Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106320 | XP_013466657.1 | 97.416 | 658 | 17 | 0 | 1 | 658 | 1 | 658 | 0.0 | 1330 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106320 | sp|Q9ZT92|AK10B_ARATH | 31.283 | 569 | 328 | 16 | 46 | 597 | 47 | 569 | 2.01e-63 | 223 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106320 | A0A072VGX6 | 97.416 | 658 | 17 | 0 | 1 | 658 | 1 | 658 | 0.0 | 1330 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000880 | Msa0106320 | 0.809026 | 2.318845e-50 | -8.615850e-47 |
| Msa0001680 | Msa0106320 | 0.822824 | 1.926775e-53 | -8.615850e-47 |
| Msa0002680 | Msa0106320 | 0.836225 | 1.059904e-56 | -8.615850e-47 |
| Msa0002710 | Msa0106320 | 0.806131 | 9.549024e-50 | -8.615850e-47 |
| Msa0012940 | Msa0106320 | 0.938583 | 5.296999e-99 | -8.615850e-47 |
| Msa0035120 | Msa0106320 | 0.807203 | 5.670052e-50 | -8.615850e-47 |
| Msa0046830 | Msa0106320 | 0.847078 | 1.451726e-59 | -8.615850e-47 |
| Msa0052870 | Msa0106320 | 0.834205 | 3.428379e-56 | -8.615850e-47 |
| Msa0077340 | Msa0106320 | 0.806904 | 6.557439e-50 | -8.615850e-47 |
| Msa0081520 | Msa0106320 | 0.800413 | 1.457976e-48 | -8.615850e-47 |
| Msa0093850 | Msa0106320 | 0.867324 | 1.488673e-65 | -8.615850e-47 |
| Msa0098470 | Msa0106320 | 0.829529 | 4.892518e-55 | -8.615850e-47 |
| Msa0106320 | Msa0106620 | 0.840922 | 6.494593e-58 | -8.615850e-47 |
| Msa0106320 | Msa0106710 | 0.818590 | 1.810295e-52 | -8.615850e-47 |
| Msa0106320 | Msa0116790 | 0.806896 | 6.582787e-50 | -8.615850e-47 |
| Msa0106320 | Msa0130110 | 0.816865 | 4.436543e-52 | -8.615850e-47 |
| Msa0106320 | Msa0138360 | 0.849259 | 3.626095e-60 | -8.615850e-47 |
| Msa0106320 | Msa0138750 | 0.805707 | 1.171999e-49 | -8.615850e-47 |
| Msa0106320 | Msa0141400 | 0.816166 | 6.361863e-52 | -8.615850e-47 |
| Msa0106320 | Msa0144360 | 0.823776 | 1.154752e-53 | -8.615850e-47 |
| Msa0106320 | Msa0146280 | 0.800387 | 1.475898e-48 | -8.615850e-47 |
| Msa0106320 | Msa0147980 | 0.830153 | 3.446586e-55 | -8.615850e-47 |
| Msa0106320 | Msa0152870 | 0.909974 | 3.143183e-82 | -8.615850e-47 |
| Msa0106320 | Msa0168870 | 0.806676 | 7.327948e-50 | -8.615850e-47 |
| Msa0106320 | Msa0173890 | 0.814459 | 1.524240e-51 | -8.615850e-47 |
| Msa0106320 | Msa0188690 | 0.817250 | 3.634543e-52 | -8.615850e-47 |
| Msa0106320 | Msa0192480 | 0.831914 | 1.273915e-55 | -8.615850e-47 |
| Msa0106320 | Msa0209140 | 0.810954 | 8.913738e-51 | -8.615850e-47 |
| Msa0106320 | Msa0221480 | 0.805687 | 1.183473e-49 | -8.615850e-47 |
| Msa0106320 | Msa0223230 | 0.836866 | 7.277957e-57 | -8.615850e-47 |
