Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002480 | XP_024625734.1 | 92.705 | 562 | 36 | 1 | 1 | 562 | 1 | 557 | 0.0 | 990 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002480 | sp|Q66GQ2|Y5162_ARATH | 36.603 | 418 | 168 | 8 | 16 | 358 | 17 | 412 | 4.90e-67 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002480 | A0A396H8E0 | 92.705 | 562 | 36 | 1 | 1 | 562 | 1 | 557 | 0.0 | 990 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001790 | Msa1002480 | 0.821815 | 3.303220e-53 | -8.615850e-47 |
| Msa0004880 | Msa1002480 | 0.801232 | 9.921804e-49 | -8.615850e-47 |
| Msa0004920 | Msa1002480 | 0.813590 | 2.370072e-51 | -8.615850e-47 |
| Msa0007080 | Msa1002480 | 0.808207 | 3.468656e-50 | -8.615850e-47 |
| Msa0011720 | Msa1002480 | 0.804417 | 2.181643e-49 | -8.615850e-47 |
| Msa0012040 | Msa1002480 | 0.827645 | 1.395444e-54 | -8.615850e-47 |
| Msa0014800 | Msa1002480 | 0.825125 | 5.560194e-54 | -8.615850e-47 |
| Msa0015300 | Msa1002480 | 0.807057 | 6.087226e-50 | -8.615850e-47 |
| Msa0023470 | Msa1002480 | 0.824938 | 6.152449e-54 | -8.615850e-47 |
| Msa0037700 | Msa1002480 | 0.830955 | 2.193468e-55 | -8.615850e-47 |
| Msa0048000 | Msa1002480 | 0.805465 | 1.317611e-49 | -8.615850e-47 |
| Msa0050760 | Msa1002480 | 0.802158 | 6.405724e-49 | -8.615850e-47 |
| Msa0051770 | Msa1002480 | 0.800681 | 1.285912e-48 | -8.615850e-47 |
| Msa0053900 | Msa1002480 | 0.804777 | 1.835162e-49 | -8.615850e-47 |
| Msa0071240 | Msa1002480 | 0.817634 | 2.979380e-52 | -8.615850e-47 |
| Msa0086650 | Msa1002480 | 0.821450 | 4.012575e-53 | -8.615850e-47 |
| Msa0089360 | Msa1002480 | 0.821862 | 3.221782e-53 | -8.615850e-47 |
| Msa0090100 | Msa1002480 | 0.810660 | 1.031988e-50 | -8.615850e-47 |
| Msa0092990 | Msa1002480 | 0.826977 | 2.017524e-54 | -8.615850e-47 |
| Msa0096450 | Msa1002480 | 0.805366 | 1.382057e-49 | -8.615850e-47 |
| Msa0102120 | Msa1002480 | 0.808867 | 2.507925e-50 | -8.615850e-47 |
| Msa0108560 | Msa1002480 | 0.820500 | 6.636264e-53 | -8.615850e-47 |
| Msa0112750 | Msa1002480 | 0.804741 | 1.867679e-49 | -8.615850e-47 |
| Msa0113750 | Msa1002480 | 0.816801 | 4.586411e-52 | -8.615850e-47 |
| Msa0117770 | Msa1002480 | 0.816556 | 5.203417e-52 | -8.615850e-47 |
| Msa0120340 | Msa1002480 | 0.812755 | 3.614818e-51 | -8.615850e-47 |
| Msa0606360 | Msa1002480 | 0.817048 | 4.035087e-52 | -8.615850e-47 |
| Msa0607540 | Msa1002480 | 0.812785 | 3.559318e-51 | -8.615850e-47 |
| Msa0608710 | Msa1002480 | 0.829160 | 6.012776e-55 | -8.615850e-47 |
| Msa0610430 | Msa1002480 | 0.820617 | 6.240408e-53 | -8.615850e-47 |
| Msa0610590 | Msa1002480 | 0.808765 | 2.637308e-50 | -8.615850e-47 |
| Msa0615310 | Msa1002480 | 0.831424 | 1.682976e-55 | -8.615850e-47 |
| Msa0628740 | Msa1002480 | 0.818011 | 2.448382e-52 | -8.615850e-47 |
| Msa0633060 | Msa1002480 | 0.834975 | 2.195774e-56 | -8.615850e-47 |
| Msa0638320 | Msa1002480 | 0.810196 | 1.300118e-50 | -8.615850e-47 |
| Msa0640380 | Msa1002480 | 0.802374 | 5.784223e-49 | -8.615850e-47 |
| Msa0647830 | Msa1002480 | 0.835477 | 1.640072e-56 | -8.615850e-47 |
| Msa0647980 | Msa1002480 | 0.821832 | 3.273005e-53 | -8.615850e-47 |
| Msa0649130 | Msa1002480 | 0.803754 | 2.997071e-49 | -8.615850e-47 |
| Msa0651190 | Msa1002480 | 0.806246 | 9.029808e-50 | -8.615850e-47 |
| Msa0651270 | Msa1002480 | 0.812914 | 3.335745e-51 | -8.615850e-47 |
| Msa0653490 | Msa1002480 | 0.829391 | 5.283995e-55 | -8.615850e-47 |
| Msa0654010 | Msa1002480 | 0.808185 | 3.506081e-50 | -8.615850e-47 |
| Msa0654720 | Msa1002480 | 0.857626 | 1.435943e-62 | -8.615850e-47 |
| Msa0657970 | Msa1002480 | 0.822736 | 2.019130e-53 | -8.615850e-47 |
| Msa0660300 | Msa1002480 | 0.831707 | 1.432768e-55 | -8.615850e-47 |
| Msa0662650 | Msa1002480 | 0.833791 | 4.353085e-56 | -8.615850e-47 |
| Msa0666140 | Msa1002480 | 0.809704 | 1.658990e-50 | -8.615850e-47 |
| Msa0669440 | Msa1002480 | 0.808773 | 2.626831e-50 | -8.615850e-47 |
| Msa0673460 | Msa1002480 | 0.823026 | 1.728117e-53 | -8.615850e-47 |
| Msa0677270 | Msa1002480 | 0.805386 | 1.368618e-49 | -8.615850e-47 |
| Msa0678820 | Msa1002480 | 0.818125 | 2.307395e-52 | -8.615850e-47 |
| Msa0688070 | Msa1002480 | 0.807173 | 5.751213e-50 | -8.615850e-47 |
| Msa0688670 | Msa1002480 | 0.948076 | 1.928235e-106 | -8.615850e-47 |
| Msa0690440 | Msa1002480 | 0.833722 | 4.530901e-56 | -8.615850e-47 |
| Msa0692230 | Msa1002480 | 0.821692 | 3.528048e-53 | -8.615850e-47 |
| Msa0693380 | Msa1002480 | 0.824676 | 7.092825e-54 | -8.615850e-47 |
| Msa0693600 | Msa1002480 | 0.800417 | 1.455204e-48 | -8.615850e-47 |
| Msa0694250 | Msa1002480 | 0.800812 | 1.209339e-48 | -8.615850e-47 |
| Msa0698360 | Msa1002480 | 0.859601 | 3.694626e-63 | -8.615850e-47 |
| Msa0708860 | Msa1002480 | 0.835482 | 1.635622e-56 | -8.615850e-47 |
| Msa0712080 | Msa1002480 | 0.828495 | 8.712000e-55 | -8.615850e-47 |
| Msa0714340 | Msa1002480 | 0.809255 | 2.071451e-50 | -8.615850e-47 |
| Msa0722930 | Msa1002480 | 0.812577 | 3.953907e-51 | -8.615850e-47 |
| Msa0723140 | Msa1002480 | 0.804808 | 1.808209e-49 | -8.615850e-47 |
| Msa0724560 | Msa1002480 | 0.832716 | 8.067563e-56 | -8.615850e-47 |
| Msa0724830 | Msa1002480 | 0.813384 | 2.630115e-51 | -8.615850e-47 |
| Msa0726860 | Msa1002480 | 0.812338 | 4.458938e-51 | -8.615850e-47 |
| Msa0731180 | Msa1002480 | 0.838648 | 2.538753e-57 | -8.615850e-47 |
| Msa0749930 | Msa1002480 | 0.862941 | 3.545859e-64 | -8.615850e-47 |
| Msa0750430 | Msa1002480 | 0.826499 | 2.623159e-54 | -8.615850e-47 |
| Msa0751210 | Msa1002480 | 0.800243 | 1.579016e-48 | -8.615850e-47 |
| Msa0756310 | Msa1002480 | 0.823283 | 1.505804e-53 | -8.615850e-47 |
| Msa0765380 | Msa1002480 | 0.814746 | 1.317003e-51 | -8.615850e-47 |
| Msa0767080 | Msa1002480 | 0.807656 | 4.544812e-50 | -8.615850e-47 |
| Msa0767220 | Msa1002480 | 0.807897 | 4.038291e-50 | -8.615850e-47 |
| Msa0771580 | Msa1002480 | 0.802702 | 4.948758e-49 | -8.615850e-47 |
| Msa0771720 | Msa1002480 | 0.843493 | 1.354398e-58 | -8.615850e-47 |
| Msa0788710 | Msa1002480 | 0.817779 | 2.762857e-52 | -8.615850e-47 |
| Msa0790510 | Msa1002480 | 0.827407 | 1.591040e-54 | -8.615850e-47 |
| Msa0795080 | Msa1002480 | 0.832870 | 7.384915e-56 | -8.615850e-47 |
| Msa0795920 | Msa1002480 | 0.807904 | 4.025064e-50 | -8.615850e-47 |
| Msa0798860 | Msa1002480 | 0.806367 | 8.515326e-50 | -8.615850e-47 |
| Msa0816590 | Msa1002480 | 0.816351 | 5.782613e-52 | -8.615850e-47 |
| Msa0830420 | Msa1002480 | 0.865483 | 5.716981e-65 | -8.615850e-47 |
| Msa0831590 | Msa1002480 | 0.812058 | 5.130774e-51 | -8.615850e-47 |
