AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1352350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1352350 MtrunA17_Chr8g0389931 96.956 657 20 0 1 657 1 657 0.0 1332
Msa1352350 MtrunA17_Chr5g0448331 81.361 676 116 5 1 668 5 678 0.0 1091
Msa1352350 MtrunA17_Chr3g0143561 60.480 458 105 10 20 477 12 393 0.0 543
Msa1352350 MtrunA17_Chr6g0470171 51.429 210 55 4 45 253 8 171 7.11e-58 193
Msa1352350 MtrunA17_Chr6g0470181 64.179 67 19 2 343 407 1 64 2.49e-20 85.1
Msa1352350 MtrunA17_Chr6g0476111 33.684 190 108 6 261 438 223 406 1.56e-19 93.2
Msa1352350 MtrunA17_Chr6g0476121 33.158 190 109 6 261 438 172 355 3.08e-18 89.0
Msa1352350 MtrunA17_Chr7g0252211 33.508 191 108 6 261 438 285 469 4.40e-18 88.6
Msa1352350 MtrunA17_Chr1g0163051 34.615 156 89 3 261 409 217 366 1.71e-17 86.7
Msa1352350 MtrunA17_Chr8g0368901 36.076 158 87 4 261 409 325 477 7.71e-16 81.6
Msa1352350 MtrunA17_Chr4g0003501 33.974 156 86 4 261 410 512 656 1.49e-15 80.9
Msa1352350 MtrunA17_Chr8g0368911 34.177 158 90 3 261 409 318 470 2.86e-15 79.7
Msa1352350 MtrunA17_Chr8g0369301 36.076 158 87 4 261 409 305 457 3.78e-15 79.3
Msa1352350 MtrunA17_Chr7g0255181 31.481 162 93 4 261 414 263 414 3.42e-14 76.3
Msa1352350 MtrunA17_Chr1g0163041 31.646 158 93 5 261 409 134 285 4.53e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1352350 AT1G57820.1 62.559 633 208 11 4 616 6 629 0.0 788
Msa1352350 AT1G57820.3 62.559 633 208 11 4 616 6 629 0.0 788
Msa1352350 AT1G57820.2 62.085 633 208 12 4 616 6 626 0.0 777
Msa1352350 AT5G39550.1 60.331 605 207 10 1 594 3 585 0.0 734
Msa1352350 AT1G66050.1 61.307 597 201 10 1 586 3 580 0.0 726
Msa1352350 AT1G66040.1 61.307 597 201 10 1 586 3 580 0.0 725
Msa1352350 AT1G57800.2 54.312 661 246 14 2 615 4 655 0.0 696
Msa1352350 AT1G57800.1 53.939 660 246 14 2 615 4 651 0.0 687
Msa1352350 AT4G08590.2 51.173 469 175 12 4 462 6 430 4.42e-154 453
Msa1352350 AT4G08590.1 51.277 470 174 13 4 462 6 431 6.08e-153 451
Msa1352350 AT4G08590.6 50.985 457 169 13 4 449 6 418 1.51e-146 432
Msa1352350 AT4G08590.3 49.644 421 157 13 4 413 6 382 1.79e-128 385
Msa1352350 AT4G08590.4 47.891 403 156 12 4 396 6 364 4.95e-116 352
Msa1352350 AT4G08590.5 47.891 403 156 12 4 396 6 364 4.95e-116 352
Msa1352350 AT5G13960.1 33.333 201 112 6 261 445 153 347 1.45e-17 87.0
Msa1352350 AT5G13960.2 37.179 156 87 5 295 445 64 213 1.90e-17 86.3
Msa1352350 AT2G35160.5 35.625 160 92 5 261 413 333 488 3.45e-16 83.2
Msa1352350 AT2G35160.2 35.625 160 92 5 261 413 369 524 3.67e-16 83.2
Msa1352350 AT2G35160.3 35.625 160 92 5 261 413 369 524 3.67e-16 83.2
Msa1352350 AT2G35160.1 35.625 160 92 5 261 413 369 524 3.67e-16 83.2
Msa1352350 AT2G35160.4 35.625 160 92 5 261 413 369 524 3.67e-16 83.2
Msa1352350 AT2G22740.2 29.412 221 136 5 261 473 334 542 4.23e-16 82.8
Msa1352350 AT2G22740.1 29.412 221 136 5 261 473 334 542 4.23e-16 82.8
Msa1352350 AT5G04940.2 29.885 261 135 11 261 507 215 441 2.50e-15 80.1
Msa1352350 AT5G04940.1 29.885 261 135 11 261 507 215 441 2.50e-15 80.1
Msa1352350 AT2G33290.1 35.032 157 87 4 261 410 211 359 2.10e-14 77.4
Msa1352350 AT2G33290.3 35.032 157 87 4 261 410 211 359 2.10e-14 77.4
Msa1352350 AT2G33290.4 35.032 157 87 4 261 410 211 359 2.10e-14 77.4
Msa1352350 AT2G33290.2 35.032 157 87 4 261 410 211 359 2.10e-14 77.4
Msa1352350 AT4G13460.1 32.843 204 112 7 261 450 209 401 3.46e-14 76.6
Msa1352350 AT4G13460.2 32.843 204 112 7 261 450 209 401 3.46e-14 76.6
Msa1352350 AT1G17770.1 31.707 164 88 5 261 413 231 381 1.73e-11 67.8

Find 224 sgRNAs with CRISPR-Local

Find 316 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAAACTAGGCTTTAAATT+AGG 0.121576 tig0012581:+272065 Msa1352350:exon
AGAAGATATTTACTGAATTT+AGG 0.158110 tig0012581:+272187 Msa1352350:three_prime_UTR
CCCCATGTGGCTGGCATTGC+TGG 0.165381 tig0012581:+269621 Msa1352350:CDS
GGCTCAATCTGTTGCACTTT+CGG 0.170233 tig0012581:+269659 Msa1352350:CDS
CGCATTGATTCGTGGATTAC+TGG 0.205826 tig0012581:-269295 None:intergenic
GCTCAATCTGTTGCACTTTC+GGG 0.210487 tig0012581:+269660 Msa1352350:CDS
AAAATCTTGTGGACTTCTAT+TGG 0.211838 tig0012581:+272159 Msa1352350:three_prime_UTR
ACCATTCCGAAAGATCATTT+TGG 0.229790 tig0012581:+269498 Msa1352350:CDS
TTAAACTAGGCTTTAAATTA+GGG 0.246932 tig0012581:+272066 Msa1352350:exon
GAAGATATTTACTGAATTTA+GGG 0.256975 tig0012581:+272188 Msa1352350:three_prime_UTR
TTTCTGGCCAAAGTTATATT+AGG 0.257421 tig0012581:+271078 Msa1352350:CDS
CCATCTGTTCAGCCTGTTGC+TGG 0.265242 tig0012581:-271819 None:intergenic
TCAACACTATGATAAACTTT+TGG 0.267094 tig0012581:-269387 None:intergenic
ATATCATCTATCTATAACTA+TGG 0.267193 tig0012581:+272240 Msa1352350:three_prime_UTR
GAGAAATGCTGGCGCAAAAT+TGG 0.280557 tig0012581:+270048 Msa1352350:CDS
TTCACTGGCTTCTTACTTAG+AGG 0.297296 tig0012581:-270758 None:intergenic
CCTTTAAACTCCTTAATTAC+AGG 0.297648 tig0012581:-270405 None:intergenic
TCAGTTGTATAAGCAGTATC+AGG 0.302375 tig0012581:-269423 None:intergenic
CCTGTAATTAAGGAGTTTAA+AGG 0.304552 tig0012581:+270405 Msa1352350:CDS
CCGTCCACTACCTGTAATTA+AGG 0.306280 tig0012581:+270395 Msa1352350:CDS
AAGGTAGCTGCTTCGACATT+TGG 0.310999 tig0012581:-268474 None:intergenic
AAATCTTGTGGACTTCTATT+GGG 0.321434 tig0012581:+272160 Msa1352350:three_prime_UTR
TTGCTCTGTAGTGATTTATC+AGG 0.331832 tig0012581:+270363 Msa1352350:intron
GAAACCTCTGTCTCCTCATC+TGG 0.333300 tig0012581:-271889 None:intergenic
GACTGCAATTCCAGCGAAAA+TGG 0.341889 tig0012581:+269272 Msa1352350:CDS
AGAATTGAGGTTGGAATTAG+AGG 0.343041 tig0012581:-268598 None:intergenic
TCACTGGATTTGTAATTGTT+TGG 0.354710 tig0012581:-268431 None:intergenic
CAACTTCTGCAAAGCTTGCC+TGG 0.358824 tig0012581:+271046 Msa1352350:CDS
TGAAAGAAACTAACAGTAAC+AGG 0.365938 tig0012581:-268883 None:intergenic
GTCTAAATTTCAGGAGGAAA+AGG 0.367223 tig0012581:+270709 Msa1352350:intron
GGATTTGTAATTGTTTGGTT+AGG 0.370496 tig0012581:-268426 None:intergenic
GGGTTCTTGTTGGTGATACA+TGG 0.371099 tig0012581:+269559 Msa1352350:CDS
GATAGGGTCATAAGGTTTGC+AGG 0.378221 tig0012581:+270196 Msa1352350:intron
ACTAGATCTCCGGCGATAGA+TGG 0.381976 tig0012581:-268673 None:intergenic