| Msa0106320 | Msa0225480 | 0.826534 | 2.573913e-54 | -8.615850e-47 |
| Msa0106320 | Msa0241830 | 0.828414 | 9.110243e-55 | -8.615850e-47 |
| Msa0106320 | Msa0249540 | 0.828573 | 8.340463e-55 | -8.615850e-47 |
| Msa0106320 | Msa0261170 | 0.819575 | 1.080628e-52 | -8.615850e-47 |
| Msa0106320 | Msa0270210 | 0.821851 | 3.240633e-53 | -8.615850e-47 |
| Msa0106320 | Msa0279850 | 0.821740 | 3.437751e-53 | -8.615850e-47 |
| Msa0106320 | Msa0281470 | 0.830662 | 2.588142e-55 | -8.615850e-47 |
| Msa0106320 | Msa0296250 | 0.813809 | 2.120460e-51 | -8.615850e-47 |
| Msa0106320 | Msa0300320 | 0.806657 | 7.395217e-50 | -8.615850e-47 |
| Msa0106320 | Msa0305780 | 0.802540 | 5.345438e-49 | -8.615850e-47 |
| Msa0106320 | Msa0307270 | 0.838724 | 2.425821e-57 | -8.615850e-47 |
| Msa0106320 | Msa0307570 | 0.833461 | 5.263759e-56 | -8.615850e-47 |
| Msa0106320 | Msa0307850 | 0.813056 | 3.104379e-51 | -8.615850e-47 |
| Msa0106320 | Msa0312360 | 0.800618 | 1.324325e-48 | -8.615850e-47 |
| Msa0106320 | Msa0322900 | 0.833273 | 5.862459e-56 | -8.615850e-47 |
| Msa0106320 | Msa0341690 | 0.854670 | 1.054540e-61 | -8.615850e-47 |
| Msa0106320 | Msa0388990 | 0.828667 | 7.913786e-55 | -8.615850e-47 |
| Msa0106320 | Msa0434570 | 0.813670 | 2.276224e-51 | -8.615850e-47 |
| Msa0106320 | Msa0434770 | 0.808595 | 2.866658e-50 | -8.615850e-47 |
| Msa0106320 | Msa0435370 | 0.851403 | 9.079617e-61 | -8.615850e-47 |
| Msa0106320 | Msa0435420 | 0.846937 | 1.586783e-59 | -8.615850e-47 |
| Msa0106320 | Msa0435570 | 0.840223 | 9.897474e-58 | -8.615850e-47 |
| Msa0106320 | Msa0479200 | 0.821696 | 3.519403e-53 | -8.615850e-47 |
| Msa0106320 | Msa0518030 | 0.853633 | 2.099784e-61 | -8.615850e-47 |
| Msa0106320 | Msa0519760 | 0.806979 | 6.321640e-50 | -8.615850e-47 |
| Msa0106320 | Msa0519810 | 0.807280 | 5.458796e-50 | -8.615850e-47 |
| Msa0106320 | Msa0519840 | 0.811641 | 6.325772e-51 | -8.615850e-47 |
| Msa0106320 | Msa0527190 | 0.843067 | 1.760103e-58 | -8.615850e-47 |
| Msa0106320 | Msa0531250 | 0.805631 | 1.216342e-49 | -8.615850e-47 |
| Msa0106320 | Msa0556010 | 0.846549 | 2.025615e-59 | -8.615850e-47 |
| Msa0106320 | Msa0581690 | 0.840849 | 6.787576e-58 | -8.615850e-47 |
| Msa0106320 | Msa0582480 | 0.800591 | 1.341653e-48 | -8.615850e-47 |
| Msa0106320 | Msa0607520 | 0.800900 | 1.160074e-48 | -8.615850e-47 |
| Msa0106320 | Msa0626270 | 0.812836 | 3.469591e-51 | -8.615850e-47 |
| Msa0106320 | Msa0626450 | 0.813520 | 2.455783e-51 | -8.615850e-47 |
| Msa0106320 | Msa0626460 | 0.818417 | 1.982213e-52 | -8.615850e-47 |
| Msa0106320 | Msa0626490 | 0.813486 | 2.498432e-51 | -8.615850e-47 |