| Msa0835730 | Msa1002480 | 0.823504 | 1.336928e-53 | -8.615850e-47 |
| Msa0840820 | Msa1002480 | 0.806013 | 1.010805e-49 | -8.615850e-47 |
| Msa0122590 | Msa1002480 | 0.834139 | 3.561460e-56 | -8.615850e-47 |
| Msa0133130 | Msa1002480 | 0.823427 | 1.393081e-53 | -8.615850e-47 |
| Msa0137570 | Msa1002480 | 0.804440 | 2.157685e-49 | -8.615850e-47 |
| Msa0147920 | Msa1002480 | 0.816955 | 4.235239e-52 | -8.615850e-47 |
| Msa0148360 | Msa1002480 | 0.806082 | 9.774233e-50 | -8.615850e-47 |
| Msa0151180 | Msa1002480 | 0.802645 | 5.085412e-49 | -8.615850e-47 |
| Msa0152170 | Msa1002480 | 0.805551 | 1.264226e-49 | -8.615850e-47 |
| Msa0157100 | Msa1002480 | 0.818505 | 1.892746e-52 | -8.615850e-47 |
| Msa0159770 | Msa1002480 | 0.814056 | 1.870567e-51 | -8.615850e-47 |
| Msa0163780 | Msa1002480 | 0.806570 | 7.716734e-50 | -8.615850e-47 |
| Msa0166870 | Msa1002480 | 0.836105 | 1.136887e-56 | -8.615850e-47 |
| Msa0173990 | Msa1002480 | 0.802215 | 6.234939e-49 | -8.615850e-47 |
| Msa0178860 | Msa1002480 | -0.829465 | 5.069138e-55 | -8.615850e-47 |
| Msa0182570 | Msa1002480 | 0.802806 | 4.711354e-49 | -8.615850e-47 |
| Msa0188630 | Msa1002480 | 0.815508 | 8.918888e-52 | -8.615850e-47 |
| Msa0188830 | Msa1002480 | 0.831322 | 1.782739e-55 | -8.615850e-47 |
| Msa0191910 | Msa1002480 | 0.815946 | 7.121806e-52 | -8.615850e-47 |
| Msa0206010 | Msa1002480 | 0.812341 | 4.451355e-51 | -8.615850e-47 |
| Msa0210450 | Msa1002480 | 0.801381 | 9.251231e-49 | -8.615850e-47 |
| Msa0217680 | Msa1002480 | 0.815769 | 7.800024e-52 | -8.615850e-47 |
| Msa0220440 | Msa1002480 | 0.845343 | 4.307876e-59 | -8.615850e-47 |
| Msa0222340 | Msa1002480 | 0.813703 | 2.238583e-51 | -8.615850e-47 |
| Msa0223740 | Msa1002480 | 0.811583 | 6.511390e-51 | -8.615850e-47 |
| Msa0226890 | Msa1002480 | 0.807573 | 4.732661e-50 | -8.615850e-47 |
| Msa0233610 | Msa1002480 | 0.810781 | 9.719923e-51 | -8.615850e-47 |
| Msa0234020 | Msa1002480 | 0.802662 | 5.044379e-49 | -8.615850e-47 |
| Msa0236440 | Msa1002480 | 0.811198 | 7.894942e-51 | -8.615850e-47 |
| Msa0372660 | Msa1002480 | 0.801236 | 9.902022e-49 | -8.615850e-47 |
| Msa0376590 | Msa1002480 | 0.814602 | 1.417333e-51 | -8.615850e-47 |
| Msa0379640 | Msa1002480 | 0.860490 | 1.991987e-63 | -8.615850e-47 |
| Msa0388840 | Msa1002480 | 0.804421 | 2.177996e-49 | -8.615850e-47 |
| Msa0389340 | Msa1002480 | 0.823344 | 1.457073e-53 | -8.615850e-47 |
| Msa0389810 | Msa1002480 | 0.843119 | 1.704670e-58 | -8.615850e-47 |
| Msa0419620 | Msa1002480 | -0.823077 | 1.682021e-53 | -8.615850e-47 |
| Msa0426330 | Msa1002480 | 0.801141 | 1.035525e-48 | -8.615850e-47 |
| Msa0426360 | Msa1002480 | 0.807057 | 6.087472e-50 | -8.615850e-47 |
| Msa0426400 | Msa1002480 | 0.812656 | 3.797926e-51 | -8.615850e-47 |
| Msa0426900 | Msa1002480 | 0.813603 | 2.354253e-51 | -8.615850e-47 |
| Msa0428930 | Msa1002480 | 0.841202 | 5.483047e-58 | -8.615850e-47 |
| Msa0431690 | Msa1002480 | 0.806701 | 7.239430e-50 | -8.615850e-47 |
| Msa0433360 | Msa1002480 | 0.811482 | 6.848216e-51 | -8.615850e-47 |
| Msa0442200 | Msa1002480 | 0.822097 | 2.842392e-53 | -8.615850e-47 |
| Msa0453890 | Msa1002480 | 0.813918 | 2.007002e-51 | -8.615850e-47 |
| Msa0458010 | Msa1002480 | 0.804766 | 1.845430e-49 | -8.615850e-47 |
| Msa0464900 | Msa1002480 | 0.835160 | 1.972964e-56 | -8.615850e-47 |
| Msa0465680 | Msa1002480 | -0.816488 | 5.389668e-52 | -8.615850e-47 |
| Msa0468130 | Msa1002480 | 0.835467 | 1.650131e-56 | -8.615850e-47 |
| Msa0473080 | Msa1002480 | 0.810587 | 1.070228e-50 | -8.615850e-47 |
| Msa0475410 | Msa1002480 | 0.806028 | 1.003458e-49 | -8.615850e-47 |
| Msa0475490 | Msa1002480 | 0.836789 | 7.617804e-57 | -8.615850e-47 |
| Msa0477080 | Msa1002480 | 0.812805 | 3.523748e-51 | -8.615850e-47 |
| Msa0477130 | Msa1002480 | -0.838580 | 2.642618e-57 | -8.615850e-47 |
| Msa0479970 | Msa1002480 | 0.800534 | 1.378047e-48 | -8.615850e-47 |
| Msa0482190 | Msa1002480 | -0.808420 | 3.125056e-50 | -8.615850e-47 |
| Msa0982270 | Msa1002480 | 0.854545 | 1.146420e-61 | -8.615850e-47 |
| Msa0999040 | Msa1002480 | 0.845053 | 5.161415e-59 | -8.615850e-47 |
| Msa1000020 | Msa1002480 | 0.803786 | 2.951980e-49 | -8.615850e-47 |
| Msa1002480 | Msa1015790 | 0.807851 | 4.130430e-50 | -8.615850e-47 |
| Msa1002480 | Msa1015840 | 0.802419 | 5.660485e-49 | -8.615850e-47 |
| Msa1002480 | Msa1021540 | 0.848624 | 5.445228e-60 | -8.615850e-47 |
| Msa1002480 | Msa1032440 | 0.807883 | 4.065754e-50 | -8.615850e-47 |
| Msa1002480 | Msa1037700 | -0.832867 | 7.396918e-56 | -8.615850e-47 |
| Msa1002480 | Msa1039880 | 0.823460 | 1.368577e-53 | -8.615850e-47 |
| Msa1002480 | Msa1070850 | 0.812636 | 3.837725e-51 | -8.615850e-47 |
| Msa1002480 | Msa1074530 | 0.803438 | 3.486227e-49 | -8.615850e-47 |
| Msa1002480 | Msa1082500 | 0.846392 | 2.235407e-59 | -8.615850e-47 |
| Msa1002480 | Msa1084260 | 0.800838 | 1.194178e-48 | -8.615850e-47 |
| Msa1002480 | Msa1090260 | 0.808651 | 2.789103e-50 | -8.615850e-47 |
| Msa1002480 | Msa1091830 | 0.800883 | 1.169379e-48 | -8.615850e-47 |
| Msa1002480 | Msa1092090 | 0.859954 | 2.891920e-63 | -8.615850e-47 |
| Msa1002480 | Msa1098400 | 0.817931 | 2.552414e-52 | -8.615850e-47 |
| Msa1002480 | Msa1098420 | 0.807924 | 3.985705e-50 | -8.615850e-47 |
| Msa1002480 | Msa1100480 | 0.828218 | 1.015940e-54 | -8.615850e-47 |
| Msa1002480 | Msa1118110 | 0.829119 | 6.151773e-55 | -8.615850e-47 |
| Msa1002480 | Msa1118750 | 0.804924 | 1.709898e-49 | -8.615850e-47 |
| Msa1002480 | Msa1124540 | -0.814006 | 1.919052e-51 | -8.615850e-47 |
| Msa1002480 | Msa1130110 | 0.947143 | 1.192676e-105 | -8.615850e-47 |
| Msa1002480 | Msa1130210 | -0.807044 | 6.124767e-50 | -8.615850e-47 |
| Msa1002480 | Msa1142500 | 0.802610 | 5.169471e-49 | -8.615850e-47 |
| Msa1002480 | Msa1143270 | 0.827106 | 1.879047e-54 | -8.615850e-47 |
| Msa1002480 | Msa1144390 | 0.810493 | 1.121682e-50 | -8.615850e-47 |
| Msa1002480 | Msa1148130 | 0.818114 | 2.320438e-52 | -8.615850e-47 |
| Msa1002480 | Msa1148920 | 0.800712 | 1.267046e-48 | -8.615850e-47 |
| Msa1002480 | Msa1151710 | 0.805707 | 1.172447e-49 | -8.615850e-47 |
| Msa1002480 | Msa1158670 | 0.832714 | 8.074634e-56 | -8.615850e-47 |
| Msa1002480 | Msa1162550 | -0.804125 | 2.510101e-49 | -8.615850e-47 |
| Msa1002480 | Msa1170730 | 0.813019 | 3.163029e-51 | -8.615850e-47 |
| Msa1002480 | Msa1172230 | 0.807751 | 4.337107e-50 | -8.615850e-47 |
| Msa1002480 | Msa1172670 | 0.842476 | 2.526716e-58 | -8.615850e-47 |
| Msa1002480 | Msa1174040 | 0.812055 | 5.138890e-51 | -8.615850e-47 |