TCATATCTCACTCCTGCTTC+CGG 0.383404 tig0012581:-270009 None:intergenic
CCCTATTCCTAATATAACTT+TGG 0.385855 tig0012581:-271085 None:intergenic
GCCAAAGTTATATTAGGAAT+AGG 0.386276 tig0012581:+271084 Msa1352350:CDS
ATCGGTCCAAAATGATCTTT+CGG 0.386659 tig0012581:-269504 None:intergenic
CTCAGAGTGGCCGCGCTTTG+CGG 0.393158 tig0012581:+271111 Msa1352350:CDS
GTTATCCTGTTCGTGTTGTT+AGG 0.396528 tig0012581:+269838 Msa1352350:CDS
TGGTTCCTTTACACGGGAAG+TGG 0.404125 tig0012581:+269714 Msa1352350:CDS
GCTCACTTTCCCCATGTGGC+TGG 0.410799 tig0012581:+269612 Msa1352350:CDS
CCAAAGTTATATTAGGAATA+GGG 0.411543 tig0012581:+271085 Msa1352350:CDS
CAAAGCAATGGCTTTAAACT+AGG 0.414652 tig0012581:+272053 Msa1352350:CDS
CTTTCTGTGATAGGGTCATA+AGG 0.415365 tig0012581:+270188 Msa1352350:intron
TAGGATGGACTGTAGGCAAT+GGG 0.422920 tig0012581:+269587 Msa1352350:CDS
TCCAACCTCAATTCTCGATT+GGG 0.423904 tig0012581:+268606 Msa1352350:CDS
GAAGTAAAATAAAAGTTGTT+AGG 0.426055 tig0012581:+270801 Msa1352350:CDS
AACTCCTTAATTACAGGTAG+TGG 0.426574 tig0012581:-270399 None:intergenic
CTATTGTTTGTTTCACCAGT+TGG 0.427799 tig0012581:-268787 None:intergenic
AACGAACTTGCTCGAATTGT+AGG 0.430282 tig0012581:+269250 Msa1352350:CDS
CGTTATAATGTATATTTACA+AGG 0.431023 tig0012581:+272337 Msa1352350:three_prime_UTR
TTCCAACCTCAATTCTCGAT+TGG 0.431388 tig0012581:+268605 Msa1352350:CDS
GCCAACTGCGCATTGATTCG+TGG 0.435702 tig0012581:-269303 None:intergenic
CAAGGATATCACCTATGTAT+AGG 0.440870 tig0012581:+272355 Msa1352350:three_prime_UTR
AACCTTGTAGATCCCGTAGA+TGG 0.441088 tig0012581:+270779 Msa1352350:CDS
CATAGAATCACTCCAGCAAC+AGG 0.450682 tig0012581:+271807 Msa1352350:CDS
TGAAGGGTTTCAGTTTCTAA+AGG 0.455219 tig0012581:-268535 None:intergenic
GGCTTCTTACTTAGAGGTGG+AGG 0.455434 tig0012581:-270752 None:intergenic
AGGAAAAGGGCTGTTGGTTG+TGG 0.457564 tig0012581:+270723 Msa1352350:CDS
TCTAAATTTCAGGAGGAAAA+GGG 0.458204 tig0012581:+270710 Msa1352350:intron
AATATAACTTTGGCCAGAAA+AGG 0.463331 tig0012581:-271075 None:intergenic
GAAGCAGGAGTGAGATATGA+TGG 0.463457 tig0012581:+270012 Msa1352350:CDS
AGCTGCTTCGACATTTGGAT+TGG 0.471231 tig0012581:-268469 None:intergenic
ATAGGTAAACAGGGAAATGA+TGG 0.472208 tig0012581:+271780 Msa1352350:intron
ACTGAGAGAGCAAAGAAAAC+AGG 0.475334 tig0012581:+269441 Msa1352350:CDS
CTAACAGTAACAGGTCTCTC+AGG 0.475349 tig0012581:-268874 None:intergenic
TTGCGCATGTTCGACAATGA+AGG 0.476061 tig0012581:-268552 None:intergenic
TTTGAGAGATGGATTAAGCT+AGG 0.476184 tig0012581:+269225 Msa1352350:CDS
TTCTGCAAAGCTTGCCTGGA+GGG 0.476412 tig0012581:+271050 Msa1352350:CDS
AGCAGAACGTTTCTCCTTGT+GGG 0.480480 tig0012581:-269980 None:intergenic
ACCCTGCGATCTTGCTACCT+TGG 0.482344 tig0012581:-269343 None:intergenic
CCTTTCCTCCGTTTCTGTGG+AGG 0.482447 tig0012581:-271970 None:intergenic
TCTGCTTATGCACCGGAAGC+AGG 0.484529 tig0012581:+269997 Msa1352350:CDS
ACAGACCTAACAACACGAAC+AGG 0.484685 tig0012581:-269843 None:intergenic
ACCAACCTTGTCCATGGAGC+TGG 0.485991 tig0012581:-270246 None:intergenic
TTTATAGAATTGAGAAATGC+TGG 0.487676 tig0012581:+270037 Msa1352350:CDS
GCAGCGGAATCGCCGGCGAC+GGG 0.487908 tig0012581:-268649 None:intergenic
AAAGAAAGGGTGATCCATCA+TGG 0.491109 tig0012581:+270445 Msa1352350:CDS
GCTTCGACATTTGGATTGGT+TGG 0.491849 tig0012581:-268465 None:intergenic
GCAAGATCGCAGGGTGGTGT+TGG 0.495237 tig0012581:+269351 Msa1352350:CDS
GATTGATATTACTGAAAGAA+AGG 0.496742 tig0012581:+270431 Msa1352350:CDS
GGTGGGGCTTCTAATCCAAC+TGG 0.497248 tig0012581:+268772 Msa1352350:CDS
AGATGGAGCAGCGGAATCGC+CGG 0.497890 tig0012581:-268656 None:intergenic
AGAACCCCACGGTTCCTTGT+TGG 0.498957 tig0012581:-269543 None:intergenic
CAATATATGTCGCAAGGTGT+TGG 0.499103 tig0012581:+270995 Msa1352350:CDS
AGCAGCGGAATCGCCGGCGA+CGG 0.500128 tig0012581:-268650 None:intergenic
ACTGGCTTCTTACTTAGAGG+TGG 0.502069 tig0012581:-270755 None:intergenic
ATCTGAATCCTCCACAGAAA+CGG 0.503509 tig0012581:+271962 Msa1352350:CDS
AAAGGTGTCCTTCAAAATCA+AGG 0.505676 tig0012581:+270835 Msa1352350:CDS
AGGAACCGTGGGGTTCTTGT+TGG 0.509560 tig0012581:+269549 Msa1352350:CDS
CTCAGACTGAGTTGTCGAAA+AGG 0.510946 tig0012581:+269816 Msa1352350:CDS
GGTTCCTTTACACGGGAAGT+GGG 0.511908 tig0012581:+269715 Msa1352350:CDS
CGGTGAGTGGTTCCTTTACA+CGG 0.513541 tig0012581:+269707 Msa1352350:CDS
AGGTGCTGGTGGCAAGGCTG+CGG 0.516252 tig0012581:+271990 Msa1352350:CDS
GTTGGTAAAATGTCACTCAC+TGG 0.517234 tig0012581:-268447 None:intergenic
GGAAAGGCAAATGCTTGCAG+TGG 0.518736 tig0012581:+269462 Msa1352350:CDS
TTCAGGAGGAAAAGGGCTGT+TGG 0.518740 tig0012581:+270717 Msa1352350:intron
AGATCGCAGGGTGGTGTTGG+AGG 0.520960 tig0012581:+269354 Msa1352350:CDS
CTTAATTACAGGTAGTGGAC+GGG 0.521249 tig0012581:-270394 None:intergenic
CATTATAACGGTGGAAACAT+AGG 0.521571 tig0012581:-272324 None:intergenic
CCAGCAACAGGCTGAACAGA+TGG 0.522139 tig0012581:+271819 Msa1352350:CDS
ATCATTCTCGATGGCGCGAA+TGG 0.523127 tig0012581:-268701 None:intergenic
GGCCAGAAAAGGCACCCTCC+AGG 0.525887 tig0012581:-271064 None:intergenic
TCCACGAATCAATGCGCAGT+TGG 0.529107 tig0012581:+269302 Msa1352350:CDS
GGTTCTTGTTGGTGATACAT+GGG 0.529549 tig0012581:+269560 Msa1352350:CDS
GCACCTTTCCTCCGTTTCTG+TGG 0.530401 tig0012581:-271973 None:intergenic
TGCGCATGTTCGACAATGAA+GGG 0.532166 tig0012581:-268551 None:intergenic
GGCCAAGGTAGCAAGATCGC+AGG 0.532514 tig0012581:+269341 Msa1352350:CDS
TTTAAATTAGGGGTGGGTGA+TGG 0.533686 tig0012581:+272077 Msa1352350:three_prime_UTR
AAGCAGAACGTTTCTCCTTG+TGG 0.535286 tig0012581:-269981 None:intergenic
TTCCTTTACACGGGAAGTGG+GGG 0.536362 tig0012581:+269717 Msa1352350:CDS
GGATCATTCTCAGCAACAAT+CGG 0.537495 tig0012581:-269522 None:intergenic
ATTGATATTACTGAAAGAAA+GGG 0.540474 tig0012581:+270432 Msa1352350:CDS
AACGACAAGAACTCGTTGGT+GGG 0.540602 tig0012581:+268755 Msa1352350:CDS
TGGCAAGGCTGCGGCGAACA+CGG 0.540848 tig0012581:+271999 Msa1352350:CDS
CTATGTCAGTTGAACAAGTA+GGG 0.541131 tig0012581:-271157 None:intergenic
GAGGAAAGGTGCTGGTGGCA+AGG 0.542633 tig0012581:+271984 Msa1352350:CDS
GACCAGCAATGCCAGCCACA+TGG 0.543440 tig0012581:-269623 None:intergenic
AAATCAGAAGAAGAAAAGAG+AGG 0.544616 tig0012581:+268393 Msa1352350:five_prime_UTR