| Msa0106320 | Msa0628420 | 0.804280 | 2.329826e-49 | -8.615850e-47 |
| Msa0106320 | Msa0638480 | 0.807559 | 4.764812e-50 | -8.615850e-47 |
| Msa0106320 | Msa0652000 | 0.852742 | 3.781825e-61 | -8.615850e-47 |
| Msa0106320 | Msa0660370 | 0.808275 | 3.354515e-50 | -8.615850e-47 |
| Msa0106320 | Msa0664540 | 0.810464 | 1.137665e-50 | -8.615850e-47 |
| Msa0106320 | Msa0664600 | 0.815051 | 1.126747e-51 | -8.615850e-47 |
| Msa0106320 | Msa0669180 | 0.807823 | 4.186778e-50 | -8.615850e-47 |
| Msa0106320 | Msa0690310 | 0.801882 | 7.299171e-49 | -8.615850e-47 |
| Msa0106320 | Msa0692880 | 0.831487 | 1.623362e-55 | -8.615850e-47 |
| Msa0106320 | Msa0693330 | 0.817097 | 3.934457e-52 | -8.615850e-47 |
| Msa0106320 | Msa0698100 | 0.807337 | 5.309876e-50 | -8.615850e-47 |
| Msa0106320 | Msa0706760 | 0.826111 | 3.245770e-54 | -8.615850e-47 |
| Msa0106320 | Msa0706900 | 0.824797 | 6.643733e-54 | -8.615850e-47 |
| Msa0106320 | Msa0707710 | 0.810041 | 1.403712e-50 | -8.615850e-47 |
| Msa0106320 | Msa0744100 | 0.817191 | 3.747689e-52 | -8.615850e-47 |
| Msa0106320 | Msa0788120 | 0.801303 | 9.595635e-49 | -8.615850e-47 |
| Msa0106320 | Msa0790400 | 0.809071 | 2.267581e-50 | -8.615850e-47 |
| Msa0106320 | Msa0797920 | 0.804777 | 1.835846e-49 | -8.615850e-47 |
| Msa0106320 | Msa0799000 | 0.810864 | 9.326120e-51 | -8.615850e-47 |
| Msa0106320 | Msa0825270 | 0.812371 | 4.384508e-51 | -8.615850e-47 |
| Msa0106320 | Msa0835970 | 0.801114 | 1.048885e-48 | -8.615850e-47 |
| Msa0106320 | Msa0861510 | 0.805070 | 1.594031e-49 | -8.615850e-47 |
| Msa0106320 | Msa0861600 | 0.804565 | 2.032353e-49 | -8.615850e-47 |
| Msa0106320 | Msa0864420 | 0.823797 | 1.141490e-53 | -8.615850e-47 |
| Msa0106320 | Msa0880270 | 0.800123 | 1.670528e-48 | -8.615850e-47 |
| Msa0106320 | Msa0982650 | 0.803069 | 4.156790e-49 | -8.615850e-47 |
| Msa0106320 | Msa1028280 | 0.826986 | 2.007387e-54 | -8.615850e-47 |
| Msa0106320 | Msa1072940 | 0.815467 | 9.108511e-52 | -8.615850e-47 |
| Msa0106320 | Msa1076560 | 0.831495 | 1.616422e-55 | -8.615850e-47 |
| Msa0106320 | Msa1127590 | 0.833881 | 4.132499e-56 | -8.615850e-47 |
| Msa0106320 | Msa1130890 | 0.808448 | 3.081993e-50 | -8.615850e-47 |
| Msa0106320 | Msa1145240 | 0.822526 | 2.259674e-53 | -8.615850e-47 |
| Msa0106320 | Msa1145810 | 0.820577 | 6.374882e-53 | -8.615850e-47 |
| Msa0106320 | Msa1160920 | 0.819243 | 1.286520e-52 | -8.615850e-47 |
| Msa0106320 | Msa1162770 | 0.805249 | 1.462388e-49 | -8.615850e-47 |
| Msa0106320 | Msa1174530 | 0.823799 | 1.139940e-53 | -8.615850e-47 |