| Msa1002480 | Msa1183100 | -0.804521 | 2.075785e-49 | -8.615850e-47 |
| Msa1002480 | Msa1187520 | 0.814308 | 1.645707e-51 | -8.615850e-47 |
| Msa1002480 | Msa1199560 | 0.842650 | 2.272225e-58 | -8.615850e-47 |
| Msa1002480 | Msa1201560 | 0.824481 | 7.885052e-54 | -8.615850e-47 |
| Msa1002480 | Msa1205130 | 0.817314 | 3.517391e-52 | -8.615850e-47 |
| Msa1002480 | Msa1206020 | 0.805516 | 1.285315e-49 | -8.615850e-47 |
| Msa1002480 | Msa1207380 | 0.824853 | 6.443327e-54 | -8.615850e-47 |
| Msa1002480 | Msa1207420 | 0.813634 | 2.317155e-51 | -8.615850e-47 |
| Msa1002480 | Msa1208180 | 0.807411 | 5.121752e-50 | -8.615850e-47 |
| Msa1002480 | Msa1214880 | 0.811267 | 7.624282e-51 | -8.615850e-47 |
| Msa1002480 | Msa1214890 | 0.810441 | 1.151215e-50 | -8.615850e-47 |
| Msa1002480 | Msa1217470 | 0.808215 | 3.455368e-50 | -8.615850e-47 |
| Msa1002480 | Msa1217660 | 0.816912 | 4.330808e-52 | -8.615850e-47 |
| Msa1002480 | Msa1217810 | 0.860346 | 2.202873e-63 | -8.615850e-47 |
| Msa1002480 | Msa1217830 | 0.825183 | 5.385284e-54 | -8.615850e-47 |
| Msa1002480 | Msa1224480 | 0.807997 | 3.846155e-50 | -8.615850e-47 |
| Msa1002480 | Msa1224500 | 0.830147 | 3.459000e-55 | -8.615850e-47 |
| Msa1002480 | Msa1230830 | 0.818576 | 1.823845e-52 | -8.615850e-47 |
| Msa1002480 | Msa1233500 | 0.857018 | 2.171369e-62 | -8.615850e-47 |
| Msa1002480 | Msa1233890 | 0.816114 | 6.534288e-52 | -8.615850e-47 |
| Msa1002480 | Msa1240180 | 0.810246 | 1.268073e-50 | -8.615850e-47 |
| Msa1002480 | Msa1247250 | 0.817090 | 3.950001e-52 | -8.615850e-47 |
| Msa1002480 | Msa1250890 | 0.806719 | 7.176266e-50 | -8.615850e-47 |
| Msa1002480 | Msa1257600 | 0.800461 | 1.425491e-48 | -8.615850e-47 |
| Msa1002480 | Msa1258380 | -0.805405 | 1.356218e-49 | -8.615850e-47 |
| Msa1002480 | Msa1267260 | 0.818881 | 1.555237e-52 | -8.615850e-47 |
| Msa1002480 | Msa1276440 | 0.824256 | 8.906108e-54 | -8.615850e-47 |
| Msa1002480 | Msa1279210 | 0.851319 | 9.588700e-61 | -8.615850e-47 |
| Msa1002480 | Msa1282920 | 0.821441 | 4.030385e-53 | -8.615850e-47 |
| Msa1002480 | Msa1288420 | 0.810518 | 1.107718e-50 | -8.615850e-47 |
| Msa1002480 | Msa1294480 | 0.832914 | 7.203621e-56 | -8.615850e-47 |
| Msa1002480 | Msa1300350 | -0.808395 | 3.162984e-50 | -8.615850e-47 |
| Msa1002480 | Msa1302190 | -0.802879 | 4.549134e-49 | -8.615850e-47 |
| Msa1002480 | Msa1305340 | 0.811184 | 7.949052e-51 | -8.615850e-47 |
| Msa1002480 | Msa1306750 | 0.847934 | 8.443356e-60 | -8.615850e-47 |
| Msa1002480 | Msa1307740 | 0.841914 | 3.557895e-58 | -8.615850e-47 |
| Msa1002480 | Msa1314340 | 0.849767 | 2.617352e-60 | -8.615850e-47 |
| Msa1002480 | Msa1318990 | 0.812024 | 5.219095e-51 | -8.615850e-47 |
| Msa1002480 | Msa1320620 | 0.823390 | 1.421051e-53 | -8.615850e-47 |
| Msa1002480 | Msa1322190 | 0.848236 | 6.969577e-60 | -8.615850e-47 |
| Msa1002480 | Msa1327550 | 0.832026 | 1.195643e-55 | -8.615850e-47 |
| Msa1002480 | Msa1328700 | 0.847317 | 1.248705e-59 | -8.615850e-47 |
| Msa1002480 | Msa1328850 | 0.806408 | 8.345998e-50 | -8.615850e-47 |
| Msa1002480 | Msa1331910 | 0.803614 | 3.205723e-49 | -8.615850e-47 |
| Msa1002480 | Msa1331920 | 0.816322 | 5.871759e-52 | -8.615850e-47 |
| Msa1002480 | Msa1333410 | 0.833352 | 5.604097e-56 | -8.615850e-47 |
| Msa1002480 | Msa1333710 | 0.817168 | 3.793385e-52 | -8.615850e-47 |
| Msa1002480 | Msa1333810 | 0.824243 | 8.970995e-54 | -8.615850e-47 |
| Msa1002480 | Msa1340650 | 0.836986 | 6.781982e-57 | -8.615850e-47 |
| Msa1002480 | Msa1351550 | 0.807202 | 5.672277e-50 | -8.615850e-47 |
| Msa1002480 | Msa1352330 | 0.805055 | 1.605635e-49 | -8.615850e-47 |
| Msa1002480 | Msa1359040 | 0.805009 | 1.641566e-49 | -8.615850e-47 |
| Msa1002480 | Msa1371580 | 0.815941 | 7.142975e-52 | -8.615850e-47 |
| Msa1002480 | Msa1372580 | 0.817259 | 3.617626e-52 | -8.615850e-47 |
| Msa1002480 | Msa1378230 | 0.815382 | 9.513340e-52 | -8.615850e-47 |
| Msa1002480 | Msa1379710 | 0.820901 | 5.367575e-53 | -8.615850e-47 |
| Msa1002480 | Msa1382930 | 0.972584 | 5.259378e-135 | -8.615850e-47 |
| Msa1002480 | Msa1384350 | 0.820814 | 5.620808e-53 | -8.615850e-47 |
| Msa1002480 | Msa1385670 | 0.820817 | 5.612092e-53 | -8.615850e-47 |
| Msa1002480 | Msa1389830 | 0.808483 | 3.029528e-50 | -8.615850e-47 |
| Msa1002480 | Msa1390050 | 0.804139 | 2.493169e-49 | -8.615850e-47 |
| Msa1002480 | Msa1392260 | 0.837660 | 4.558829e-57 | -8.615850e-47 |
| Msa1002480 | Msa1393040 | 0.822329 | 2.511438e-53 | -8.615850e-47 |
| Msa1002480 | Msa1397120 | 0.803965 | 2.709658e-49 | -8.615850e-47 |
| Msa1002480 | Msa1401290 | 0.822708 | 2.049928e-53 | -8.615850e-47 |
| Msa1002480 | Msa1403890 | 0.810440 | 1.151449e-50 | -8.615850e-47 |
| Msa1002480 | Msa1404540 | 0.804643 | 1.957476e-49 | -8.615850e-47 |
| Msa1002480 | Msa1407600 | 0.807203 | 5.669628e-50 | -8.615850e-47 |
| Msa1002480 | Msa1410470 | 0.808095 | 3.665343e-50 | -8.615850e-47 |
| Msa1002480 | Msa1417200 | 0.800254 | 1.571358e-48 | -8.615850e-47 |
| Msa1002480 | Msa1420140 | 0.801317 | 9.533543e-49 | -8.615850e-47 |
| Msa1002480 | Msa1423450 | 0.819596 | 1.068711e-52 | -8.615850e-47 |
| Msa1002480 | Msa1424450 | 0.815673 | 8.193265e-52 | -8.615850e-47 |
| Msa1002480 | Msa1425010 | 0.859222 | 4.801686e-63 | -8.615850e-47 |
| Msa1002480 | Msa1425100 | 0.808890 | 2.480145e-50 | -8.615850e-47 |
| Msa1002480 | Msa1427830 | 0.808325 | 3.273584e-50 | -8.615850e-47 |
| Msa1002480 | Msa1429900 | 0.843686 | 1.202762e-58 | -8.615850e-47 |
| Msa1002480 | Msa1435370 | 0.846541 | 2.035873e-59 | -8.615850e-47 |
| Msa1002480 | Msa1437680 | 0.859271 | 4.641952e-63 | -8.615850e-47 |
| Msa1002480 | Msa1438910 | 0.970473 | 1.139412e-131 | -8.615850e-47 |
| Msa1002480 | Msa1440000 | 0.825061 | 5.756815e-54 | -8.615850e-47 |
| Msa1002480 | Msa1440600 | 0.800954 | 1.131056e-48 | -8.615850e-47 |
| Msa1002480 | Msa1440910 | 0.853300 | 2.617762e-61 | -8.615850e-47 |
| Msa1002480 | Msa1441190 | 0.803894 | 2.803787e-49 | -8.615850e-47 |
| Msa1002480 | Msa1444250 | -0.805980 | 1.027099e-49 | -8.615850e-47 |
| Msa1002480 | Msa1444740 | 0.817825 | 2.697627e-52 | -8.615850e-47 |
| Msa1002480 | Msa1445030 | 0.816875 | 4.414514e-52 | -8.615850e-47 |
| Msa1002480 | Msa1449820 | 0.805117 | 1.558495e-49 | -8.615850e-47 |
| Msa1002480 | Msa1451620 | -0.808784 | 2.612895e-50 | -8.615850e-47 |
| Msa1002480 | Msa1454110 | 0.805092 | 1.577573e-49 | -8.615850e-47 |
| Msa1002480 | Msa1454120 | 0.818769 | 1.649040e-52 | -8.615850e-47 |
| Msa1002480 | Msa1454860 | 0.805175 | 1.515225e-49 | -8.615850e-47 |
| Msa1002480 | Msa1462840 | 0.819334 | 1.226502e-52 | -8.615850e-47 |