GATTGTTCTCAACCCGTCGC+CGG 0.544832 tig0012581:+268637 Msa1352350:CDS
GGCGACGGGTTGAGAACAAT+CGG 0.545056 tig0012581:-268635 None:intergenic
ACTAGGCTTTAAATTAGGGG+TGG 0.546628 tig0012581:+272070 Msa1352350:exon
CTAGGCTTTAAATTAGGGGT+GGG 0.547757 tig0012581:+272071 Msa1352350:exon
CAATCTGTTGCACTTTCGGG+TGG 0.550312 tig0012581:+269663 Msa1352350:CDS
CTTGTAAATATACATTATAA+CGG 0.551101 tig0012581:-272336 None:intergenic
ACTAAAACCAACCTTGTCCA+TGG 0.553488 tig0012581:-270252 None:intergenic
ACCAGCAATGCCAGCCACAT+GGG 0.555202 tig0012581:-269622 None:intergenic
TATCATCTATCTATAACTAT+GGG 0.555949 tig0012581:+272241 Msa1352350:three_prime_UTR
AATGGCGGAAACTAGATCTC+CGG 0.557159 tig0012581:-268683 None:intergenic
ATAGGATGGACTGTAGGCAA+TGG 0.558208 tig0012581:+269586 Msa1352350:CDS
GCATTCCCAATCGAGAATTG+AGG 0.561022 tig0012581:-268611 None:intergenic
TTGCAGAAGTTGTGAGCACA+AGG 0.563114 tig0012581:-271035 None:intergenic
ACACGCCATGCAAACACCAT+CGG 0.564270 tig0012581:-268503 None:intergenic
TTGGTGATACATGGGAGGAT+AGG 0.564503 tig0012581:+269568 Msa1352350:CDS
TAAACTAGGCTTTAAATTAG+GGG 0.565017 tig0012581:+272067 Msa1352350:exon
GTTCCTTTACACGGGAAGTG+GGG 0.565830 tig0012581:+269716 Msa1352350:CDS
ACAAACAATAGACGCAGTAA+TGG 0.566643 tig0012581:+268799 Msa1352350:CDS
TGATACATGGGAGGATAGGA+TGG 0.568109 tig0012581:+269572 Msa1352350:CDS
TTCCATCTACGGGATCTACA+AGG 0.569005 tig0012581:-270781 None:intergenic
TGTCCTTCAAAATCAAGGAT+AGG 0.570073 tig0012581:+270840 Msa1352350:CDS
AAGCAGGAGTGAGATATGAT+GGG 0.570701 tig0012581:+270013 Msa1352350:CDS
GGGTGGTTACGTCGATGATG+AGG 0.573268 tig0012581:+269680 Msa1352350:CDS
TGACGCCGATGGTGTTTGCA+TGG 0.574105 tig0012581:+268498 Msa1352350:CDS
TTTGCAGGTATTTGTTTGTG+AGG 0.577114 tig0012581:+270211 Msa1352350:CDS
GTTGGCGATTGCGATTCGTA+TGG 0.577533 tig0012581:+269320 Msa1352350:CDS
CTTACATCAAAGTCCCATGA+TGG 0.578513 tig0012581:-270459 None:intergenic
CAGAAACGGAGGAAAGGTGC+TGG 0.579863 tig0012581:+271976 Msa1352350:CDS
ACGGGATCTACAAGGTTCAC+TGG 0.581841 tig0012581:-270773 None:intergenic
CCTCCACAGAAACGGAGGAA+AGG 0.583231 tig0012581:+271970 Msa1352350:CDS
AAGATATGACACCTATACAT+AGG 0.585813 tig0012581:-272366 None:intergenic
TCCGCTGCTCCATCTATCGC+CGG 0.586761 tig0012581:+268664 Msa1352350:CDS
ATGATCCAACAAGGAACCGT+GGG 0.587067 tig0012581:+269538 Msa1352350:CDS
TCCAAAATGATCTTTCGGAA+TGG 0.587351 tig0012581:-269499 None:intergenic
TCCCAATCGAGAATTGAGGT+TGG 0.588219 tig0012581:-268607 None:intergenic
GTGACAATGAGCCAGCTCCA+TGG 0.592691 tig0012581:+270235 Msa1352350:CDS
CTCAGGCAAATGCATGCAGA+AGG 0.593870 tig0012581:-268857 None:intergenic
GGCTTGCTTGATATCTTCGA+CGG 0.595055 tig0012581:+268820 Msa1352350:CDS
ATGAGCCAGCTCCATGGACA+AGG 0.595160 tig0012581:+270241 Msa1352350:CDS
ATCAAGGATAGGCTATTGAA+AGG 0.595479 tig0012581:+270851 Msa1352350:CDS
GAAACGTTCTGCTTATGCAC+CGG 0.598496 tig0012581:+269990 Msa1352350:CDS
ATGATGAGGACCACGGTGAG+TGG 0.598801 tig0012581:+269694 Msa1352350:CDS
ATATTTACTGAATTTAGGGA+CGG 0.598844 tig0012581:+272192 Msa1352350:three_prime_UTR
GCTATGTCAGTTGAACAAGT+AGG 0.603141 tig0012581:-271158 None:intergenic
GAGAGCAAAGAAAACAGGAA+AGG 0.603334 tig0012581:+269446 Msa1352350:CDS
AAACGACAAGAACTCGTTGG+TGG 0.604581 tig0012581:+268754 Msa1352350:CDS
GGGAGCTCACTTTCCCCATG+TGG 0.605209 tig0012581:+269608 Msa1352350:CDS
GTCATCTGTTAAACGTGTGA+AGG 0.606846 tig0012581:+272265 Msa1352350:three_prime_UTR
CCTTAATTACAGGTAGTGGA+CGG 0.608213 tig0012581:-270395 None:intergenic
TCCTTTACACGGGAAGTGGG+GGG 0.611109 tig0012581:+269718 Msa1352350:CDS
TGTTGGTTTCAGACACCATG+TGG 0.611898 tig0012581:+269180 Msa1352350:intron
TAGGTAAACAGGGAAATGAT+GGG 0.612689 tig0012581:+271781 Msa1352350:intron
TGATTATCTTCAGAATCCAC+AGG 0.613570 tig0012581:+271181 Msa1352350:CDS
GCCAAGGTAGCAAGATCGCA+GGG 0.613846 tig0012581:+269342 Msa1352350:CDS
ACAGTTTGAGAACATGAATG+AGG 0.614864 tig0012581:+269791 Msa1352350:CDS
AAGAAAGGGTGATCCATCAT+GGG 0.617640 tig0012581:+270446 Msa1352350:CDS
GAAAGGCAAATGCTTGCAGT+GGG 0.618010 tig0012581:+269463 Msa1352350:CDS
CAGCTACCTTGTGACGCCGA+TGG 0.618405 tig0012581:+268487 Msa1352350:CDS
CAGTTGTATAAGCAGTATCA+GGG 0.618478 tig0012581:-269422 None:intergenic
ATTGCTGGTCAGAGTACACA+CGG 0.620317 tig0012581:+269636 Msa1352350:CDS
ATTCTCGATGGCGCGAATGG+CGG 0.623248 tig0012581:-268698 None:intergenic
CGGTTGCAATATATGTCGCA+AGG 0.623774 tig0012581:+270989 Msa1352350:CDS
CAAGCCAGATGAGGAGACAG+AGG 0.627835 tig0012581:+271885 Msa1352350:CDS
TTAATTACAGGTAGTGGACG+GGG 0.630700 tig0012581:-270393 None:intergenic
TGATGCTTCGCTTACCGATG+AGG 0.632600 tig0012581:+268720 Msa1352350:CDS
TGAGCACAAGGCGTAGTGAG+AGG 0.632833 tig0012581:-271023 None:intergenic
GGGAGGATAGGATGGACTGT+AGG 0.633787 tig0012581:+269580 Msa1352350:CDS
GTCGAACATGCGCAACTCCG+TGG 0.636269 tig0012581:+268560 Msa1352350:CDS
AAGAAACGACAAGAACTCGT+TGG 0.636427 tig0012581:+268751 Msa1352350:CDS
GGTGAGTGGTTCCTTTACAC+GGG 0.638018 tig0012581:+269708 Msa1352350:CDS
TATCTGGTTCAGGTCCCACA+AGG 0.638859 tig0012581:+269966 Msa1352350:intron
GGTAAACAAGGAACATGCCA+CGG 0.638895 tig0012581:-268577 None:intergenic
AAACGTAGGAAGCAAAGCAA+TGG 0.642429 tig0012581:+272041 Msa1352350:CDS
GCAACAGGCTGAACAGATGG+AGG 0.643602 tig0012581:+271822 Msa1352350:CDS
GATTGCGATTCGTATGGCCA+AGG 0.645669 tig0012581:+269326 Msa1352350:CDS
AAGCGAAGCATCATTCTCGA+TGG 0.646924 tig0012581:-268710 None:intergenic
TGAATCCTCCACAGAAACGG+AGG 0.653417 tig0012581:+271965 Msa1352350:CDS
TCCGGCGATAGATGGAGCAG+CGG 0.654768 tig0012581:-268665 None:intergenic
TCTTGTTGGTGATACATGGG+AGG 0.655577 tig0012581:+269563 Msa1352350:CDS
GTTGGAATTAGAGGTAAACA+AGG 0.655876 tig0012581:-268589 None:intergenic
TGAAAATCTCAAGCCAGATG+AGG 0.658043 tig0012581:+271876 Msa1352350:CDS
AATGATCCAACAAGGAACCG+TGG 0.659307 tig0012581:+269537 Msa1352350:CDS
CTTCTGCAAAGCTTGCCTGG+AGG 0.661026 tig0012581:+271049 Msa1352350:CDS
CCAGCAATGCCAGCCACATG+GGG 0.663982 tig0012581:-269621 None:intergenic
CACGGAGGAACATATTGACG+AGG 0.665899 tig0012581:+272017 Msa1352350:CDS
CATATTGACGAGGCAAACGT+AGG 0.666576 tig0012581:+272027 Msa1352350:CDS
TTGCTGGTCAGAGTACACAC+GGG 0.671136 tig0012581:+269637 Msa1352350:CDS