| Msa0106320 | Msa1206230 | 0.847438 | 1.156526e-59 | -8.615850e-47 |
| Msa0106320 | Msa1219000 | 0.800988 | 1.112826e-48 | -8.615850e-47 |
| Msa0106320 | Msa1234550 | 0.805943 | 1.045777e-49 | -8.615850e-47 |
| Msa0106320 | Msa1235250 | 0.820519 | 6.573145e-53 | -8.615850e-47 |
| Msa0106320 | Msa1253550 | 0.818155 | 2.271578e-52 | -8.615850e-47 |
| Msa0106320 | Msa1276660 | 0.802492 | 5.468261e-49 | -8.615850e-47 |
| Msa0106320 | Msa1277080 | 0.816930 | 4.288877e-52 | -8.615850e-47 |
| Msa0106320 | Msa1278740 | 0.817291 | 3.558283e-52 | -8.615850e-47 |
| Msa0106320 | Msa1292020 | 0.820010 | 8.597761e-53 | -8.615850e-47 |
| Msa0106320 | Msa1297970 | 0.851774 | 7.128099e-61 | -8.615850e-47 |
| Msa0106320 | Msa1317950 | 0.822556 | 2.223582e-53 | -8.615850e-47 |
| Msa0106320 | Msa1317960 | 0.829250 | 5.719078e-55 | -8.615850e-47 |
| Msa0106320 | Msa1319330 | 0.802236 | 6.173170e-49 | -8.615850e-47 |
| Msa0106320 | Msa1333560 | 0.827777 | 1.297315e-54 | -8.615850e-47 |
| Msa0106320 | Msa1335160 | 0.817046 | 4.039425e-52 | -8.615850e-47 |
| Msa0106320 | Msa1352350 | 0.806875 | 6.651761e-50 | -8.615850e-47 |
| Msa0106320 | Msa1369150 | 0.823161 | 1.607692e-53 | -8.615850e-47 |
| Msa0106320 | Msa1371520 | 0.847001 | 1.523809e-59 | -8.615850e-47 |
| Msa0106320 | Msa1371910 | 0.813136 | 2.981259e-51 | -8.615850e-47 |
| Msa0106320 | Msa1373820 | 0.838101 | 3.513022e-57 | -8.615850e-47 |
| Msa0106320 | Msa1375280 | 0.804249 | 2.365265e-49 | -8.615850e-47 |
| Msa0106320 | Msa1393820 | 0.804745 | 1.863852e-49 | -8.615850e-47 |
| Msa0106320 | Msa1399770 | 0.828549 | 8.452643e-55 | -8.615850e-47 |
| Msa0106320 | Msa1403570 | 0.807345 | 5.290326e-50 | -8.615850e-47 |
| Msa0106320 | Msa1411500 | 0.807695 | 4.458412e-50 | -8.615850e-47 |
| Msa0106320 | Msa1411950 | 0.811817 | 5.790970e-51 | -8.615850e-47 |
| Msa0106320 | Msa1418240 | 0.802080 | 6.647164e-49 | -8.615850e-47 |
| Msa0106320 | Msa1427110 | 0.818881 | 1.554894e-52 | -8.615850e-47 |
| Msa0106320 | Msa1432920 | 0.815512 | 8.898370e-52 | -8.615850e-47 |
| Msa0106320 | Msa1434740 | 0.809693 | 1.667727e-50 | -8.615850e-47 |
| Msa0106320 | Msa1440960 | 0.805083 | 1.584389e-49 | -8.615850e-47 |
| Msa0106320 | Msa1443300 | 0.814321 | 1.635339e-51 | -8.615850e-47 |
| Msa0106320 | Msa1443930 | 0.828869 | 7.073598e-55 | -8.615850e-47 |
| Msa0106320 | Msa1459460 | 0.841700 | 4.052900e-58 | -8.615850e-47 |
| Msa0106320 | Msa1465200 | 0.802927 | 4.447004e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106320 | MtrunA17_Chr1g0162021 | 97.416 | 658 | 17 | 0 | 1 | 658 | 1 | 658 | 0.0 | 1330 |