| Msa1002480 | Msa1463670 | 0.802339 | 5.879423e-49 | -8.615850e-47 |
| Msa1002480 | Msa1464940 | 0.817526 | 3.151087e-52 | -8.615850e-47 |
| Msa1002480 | Msa1466730 | 0.821926 | 3.114537e-53 | -8.615850e-47 |
| Msa0243710 | Msa1002480 | 0.805600 | 1.234202e-49 | -8.615850e-47 |
| Msa0245940 | Msa1002480 | 0.810669 | 1.027469e-50 | -8.615850e-47 |
| Msa0246430 | Msa1002480 | 0.801361 | 9.336728e-49 | -8.615850e-47 |
| Msa0248980 | Msa1002480 | 0.809895 | 1.509540e-50 | -8.615850e-47 |
| Msa0249100 | Msa1002480 | 0.818138 | 2.291819e-52 | -8.615850e-47 |
| Msa0250410 | Msa1002480 | 0.808962 | 2.393240e-50 | -8.615850e-47 |
| Msa0260810 | Msa1002480 | 0.807318 | 5.358854e-50 | -8.615850e-47 |
| Msa0264930 | Msa1002480 | 0.811005 | 8.689478e-51 | -8.615850e-47 |
| Msa0267310 | Msa1002480 | 0.810698 | 1.012560e-50 | -8.615850e-47 |
| Msa0269450 | Msa1002480 | 0.835639 | 1.492297e-56 | -8.615850e-47 |
| Msa0270100 | Msa1002480 | 0.839445 | 1.578046e-57 | -8.615850e-47 |
| Msa0270270 | Msa1002480 | 0.813289 | 2.759364e-51 | -8.615850e-47 |
| Msa0282250 | Msa1002480 | 0.838218 | 3.277763e-57 | -8.615850e-47 |
| Msa0284520 | Msa1002480 | 0.802683 | 4.994513e-49 | -8.615850e-47 |
| Msa0287410 | Msa1002480 | 0.815813 | 7.626945e-52 | -8.615850e-47 |
| Msa0299580 | Msa1002480 | 0.841627 | 4.236078e-58 | -8.615850e-47 |
| Msa0304290 | Msa1002480 | 0.802546 | 5.329411e-49 | -8.615850e-47 |
| Msa0304330 | Msa1002480 | 0.803729 | 3.033970e-49 | -8.615850e-47 |
| Msa0307950 | Msa1002480 | 0.813324 | 2.710882e-51 | -8.615850e-47 |
| Msa0309550 | Msa1002480 | 0.823882 | 1.090144e-53 | -8.615850e-47 |
| Msa0323180 | Msa1002480 | 0.827198 | 1.786193e-54 | -8.615850e-47 |
| Msa0326110 | Msa1002480 | 0.819927 | 8.981536e-53 | -8.615850e-47 |
| Msa0334360 | Msa1002480 | 0.807580 | 4.716902e-50 | -8.615850e-47 |
| Msa0335040 | Msa1002480 | 0.803324 | 3.681259e-49 | -8.615850e-47 |
| Msa0336420 | Msa1002480 | 0.800737 | 1.252548e-48 | -8.615850e-47 |
| Msa0337060 | Msa1002480 | 0.806016 | 1.009517e-49 | -8.615850e-47 |
| Msa0338110 | Msa1002480 | 0.811779 | 5.902395e-51 | -8.615850e-47 |
| Msa0344910 | Msa1002480 | 0.810227 | 1.279739e-50 | -8.615850e-47 |
| Msa0344980 | Msa1002480 | 0.809322 | 2.003439e-50 | -8.615850e-47 |
| Msa0351810 | Msa1002480 | 0.804384 | 2.216789e-49 | -8.615850e-47 |
| Msa0484780 | Msa1002480 | 0.850147 | 2.048693e-60 | -8.615850e-47 |
| Msa0485120 | Msa1002480 | 0.821142 | 4.726007e-53 | -8.615850e-47 |
| Msa0485500 | Msa1002480 | -0.801892 | 7.264399e-49 | -8.615850e-47 |
| Msa0489030 | Msa1002480 | 0.807086 | 6.003056e-50 | -8.615850e-47 |
| Msa0489100 | Msa1002480 | 0.800981 | 1.116928e-48 | -8.615850e-47 |
| Msa0493630 | Msa1002480 | 0.814696 | 1.350638e-51 | -8.615850e-47 |
| Msa0501450 | Msa1002480 | 0.802442 | 5.598816e-49 | -8.615850e-47 |
| Msa0502100 | Msa1002480 | 0.833005 | 6.835292e-56 | -8.615850e-47 |
| Msa0511720 | Msa1002480 | -0.826935 | 2.064217e-54 | -8.615850e-47 |
| Msa0512900 | Msa1002480 | 0.807594 | 4.684376e-50 | -8.615850e-47 |
| Msa0516370 | Msa1002480 | 0.810291 | 1.239878e-50 | -8.615850e-47 |
| Msa0521430 | Msa1002480 | 0.810475 | 1.131560e-50 | -8.615850e-47 |
| Msa0523460 | Msa1002480 | 0.810575 | 1.076740e-50 | -8.615850e-47 |
| Msa0527250 | Msa1002480 | 0.815987 | 6.974656e-52 | -8.615850e-47 |
| Msa0532710 | Msa1002480 | 0.821684 | 3.541444e-53 | -8.615850e-47 |
| Msa0536220 | Msa1002480 | 0.803060 | 4.174659e-49 | -8.615850e-47 |
| Msa0543900 | Msa1002480 | 0.808657 | 2.781258e-50 | -8.615850e-47 |
| Msa0545070 | Msa1002480 | 0.803416 | 3.522591e-49 | -8.615850e-47 |
| Msa0553460 | Msa1002480 | 0.838113 | 3.487746e-57 | -8.615850e-47 |
| Msa0558690 | Msa1002480 | 0.819093 | 1.391559e-52 | -8.615850e-47 |
| Msa0561230 | Msa1002480 | 0.850811 | 1.333406e-60 | -8.615850e-47 |
| Msa0575470 | Msa1002480 | 0.868193 | 7.832143e-66 | -8.615850e-47 |
| Msa0577220 | Msa1002480 | 0.805153 | 1.531399e-49 | -8.615850e-47 |
| Msa0578970 | Msa1002480 | 0.805896 | 1.069929e-49 | -8.615850e-47 |
| Msa0579130 | Msa1002480 | 0.822075 | 2.876372e-53 | -8.615850e-47 |
| Msa0580420 | Msa1002480 | 0.807020 | 6.196965e-50 | -8.615850e-47 |
| Msa0599580 | Msa1002480 | 0.835519 | 1.600617e-56 | -8.615850e-47 |
| Msa0599770 | Msa1002480 | 0.816057 | 6.728790e-52 | -8.615850e-47 |
| Msa0599890 | Msa1002480 | 0.810609 | 1.058467e-50 | -8.615850e-47 |
| Msa0844900 | Msa1002480 | 0.810525 | 1.103768e-50 | -8.615850e-47 |
| Msa0848900 | Msa1002480 | 0.830366 | 3.058247e-55 | -8.615850e-47 |
| Msa0869120 | Msa1002480 | 0.836835 | 7.411946e-57 | -8.615850e-47 |
| Msa0877410 | Msa1002480 | 0.847975 | 8.230029e-60 | -8.615850e-47 |
| Msa0881020 | Msa1002480 | 0.808330 | 3.266362e-50 | -8.615850e-47 |
| Msa0882510 | Msa1002480 | 0.805320 | 1.413065e-49 | -8.615850e-47 |
| Msa0896750 | Msa1002480 | 0.819642 | 1.043273e-52 | -8.615850e-47 |
| Msa0897080 | Msa1002480 | 0.803518 | 3.354649e-49 | -8.615850e-47 |
| Msa0899230 | Msa1002480 | 0.831333 | 1.771728e-55 | -8.615850e-47 |
| Msa0908170 | Msa1002480 | 0.823954 | 1.048550e-53 | -8.615850e-47 |
| Msa0910980 | Msa1002480 | -0.826297 | 2.930473e-54 | -8.615850e-47 |
| Msa0923330 | Msa1002480 | 0.813565 | 2.400488e-51 | -8.615850e-47 |
| Msa0927670 | Msa1002480 | 0.845297 | 4.434301e-59 | -8.615850e-47 |
| Msa0930140 | Msa1002480 | 0.804381 | 2.219856e-49 | -8.615850e-47 |
| Msa0933230 | Msa1002480 | 0.824217 | 9.099294e-54 | -8.615850e-47 |
| Msa0933310 | Msa1002480 | 0.825016 | 5.897060e-54 | -8.615850e-47 |
| Msa0942070 | Msa1002480 | 0.802918 | 4.465382e-49 | -8.615850e-47 |
| Msa0944550 | Msa1002480 | 0.828022 | 1.132446e-54 | -8.615850e-47 |
| Msa0944770 | Msa1002480 | 0.815834 | 7.543650e-52 | -8.615850e-47 |
| Msa0952020 | Msa1002480 | 0.811433 | 7.017915e-51 | -8.615850e-47 |
| Msa0958920 | Msa1002480 | 0.812516 | 4.076091e-51 | -8.615850e-47 |
| Msa0960160 | Msa1002480 | 0.835808 | 1.352503e-56 | -8.615850e-47 |
| Msa0961420 | Msa1002480 | -0.804544 | 2.052689e-49 | -8.615850e-47 |
| Msa0962770 | Msa1002480 | 0.812755 | 3.613930e-51 | -8.615850e-47 |
| Msa0965520 | Msa1002480 | 0.813879 | 2.047071e-51 | -8.615850e-47 |
| Msa0971090 | Msa1002480 | 0.821945 | 3.082120e-53 | -8.615850e-47 |
| Msa0979100 | Msa1002480 | 0.801738 | 7.816396e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002480 | MtrunA17_Chr7g0275251 | 92.705 | 562 | 36 | 1 | 1 | 562 | 1 | 557 | 0.0 | 990 |
| Msa1002480 | MtrunA17_Chr8g0347871 | 42.061 | 592 | 251 | 16 | 15 | 561 | 14 | 558 | 3.62e-119 | 363 |