AGGATGGACTGTAGGCAATG+GGG 0.672226 tig0012581:+269588 Msa1352350:CDS
ACGACAAGAACTCGTTGGTG+GGG 0.672283 tig0012581:+268756 Msa1352350:CDS
CAAACACCATCGGCGTCACA+AGG 0.672371 tig0012581:-268493 None:intergenic
AGCAGGAGTGAGATATGATG+GGG 0.676405 tig0012581:+270014 Msa1352350:CDS
AAACGGAGGAAAGGTGCTGG+TGG 0.676422 tig0012581:+271979 Msa1352350:CDS
GTTGGTTTCAGACACCATGT+GGG 0.680763 tig0012581:+269181 Msa1352350:intron
GTAAATATACATTATAACGG+TGG 0.685782 tig0012581:-272333 None:intergenic
TTGCTGAGAATGATCCAACA+AGG 0.687062 tig0012581:+269529 Msa1352350:CDS
TTACAGGTAGTGGACGGGGA+CGG 0.692145 tig0012581:-270389 None:intergenic
AGGAATAGGGCATCTCAGAG+TGG 0.716214 tig0012581:+271098 Msa1352350:CDS
CAAGGCTGCGGCGAACACGG+AGG 0.722485 tig0012581:+272002 Msa1352350:CDS
TATCACCAACAAGAACCCCA+CGG 0.735719 tig0012581:-269554 None:intergenic
TGCTGGTCAGAGTACACACG+GGG 0.735876 tig0012581:+269638 Msa1352350:CDS
TGTAAAGGAACCACTCACCG+TGG 0.737377 tig0012581:-269704 None:intergenic
TGATCCAACAAGGAACCGTG+GGG 0.760116 tig0012581:+269539 Msa1352350:CDS
AAGGTAGCAAGATCGCAGGG+TGG 0.760686 tig0012581:+269345 Msa1352350:CDS
TACGTCGATGATGAGGACCA+CGG 0.776378 tig0012581:+269687 Msa1352350:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTGATATTAAACAAATT+AGG - tig0012581:269905-269924 None:intergenic 10.0%
!! AATGTTAAAAGAAATGAAAA+GGG - tig0012581:268914-268933 None:intergenic 15.0%
!! AAATGTTAAAAGAAATGAAA+AGG - tig0012581:268915-268934 None:intergenic 15.0%
!!! TTTAACTGAATAGTTTATTT+TGG + tig0012581:269067-269086 Msa1352350:intron 15.0%
!! AACAAAAATAAGTTAAGTTA+AGG - tig0012581:269115-269134 None:intergenic 15.0%
!!! TTTTTTGAAATTGAAAATGA+AGG + tig0012581:269149-269168 Msa1352350:intron 15.0%
!! TATAGTATGTTCAATTAATA+CGG + tig0012581:270934-270953 Msa1352350:intron 15.0%
!! TCAATAATTATATTGTTATC+AGG + tig0012581:271323-271342 Msa1352350:intron 15.0%
!! TCATTTCATAATATTTGATT+TGG - tig0012581:271450-271469 None:intergenic 15.0%
!! CTTGTAAATATACATTATAA+CGG - tig0012581:272339-272358 None:intergenic 15.0%
!! ATGTTAAAAGAAATGAAAAG+GGG - tig0012581:268913-268932 None:intergenic 20.0%
!! TGTTCAAAATTTATTGTTGA+TGG + tig0012581:270161-270180 Msa1352350:intron 20.0%
!! GTTCAAAATTTATTGTTGAT+GGG + tig0012581:270162-270181 Msa1352350:intron 20.0%
!! TTCAAAATTTATTGTTGATG+GGG + tig0012581:270163-270182 Msa1352350:intron 20.0%
!! CAAAGGAAAAATAAAAATTG+AGG - tig0012581:270279-270298 None:intergenic 20.0%
!! ATTGATATTACTGAAAGAAA+GGG + tig0012581:270432-270451 Msa1352350:CDS 20.0%
!!! TTTTATTTTACTTCCATCTA+CGG - tig0012581:270795-270814 None:intergenic 20.0%
!! GAAGTAAAATAAAAGTTGTT+AGG + tig0012581:270801-270820 Msa1352350:CDS 20.0%
!! CTATTTAAAAAAATGTGAAG+TGG - tig0012581:271209-271228 None:intergenic 20.0%
!! TATTTGATCCAATCAAATAA+GGG + tig0012581:271351-271370 Msa1352350:intron 20.0%
!! AATTAAAAGGAATTCAATGA+GGG - tig0012581:271398-271417 None:intergenic 20.0%
!! ATCAAATATTATGAAATGAC+TGG + tig0012581:271451-271470 Msa1352350:intron 20.0%
!!! TTTAAACTAGGCTTTAAATT+AGG + tig0012581:272065-272084 Msa1352350:exon 20.0%
!!! TTAAACTAGGCTTTAAATTA+GGG + tig0012581:272066-272085 Msa1352350:exon 20.0%
!! AGCAATTAAAAAAAATCTTG+TGG + tig0012581:272148-272167 Msa1352350:three_prime_UTR 20.0%
!! AGAAGATATTTACTGAATTT+AGG + tig0012581:272187-272206 Msa1352350:three_prime_UTR 20.0%
!! GAAGATATTTACTGAATTTA+GGG + tig0012581:272188-272207 Msa1352350:three_prime_UTR 20.0%
!! ATATCATCTATCTATAACTA+TGG + tig0012581:272240-272259 Msa1352350:three_prime_UTR 20.0%
!! TATCATCTATCTATAACTAT+GGG + tig0012581:272241-272260 Msa1352350:three_prime_UTR 20.0%
!! CGTTATAATGTATATTTACA+AGG + tig0012581:272337-272356 Msa1352350:three_prime_UTR 20.0%
! AAATCAGTTAGGTTATTCAA+TGG - tig0012581:269017-269036 None:intergenic 25.0%
! CCTAACTAAAAAAATCAGTT+AGG - tig0012581:269028-269047 None:intergenic 25.0%
!!! CCTAACTGATTTTTTTAGTT+AGG + tig0012581:269025-269044 Msa1352350:intron 25.0%
!!! CTGAATAGTTTATTTTGGTT+AGG + tig0012581:269072-269091 Msa1352350:intron 25.0%
!! TCAACACTATGATAAACTTT+TGG - tig0012581:269390-269409 None:intergenic 25.0%
!!! TCTGTCATGAATTTTGTTTA+TGG + tig0012581:269936-269955 Msa1352350:intron 25.0%
!! TGTTTATGGATTTGTTTATC+TGG + tig0012581:269950-269969 Msa1352350:intron 25.0%
! TTTATAGAATTGAGAAATGC+TGG + tig0012581:270037-270056 Msa1352350:CDS 25.0%
! TGTTTGTACTAATATACAAG+TGG + tig0012581:270307-270326 Msa1352350:intron 25.0%
! GATTGATATTACTGAAAGAA+AGG + tig0012581:270431-270450 Msa1352350:CDS 25.0%
! ACAATAGTCAAGTTAGATTT+GGG + tig0012581:270601-270620 Msa1352350:intron 25.0%
! TGTTCATTTGTCTAAATTTC+AGG + tig0012581:270700-270719 Msa1352350:intron 25.0%
!!! TTTATTTTACTTCCATCTAC+GGG - tig0012581:270794-270813 None:intergenic 25.0%
! CCAAAGTTATATTAGGAATA+GGG + tig0012581:271085-271104 Msa1352350:CDS 25.0%
! GTATTTGATCCAATCAAATA+AGG + tig0012581:271350-271369 Msa1352350:intron 25.0%
!! GTAATAATCCCTTATTTGAT+TGG - tig0012581:271362-271381 None:intergenic 25.0%
! CAATTAAAAGGAATTCAATG+AGG - tig0012581:271399-271418 None:intergenic 25.0%
! TATACGGAAAGTCAATTAAA+AGG - tig0012581:271411-271430 None:intergenic 25.0%
!! GAACATTTTCATGGTAAATT+AGG - tig0012581:271481-271500 None:intergenic 25.0%
!! TTTCGAAAAGAACATTTTCA+TGG - tig0012581:271490-271509 None:intergenic 25.0%
!!! TGTTTGTTTCTGTTTTCAAT+AGG + tig0012581:271762-271781 Msa1352350:intron 25.0%
!!! TAAACTAGGCTTTAAATTAG+GGG + tig0012581:272067-272086 Msa1352350:exon 25.0%
! ATATTTACTGAATTTAGGGA+CGG + tig0012581:272192-272211 Msa1352350:three_prime_UTR 25.0%
! GTAAATATACATTATAACGG+TGG - tig0012581:272336-272355 None:intergenic 25.0%
AAATCAGAAGAAGAAAAGAG+AGG + tig0012581:268393-268412 Msa1352350:five_prime_UTR 30.0%
GGATTTGTAATTGTTTGGTT+AGG - tig0012581:268429-268448 None:intergenic 30.0%
TCACTGGATTTGTAATTGTT+TGG - tig0012581:268434-268453 None:intergenic 30.0%
!! TTTCTTAGCTTTTTCCTCAT+CGG - tig0012581:268737-268756 None:intergenic 30.0%
TGAAAGAAACTAACAGTAAC+AGG - tig0012581:268886-268905 None:intergenic 30.0%
!! AAATGAAGGTGATTTGTTGT+TGG + tig0012581:269163-269182 Msa1352350:intron 30.0%
