3:82195084-82195103 | None:intergenic | 30.0% | |
| TCAAACATAATCCTGACTTT+AGG | - | chr7_3:82195126-82195145 | None:intergenic | 30.0% | |
| TTCATTAAAAATGCCTCAGA+AGG | - | chr7_3:82195536-82195555 | None:intergenic | 30.0% | |
| !! | TCTGAGGCATTTTTAATGAA+TGG | + | chr7_3:82195536-82195555 | Msa1130110:intron | 30.0% |
| ! | TCTTTTTATACCGGATGAAA+GGG | - | chr7_3:82195609-82195628 | None:intergenic | 30.0% |
| ! | ATCTTTTTATACCGGATGAA+AGG | - | chr7_3:82195610-82195629 | None:intergenic | 30.0% |
| GAAAATGAATAAGCAGGAAA+TGG | + | chr7_3:82195807-82195826 | Msa1130110:CDS | 30.0% | |
| TTCATAATCTCTTACTCCTT+TGG | - | chr7_3:82196088-82196107 | None:intergenic | 30.0% | |
| ATTGGATTCCTTTCAACTAA+AGG | + | chr7_3:82196395-82196414 | Msa1130110:CDS | 30.0% | |
| TATTGTCTCCTTTAGTTGAA+AGG | - | chr7_3:82196406-82196425 | None:intergenic | 30.0% | |
| !!! | GTTTTTTTCGACTGTTTAAC+AGG | - | chr7_3:82196787-82196806 | None:intergenic | 30.0% |
| AGTCTACTAACAAATTACCT+AGG | + | chr7_3:82196836-82196855 | Msa1130110:three_prime_UTR | 30.0% | |
| GTCTACTAACAAATTACCTA+GGG | + | chr7_3:82196837-82196856 | Msa1130110:three_prime_UTR | 30.0% | |
| TCTACTAACAAATTACCTAG+GGG | + | chr7_3:82196838-82196857 | Msa1130110:three_prime_UTR | 30.0% | |
| GAAAAGGGAAGAAGGAATAA+TGG | + | chr7_3:82194389-82194408 | Msa1130110:CDS | 35.0% | |
| ! | GGTGGAAAAGTTGAAACTTT+TGG | + | chr7_3:82194410-82194429 | Msa1130110:CDS | 35.0% |
| !! | TTGAAACTTTTGGAGAAGAG+AGG | + | chr7_3:82194420-82194439 | Msa1130110:CDS | 35.0% |
| ! | AACTCTTGTTGATGAGAAGA+AGG | - | chr7_3:82194504-82194523 | None:intergenic | 35.0% |
| AAATCTCTGTGCTAAACTCT+GGG | + | chr7_3:82194560-82194579 | Msa1130110:CDS | 35.0% | |
| !! | GCTTTAAAAGTTGGTGACTT+TGG | + | chr7_3:82194784-82194803 | Msa1130110:intron | 35.0% |
| !! | AAAAGTTGGTGACTTTGGTT+TGG | + | chr7_3:82194789-82194808 | Msa1130110:intron | 35.0% |
| ATCAGTCGACAGAAATTGTT+CGG | + | chr7_3:82195290-82195309 | Msa1130110:CDS | 35.0% | |
| TTGAGCTAAGGCAATTAGAA+GGG | - | chr7_3:82195332-82195351 | None:intergenic | 35.0% | |
| ATTGAGCTAAGGCAATTAGA+AGG | - | chr7_3:82195333-82195352 | None:intergenic | 35.0% | |
| TTCTAATTGCCTTAGCTCAA+TGG | + | chr7_3:82195332-82195351 | Msa1130110:CDS | 35.0% | |
| TACTTACTTCCATTGAGCTA+AGG | - | chr7_3:82195344-82195363 | None:intergenic | 35.0% | |
| ATTTGAGGAAAATCTCCATG+AGG | + | chr7_3:82195493-82195512 | Msa1130110:intron | 35.0% | |
| TTTGAGGAAAATCTCCATGA+GGG | + | chr7_3:82195494-82195513 | Msa1130110:intron | 35.0% | |