| Msa1002480 | MtrunA17_Chr5g0397031 | 41.873 | 363 | 145 | 8 | 54 | 358 | 60 | 414 | 6.48e-74 | 248 |
| Msa1002480 | MtrunA17_Chr7g0266861 | 27.488 | 422 | 201 | 14 | 22 | 357 | 36 | 438 | 3.50e-25 | 110 |
| Msa1002480 | MtrunA17_Chr3g0098801 | 26.996 | 263 | 178 | 6 | 135 | 396 | 199 | 448 | 4.55e-22 | 100 |
| Msa1002480 | MtrunA17_Chr5g0444041 | 29.130 | 230 | 149 | 3 | 129 | 358 | 188 | 403 | 5.63e-22 | 100 |
| Msa1002480 | MtrunA17_Chr4g0026051 | 25.879 | 398 | 222 | 12 | 22 | 356 | 48 | 435 | 8.33e-19 | 90.1 |
| Msa1002480 | MtrunA17_Chr2g0321731 | 26.766 | 269 | 183 | 5 | 116 | 379 | 205 | 464 | 3.30e-17 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1002480 | AT5G41620.1 | 36.603 | 418 | 168 | 8 | 16 | 358 | 17 | 412 | 4.99e-68 | 231 |
| Msa1002480 | AT5G41620.4 | 42.857 | 294 | 137 | 3 | 92 | 358 | 6 | 295 | 6.63e-64 | 218 |
| Msa1002480 | AT5G41620.3 | 42.857 | 294 | 137 | 3 | 92 | 358 | 6 | 295 | 6.63e-64 | 218 |
| Msa1002480 | AT1G64180.1 | 31.250 | 560 | 285 | 15 | 62 | 554 | 61 | 587 | 6.51e-58 | 204 |
| Msa1002480 | AT5G41620.2 | 46.847 | 222 | 112 | 2 | 139 | 358 | 36 | 253 | 2.57e-54 | 191 |
| Msa1002480 | AT2G46250.1 | 35.207 | 338 | 157 | 7 | 27 | 329 | 20 | 330 | 8.05e-41 | 154 |
| Msa1002480 | AT3G11590.1 | 29.647 | 425 | 206 | 11 | 13 | 357 | 35 | 446 | 5.54e-35 | 139 |
| Msa1002480 | AT2G46250.2 | 40.580 | 207 | 102 | 2 | 123 | 329 | 54 | 239 | 7.99e-33 | 130 |
| Msa1002480 | AT3G11590.2 | 33.790 | 219 | 141 | 2 | 139 | 357 | 70 | 284 | 4.34e-27 | 114 |
| Msa1002480 | AT1G50660.1 | 27.574 | 272 | 173 | 8 | 129 | 396 | 212 | 463 | 3.38e-25 | 110 |
| Msa1002480 | AT3G20350.1 | 24.852 | 338 | 217 | 10 | 75 | 396 | 140 | 456 | 3.52e-24 | 107 |
Find 108 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCCTTGACTTCTTTAA+TGG | 0.167681 | 6_4:-88220517 | None:intergenic |
| GGTGGAAAAGTTGAAACTTT+TGG | 0.234292 | 6_4:+88218573 | Msa1002480:CDS |
| AGTAAAAGACAATACATTTA+TGG | 0.302608 | 6_4:+88221013 | Msa1002480:CDS |
| TTCATAATCTCTTACTCCTT+TGG | 0.317548 | 6_4:-88220247 | None:intergenic |
| TCACCCTTGCCTACCTTCAT+TGG | 0.324543 | 6_4:+88220539 | Msa1002480:CDS |
| GCGGATAAGGATCGCATTAA+TGG | 0.328056 | 6_4:+88220300 | Msa1002480:CDS |
| GAGGGGAAATCAAGTGAAAT+TGG | 0.348447 | 6_4:+88220684 | Msa1002480:CDS |
| CCATTCTGCAGTTACAGTTA+AGG | 0.372039 | 6_4:+88220908 | Msa1002480:CDS |
| TCAAAATTTCAAGTTGAAGA+TGG | 0.377914 | 6_4:+88218507 | Msa1002480:exon |
| ATTGAGCTAAGGCAATTAGA+AGG | 0.381758 | 6_4:-88219492 | None:intergenic |
| TTCTAATTGCCTTAGCTCAA+TGG | 0.385938 | 6_4:+88219494 | Msa1002480:CDS |
| CACTAGCCAGCTTCTGATAC+AGG | 0.387417 | 6_4:-88220125 | None:intergenic |
| TACTTCACATTTCAGAGGCT+TGG | 0.392687 | 6_4:+88220343 | Msa1002480:CDS |
| ATTGGATTCCTTTCAACTAA+AGG | 0.395468 | 6_4:+88220557 | Msa1002480:CDS |
| ACTGCTTGAAGCAAGGTTAG+AGG | 0.396153 | 6_4:+88221040 | Msa1002480:CDS |
| GAAAATGAATAAGCAGGAAA+TGG | 0.398382 | 6_4:+88219969 | Msa1002480:CDS |
| CATTCTGCAGTTACAGTTAA+GGG | 0.406187 | 6_4:+88220909 | Msa1002480:CDS |
| TTGGAGAAGAGAGGAGGAAG+AGG | 0.410484 | 6_4:+88218592 | Msa1002480:CDS |
| AGACTGAGACATGTTGAAAT+CGG | 0.412710 | 6_4:-88220970 | None:intergenic |
| GAAAAGGGAAGAAGGAATAA+TGG | 0.415845 | 6_4:+88218552 | Msa1002480:CDS |
| TGTTTCCAACTAACTGTTCA+AGG | 0.418652 | 6_4:-88220821 | None:intergenic |
| TATGCATAATAGTGCGGATA+AGG | 0.427280 | 6_4:+88220287 | Msa1002480:CDS |
| CACAGCCTTGAACAGTTAGT+TGG | 0.447691 | 6_4:+88220816 | Msa1002480:CDS |
| TAGCCGGCGTCTTGAAGAAC+AGG | 0.450663 | 6_4:+88219861 | Msa1002480:CDS |
| ATGTGATTCTATTCTACAAA+AGG | 0.451168 | 6_4:-88221153 | None:intergenic |
| TATATCCTGAGAGTATTTGC+AGG | 0.458388 | 6_4:+88220871 | Msa1002480:CDS |
| CTTAACAAGTGCTTTGTTGA+GGG | 0.464066 | 6_4:+88220666 | Msa1002480:CDS |
| CCAACAAGTTTGAACAGAAA+AGG | 0.465731 | 6_4:+88220628 | Msa1002480:CDS |
| TATTGTCTCCTTTAGTTGAA+AGG | 0.466986 | 6_4:-88220565 | None:intergenic |
| ATCAGTCGACAGAAATTGTT+CGG | 0.469683 | 6_4:+88219452 | Msa1002480:CDS |
| TTTGTCATCAGAAGGTGATA+AGG | 0.472314 | 6_4:+88220848 | Msa1002480:CDS |
| TATGAGGAGGCTCATGGTGG+TGG | 0.473227 | 6_4:-88218756 | None:intergenic |
| GAAATCTCTGTGCTAAACTC+TGG | 0.476454 | 6_4:+88218722 | Msa1002480:CDS |
| AACTCTTGTTGATGAGAAGA+AGG | 0.480434 | 6_4:-88218664 | None:intergenic |
| GTGACATGAATTAATTCCCT+TGG | 0.485875 | 6_4:-88220796 | None:intergenic |
| AGAAAAGAAAATGAATAAGC+AGG | 0.487246 | 6_4:+88219963 | Msa1002480:CDS |
| TTAATGGTGATAGCCTTGAT+AGG | 0.491514 | 6_4:+88220316 | Msa1002480:CDS |
| TACTTACTTCCATTGAGCTA+AGG | 0.494927 | 6_4:-88219503 | None:intergenic |
| GAGAACCTTGACTAACTCTC+TGG | 0.496123 | 6_4:-88219833 | None:intergenic |
| AAAGTCCACCAGAAAATGAT+AGG | 0.498720 | 6_4:+88220766 | Msa1002480:CDS |
| CCTTGACTTCTTTAATGGAG+GGG | 0.499105 | 6_4:-88220512 | None:intergenic |
| TCCTTGACTTCTTTAATGGA+GGG | 0.499288 | 6_4:-88220513 | None:intergenic |
| AGGAAGAGATTGAAGATGAA+AGG | 0.499321 | 6_4:+88220079 | Msa1002480:CDS |
| CTCGAGTCTCTAGCAGATGC+TGG | 0.502686 | 6_4:-88219393 | None:intergenic |
| AAGCAAGTTCAAGATGGTAT+TGG | 0.504529 | 6_4:+88220387 | Msa1002480:CDS |
| GTCTACTAACAAATTGCCTA+GGG | 0.505083 | 6_4:+88220989 | Msa1002480:CDS |
| AGAAGAGAGGAGGAAGAGGA+AGG | 0.512890 | 6_4:+88218596 | Msa1002480:CDS |
| TTCCTTGACTTCTTTAATGG+AGG | 0.515224 | 6_4:-88220514 | None:intergenic |
| GACTGAGACATGTTGAAATC+GGG | 0.515513 | 6_4:-88220969 | None:intergenic |
| CATCACACAAATTCTCCAAA+AGG | 0.518761 | 6_4:-88220218 | None:intergenic |
| AGAAAGCCTGTATCAGAAGC+TGG | 0.520623 | 6_4:+88220119 | Msa1002480:CDS |
| CACCAGAAAATGATAGGTGC+AGG | 0.525944 | 6_4:+88220772 | Msa1002480:CDS |
| CCCCTCCATTAAAGAAGTCA+AGG | 0.526840 | 6_4:+88220512 | Msa1002480:CDS |
| AGTTGAAAGGAATCCAATGA+AGG | 0.527897 | 6_4:-88220552 | None:intergenic |
| TTCAAACTTGTTGGTACCAA+CGG | 0.528206 | 6_4:-88220619 | None:intergenic |
| CAACTATTGAATGTGTCTCT+AGG | 0.530200 | 6_4:-88220419 | None:intergenic |
| TGTGAAGTATTAGCCTATCA+AGG | 0.530785 | 6_4:-88220329 | None:intergenic |
| AACAGTTCTTTGTCATCAGA+AGG | 0.531010 | 6_4:+88220840 | Msa1002480:CDS |
| AGTCTACTAACAAATTGCCT+AGG | 0.531127 | 6_4:+88220988 | Msa1002480:CDS |
| AATAGTGAAAGCTCTGATAG+TGG | 0.535399 | 6_4:+88219900 | Msa1002480:CDS |
| GCTTCCTCGGCAAAATTATG+AGG | 0.538410 | 6_4:-88220594 | None:intergenic |
| GGTACCAACGGAAGCTTCCT+CGG | 0.539258 | 6_4:-88220607 | None:intergenic |
| TGTATGGAGAAAAGGGAAGA+AGG | 0.539368 | 6_4:+88218544 | Msa1002480:CDS |
| CCTTAACTGTAACTGCAGAA+TGG | 0.540574 | 6_4:-88220908 | None:intergenic |