| Msa0106320 | MtrunA17_Chr1g0162051 | 68.650 | 437 | 112 | 7 | 238 | 658 | 1 | 428 | 0.0 | 584 |
| Msa0106320 | MtrunA17_Chr1g0162041 | 74.874 | 199 | 37 | 2 | 1 | 199 | 1 | 186 | 1.76e-100 | 305 |
| Msa0106320 | MtrunA17_Chr1g0196531 | 31.227 | 538 | 272 | 17 | 46 | 564 | 38 | 496 | 1.54e-67 | 230 |
| Msa0106320 | MtrunA17_Chr7g0259341 | 31.308 | 543 | 272 | 21 | 42 | 564 | 23 | 484 | 5.28e-63 | 217 |
| Msa0106320 | MtrunA17_Chr1g0150581 | 29.526 | 359 | 214 | 13 | 140 | 479 | 65 | 403 | 2.55e-33 | 134 |
| Msa0106320 | MtrunA17_Chr2g0277921 | 30.104 | 289 | 180 | 9 | 222 | 490 | 153 | 439 | 1.86e-31 | 128 |
| Msa0106320 | MtrunA17_Chr2g0277881 | 29.804 | 255 | 170 | 5 | 222 | 469 | 19 | 271 | 4.56e-29 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0106320 | AT1G14710.2 | 45.942 | 616 | 265 | 18 | 1 | 589 | 1 | 575 | 4.59e-162 | 478 |
| Msa0106320 | AT1G14710.1 | 45.942 | 616 | 265 | 18 | 1 | 589 | 1 | 575 | 4.59e-162 | 478 |
| Msa0106320 | AT4G02940.1 | 31.283 | 569 | 328 | 16 | 46 | 597 | 47 | 569 | 2.04e-64 | 223 |
| Msa0106320 | AT2G48080.1 | 32.155 | 283 | 173 | 6 | 213 | 489 | 117 | 386 | 3.52e-38 | 147 |
| Msa0106320 | AT2G48080.1 | 31.319 | 182 | 104 | 5 | 46 | 209 | 23 | 201 | 8.41e-17 | 84.0 |
| Msa0106320 | AT2G17970.9 | 34.034 | 238 | 144 | 5 | 252 | 477 | 123 | 359 | 2.97e-34 | 136 |
| Msa0106320 | AT2G17970.2 | 34.034 | 238 | 144 | 5 | 252 | 477 | 123 | 359 | 2.97e-34 | 136 |
| Msa0106320 | AT2G17970.3 | 34.034 | 238 | 144 | 5 | 252 | 477 | 123 | 359 | 2.97e-34 | 136 |
| Msa0106320 | AT2G17970.5 | 34.034 | 238 | 144 | 5 | 252 | 477 | 156 | 392 | 4.43e-34 | 136 |
| Msa0106320 | AT2G17970.7 | 34.034 | 238 | 144 | 5 | 252 | 477 | 156 | 392 | 4.43e-34 | 136 |
| Msa0106320 | AT2G17970.10 | 34.034 | 238 | 144 | 5 | 252 | 477 | 114 | 350 | 4.59e-34 | 135 |
| Msa0106320 | AT2G17970.1 | 34.034 | 238 | 144 | 5 | 252 | 477 | 197 | 433 | 1.12e-33 | 135 |
| Msa0106320 | AT1G48980.2 | 32.812 | 256 | 152 | 7 | 222 | 466 | 50 | 296 | 1.89e-32 | 128 |
| Msa0106320 | AT1G48980.1 | 32.812 | 256 | 152 | 7 | 222 | 466 | 54 | 300 | 1.90e-32 | 128 |
| Msa0106320 | AT2G17970.4 | 34.123 | 211 | 131 | 4 | 252 | 455 | 123 | 332 | 6.22e-32 | 127 |
| Msa0106320 | AT2G17970.8 | 34.123 | 211 | 131 | 4 | 252 | 455 | 197 | 406 | 2.64e-31 | 127 |
| Msa0106320 | AT4G36090.2 | 31.984 | 247 | 155 | 6 | 252 | 486 | 133 | 378 | 6.48e-31 | 126 |
| Msa0106320 | AT4G36090.3 | 31.579 | 247 | 156 | 5 | 252 | 486 | 201 | 446 | 1.71e-30 | 126 |
| Msa0106320 | AT1G48980.3 | 32.377 | 244 | 145 | 7 | 222 | 454 | 54 | 288 | 8.65e-30 | 120 |