| ! | GATACTTTTACCCTTTCATC+CGG | + | chr7_3:82195596-82195615 | Msa1130110:intron | 35.0% |
| ! | AATAGTGAAAGCTCTGATAG+TGG | + | chr7_3:82195738-82195757 | Msa1130110:CDS | 35.0% |
| ACTAGATCTTTCTCAAACAC+AGG | + | chr7_3:82195762-82195781 | Msa1130110:CDS | 35.0% | |
| AGGAAGAGATTGAAGATGAA+AGG | + | chr7_3:82195917-82195936 | Msa1130110:CDS | 35.0% | |
| AAGAGATTGAAGATGAAAGG+AGG | + | chr7_3:82195920-82195939 | Msa1130110:CDS | 35.0% | |
| CATCACACAAATTCTCCAAA+AGG | - | chr7_3:82196059-82196078 | None:intergenic | 35.0% | |
| ! | TTGTGTGATGATTTTGCCAA+AGG | + | chr7_3:82196069-82196088 | Msa1130110:CDS | 35.0% |
| TATGCATAATAGTGCGGATA+AGG | + | chr7_3:82196125-82196144 | Msa1130110:CDS | 35.0% | |
| ! | TTAATGGTGATAGCCTTGAT+AGG | + | chr7_3:82196154-82196173 | Msa1130110:CDS | 35.0% |
| ! | TGTGAAGTATTAGCCTATCA+AGG | - | chr7_3:82196170-82196189 | None:intergenic | 35.0% |
| GCTAATACTTCACATTTCAG+AGG | + | chr7_3:82196176-82196195 | Msa1130110:CDS | 35.0% | |
| CAAATGAAGCAAGTTCAAGA+TGG | + | chr7_3:82196219-82196238 | Msa1130110:CDS | 35.0% | |
| AAGCAAGTTCAAGATGGTAT+TGG | + | chr7_3:82196225-82196244 | Msa1130110:CDS | 35.0% | |
| CAACTATTGAATGTGTCTCT+AGG | - | chr7_3:82196260-82196279 | None:intergenic | 35.0% | |
| TCCTTGACTTCTTTAATGGA+GGG | - | chr7_3:82196354-82196373 | None:intergenic | 35.0% | |
| TTCCTTGACTTCTTTAATGG+AGG | - | chr7_3:82196355-82196374 | None:intergenic | 35.0% | |
| AGTTGAAAGGAATCCAATGA+AGG | - | chr7_3:82196393-82196412 | None:intergenic | 35.0% | |
| !! | TTCAAACTTGTTGGTACCAA+CGG | - | chr7_3:82196460-82196479 | None:intergenic | 35.0% |
| ! | CCTTTTCTGTTCAAACTTGT+TGG | - | chr7_3:82196469-82196488 | None:intergenic | 35.0% |
| CCAACAAGTTTGAACAGAAA+AGG | + | chr7_3:82196466-82196485 | Msa1130110:CDS | 35.0% | |
| ! | ACTTAACAAGTGCTTTGTTG+AGG | + | chr7_3:82196503-82196522 | Msa1130110:CDS | 35.0% |
| ! | CTTAACAAGTGCTTTGTTGA+GGG | + | chr7_3:82196504-82196523 | Msa1130110:CDS | 35.0% |
| ! | TTAACAAGTGCTTTGTTGAG+GGG | + | chr7_3:82196505-82196524 | Msa1130110:CDS | 35.0% |
| ! | TCACACAAAGTTGATTCTCT+AGG | - | chr7_3:82196586-82196605 | None:intergenic | 35.0% |
| !!! | ATTTTCTGGTGGACTTTGTA+CGG | - | chr7_3:82196611-82196630 | None:intergenic | 35.0% |
| AAAGTCCACCAGAAAATGAT+AGG | + | chr7_3:82196614-82196633 | Msa1130110:three_prime_UTR | 35.0% | |
| GTGACATGAATTAATTCCCT+TGG | - | chr7_3:82196647-82196666 | None:intergenic | 35.0% | |
| TGTTTCCAACTAACTGTTCA+AGG | - | chr7_3:82196672-82196691 | None:intergenic | 35.0% | |