| TCTTCCCTGCAAATACTCTC+AGG | 0.540737 | 6_4:-88220876 | None:intergenic |
| AAATCTCTGTGCTAAACTCT+GGG | 0.540999 | 6_4:+88218723 | Msa1002480:CDS |
| ACTTAACAAGTGCTTTGTTG+AGG | 0.542539 | 6_4:+88220665 | Msa1002480:CDS |
| GTTCAACACCACCACCCACT+TGG | 0.555840 | 6_4:+88218626 | Msa1002480:CDS |
| TTGAGCTAAGGCAATTAGAA+GGG | 0.559447 | 6_4:-88219491 | None:intergenic |
| TTAACAAGTGCTTTGTTGAG+GGG | 0.561075 | 6_4:+88220667 | Msa1002480:CDS |
| TGGCAAAACTGCTTGAAGCA+AGG | 0.561650 | 6_4:+88221033 | Msa1002480:CDS |
| ACAAGTCTCCAAGTGGGTGG+TGG | 0.563442 | 6_4:-88218634 | None:intergenic |
| TCACACAAAGTTGATTCTCT+AGG | 0.566264 | 6_4:-88220735 | None:intergenic |
| ACTAGATCTTTCTCAAACAC+AGG | 0.567197 | 6_4:+88219924 | Msa1002480:CDS |
| TCAAGGTTCTCAAACGTAGC+CGG | 0.567882 | 6_4:+88219845 | Msa1002480:CDS |
| GCTAATACTTCACATTTCAG+AGG | 0.570361 | 6_4:+88220338 | Msa1002480:CDS |
| TCATAGTAGTCCCTCTCACC+AGG | 0.572281 | 6_4:+88218780 | Msa1002480:CDS |
| CAAATGAAGCAAGTTCAAGA+TGG | 0.575876 | 6_4:+88220381 | Msa1002480:CDS |
| AAATGATAGGTGCAGGACCA+AGG | 0.580181 | 6_4:+88220779 | Msa1002480:CDS |
| GAGGGACTACTATGACTATG+AGG | 0.581362 | 6_4:-88218772 | None:intergenic |
| GAATCCAATGAAGGTAGGCA+AGG | 0.585447 | 6_4:-88220543 | None:intergenic |
| TCTTTCTTCTTGTTGACACA+CGG | 0.589452 | 6_4:+88218432 | None:intergenic |
| AAGAGATTGAAGATGAAAGG+AGG | 0.590101 | 6_4:+88220082 | Msa1002480:CDS |
| AGCTGTAGTTCAATCAGTCA+AGG | 0.591551 | 6_4:+88220059 | Msa1002480:CDS |
| AATGATAGGTGCAGGACCAA+GGG | 0.594126 | 6_4:+88220780 | Msa1002480:CDS |
| TATGACTATGAGGAGGCTCA+TGG | 0.595092 | 6_4:-88218762 | None:intergenic |
| ATGAGGAGGCTCATGGTGGT+GGG | 0.595906 | 6_4:-88218755 | None:intergenic |
| AAGAAAAGTACCTGGTGAGA+GGG | 0.598007 | 6_4:-88218790 | None:intergenic |
| CAAGAAAAGTACCTGGTGAG+AGG | 0.598348 | 6_4:-88218791 | None:intergenic |
| GGAAATCAAGTGAAATTGGA+AGG | 0.599065 | 6_4:+88220688 | Msa1002480:CDS |
| TTCTATTATGCATAATAGTG+CGG | 0.602383 | 6_4:+88220281 | Msa1002480:CDS |
| TTTGCCGAGGAAGCTTCCGT+TGG | 0.615175 | 6_4:+88220603 | Msa1002480:CDS |
| GAAAGGAATCCAATGAAGGT+AGG | 0.616541 | 6_4:-88220548 | None:intergenic |
| AAGGGAAGAAGGAATAATGG+TGG | 0.618908 | 6_4:+88218555 | Msa1002480:CDS |
| CAAGCATCAGTTGTTCAGCA+CGG | 0.633336 | 6_4:+88219426 | Msa1002480:CDS |
| GTCATCCAGAGAGTTAGTCA+AGG | 0.646355 | 6_4:+88219828 | Msa1002480:CDS |
| TGAGCTAAGGCAATTAGAAG+GGG | 0.649817 | 6_4:-88219490 | None:intergenic |
| ATATCCTGAGAGTATTTGCA+GGG | 0.650780 | 6_4:+88220872 | Msa1002480:CDS |
| AATCCAATGAAGGTAGGCAA+GGG | 0.653423 | 6_4:-88220542 | None:intergenic |
| GAAGTGAAGTCTTTGTTACG+TGG | 0.664790 | 6_4:+88220156 | Msa1002480:CDS |
| TCAACAAGTCTCCAAGTGGG+TGG | 0.665483 | 6_4:-88218637 | None:intergenic |
| AAAGTCAACAAGTCTCCAAG+TGG | 0.666077 | 6_4:-88218641 | None:intergenic |
| AAGTCAACAAGTCTCCAAGT+GGG | 0.688185 | 6_4:-88218640 | None:intergenic |
| GGACTACTATGACTATGAGG+AGG | 0.700817 | 6_4:-88218769 | None:intergenic |
| GACTATGAGGAGGCTCATGG+TGG | 0.712982 | 6_4:-88218759 | None:intergenic |
| CATCCTGTTCTTCAAGACGC+CGG | 0.714018 | 6_4:-88219864 | None:intergenic |
| GTTTGAACAGAAAAGGACTG+CGG | 0.744270 | 6_4:+88220635 | Msa1002480:CDS |
| TCTACTAACAAATTGCCTAG+GGG | 0.750446 | 6_4:+88220990 | Msa1002480:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTAATGACATTTT+TGG | + | chr6_4:88218837-88218856 | Msa1002480:intron | 10.0% |
| !! | AGAATGAAATAAATTTGAAT+AGG | + | chr6_4:88219135-88219154 | Msa1002480:intron | 15.0% |
| !!! | TCTTTTTGATTAAATTCTAA+GGG | + | chr6_4:88221095-88221114 | Msa1002480:exon | 15.0% |
| !! | AAACAGAAATTACCAATTAT+AGG | - | chr6_4:88218924-88218943 | None:intergenic | 20.0% |
| !! | AGTTCTATATATCAATTAAG+AGG | + | chr6_4:88218979-88218998 | Msa1002480:intron | 20.0% |
| !! | GTTCTATATATCAATTAAGA+GGG | + | chr6_4:88218980-88218999 | Msa1002480:intron | 20.0% |
| !! | ATTCTTTAACATCAACATTA+GGG | - | chr6_4:88219120-88219139 | None:intergenic | 20.0% |
| !!! | TGTGTTATTTTTTGTAAAAC+AGG | + | chr6_4:88219795-88219814 | Msa1002480:intron | 20.0% |
| !! | AGTAAAAGACAATACATTTA+TGG | + | chr6_4:88221013-88221032 | Msa1002480:CDS | 20.0% |
| !!! | CTCTTTTTGATTAAATTCTA+AGG | + | chr6_4:88221094-88221113 | Msa1002480:exon | 20.0% |
| !!! | CTTTTTGATTAAATTCTAAG+GGG | + | chr6_4:88221096-88221115 | Msa1002480:exon | 20.0% |
| !!! | AATCACATTGTAATTTTACA+TGG | + | chr6_4:88221168-88221187 | Msa1002480:three_prime_UTR | 20.0% |
| !!! | TCAAAATTTCAAGTTGAAGA+TGG | + | chr6_4:88218507-88218526 | Msa1002480:exon | 25.0% |
| ! | AGAAAAATGTATGGAGAAAA+GGG | + | chr6_4:88218537-88218556 | Msa1002480:CDS | 25.0% |
| ! | CATTCTTTAACATCAACATT+AGG | - | chr6_4:88219121-88219140 | None:intergenic | 25.0% |
| ! | AAAGGAAGAACACAATTATA+TGG | - | chr6_4:88219228-88219247 | None:intergenic | 25.0% |
| ! | AAACATTAATTCCTAAAGTC+AGG | + | chr6_4:88219274-88219293 | Msa1002480:intron | 25.0% |
| !!! | ATATTTTGAATTTCAACTGC+TGG | + | chr6_4:88219346-88219365 | Msa1002480:intron | 25.0% |
| ! | TAAACTTCTTGAGATTCAAA+TGG | - | chr6_4:88219542-88219561 | None:intergenic | 25.0% |
| !! | GAAGCATTAAAATTGATTAG+AGG | + | chr6_4:88219640-88219659 | Msa1002480:intron | 25.0% |
| !! | AAAAGTGTATGTAAACTAGA+TGG | + | chr6_4:88219725-88219744 | Msa1002480:intron | 25.0% |
| !! | ACACATTCATCTTTTTATAC+CGG | - | chr6_4:88219780-88219799 | None:intergenic | 25.0% |
| ! | AGAAAAGAAAATGAATAAGC+AGG | + | chr6_4:88219963-88219982 | Msa1002480:CDS | 25.0% |
| ! | TCGAAAGAGAAAAAAAAGAA+AGG | + | chr6_4:88220193-88220212 | Msa1002480:CDS | 25.0% |
| !! | AAAAAAAGAAAGGATCCTTT+TGG | + | chr6_4:88220203-88220222 | Msa1002480:CDS | 25.0% |
| ! | TTCTATTATGCATAATAGTG+CGG | + | chr6_4:88220281-88220300 | Msa1002480:CDS | 25.0% |
| ! | AATTTCCTTGACTTCTTTAA+TGG | - | chr6_4:88220520-88220539 | None:intergenic | 25.0% |
| !! | AATCAAAAAGAGCTTTTACT+AGG | - | chr6_4:88221086-88221105 | None:intergenic | 25.0% |
| ! | ATGTGATTCTATTCTACAAA+AGG | - | chr6_4:88221156-88221175 | None:intergenic | 25.0% |
| !! | TGTAATTTTACATGGTTAGA+TGG | + | chr6_4:88221176-88221195 | Msa1002480:three_prime_UTR | 25.0% |
| GGAAAGAAGAGAAAAATGTA+TGG | + | chr6_4:88218528-88218547 | Msa1002480:CDS | 30.0% | |
| GAGAAAAATGTATGGAGAAA+AGG | + | chr6_4:88218536-88218555 | Msa1002480:CDS | 30.0% | |
| !! | TACAAAACAAGAAAAGTACC+TGG | - | chr6_4:88218801-88218820 | None:intergenic | 30.0% |
| ! | TGTTTTCAGATGCCTATAAT+TGG | + | chr6_4:88218909-88218928 | Msa1002480:intron | 30.0% |
| !! | TCTGTTTCAGCTTTAAAAGT+TGG | + | chr6_4:88218937-88218956 | Msa1002480:intron | 30.0% |