AAACAAAAATTATGCCCACA+TGG - tig0012581:269198-269217 None:intergenic 30.0%
! TAAATGCAGTGATTGGTAAT+TGG - tig0012581:270100-270119 None:intergenic 30.0%
AGTTGAATAAATGCAGTGAT+TGG - tig0012581:270107-270126 None:intergenic 30.0%
CCTTTAAACTCCTTAATTAC+AGG - tig0012581:270408-270427 None:intergenic 30.0%
CCTGTAATTAAGGAGTTTAA+AGG + tig0012581:270405-270424 Msa1352350:CDS 30.0%
CACAATAGTCAAGTTAGATT+TGG + tig0012581:270600-270619 Msa1352350:intron 30.0%
CAATAGTCAAGTTAGATTTG+GGG + tig0012581:270602-270621 Msa1352350:intron 30.0%
TTTGGGGAAAATTATTTGCT+AGG + tig0012581:270618-270637 Msa1352350:intron 30.0%
TCATTTGTCTAAATTTCAGG+AGG + tig0012581:270703-270722 Msa1352350:intron 30.0%
TCTAAATTTCAGGAGGAAAA+GGG + tig0012581:270710-270729 Msa1352350:intron 30.0%
! ATTGAAAGGTATATGATCCT+TGG + tig0012581:270865-270884 Msa1352350:intron 30.0%
AAGGTTAATATTCATCACCA+AGG - tig0012581:270885-270904 None:intergenic 30.0%
TTGTGTTTATAACAGCTTCA+AGG - tig0012581:270912-270931 None:intergenic 30.0%
AATATAACTTTGGCCAGAAA+AGG - tig0012581:271078-271097 None:intergenic 30.0%
! TTTCTGGCCAAAGTTATATT+AGG + tig0012581:271078-271097 Msa1352350:CDS 30.0%
GCCAAAGTTATATTAGGAAT+AGG + tig0012581:271084-271103 Msa1352350:CDS 30.0%
CCCTATTCCTAATATAACTT+TGG - tig0012581:271088-271107 None:intergenic 30.0%
!! ACTAGCCTTATTATTAGCTT+TGG + tig0012581:271274-271293 Msa1352350:intron 30.0%
!! CTAGCCTTATTATTAGCTTT+GGG + tig0012581:271275-271294 Msa1352350:intron 30.0%
CAATCCCAAAGCTAATAATA+AGG - tig0012581:271282-271301 None:intergenic 30.0%
AATTCAATGAGGGTTCAATT+TGG - tig0012581:271388-271407 None:intergenic 30.0%
CGAAAATATGTAATTCACCA+TGG + tig0012581:271505-271524 Msa1352350:intron 30.0%
ATAGTAAACACTAAACTCCA+TGG - tig0012581:271525-271544 None:intergenic 30.0%
AGTGTTTACTATGATGTCTA+TGG + tig0012581:271533-271552 Msa1352350:intron 30.0%
GTGTTTACTATGATGTCTAT+GGG + tig0012581:271534-271553 Msa1352350:intron 30.0%
!!! AAGTTTTGTTGCAAATCACA+AGG + tig0012581:271597-271616 Msa1352350:intron 30.0%
! TGTTTTGCTCTGCATTAAAA+AGG + tig0012581:271735-271754 Msa1352350:intron 30.0%
! TCTGTTTTCAATAGGTAAAC+AGG + tig0012581:271770-271789 Msa1352350:intron 30.0%
! CTGTTTTCAATAGGTAAACA+GGG + tig0012581:271771-271790 Msa1352350:intron 30.0%
!!! ACTTTTTCACTTGAATCACA+GGG - tig0012581:271919-271938 None:intergenic 30.0%
TTCAAGTGAAAAAGTCTTGA+AGG + tig0012581:271924-271943 Msa1352350:CDS 30.0%
AAAATCTTGTGGACTTCTAT+TGG + tig0012581:272159-272178 Msa1352350:three_prime_UTR 30.0%
AAATCTTGTGGACTTCTATT+GGG + tig0012581:272160-272179 Msa1352350:three_prime_UTR 30.0%
AAGATATGACACCTATACAT+AGG - tig0012581:272369-272388 None:intergenic 30.0%
TGAAGGGTTTCAGTTTCTAA+AGG - tig0012581:268538-268557 None:intergenic 35.0%
GTTGGAATTAGAGGTAAACA+AGG - tig0012581:268592-268611 None:intergenic 35.0%
AGAATTGAGGTTGGAATTAG+AGG - tig0012581:268601-268620 None:intergenic 35.0%
CTATTGTTTGTTTCACCAGT+TGG - tig0012581:268790-268809 None:intergenic 35.0%
ACAAACAATAGACGCAGTAA+TGG + tig0012581:268799-268818 Msa1352350:CDS 35.0%
CAGTTAAAGATCGAATCGTT+GGG - tig0012581:269055-269074 None:intergenic 35.0%
TCAGTTAAAGATCGAATCGT+TGG - tig0012581:269056-269075 None:intergenic 35.0%
!!! GTTTGAAGTGTTTTGAGAGA+TGG + tig0012581:269214-269233 Msa1352350:CDS 35.0%
!! TTTGAGAGATGGATTAAGCT+AGG + tig0012581:269225-269244 Msa1352350:CDS 35.0%
CAGTTGTATAAGCAGTATCA+GGG - tig0012581:269425-269444 None:intergenic 35.0%
TCAGTTGTATAAGCAGTATC+AGG - tig0012581:269426-269445 None:intergenic 35.0%
! ACCATTCCGAAAGATCATTT+TGG + tig0012581:269498-269517 Msa1352350:CDS 35.0%
TCCAAAATGATCTTTCGGAA+TGG - tig0012581:269502-269521 None:intergenic 35.0%
ATCGGTCCAAAATGATCTTT+CGG - tig0012581:269507-269526 None:intergenic 35.0%
ACAGTTTGAGAACATGAATG+AGG + tig0012581:269791-269810 Msa1352350:CDS 35.0%
! TGGATTTGTTTATCTGGTTC+AGG + tig0012581:269956-269975 Msa1352350:intron 35.0%
TTTGCAGGTATTTGTTTGTG+AGG + tig0012581:270211-270230 Msa1352350:CDS 35.0%
GTACAAACACACACATACAA+AGG - tig0012581:270296-270315 None:intergenic 35.0%
TTGCTCTGTAGTGATTTATC+AGG + tig0012581:270363-270382 Msa1352350:intron 35.0%
AACTCCTTAATTACAGGTAG+TGG - tig0012581:270402-270421 None:intergenic 35.0%
!! TTCCAACTTTGCTGTTCTAT+AGG + tig0012581:270657-270676 Msa1352350:intron 35.0%
AACCTATAGAACAGCAAAGT+TGG - tig0012581:270662-270681 None:intergenic 35.0%
GTCTAAATTTCAGGAGGAAA+AGG + tig0012581:270709-270728 Msa1352350:intron 35.0%
TGTTAGGCCAAAGACAAAAA+AGG + tig0012581:270817-270836 Msa1352350:CDS 35.0%
!!! AAGGACACCTTTTTTGTCTT+TGG - tig0012581:270827-270846 None:intergenic 35.0%
!! AAAGGTGTCCTTCAAAATCA+AGG + tig0012581:270835-270854 Msa1352350:CDS 35.0%
TGTCCTTCAAAATCAAGGAT+AGG + tig0012581:270840-270859 Msa1352350:CDS 35.0%
! TAGCCTATCCTTGATTTTGA+AGG - tig0012581:270846-270865 None:intergenic 35.0%
ATCAAGGATAGGCTATTGAA+AGG + tig0012581:270851-270870 Msa1352350:CDS 35.0%
ATAACAGCTTCAAGGAAACA+AGG - tig0012581:270904-270923 None:intergenic 35.0%
CTATGTCAGTTGAACAAGTA+GGG - tig0012581:271160-271179 None:intergenic 35.0%
TGATTATCTTCAGAATCCAC+AGG + tig0012581:271181-271200 Msa1352350:CDS 35.0%
ATAGGTAAACAGGGAAATGA+TGG + tig0012581:271780-271799 Msa1352350:intron 35.0%
TAGGTAAACAGGGAAATGAT+GGG + tig0012581:271781-271800 Msa1352350:intron 35.0%
!!! GACTTTTTCACTTGAATCAC+AGG - tig0012581:271920-271939 None:intergenic 35.0%
!! CAAAGCAATGGCTTTAAACT+AGG + tig0012581:272053-272072 Msa1352350:CDS 35.0%
!!! TGGATCGTGCTGTTTTAATT+TGG + tig0012581:272097-272116 Msa1352350:three_prime_UTR 35.0%
CATTATAACGGTGGAAACAT+AGG - tig0012581:272327-272346 None:intergenic 35.0%
CAAGGATATCACCTATGTAT+AGG + tig0012581:272355-272374 Msa1352350:three_prime_UTR 35.0%
! GTTGGTAAAATGTCACTCAC+TGG - tig0012581:268450-268469 None:intergenic 40.0%
TTCCAACCTCAATTCTCGAT+TGG + tig0012581:268605-268624 Msa1352350:CDS 40.0%
TCCAACCTCAATTCTCGATT+GGG + tig0012581:268606-268625 Msa1352350:CDS 40.0%
AAGAAACGACAAGAACTCGT+TGG + tig0012581:268751-268770 Msa1352350:CDS 40.0%
! AACGAACTTGCTCGAATTGT+AGG + tig0012581:269250-269269 Msa1352350:CDS 40.0%