| AACAGTTCTTTGTCATCAGA+AGG | + | chr7_3:82196688-82196707 | Msa1130110:three_prime_UTR | 35.0% | |
| TTTGTCATCAGAAGGTGATA+AGG | + | chr7_3:82196696-82196715 | Msa1130110:three_prime_UTR | 35.0% | |
| !! | TATATCCTGAGAGTATTTGC+AGG | + | chr7_3:82196719-82196738 | Msa1130110:three_prime_UTR | 35.0% |
| !! | ATATCCTGAGAGTATTTGCA+GGG | + | chr7_3:82196720-82196739 | Msa1130110:three_prime_UTR | 35.0% |
| CATTCTGCAGTTACAGTTAA+GGG | + | chr7_3:82196757-82196776 | Msa1130110:three_prime_UTR | 35.0% | |
| AGACTGAGACATGTTGAAAT+CGG | - | chr7_3:82196821-82196840 | None:intergenic | 35.0% | |
| TGTATGGAGAAAAGGGAAGA+AGG | + | chr7_3:82194381-82194400 | Msa1130110:CDS | 40.0% | |
| AAGGGAAGAAGGAATAATGG+TGG | + | chr7_3:82194392-82194411 | Msa1130110:CDS | 40.0% | |
| !! | AAACTTTTGGAGAAGAGAGG+AGG | + | chr7_3:82194423-82194442 | Msa1130110:CDS | 40.0% |
| AAGTCAACAAGTCTCCAAGT+GGG | - | chr7_3:82194480-82194499 | None:intergenic | 40.0% | |
| AAAGTCAACAAGTCTCCAAG+TGG | - | chr7_3:82194481-82194500 | None:intergenic | 40.0% | |
| !!! | GCAGAGAGTGTTTTTGAAGT+GGG | - | chr7_3:82194537-82194556 | None:intergenic | 40.0% |
| !!! | TGCAGAGAGTGTTTTTGAAG+TGG | - | chr7_3:82194538-82194557 | None:intergenic | 40.0% |
| GAAATCTCTGTGCTAAACTC+TGG | + | chr7_3:82194559-82194578 | Msa1130110:CDS | 40.0% | |
| !! | AAGAAAAGTACCTGGTGAGA+GGG | - | chr7_3:82194630-82194649 | None:intergenic | 40.0% |
| TGAGCTAAGGCAATTAGAAG+GGG | - | chr7_3:82195331-82195350 | None:intergenic | 40.0% | |
| AGCTGTAGTTCAATCAGTCA+AGG | + | chr7_3:82195897-82195916 | Msa1130110:CDS | 40.0% | |
| GAAGTGAAGTCTTTGTTACG+TGG | + | chr7_3:82195994-82196013 | Msa1130110:CDS | 40.0% | |
| TACTTCACATTTCAGAGGCT+TGG | + | chr7_3:82196181-82196200 | Msa1130110:CDS | 40.0% | |
| CCTTGACTTCTTTAATGGAG+GGG | - | chr7_3:82196353-82196372 | None:intergenic | 40.0% | |
| AATCCAATGAAGGTAGGCAA+GGG | - | chr7_3:82196383-82196402 | None:intergenic | 40.0% | |
| GAAAGGAATCCAATGAAGGT+AGG | - | chr7_3:82196389-82196408 | None:intergenic | 40.0% | |
| ! | TTCACCTCATAATTTTGCCG+AGG | + | chr7_3:82196428-82196447 | Msa1130110:CDS | 40.0% |
| GTTTGAACAGAAAAGGACTG+CGG | + | chr7_3:82196473-82196492 | Msa1130110:CDS | 40.0% | |
| CCTTAACTGTAACTGCAGAA+TGG | - | chr7_3:82196759-82196778 | None:intergenic | 40.0% | |
| CCATTCTGCAGTTACAGTTA+AGG | + | chr7_3:82196756-82196775 | Msa1130110:three_prime_UTR | 40.0% | |
| GACTGAGACATGTTGAAATC+GGG | - | chr7_3:82196820-82196839 | None:intergenic | 40.0% | |
| ! | GTATTGTCTTTTACTCCCCT+AGG | - | chr7_3:82196856-82196875 | None:intergenic | 40.0% |