| ATTCCTCTGATGAAAAATCA+AGG | - | chr6_4:88219068-88219087 | None:intergenic | 30.0% | |
| TAGGGATAGTTAATTCGAAA+AGG | - | chr6_4:88219102-88219121 | None:intergenic | 30.0% | |
| GAACACAATTATATGGACAT+TGG | - | chr6_4:88219221-88219240 | None:intergenic | 30.0% | |
| AGTCTTTCAGCTATCAATAA+AGG | - | chr6_4:88219246-88219265 | None:intergenic | 30.0% | |
| TCAAACATAATCCTGACTTT+AGG | - | chr6_4:88219288-88219307 | None:intergenic | 30.0% | |
| TTCATTAAAAATGCCTCAGA+AGG | - | chr6_4:88219698-88219717 | None:intergenic | 30.0% | |
| !! | TCTGAGGCATTTTTAATGAA+TGG | + | chr6_4:88219698-88219717 | Msa1002480:intron | 30.0% |
| ! | TCTTTTTATACCGGATGAAA+GGG | - | chr6_4:88219771-88219790 | None:intergenic | 30.0% |
| ! | ATCTTTTTATACCGGATGAA+AGG | - | chr6_4:88219772-88219791 | None:intergenic | 30.0% |
| GAAAATGAATAAGCAGGAAA+TGG | + | chr6_4:88219969-88219988 | Msa1002480:CDS | 30.0% | |
| TTCATAATCTCTTACTCCTT+TGG | - | chr6_4:88220250-88220269 | None:intergenic | 30.0% | |
| ATTGGATTCCTTTCAACTAA+AGG | + | chr6_4:88220557-88220576 | Msa1002480:CDS | 30.0% | |
| TATTGTCTCCTTTAGTTGAA+AGG | - | chr6_4:88220568-88220587 | None:intergenic | 30.0% | |
| !!! | GTTTTTTTCGACTGTTTAAC+AGG | - | chr6_4:88220939-88220958 | None:intergenic | 30.0% |
| GAAAAGGGAAGAAGGAATAA+TGG | + | chr6_4:88218552-88218571 | Msa1002480:CDS | 35.0% | |
| ! | GGTGGAAAAGTTGAAACTTT+TGG | + | chr6_4:88218573-88218592 | Msa1002480:CDS | 35.0% |
| !! | TTGAAACTTTTGGAGAAGAG+AGG | + | chr6_4:88218583-88218602 | Msa1002480:CDS | 35.0% |
| ! | AACTCTTGTTGATGAGAAGA+AGG | - | chr6_4:88218667-88218686 | None:intergenic | 35.0% |
| AAATCTCTGTGCTAAACTCT+GGG | + | chr6_4:88218723-88218742 | Msa1002480:CDS | 35.0% | |
| !! | GCTTTAAAAGTTGGTGACTT+TGG | + | chr6_4:88218946-88218965 | Msa1002480:intron | 35.0% |
| !! | AAAAGTTGGTGACTTTGGTT+TGG | + | chr6_4:88218951-88218970 | Msa1002480:intron | 35.0% |
| ATCAGTCGACAGAAATTGTT+CGG | + | chr6_4:88219452-88219471 | Msa1002480:CDS | 35.0% | |
| TTGAGCTAAGGCAATTAGAA+GGG | - | chr6_4:88219494-88219513 | None:intergenic | 35.0% | |
| ATTGAGCTAAGGCAATTAGA+AGG | - | chr6_4:88219495-88219514 | None:intergenic | 35.0% | |
| TTCTAATTGCCTTAGCTCAA+TGG | + | chr6_4:88219494-88219513 | Msa1002480:CDS | 35.0% | |
| TACTTACTTCCATTGAGCTA+AGG | - | chr6_4:88219506-88219525 | None:intergenic | 35.0% | |
| ATTAGAGGAAAATCTCCATG+AGG | + | chr6_4:88219655-88219674 | Msa1002480:intron | 35.0% | |
| TTAGAGGAAAATCTCCATGA+GGG | + | chr6_4:88219656-88219675 | Msa1002480:intron | 35.0% | |
| ! | GATACTTTTACCCTTTCATC+CGG | + | chr6_4:88219758-88219777 | Msa1002480:intron | 35.0% |
| ! | AATAGTGAAAGCTCTGATAG+TGG | + | chr6_4:88219900-88219919 | Msa1002480:CDS | 35.0% |
| ACTAGATCTTTCTCAAACAC+AGG | + | chr6_4:88219924-88219943 | Msa1002480:CDS | 35.0% | |
| AGGAAGAGATTGAAGATGAA+AGG | + | chr6_4:88220079-88220098 | Msa1002480:CDS | 35.0% | |
| AAGAGATTGAAGATGAAAGG+AGG | + | chr6_4:88220082-88220101 | Msa1002480:CDS | 35.0% | |
| CATCACACAAATTCTCCAAA+AGG | - | chr6_4:88220221-88220240 | None:intergenic | 35.0% | |
| ! | TTGTGTGATGATTTTGCCAA+AGG | + | chr6_4:88220231-88220250 | Msa1002480:CDS | 35.0% |
| TATGCATAATAGTGCGGATA+AGG | + | chr6_4:88220287-88220306 | Msa1002480:CDS | 35.0% | |
| ! | TTAATGGTGATAGCCTTGAT+AGG | + | chr6_4:88220316-88220335 | Msa1002480:CDS | 35.0% |
| ! | TGTGAAGTATTAGCCTATCA+AGG | - | chr6_4:88220332-88220351 | None:intergenic | 35.0% |
| GCTAATACTTCACATTTCAG+AGG | + | chr6_4:88220338-88220357 | Msa1002480:CDS | 35.0% | |
| CAAATGAAGCAAGTTCAAGA+TGG | + | chr6_4:88220381-88220400 | Msa1002480:CDS | 35.0% | |
| AAGCAAGTTCAAGATGGTAT+TGG | + | chr6_4:88220387-88220406 | Msa1002480:CDS | 35.0% | |
| CAACTATTGAATGTGTCTCT+AGG | - | chr6_4:88220422-88220441 | None:intergenic | 35.0% | |
| TCCTTGACTTCTTTAATGGA+GGG | - | chr6_4:88220516-88220535 | None:intergenic | 35.0% | |
| TTCCTTGACTTCTTTAATGG+AGG | - | chr6_4:88220517-88220536 | None:intergenic | 35.0% | |
| AGTTGAAAGGAATCCAATGA+AGG | - | chr6_4:88220555-88220574 | None:intergenic | 35.0% | |
| !! | TTCAAACTTGTTGGTACCAA+CGG | - | chr6_4:88220622-88220641 | None:intergenic | 35.0% |
| ! | CCTTTTCTGTTCAAACTTGT+TGG | - | chr6_4:88220631-88220650 | None:intergenic | 35.0% |
| CCAACAAGTTTGAACAGAAA+AGG | + | chr6_4:88220628-88220647 | Msa1002480:CDS | 35.0% | |
| ! | ACTTAACAAGTGCTTTGTTG+AGG | + | chr6_4:88220665-88220684 | Msa1002480:CDS | 35.0% |
| ! | CTTAACAAGTGCTTTGTTGA+GGG | + | chr6_4:88220666-88220685 | Msa1002480:CDS | 35.0% |
| ! | TTAACAAGTGCTTTGTTGAG+GGG | + | chr6_4:88220667-88220686 | Msa1002480:CDS | 35.0% |
| GGAAATCAAGTGAAATTGGA+AGG | + | chr6_4:88220688-88220707 | Msa1002480:CDS | 35.0% | |
| ! | TCACACAAAGTTGATTCTCT+AGG | - | chr6_4:88220738-88220757 | None:intergenic | 35.0% |
| !!! | ATTTTCTGGTGGACTTTGTA+CGG | - | chr6_4:88220763-88220782 | None:intergenic | 35.0% |
| AAAGTCCACCAGAAAATGAT+AGG | + | chr6_4:88220766-88220785 | Msa1002480:CDS | 35.0% | |
| GTGACATGAATTAATTCCCT+TGG | - | chr6_4:88220799-88220818 | None:intergenic | 35.0% | |
| TGTTTCCAACTAACTGTTCA+AGG | - | chr6_4:88220824-88220843 | None:intergenic | 35.0% | |
| AACAGTTCTTTGTCATCAGA+AGG | + | chr6_4:88220840-88220859 | Msa1002480:CDS | 35.0% | |
| TTTGTCATCAGAAGGTGATA+AGG | + | chr6_4:88220848-88220867 | Msa1002480:CDS | 35.0% | |
| !! | TATATCCTGAGAGTATTTGC+AGG | + | chr6_4:88220871-88220890 | Msa1002480:CDS | 35.0% |
| !! | ATATCCTGAGAGTATTTGCA+GGG | + | chr6_4:88220872-88220891 | Msa1002480:CDS | 35.0% |
| CATTCTGCAGTTACAGTTAA+GGG | + | chr6_4:88220909-88220928 | Msa1002480:CDS | 35.0% | |
| AGACTGAGACATGTTGAAAT+CGG | - | chr6_4:88220973-88220992 | None:intergenic | 35.0% | |
| AGTCTACTAACAAATTGCCT+AGG | + | chr6_4:88220988-88221007 | Msa1002480:CDS | 35.0% | |
| GTCTACTAACAAATTGCCTA+GGG | + | chr6_4:88220989-88221008 | Msa1002480:CDS | 35.0% | |
| TCTACTAACAAATTGCCTAG+GGG | + | chr6_4:88220990-88221009 | Msa1002480:CDS | 35.0% | |
| TGTATGGAGAAAAGGGAAGA+AGG | + | chr6_4:88218544-88218563 | Msa1002480:CDS | 40.0% | |
| AAGGGAAGAAGGAATAATGG+TGG | + | chr6_4:88218555-88218574 | Msa1002480:CDS | 40.0% | |
| !! | AAACTTTTGGAGAAGAGAGG+AGG | + | chr6_4:88218586-88218605 | Msa1002480:CDS | 40.0% |
| AAGTCAACAAGTCTCCAAGT+GGG | - | chr6_4:88218643-88218662 | None:intergenic | 40.0% | |
| AAAGTCAACAAGTCTCCAAG+TGG | - | chr6_4:88218644-88218663 | None:intergenic | 40.0% | |
| !!! | GCAGAGAGTGTTTTTGAAGT+GGG | - | chr6_4:88218700-88218719 | None:intergenic | 40.0% |
| !!! | TGCAGAGAGTGTTTTTGAAG+TGG | - | chr6_4:88218701-88218720 | None:intergenic | 40.0% |