ACTGAGAGAGCAAAGAAAAC+AGG + tig0012581:269441-269460 Msa1352350:CDS 40.0%
GAGAGCAAAGAAAACAGGAA+AGG + tig0012581:269446-269465 Msa1352350:CDS 40.0%
GGATCATTCTCAGCAACAAT+CGG - tig0012581:269525-269544 None:intergenic 40.0%
TTGCTGAGAATGATCCAACA+AGG + tig0012581:269529-269548 Msa1352350:CDS 40.0%
!! GGTTCTTGTTGGTGATACAT+GGG + tig0012581:269560-269579 Msa1352350:CDS 40.0%
! GTTATCCTGTTCGTGTTGTT+AGG + tig0012581:269838-269857 Msa1352350:CDS 40.0%
AAGCAGGAGTGAGATATGAT+GGG + tig0012581:270013-270032 Msa1352350:CDS 40.0%
ATGGGGATCTTTCTGTGATA+GGG + tig0012581:270180-270199 Msa1352350:intron 40.0%
CTTTCTGTGATAGGGTCATA+AGG + tig0012581:270188-270207 Msa1352350:intron 40.0%
ACTAAAACCAACCTTGTCCA+TGG - tig0012581:270255-270274 None:intergenic 40.0%
!! TTAATTACAGGTAGTGGACG+GGG - tig0012581:270396-270415 None:intergenic 40.0%
!! CTTAATTACAGGTAGTGGAC+GGG - tig0012581:270397-270416 None:intergenic 40.0%
!! CCTTAATTACAGGTAGTGGA+CGG - tig0012581:270398-270417 None:intergenic 40.0%
AAAGAAAGGGTGATCCATCA+TGG + tig0012581:270445-270464 Msa1352350:CDS 40.0%
AAGAAAGGGTGATCCATCAT+GGG + tig0012581:270446-270465 Msa1352350:CDS 40.0%
CTTACATCAAAGTCCCATGA+TGG - tig0012581:270462-270481 None:intergenic 40.0%
TCATGGGACTTTGATGTAAG+TGG + tig0012581:270462-270481 Msa1352350:intron 40.0%
! GCTGTTCTATAGGTTTTGCA+TGG + tig0012581:270667-270686 Msa1352350:intron 40.0%
!! TTCACTGGCTTCTTACTTAG+AGG - tig0012581:270761-270780 None:intergenic 40.0%
ACTCTGCAAACACAATGACA+TGG - tig0012581:270968-270987 None:intergenic 40.0%
GTCATTGTGTTTGCAGAGTT+CGG + tig0012581:270969-270988 Msa1352350:intron 40.0%
CAATATATGTCGCAAGGTGT+TGG + tig0012581:270995-271014 Msa1352350:CDS 40.0%
GCTATGTCAGTTGAACAAGT+AGG - tig0012581:271161-271180 None:intergenic 40.0%
AAAATGTGAAGTGGTACCTG+TGG - tig0012581:271200-271219 None:intergenic 40.0%
CAATGAGGGTTCAATTTGGA+GGG - tig0012581:271384-271403 None:intergenic 40.0%
TCAATGAGGGTTCAATTTGG+AGG - tig0012581:271385-271404 None:intergenic 40.0%
TGAAAATCTCAAGCCAGATG+AGG + tig0012581:271876-271895 Msa1352350:CDS 40.0%
ATCTGAATCCTCCACAGAAA+CGG + tig0012581:271962-271981 Msa1352350:CDS 40.0%
AAACGTAGGAAGCAAAGCAA+TGG + tig0012581:272041-272060 Msa1352350:CDS 40.0%
!! ACTAGGCTTTAAATTAGGGG+TGG + tig0012581:272070-272089 Msa1352350:exon 40.0%
!! CTAGGCTTTAAATTAGGGGT+GGG + tig0012581:272071-272090 Msa1352350:exon 40.0%
TTTAAATTAGGGGTGGGTGA+TGG + tig0012581:272077-272096 Msa1352350:three_prime_UTR 40.0%
GTCATCTGTTAAACGTGTGA+AGG + tig0012581:272265-272284 Msa1352350:three_prime_UTR 40.0%
!! GCTTCGACATTTGGATTGGT+TGG - tig0012581:268468-268487 None:intergenic 45.0%
AGCTGCTTCGACATTTGGAT+TGG - tig0012581:268472-268491 None:intergenic 45.0%
AAGGTAGCTGCTTCGACATT+TGG - tig0012581:268477-268496 None:intergenic 45.0%
TGCGCATGTTCGACAATGAA+GGG - tig0012581:268554-268573 None:intergenic 45.0%
TTGCGCATGTTCGACAATGA+AGG - tig0012581:268555-268574 None:intergenic 45.0%
GGTAAACAAGGAACATGCCA+CGG - tig0012581:268580-268599 None:intergenic 45.0%
TCCCAATCGAGAATTGAGGT+TGG - tig0012581:268610-268629 None:intergenic 45.0%
GCATTCCCAATCGAGAATTG+AGG - tig0012581:268614-268633 None:intergenic 45.0%
! AATGGCGGAAACTAGATCTC+CGG - tig0012581:268686-268705 None:intergenic 45.0%
! AAGCGAAGCATCATTCTCGA+TGG - tig0012581:268713-268732 None:intergenic 45.0%
AAACGACAAGAACTCGTTGG+TGG + tig0012581:268754-268773 Msa1352350:CDS 45.0%
AACGACAAGAACTCGTTGGT+GGG + tig0012581:268755-268774 Msa1352350:CDS 45.0%
! GGCTTGCTTGATATCTTCGA+CGG + tig0012581:268820-268839 Msa1352350:CDS 45.0%
CTAACAGTAACAGGTCTCTC+AGG - tig0012581:268877-268896 None:intergenic 45.0%
!! TGTTGGTTTCAGACACCATG+TGG + tig0012581:269180-269199 Msa1352350:intron 45.0%
! GTTGGTTTCAGACACCATGT+GGG + tig0012581:269181-269200 Msa1352350:intron 45.0%
GACTGCAATTCCAGCGAAAA+TGG + tig0012581:269272-269291 Msa1352350:CDS 45.0%
!! CGCATTGATTCGTGGATTAC+TGG - tig0012581:269298-269317 None:intergenic 45.0%
GAAAGGCAAATGCTTGCAGT+GGG + tig0012581:269463-269482 Msa1352350:CDS 45.0%
AATGATCCAACAAGGAACCG+TGG + tig0012581:269537-269556 Msa1352350:CDS 45.0%
ATGATCCAACAAGGAACCGT+GGG + tig0012581:269538-269557 Msa1352350:CDS 45.0%
TATCACCAACAAGAACCCCA+CGG - tig0012581:269557-269576 None:intergenic 45.0%
!! GGGTTCTTGTTGGTGATACA+TGG + tig0012581:269559-269578 Msa1352350:CDS 45.0%
!! TCTTGTTGGTGATACATGGG+AGG + tig0012581:269563-269582 Msa1352350:CDS 45.0%
! TTGGTGATACATGGGAGGAT+AGG + tig0012581:269568-269587 Msa1352350:CDS 45.0%
TGATACATGGGAGGATAGGA+TGG + tig0012581:269572-269591 Msa1352350:CDS 45.0%
!! ATAGGATGGACTGTAGGCAA+TGG + tig0012581:269586-269605 Msa1352350:CDS 45.0%
!! TAGGATGGACTGTAGGCAAT+GGG + tig0012581:269587-269606 Msa1352350:CDS 45.0%
ATTGCTGGTCAGAGTACACA+CGG + tig0012581:269636-269655 Msa1352350:CDS 45.0%
GGCTCAATCTGTTGCACTTT+CGG + tig0012581:269659-269678 Msa1352350:CDS 45.0%
GCTCAATCTGTTGCACTTTC+GGG + tig0012581:269660-269679 Msa1352350:CDS 45.0%
CTCAGACTGAGTTGTCGAAA+AGG + tig0012581:269816-269835 Msa1352350:CDS 45.0%
ACAGACCTAACAACACGAAC+AGG - tig0012581:269846-269865 None:intergenic 45.0%
AGCAGAACGTTTCTCCTTGT+GGG - tig0012581:269983-270002 None:intergenic 45.0%
AAGCAGAACGTTTCTCCTTG+TGG - tig0012581:269984-270003 None:intergenic 45.0%
GAAACGTTCTGCTTATGCAC+CGG + tig0012581:269990-270009 Msa1352350:CDS 45.0%
TCATATCTCACTCCTGCTTC+CGG - tig0012581:270012-270031 None:intergenic 45.0%
GAAGCAGGAGTGAGATATGA+TGG + tig0012581:270012-270031 Msa1352350:CDS 45.0%
AGCAGGAGTGAGATATGATG+GGG + tig0012581:270014-270033 Msa1352350:CDS 45.0%
GAGAAATGCTGGCGCAAAAT+TGG + tig0012581:270048-270067 Msa1352350:CDS 45.0%
GATGGGGATCTTTCTGTGAT+AGG + tig0012581:270179-270198 Msa1352350:intron 45.0%
GATAGGGTCATAAGGTTTGC+AGG + tig0012581:270196-270215 Msa1352350:intron 45.0%
CCGTCCACTACCTGTAATTA+AGG + tig0012581:270395-270414 Msa1352350:CDS 45.0%
! ACTGGCTTCTTACTTAGAGG+TGG - tig0012581:270758-270777 None:intergenic 45.0%
AACCTTGTAGATCCCGTAGA+TGG + tig0012581:270779-270798 Msa1352350:CDS 45.0%
TTCCATCTACGGGATCTACA+AGG - tig0012581:270784-270803 None:intergenic 45.0%
CGGTTGCAATATATGTCGCA+AGG + tig0012581:270989-271008 Msa1352350:CDS 45.0%