| TATGACTATGAGGAGGCTCA+TGG | - | chr7_3:82194602-82194621 | None:intergenic | 45.0% | |
| GGACTACTATGACTATGAGG+AGG | - | chr7_3:82194609-82194628 | None:intergenic | 45.0% | |
| GAGGGACTACTATGACTATG+AGG | - | chr7_3:82194612-82194631 | None:intergenic | 45.0% | |
| !! | CAAGAAAAGTACCTGGTGAG+AGG | - | chr7_3:82194631-82194650 | None:intergenic | 45.0% |
| GTACGTCAGCTCTCTTCATA+AGG | - | chr7_3:82195026-82195045 | None:intergenic | 45.0% | |
| CAAGCATCAGTTGTTCAGCA+CGG | + | chr7_3:82195264-82195283 | Msa1130110:CDS | 45.0% | |
| CATCGACGATAAATCCCTCA+TGG | - | chr7_3:82195511-82195530 | None:intergenic | 45.0% | |
| TATCGTCGATGATCCTTCTG+AGG | + | chr7_3:82195520-82195539 | Msa1130110:intron | 45.0% | |
| GTCATCCAGAGAGTTAGTCA+AGG | + | chr7_3:82195666-82195685 | Msa1130110:CDS | 45.0% | |
| GAGAACCTTGACTAACTCTC+TGG | - | chr7_3:82195674-82195693 | None:intergenic | 45.0% | |
| TCAAGGTTCTCAAACGTAGC+CGG | + | chr7_3:82195683-82195702 | Msa1130110:CDS | 45.0% | |
| AGAAAGCCTGTATCAGAAGC+TGG | + | chr7_3:82195957-82195976 | Msa1130110:CDS | 45.0% | |
| GCGGATAAGGATCGCATTAA+TGG | + | chr7_3:82196138-82196157 | Msa1130110:CDS | 45.0% | |
| CCCCTCCATTAAAGAAGTCA+AGG | + | chr7_3:82196350-82196369 | Msa1130110:CDS | 45.0% | |
| GAATCCAATGAAGGTAGGCA+AGG | - | chr7_3:82196384-82196403 | None:intergenic | 45.0% | |
| GCTTCCTCGGCAAAATTATG+AGG | - | chr7_3:82196435-82196454 | None:intergenic | 45.0% | |
| ! | CTGCACCTATCATTTTCTGG+TGG | - | chr7_3:82196622-82196641 | None:intergenic | 45.0% |
| CACCAGAAAATGATAGGTGC+AGG | + | chr7_3:82196620-82196639 | Msa1130110:three_prime_UTR | 45.0% | |
| ! | GTCCTGCACCTATCATTTTC+TGG | - | chr7_3:82196625-82196644 | None:intergenic | 45.0% |
| AAATGATAGGTGCAGGACCA+AGG | + | chr7_3:82196627-82196646 | Msa1130110:three_prime_UTR | 45.0% | |
| AATGATAGGTGCAGGACCAA+GGG | + | chr7_3:82196628-82196647 | Msa1130110:three_prime_UTR | 45.0% | |
| CACAGCCTTGAACAGTTAGT+TGG | + | chr7_3:82196664-82196683 | Msa1130110:three_prime_UTR | 45.0% | |
| TCTTCCCTGCAAATACTCTC+AGG | - | chr7_3:82196727-82196746 | None:intergenic | 45.0% | |
| TGGCAAAACTGCTTGAAGCA+AGG | + | chr7_3:82196881-82196900 | Msa1130110:three_prime_UTR | 45.0% | |
| ACTGCTTGAAGCAAGGTTAG+AGG | + | chr7_3:82196888-82196907 | Msa1130110:three_prime_UTR | 45.0% | |
| !! | AAAAAAAAATTAATTGAAAA+TGG | - | chr7_3:82194662-82194681 | None:intergenic | 5.0% |
| TTGGAGAAGAGAGGAGGAAG+AGG | + | chr7_3:82194429-82194448 | Msa1130110:CDS | 50.0% | |
| AGAAGAGAGGAGGAAGAGGA+AGG | + | chr7_3:82194433-82194452 | Msa1130110:CDS | 50.0% | |