| Msa0106320 | AT4G36090.5 | 32.857 | 210 | 133 | 4 | 252 | 454 | 201 | 409 | 6.40e-28 | 117 |
| Msa0106320 | AT2G17970.6 | 32.796 | 186 | 117 | 4 | 252 | 430 | 197 | 381 | 1.45e-22 | 100 |
| Msa0106320 | AT4G36090.4 | 32.979 | 188 | 105 | 6 | 252 | 432 | 201 | 374 | 3.99e-20 | 93.6 |
| Msa0106320 | AT4G36090.1 | 32.979 | 188 | 105 | 6 | 252 | 432 | 201 | 374 | 3.99e-20 | 93.6 |
Find 198 sgRNAs with CRISPR-Local
Find 440 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTCTTCCATGTCCTCTTA+TGG | 0.176074 | 1_3:-15559708 | None:intergenic |
| GTTCATTGGTCAATGATTTA+AGG | 0.182023 | 1_3:+15558659 | Msa0106320:CDS |
| ACCTCTACGATAAAGGAAAA+TGG | 0.206612 | 1_3:+15562069 | Msa0106320:CDS |
| GGGAAGGATGTATAACATTT+TGG | 0.220996 | 1_3:+15562375 | Msa0106320:three_prime_UTR |
| TTCAGCAGAGGAGGGTTAAT+TGG | 0.239558 | 1_3:+15556870 | Msa0106320:CDS |
| GTCAGCATTTAGGTGTTATT+GGG | 0.268959 | 1_3:+15556813 | Msa0106320:CDS |
| CATTTGTCTCAGAGCACTTT+GGG | 0.274989 | 1_3:+15560201 | Msa0106320:CDS |
| TGTCAGCATTTAGGTGTTAT+TGG | 0.294663 | 1_3:+15556812 | Msa0106320:CDS |
| GTGAGATCTACGAATGAAAA+AGG | 0.301352 | 1_3:-15556416 | None:intergenic |
| ACTGAATGTGACATGACTTT+TGG | 0.308787 | 1_3:+15560173 | Msa0106320:CDS |
| TCTCTTCCATGTCCTCTTAT+GGG | 0.320704 | 1_3:-15559707 | None:intergenic |
| TATTCTGCTGTTCAAGTAAC+CGG | 0.321185 | 1_3:+15561781 | Msa0106320:CDS |
| ATTTCCCTTGCATCACTAGA+AGG | 0.334442 | 1_3:-15561564 | None:intergenic |
| GCCGGAAAATGCTTAATTTC+CGG | 0.334696 | 1_3:-15556641 | None:intergenic |
| AGAGAGATGGGTTTATGAAT+TGG | 0.335350 | 1_3:+15556744 | Msa0106320:CDS |
| AACATTTGGCCGTCTTCATT+TGG | 0.344951 | 1_3:+15560125 | Msa0106320:CDS |
| GTCAATGATTTAAGGGTTGC+TGG | 0.346194 | 1_3:+15558667 | Msa0106320:CDS |
| TTCATTGGTCAATGATTTAA+GGG | 0.347438 | 1_3:+15558660 | Msa0106320:CDS |
| TGGTGGCAAAGTTGGATATA+AGG | 0.350502 | 1_3:+15557150 | Msa0106320:CDS |
| GATTGTTTGTGTCAGCATTT+AGG | 0.352627 | 1_3:+15556803 | Msa0106320:CDS |
| AACAATGGCTGCATGCTATT+AGG | 0.355623 | 1_3:-15561835 | None:intergenic |
| AGTTTCAAAACTTGGTTCAT+TGG | 0.358902 | 1_3:+15558645 | Msa0106320:CDS |
| ATCTCTCTCTAATCTCTCAT+TGG | 0.361935 | 1_3:-15562242 | None:intergenic |
| ATGCGTTGTTTGTGAATAGA+AGG | 0.371926 | 1_3:-15561613 | None:intergenic |
| GTTTGTGAAGCCGGTTGTTA+AGG | 0.375526 | 1_3:+15556979 | Msa0106320:CDS |
| AATTCCAACCTCTACGATAA+AGG | 0.375623 | 1_3:+15562062 | Msa0106320:CDS |
| AATGAAGACGGCCAAATGTT+TGG | 0.380699 | 1_3:-15560122 | None:intergenic |
| CCAATCCCGCCTGGCTCTAC+AGG | 0.389178 | 1_3:+15561904 | Msa0106320:CDS |
| ACCACTCAACGCCAAACATT+TGG | 0.391810 | 1_3:+15560111 | Msa0106320:CDS |