TTGCAGAAGTTGTGAGCACA+AGG - tig0012581:271038-271057 None:intergenic 45.0%
CATAGAATCACTCCAGCAAC+AGG + tig0012581:271807-271826 Msa1352350:CDS 45.0%
CATATTGACGAGGCAAACGT+AGG + tig0012581:272027-272046 Msa1352350:CDS 45.0%
!! AGAATAATAATAATTATATA+CGG - tig0012581:271427-271446 None:intergenic 5.0%
ACACGCCATGCAAACACCAT+CGG - tig0012581:268506-268525 None:intergenic 50.0%
ACTAGATCTCCGGCGATAGA+TGG - tig0012581:268676-268695 None:intergenic 50.0%
ATCATTCTCGATGGCGCGAA+TGG - tig0012581:268704-268723 None:intergenic 50.0%
TGATGCTTCGCTTACCGATG+AGG + tig0012581:268720-268739 Msa1352350:CDS 50.0%
ACGACAAGAACTCGTTGGTG+GGG + tig0012581:268756-268775 Msa1352350:CDS 50.0%
CTCAGGCAAATGCATGCAGA+AGG - tig0012581:268860-268879 None:intergenic 50.0%
!! GGATTACTGGCCATTTTCGC+TGG - tig0012581:269285-269304 None:intergenic 50.0%
TCCACGAATCAATGCGCAGT+TGG + tig0012581:269302-269321 Msa1352350:CDS 50.0%
GTTGGCGATTGCGATTCGTA+TGG + tig0012581:269320-269339 Msa1352350:CDS 50.0%
GATTGCGATTCGTATGGCCA+AGG + tig0012581:269326-269345 Msa1352350:CDS 50.0%
GGAAAGGCAAATGCTTGCAG+TGG + tig0012581:269462-269481 Msa1352350:CDS 50.0%
TGATCCAACAAGGAACCGTG+GGG + tig0012581:269539-269558 Msa1352350:CDS 50.0%
!! AGGATGGACTGTAGGCAATG+GGG + tig0012581:269588-269607 Msa1352350:CDS 50.0%
TTGCTGGTCAGAGTACACAC+GGG + tig0012581:269637-269656 Msa1352350:CDS 50.0%
CAATCTGTTGCACTTTCGGG+TGG + tig0012581:269663-269682 Msa1352350:CDS 50.0%
TACGTCGATGATGAGGACCA+CGG + tig0012581:269687-269706 Msa1352350:CDS 50.0%
TGTAAAGGAACCACTCACCG+TGG - tig0012581:269707-269726 None:intergenic 50.0%
CGGTGAGTGGTTCCTTTACA+CGG + tig0012581:269707-269726 Msa1352350:CDS 50.0%
GGTGAGTGGTTCCTTTACAC+GGG + tig0012581:269708-269727 Msa1352350:CDS 50.0%
TGGTTCCTTTACACGGGAAG+TGG + tig0012581:269714-269733 Msa1352350:CDS 50.0%
GGTTCCTTTACACGGGAAGT+GGG + tig0012581:269715-269734 Msa1352350:CDS 50.0%
GTTCCTTTACACGGGAAGTG+GGG + tig0012581:269716-269735 Msa1352350:CDS 50.0%
TTCCTTTACACGGGAAGTGG+GGG + tig0012581:269717-269736 Msa1352350:CDS 50.0%
! TATCTGGTTCAGGTCCCACA+AGG + tig0012581:269966-269985 Msa1352350:intron 50.0%
TTCAGGAGGAAAAGGGCTGT+TGG + tig0012581:270717-270736 Msa1352350:intron 50.0%
! AGGAAAAGGGCTGTTGGTTG+TGG + tig0012581:270723-270742 Msa1352350:CDS 50.0%
GGCTTCTTACTTAGAGGTGG+AGG - tig0012581:270755-270774 None:intergenic 50.0%
ACGGGATCTACAAGGTTCAC+TGG - tig0012581:270776-270795 None:intergenic 50.0%
CAACTTCTGCAAAGCTTGCC+TGG + tig0012581:271046-271065 Msa1352350:CDS 50.0%
TTCTGCAAAGCTTGCCTGGA+GGG + tig0012581:271050-271069 Msa1352350:CDS 50.0%
! AGGAATAGGGCATCTCAGAG+TGG + tig0012581:271098-271117 Msa1352350:CDS 50.0%
! TCTTTTGTGTCCGCAAAGCG+CGG - tig0012581:271124-271143 None:intergenic 50.0%
GAAACCTCTGTCTCCTCATC+TGG - tig0012581:271892-271911 None:intergenic 50.0%
TGAATCCTCCACAGAAACGG+AGG + tig0012581:271965-271984 Msa1352350:CDS 50.0%
CACGGAGGAACATATTGACG+AGG + tig0012581:272017-272036 Msa1352350:CDS 50.0%
CAAACACCATCGGCGTCACA+AGG - tig0012581:268496-268515 None:intergenic 55.0%
TGACGCCGATGGTGTTTGCA+TGG + tig0012581:268498-268517 Msa1352350:CDS 55.0%
!! GGCGACGGGTTGAGAACAAT+CGG - tig0012581:268638-268657 None:intergenic 55.0%
GATTGTTCTCAACCCGTCGC+CGG + tig0012581:268637-268656 Msa1352350:CDS 55.0%
ATTCTCGATGGCGCGAATGG+CGG - tig0012581:268701-268720 None:intergenic 55.0%
GGTGGGGCTTCTAATCCAAC+TGG + tig0012581:268772-268791 Msa1352350:CDS 55.0%
!! GCCAACTGCGCATTGATTCG+TGG - tig0012581:269306-269325 None:intergenic 55.0%
GCCAAGGTAGCAAGATCGCA+GGG + tig0012581:269342-269361 Msa1352350:CDS 55.0%
ACCCTGCGATCTTGCTACCT+TGG - tig0012581:269346-269365 None:intergenic 55.0%
AAGGTAGCAAGATCGCAGGG+TGG + tig0012581:269345-269364 Msa1352350:CDS 55.0%
AGAACCCCACGGTTCCTTGT+TGG - tig0012581:269546-269565 None:intergenic 55.0%
AGGAACCGTGGGGTTCTTGT+TGG + tig0012581:269549-269568 Msa1352350:CDS 55.0%
!! GGGAGGATAGGATGGACTGT+AGG + tig0012581:269580-269599 Msa1352350:CDS 55.0%
ACCAGCAATGCCAGCCACAT+GGG - tig0012581:269625-269644 None:intergenic 55.0%
TGCTGGTCAGAGTACACACG+GGG + tig0012581:269638-269657 Msa1352350:CDS 55.0%
GGGTGGTTACGTCGATGATG+AGG + tig0012581:269680-269699 Msa1352350:CDS 55.0%
ATGATGAGGACCACGGTGAG+TGG + tig0012581:269694-269713 Msa1352350:CDS 55.0%
TCCTTTACACGGGAAGTGGG+GGG + tig0012581:269718-269737 Msa1352350:CDS 55.0%
TCTGCTTATGCACCGGAAGC+AGG + tig0012581:269997-270016 Msa1352350:CDS 55.0%
GTGACAATGAGCCAGCTCCA+TGG + tig0012581:270235-270254 Msa1352350:CDS 55.0%
ATGAGCCAGCTCCATGGACA+AGG + tig0012581:270241-270260 Msa1352350:CDS 55.0%
ACCAACCTTGTCCATGGAGC+TGG - tig0012581:270249-270268 None:intergenic 55.0%
!! TTACAGGTAGTGGACGGGGA+CGG - tig0012581:270392-270411 None:intergenic 55.0%
TGAGCACAAGGCGTAGTGAG+AGG - tig0012581:271026-271045 None:intergenic 55.0%
CTTCTGCAAAGCTTGCCTGG+AGG + tig0012581:271049-271068 Msa1352350:CDS 55.0%
CCATCTGTTCAGCCTGTTGC+TGG - tig0012581:271822-271841 None:intergenic 55.0%
CCAGCAACAGGCTGAACAGA+TGG + tig0012581:271819-271838 Msa1352350:CDS 55.0%
GCAACAGGCTGAACAGATGG+AGG + tig0012581:271822-271841 Msa1352350:CDS 55.0%
CAAGCCAGATGAGGAGACAG+AGG + tig0012581:271885-271904 Msa1352350:CDS 55.0%
CCTTTCCTCCGTTTCTGTGG+AGG - tig0012581:271973-271992 None:intergenic 55.0%
CCTCCACAGAAACGGAGGAA+AGG + tig0012581:271970-271989 Msa1352350:CDS 55.0%
GCACCTTTCCTCCGTTTCTG+TGG - tig0012581:271976-271995 None:intergenic 55.0%
! CAGAAACGGAGGAAAGGTGC+TGG + tig0012581:271976-271995 Msa1352350:CDS 55.0%
!! AAACGGAGGAAAGGTGCTGG+TGG + tig0012581:271979-271998 Msa1352350:CDS 55.0%
CAGCTACCTTGTGACGCCGA+TGG + tig0012581:268487-268506 Msa1352350:CDS 60.0%
GTCGAACATGCGCAACTCCG+TGG + tig0012581:268560-268579 Msa1352350:CDS 60.0%
AGATGGAGCAGCGGAATCGC+CGG - tig0012581:268659-268678 None:intergenic 60.0%
TCCGCTGCTCCATCTATCGC+CGG + tig0012581:268664-268683 Msa1352350:CDS 60.0%
TCCGGCGATAGATGGAGCAG+CGG - tig0012581:268668-268687 None:intergenic 60.0%
GGCCAAGGTAGCAAGATCGC+AGG + tig0012581:269341-269360 Msa1352350:CDS 60.0%
GCAAGATCGCAGGGTGGTGT+TGG + tig0012581:269351-269370 Msa1352350:CDS 60.0%