| TCAACAAGTCTCCAAGTGGG+TGG | - | chr7_3:82194477-82194496 | None:intergenic | 50.0% | |
| TCATAGTAGTCCCTCTCACC+AGG | + | chr7_3:82194617-82194636 | Msa1130110:CDS | 50.0% | |
| ! | AGCAGATGCTGGCTGTATTG+CGG | - | chr7_3:82195223-82195242 | None:intergenic | 50.0% |
| CATCCTGTTCTTCAAGACGC+CGG | - | chr7_3:82195705-82195724 | None:intergenic | 50.0% | |
| CACTAGCCAGCTTCTGATAC+AGG | - | chr7_3:82195966-82195985 | None:intergenic | 50.0% | |
| TCACCCTTGCCTACCTTCAT+TGG | + | chr7_3:82196377-82196396 | Msa1130110:CDS | 50.0% | |
| GTTCAACACCACCACCCACT+TGG | + | chr7_3:82194463-82194482 | Msa1130110:CDS | 55.0% | |
| ACAAGTCTCCAAGTGGGTGG+TGG | - | chr7_3:82194474-82194493 | None:intergenic | 55.0% | |
| ATGAGGAGGCTCATGGTGGT+GGG | - | chr7_3:82194595-82194614 | None:intergenic | 55.0% | |
| TATGAGGAGGCTCATGGTGG+TGG | - | chr7_3:82194596-82194615 | None:intergenic | 55.0% | |
| GACTATGAGGAGGCTCATGG+TGG | - | chr7_3:82194599-82194618 | None:intergenic | 55.0% | |
| CTCGAGTCTCTAGCAGATGC+TGG | - | chr7_3:82195234-82195253 | None:intergenic | 55.0% | |
| TAGCCGGCGTCTTGAAGAAC+AGG | + | chr7_3:82195699-82195718 | Msa1130110:CDS | 55.0% | |
| TTTGCCGAGGAAGCTTCCGT+TGG | + | chr7_3:82196441-82196460 | Msa1130110:CDS | 55.0% | |
| GGTACCAACGGAAGCTTCCT+CGG | - | chr7_3:82196448-82196467 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 82194284 | 82197059 | 82194284 | ID=Msa1130110;Name=Msa1130110 |
| chr7_3 | mRNA | 82194284 | 82197059 | 82194284 | ID=Msa1130110-mRNA-1;Parent=Msa1130110;Name=Msa1130110-mRNA-1;_AED=0.19;_eAED=0.19;_QI=79|1|1|1|1|1|3|472|444 |
| chr7_3 | exon | 82194284 | 82194638 | 82194284 | ID=Msa1130110-mRNA-1:exon:24173;Parent=Msa1130110-mRNA-1 |
| chr7_3 | exon | 82195231 | 82195356 | 82195231 | ID=Msa1130110-mRNA-1:exon:24174;Parent=Msa1130110-mRNA-1 |
| chr7_3 | exon | 82195655 | 82197059 | 82195655 | ID=Msa1130110-mRNA-1:exon:24175;Parent=Msa1130110-mRNA-1 |
| chr7_3 | five_prime_UTR | 82194284 | 82194362 | 82194284 | ID=Msa1130110-mRNA-1:five_prime_utr;Parent=Msa1130110-mRNA-1 |
| chr7_3 | CDS | 82194363 | 82194638 | 82194363 | ID=Msa1130110-mRNA-1:cds;Parent=Msa1130110-mRNA-1 |
| chr7_3 | CDS | 82195231 | 82195356 | 82195231 | ID=Msa1130110-mRNA-1:cds;Parent=Msa1130110-mRNA-1 |
| chr7_3 | CDS | 82195655 | 82196587 | 82195655 | ID=Msa1130110-mRNA-1:cds;Parent=Msa1130110-mRNA-1 |
| chr7_3 | three_prime_UTR | 82196588 | 82197059 | 82196588 | ID=Msa1130110-mRNA-1:three_prime_utr;Parent=Msa1130110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