| GAAATCTCTGTGCTAAACTC+TGG | + | chr6_4:88218722-88218741 | Msa1002480:CDS | 40.0% | |
| !! | AAGAAAAGTACCTGGTGAGA+GGG | - | chr6_4:88218793-88218812 | None:intergenic | 40.0% |
| ! | GCTCCTTGATTTTTCATCAG+AGG | + | chr6_4:88219062-88219081 | Msa1002480:intron | 40.0% |
| TGAGCTAAGGCAATTAGAAG+GGG | - | chr6_4:88219493-88219512 | None:intergenic | 40.0% | |
| AGCTGTAGTTCAATCAGTCA+AGG | + | chr6_4:88220059-88220078 | Msa1002480:CDS | 40.0% | |
| GAAGTGAAGTCTTTGTTACG+TGG | + | chr6_4:88220156-88220175 | Msa1002480:CDS | 40.0% | |
| TACTTCACATTTCAGAGGCT+TGG | + | chr6_4:88220343-88220362 | Msa1002480:CDS | 40.0% | |
| CCTTGACTTCTTTAATGGAG+GGG | - | chr6_4:88220515-88220534 | None:intergenic | 40.0% | |
| AATCCAATGAAGGTAGGCAA+GGG | - | chr6_4:88220545-88220564 | None:intergenic | 40.0% | |
| GAAAGGAATCCAATGAAGGT+AGG | - | chr6_4:88220551-88220570 | None:intergenic | 40.0% | |
| ! | TTCACCTCATAATTTTGCCG+AGG | + | chr6_4:88220590-88220609 | Msa1002480:CDS | 40.0% |
| GTTTGAACAGAAAAGGACTG+CGG | + | chr6_4:88220635-88220654 | Msa1002480:CDS | 40.0% | |
| GAGGGGAAATCAAGTGAAAT+TGG | + | chr6_4:88220684-88220703 | Msa1002480:CDS | 40.0% | |
| CCTTAACTGTAACTGCAGAA+TGG | - | chr6_4:88220911-88220930 | None:intergenic | 40.0% | |
| CCATTCTGCAGTTACAGTTA+AGG | + | chr6_4:88220908-88220927 | Msa1002480:CDS | 40.0% | |
| GACTGAGACATGTTGAAATC+GGG | - | chr6_4:88220972-88220991 | None:intergenic | 40.0% | |
| ! | GTATTGTCTTTTACTCCCCT+AGG | - | chr6_4:88221008-88221027 | None:intergenic | 40.0% |
| TATGACTATGAGGAGGCTCA+TGG | - | chr6_4:88218765-88218784 | None:intergenic | 45.0% | |
| GGACTACTATGACTATGAGG+AGG | - | chr6_4:88218772-88218791 | None:intergenic | 45.0% | |
| GAGGGACTACTATGACTATG+AGG | - | chr6_4:88218775-88218794 | None:intergenic | 45.0% | |
| !! | CAAGAAAAGTACCTGGTGAG+AGG | - | chr6_4:88218794-88218813 | None:intergenic | 45.0% |
| GTACGTCAGCTCTCTTCATA+AGG | - | chr6_4:88219188-88219207 | None:intergenic | 45.0% | |
| CAAGCATCAGTTGTTCAGCA+CGG | + | chr6_4:88219426-88219445 | Msa1002480:CDS | 45.0% | |
| CATCGACGATAAATCCCTCA+TGG | - | chr6_4:88219673-88219692 | None:intergenic | 45.0% | |
| TATCGTCGATGATCCTTCTG+AGG | + | chr6_4:88219682-88219701 | Msa1002480:intron | 45.0% | |
| GTCATCCAGAGAGTTAGTCA+AGG | + | chr6_4:88219828-88219847 | Msa1002480:CDS | 45.0% | |
| GAGAACCTTGACTAACTCTC+TGG | - | chr6_4:88219836-88219855 | None:intergenic | 45.0% | |
| TCAAGGTTCTCAAACGTAGC+CGG | + | chr6_4:88219845-88219864 | Msa1002480:CDS | 45.0% | |
| AGAAAGCCTGTATCAGAAGC+TGG | + | chr6_4:88220119-88220138 | Msa1002480:CDS | 45.0% | |
| GCGGATAAGGATCGCATTAA+TGG | + | chr6_4:88220300-88220319 | Msa1002480:CDS | 45.0% | |
| CCCCTCCATTAAAGAAGTCA+AGG | + | chr6_4:88220512-88220531 | Msa1002480:CDS | 45.0% | |
| GAATCCAATGAAGGTAGGCA+AGG | - | chr6_4:88220546-88220565 | None:intergenic | 45.0% | |
| GCTTCCTCGGCAAAATTATG+AGG | - | chr6_4:88220597-88220616 | None:intergenic | 45.0% | |
| ! | CTGCACCTATCATTTTCTGG+TGG | - | chr6_4:88220774-88220793 | None:intergenic | 45.0% |
| CACCAGAAAATGATAGGTGC+AGG | + | chr6_4:88220772-88220791 | Msa1002480:CDS | 45.0% | |
| ! | GTCCTGCACCTATCATTTTC+TGG | - | chr6_4:88220777-88220796 | None:intergenic | 45.0% |
| AAATGATAGGTGCAGGACCA+AGG | + | chr6_4:88220779-88220798 | Msa1002480:CDS | 45.0% | |
| AATGATAGGTGCAGGACCAA+GGG | + | chr6_4:88220780-88220799 | Msa1002480:CDS | 45.0% | |
| CACAGCCTTGAACAGTTAGT+TGG | + | chr6_4:88220816-88220835 | Msa1002480:CDS | 45.0% | |
| TCTTCCCTGCAAATACTCTC+AGG | - | chr6_4:88220879-88220898 | None:intergenic | 45.0% | |
| TGGCAAAACTGCTTGAAGCA+AGG | + | chr6_4:88221033-88221052 | Msa1002480:CDS | 45.0% | |
| ACTGCTTGAAGCAAGGTTAG+AGG | + | chr6_4:88221040-88221059 | Msa1002480:CDS | 45.0% | |
| !! | AAAAAAAAATTAATTGAAAA+TGG | - | chr6_4:88218825-88218844 | None:intergenic | 5.0% |
| TTGGAGAAGAGAGGAGGAAG+AGG | + | chr6_4:88218592-88218611 | Msa1002480:CDS | 50.0% | |
| AGAAGAGAGGAGGAAGAGGA+AGG | + | chr6_4:88218596-88218615 | Msa1002480:CDS | 50.0% | |
| TCAACAAGTCTCCAAGTGGG+TGG | - | chr6_4:88218640-88218659 | None:intergenic | 50.0% | |
| TCATAGTAGTCCCTCTCACC+AGG | + | chr6_4:88218780-88218799 | Msa1002480:CDS | 50.0% | |
| ! | AGCAGATGCTGGCTGTATTG+CGG | - | chr6_4:88219385-88219404 | None:intergenic | 50.0% |
| CATCCTGTTCTTCAAGACGC+CGG | - | chr6_4:88219867-88219886 | None:intergenic | 50.0% | |
| CACTAGCCAGCTTCTGATAC+AGG | - | chr6_4:88220128-88220147 | None:intergenic | 50.0% | |
| TCACCCTTGCCTACCTTCAT+TGG | + | chr6_4:88220539-88220558 | Msa1002480:CDS | 50.0% | |
| GTTCAACACCACCACCCACT+TGG | + | chr6_4:88218626-88218645 | Msa1002480:CDS | 55.0% | |
| ACAAGTCTCCAAGTGGGTGG+TGG | - | chr6_4:88218637-88218656 | None:intergenic | 55.0% | |
| ATGAGGAGGCTCATGGTGGT+GGG | - | chr6_4:88218758-88218777 | None:intergenic | 55.0% | |
| TATGAGGAGGCTCATGGTGG+TGG | - | chr6_4:88218759-88218778 | None:intergenic | 55.0% | |
| GACTATGAGGAGGCTCATGG+TGG | - | chr6_4:88218762-88218781 | None:intergenic | 55.0% | |
| CTCGAGTCTCTAGCAGATGC+TGG | - | chr6_4:88219396-88219415 | None:intergenic | 55.0% | |
| TAGCCGGCGTCTTGAAGAAC+AGG | + | chr6_4:88219861-88219880 | Msa1002480:CDS | 55.0% | |
| TTTGCCGAGGAAGCTTCCGT+TGG | + | chr6_4:88220603-88220622 | Msa1002480:CDS | 55.0% | |
| GGTACCAACGGAAGCTTCCT+CGG | - | chr6_4:88220610-88220629 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 88218445 | 88221211 | 88218445 | ID=Msa1002480;Name=Msa1002480 |
| chr6_4 | mRNA | 88218445 | 88221211 | 88218445 | ID=Msa1002480-mRNA-1;Parent=Msa1002480;Name=Msa1002480-mRNA-1;_AED=0.19;_eAED=0.19;_QI=81|1|1|1|1|1|3|108|562 |
| chr6_4 | exon | 88218445 | 88218801 | 88218445 | ID=Msa1002480-mRNA-1:exon:17177;Parent=Msa1002480-mRNA-1 |
| chr6_4 | exon | 88219393 | 88219518 | 88219393 | ID=Msa1002480-mRNA-1:exon:17178;Parent=Msa1002480-mRNA-1 |
| chr6_4 | exon | 88219817 | 88221211 | 88219817 | ID=Msa1002480-mRNA-1:exon:17179;Parent=Msa1002480-mRNA-1 |
| chr6_4 | five_prime_UTR | 88218445 | 88218525 | 88218445 | ID=Msa1002480-mRNA-1:five_prime_utr;Parent=Msa1002480-mRNA-1 |
| chr6_4 | CDS | 88218526 | 88218801 | 88218526 | ID=Msa1002480-mRNA-1:cds;Parent=Msa1002480-mRNA-1 |
| chr6_4 | CDS | 88219393 | 88219518 | 88219393 | ID=Msa1002480-mRNA-1:cds;Parent=Msa1002480-mRNA-1 |
| chr6_4 | CDS | 88219817 | 88221103 | 88219817 | ID=Msa1002480-mRNA-1:cds;Parent=Msa1002480-mRNA-1 |
| chr6_4 | three_prime_UTR | 88221104 | 88221211 | 88221104 | ID=Msa1002480-mRNA-1:three_prime_utr;Parent=Msa1002480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