! AGATCGCAGGGTGGTGTTGG+AGG + tig0012581:269354-269373 Msa1352350:CDS 60.0%
GGGAGCTCACTTTCCCCATG+TGG + tig0012581:269608-269627 Msa1352350:CDS 60.0%
GCTCACTTTCCCCATGTGGC+TGG + tig0012581:269612-269631 Msa1352350:CDS 60.0%
CCAGCAATGCCAGCCACATG+GGG - tig0012581:269624-269643 None:intergenic 60.0%
GACCAGCAATGCCAGCCACA+TGG - tig0012581:269626-269645 None:intergenic 60.0%
TCCCCCCACTTCCCGTGTAA+AGG - tig0012581:269722-269741 None:intergenic 60.0%
AGTGGGGGGAGAGATCTCAG+CGG + tig0012581:269732-269751 Msa1352350:CDS 60.0%
GCCAGCTCCATGGACAAGGT+TGG + tig0012581:270245-270264 Msa1352350:intron 60.0%
!!! TGCCTGGAGGGTGCCTTTTC+TGG + tig0012581:271062-271081 Msa1352350:CDS 60.0%
!! GAGGAAAGGTGCTGGTGGCA+AGG + tig0012581:271984-272003 Msa1352350:CDS 60.0%
CCCCATGTGGCTGGCATTGC+TGG + tig0012581:269621-269640 Msa1352350:CDS 65.0%
!! GGCCAGAAAAGGCACCCTCC+AGG - tig0012581:271067-271086 None:intergenic 65.0%
CTCAGAGTGGCCGCGCTTTG+CGG + tig0012581:271111-271130 Msa1352350:CDS 65.0%
!! AGGTGCTGGTGGCAAGGCTG+CGG + tig0012581:271990-272009 Msa1352350:CDS 65.0%
TGGCAAGGCTGCGGCGAACA+CGG + tig0012581:271999-272018 Msa1352350:CDS 65.0%
AGCAGCGGAATCGCCGGCGA+CGG - tig0012581:268653-268672 None:intergenic 70.0%
CAAGGCTGCGGCGAACACGG+AGG + tig0012581:272002-272021 Msa1352350:CDS 70.0%
GCAGCGGAATCGCCGGCGAC+GGG - tig0012581:268652-268671 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0012581 gene 268377 272395 268377 ID=Msa1352350;Name=Msa1352350
tig0012581 mRNA 268377 272395 268377 ID=Msa1352350-mRNA-1;Parent=Msa1352350;Name=Msa1352350-mRNA-1;_AED=0.07;_eAED=0.07;_QI=101|1|1|1|1|1|8|321|668
tig0012581 exon 268377 268891 268377 ID=Msa1352350-mRNA-1:exon:8077;Parent=Msa1352350-mRNA-1
tig0012581 exon 269192 269859 269192 ID=Msa1352350-mRNA-1:exon:8078;Parent=Msa1352350-mRNA-1
tig0012581 exon 269978 270077 269978 ID=Msa1352350-mRNA-1:exon:8079;Parent=Msa1352350-mRNA-1
tig0012581 exon 270201 270262 270201 ID=Msa1352350-mRNA-1:exon:8080;Parent=Msa1352350-mRNA-1
tig0012581 exon 270374 270476 270374 ID=Msa1352350-mRNA-1:exon:8081;Parent=Msa1352350-mRNA-1
tig0012581 exon 270722 270872 270722 ID=Msa1352350-mRNA-1:exon:8082;Parent=Msa1352350-mRNA-1
tig0012581 exon 270985 271202 270985 ID=Msa1352350-mRNA-1:exon:8083;Parent=Msa1352350-mRNA-1
tig0012581 exon 271784 272395 271784 ID=Msa1352350-mRNA-1:exon:8084;Parent=Msa1352350-mRNA-1
tig0012581 five_prime_UTR 268377 268477 268377 ID=Msa1352350-mRNA-1:five_prime_utr;Parent=Msa1352350-mRNA-1
tig0012581 CDS 268478 268891 268478 ID=Msa1352350-mRNA-1:cds;Parent=Msa1352350-mRNA-1
tig0012581 CDS 269192 269859 269192 ID=Msa1352350-mRNA-1:cds;Parent=Msa1352350-mRNA-1
tig0012581 CDS 269978 270077 269978 ID=Msa1352350-mRNA-1:cds;Parent=Msa1352350-mRNA-1
tig0012581 CDS 270201 270262 270201 ID=Msa1352350-mRNA-1:cds;Parent=Msa1352350-mRNA-1
tig0012581 CDS 270374 270476 270374 ID=Msa1352350-mRNA-1:cds;Parent=Msa1352350-mRNA-1
tig0012581 CDS 270722 270872 270722 ID=Msa1352350-mRNA-1:cds;Parent=Msa1352350-mRNA-1
tig0012581 CDS 270985 271202 270985 ID=Msa1352350-mRNA-1:cds;Parent=Msa1352350-mRNA-1
tig0012581 CDS 271784 272074 271784 ID=Msa1352350-mRNA-1:cds;Parent=Msa1352350-mRNA-1
tig0012581 three_prime_UTR 272075 272395 272075 ID=Msa1352350-mRNA-1:three_prime_utr;Parent=Msa1352350-mRNA-1
Gene Sequence

>Msa1352350

ATGTCGAAGCAGCTACCTTGTGACGCCGATGGTGTTTGCATGGCGTGTAAAACGAAGCCTTTAGAAACTGAAACCCTTCATTGTCGAACATGCGCAACTCCGTGGCATGTTCCTTGTTTACCTCTAATTCCAACCTCAATTCTCGATTGGGAATGCTCCGATTGTTCTCAACCCGTCGCCGGCGATTCCGCTGCTCCATCTATCGCCGGAGATCTAGTTTCCGCCATTCGCGCCATCGAGAATGATGCTTCGCTTACCGATGAGGAAAAAGCTAAGAAACGACAAGAACTCGTTGGTGGGGCTTCTAATCCAACTGGTGAAACAAACAATAGACGCAGTAATGGCTTGCTTGATATCTTCGACGGTAGTCTCAACTGTTCCTTCTGCATGCATTTGCCTGAGAGACCTGTTACTACACCATGTGGGCATAATTTTTGTTTGAAGTGTTTTGAGAGATGGATTAAGCTAGGAAAACGAACTTGCTCGAATTGTAGGACTGCAATTCCAGCGAAAATGGCCAGTAATCCACGAATCAATGCGCAGTTGGCGATTGCGATTCGTATGGCCAAGGTAGCAAGATCGCAGGGTGGTGTTGGAGGAAGTAGCGTTCCAAAAGTTTATCATAGTGTTGACAATGATGAGCGCCCTGATACTGCTTATACAACTGAGAGAGCAAAGAAAACAGGAAAGGCAAATGCTTGCAGTGGGAAGATATTTGTGACCATTCCGAAAGATCATTTTGGACCGATTGTTGCTGAGAATGATCCAACAAGGAACCGTGGGGTTCTTGTTGGTGATACATGGGAGGATAGGATGGACTGTAGGCAATGGGGAGCTCACTTTCCCCATGTGGCTGGCATTGCTGGTCAGAGTACACACGGGGCTCAATCTGTTGCACTTTCGGGTGGTTACGTCGATGATGAGGACCACGGTGAGTGGTTCCTTTACACGGGAAGTGGGGGGAGAGATCTCAGCGGTAATAAACGTACAAACAAAAATCAGTCTTTTGATCAACAGTTTGAGAACATGAATGAGGCTCTCAGACTGAGTTGTCGAAAAGGTTATCCTGTTCGTGTTGTTAGGTCCCACAAGGAGAAACGTTCTGCTTATGCACCGGAAGCAGGAGTGAGATATGATGGGGTTTATAGAATTGAGAAATGCTGGCGCAAAATTGGAATACAAGGTCATAAGGTTTGCAGGTATTTGTTTGTGAGGTGTGACAATGAGCCAGCTCCATGGACAAGTGATTTATCAGGAGACCGTCCCCGTCCACTACCTGTAATTAAGGAGTTTAAAGGTGCGATTGATATTACTGAAAGAAAGGGTGATCCATCATGGGACTTTGATGAGGAAAAGGGCTGTTGGTTGTGGAAGAAGCCTCCACCTCTAAGTAAGAAGCCAGTGAACCTTGTAGATCCCGTAGATGGAAGTAAAATAAAAGTTGTTAGGCCAAAGACAAAAAAGGTGTCCTTCAAAATCAAGGATAGGCTATTGAAAGAGTTCGGTTGCAATATATGTCGCAAGGTGTTGGCTTCGCCTCTCACTACGCCTTGTGCTCACAACTTCTGCAAAGCTTGCCTGGAGGGTGCCTTTTCTGGCCAAAGTTATATTAGGAATAGGGCATCTCAGAGTGGCCGCGCTTTGCGGACACAAAAGAACATTATGAAATGCCCTACTTGTTCAACTGACATAGCTGATTATCTTCAGAATCCACAGGTAAACAGGGAAATGATGGGTGTCATAGAATCACTCCAGCAACAGGCTGAACAGATGGAGGAGAGTTCTGAAGAATCAAGTGCAAAAAGTGATGAAAATCTCAAGCCAGATGAGGAGACAGAGGTTTCAAAGCCCTGTGATTCAAGTGAAAAAGTCTTGAAGGAAATTAACAAGAATGATCTGAATCCTCCACAGAAACGGAGGAAAGGTGCTGGTGGCAAGGCTGCGGCGAACACGGAGGAACATATTGACGAGGCAAACGTAGGAAGCAAAGCAATGGCTTTAAACTAG
Protein sequence

>Msa1352350

MSKQLPCDADGVCMACKTKPLETETLHCRTCATPWHVPCLPLIPTSILDWECSDCSQPVAGDSAAPSIAGDLVSAIRAIENDASLTDEEKAKKRQELVGGASNPTGETNNRRSNGLLDIFDGSLNCSFCMHLPERPVTTPCGHNFCLKCFERWIKLGKRTCSNCRTAIPAKMASNPRINAQLAIAIRMAKVARSQGGVGGSSVPKVYHSVDNDERPDTAYTTERAKKTGKANACSGKIFVTIPKDHFGPIVAENDPTRNRGVLVGDTWEDRMDCRQWGAHFPHVAGIAGQSTHGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKNQSFDQQFENMNEALRLSCRKGYPVRVVRSHKEKRSAYAPEAGVRYDGVYRIEKCWRKIGIQGHKVCRYLFVRCDNEPAPWTSDLSGDRPRPLPVIKEFKGAIDITERKGDPSWDFDEEKGCWLWKKPPPLSKKPVNLVDPVDGSKIKVVRPKTKKVSFKIKDRLLKEFGCNICRKVLASPLTTPCAHNFCKACLEGAFSGQSYIRNRASQSGRALRTQKNIMKCPTCSTDIADYLQNPQVNREMMGVIESLQQQAEQMEESSEESSAKSDENLKPDEETEVSKPCDSSEKVLKEINKNDLNPPQKRRKGAGGKAAANTEEHIDEANVGSKAMALN*