| CCTCCTCGAGTCGTTGTTCC+CGG | 0.394340 | 1_3:+15561955 | Msa0106320:CDS |
| CTTCAGGTTAATGTTGTTGA+AGG | 0.394691 | 1_3:+15558586 | Msa0106320:intron |
| GTTAAATCTGGTGGCAAAGT+TGG | 0.395532 | 1_3:+15557142 | Msa0106320:CDS |
| TTCCTAAACTCCTTAACAAC+CGG | 0.401772 | 1_3:-15556989 | None:intergenic |
| CCTGTAGAGCCAGGCGGGAT+TGG | 0.404095 | 1_3:-15561904 | None:intergenic |
| TGCAGCAGGTGGCGTGGAGG+CGG | 0.410514 | 1_3:+15556948 | Msa0106320:CDS |
| TACCTTAACTGAAGTGAACT+TGG | 0.411064 | 1_3:+15562032 | Msa0106320:CDS |
| AGCAATGTCAAGCTTTCTCT+TGG | 0.412536 | 1_3:+15560233 | Msa0106320:CDS |
| GCAGCAGAGGTTTGTGAAGC+CGG | 0.415066 | 1_3:+15556970 | Msa0106320:CDS |
| CACAGGTGTAGCAAATTGTA+TGG | 0.416248 | 1_3:-15561881 | None:intergenic |
| ACCCAAGTTCACTTCAGTTA+AGG | 0.419432 | 1_3:-15562034 | None:intergenic |
| AATTGTATGGGAGTTGCAAC+TGG | 0.420597 | 1_3:-15561868 | None:intergenic |
| GTAATGAGAAGAAAGGAGTT+TGG | 0.422020 | 1_3:-15556367 | None:intergenic |
| TTAAGGGTTGCTGGAAGAAA+AGG | 0.425939 | 1_3:+15558676 | Msa0106320:CDS |
| AGCCGGTTGTTAAGGAGTTT+AGG | 0.431475 | 1_3:+15556987 | Msa0106320:CDS |
| GAACAGGCGATAGAGGAAAA+AGG | 0.433017 | 1_3:+15562192 | Msa0106320:CDS |
| AGTACTGAAGTTTCAAAACT+TGG | 0.433213 | 1_3:+15558637 | Msa0106320:CDS |
| TCTAATCATAGCAATACTAA+TGG | 0.437415 | 1_3:+15562096 | Msa0106320:CDS |
| AAGAGTGAAGAAGTTAAATC+TGG | 0.439367 | 1_3:+15557130 | Msa0106320:CDS |
| CCTCTACGATAAAGGAAAAT+GGG | 0.441941 | 1_3:+15562070 | Msa0106320:CDS |
| GTTAGCAATGAGATGTTTGA+TGG | 0.442976 | 1_3:+15558435 | Msa0106320:CDS |
| ACATTGTCCACGTCAGCAAT+TGG | 0.447329 | 1_3:-15559749 | None:intergenic |
| TGCTGCTGTTGCTGTGGTGG+TGG | 0.450073 | 1_3:-15556695 | None:intergenic |
| ATATGATTCGGAGATCTGTT+TGG | 0.450319 | 1_3:-15561730 | None:intergenic |
| GTCAGGAAAAGCGTATAAAC+AGG | 0.452435 | 1_3:-15560152 | None:intergenic |
| TGAAGTTGAACAGGCGATAG+AGG | 0.457366 | 1_3:+15562185 | Msa0106320:CDS |
| TCACCAAAAGGTAAAATGAA+TGG | 0.458597 | 1_3:+15562120 | Msa0106320:CDS |
| ATGGGAGTTGCAACTGGCGC+TGG | 0.459514 | 1_3:-15561862 | None:intergenic |
| TTAAGGAGTTTAGGAAGGGT+AGG | 0.460250 | 1_3:+15556996 | Msa0106320:CDS |
| GTCAAGCTTTCTCTTGGACC+TGG | 0.461574 | 1_3:+15560239 | Msa0106320:CDS |
| AATACTAATGGTTCACCAAA+AGG | 0.461948 | 1_3:+15562108 | Msa0106320:CDS |
| CAGAGGTTTGAGGGTGGGAA+TGG | 0.465691 | 1_3:+15557025 | Msa0106320:CDS |
| ACAGAATGTGCATCAAATTC+TGG | 0.468027 | 1_3:+15557899 | Msa0106320:CDS |
| TTGGATTCGTAGCGAATTCG+CGG | 0.468773 | 1_3:+15556763 | Msa0106320:CDS |
| ACAGGAGTCTTCCTTCCGCC+TGG | 0.470551 | 1_3:+15561979 | Msa0106320:CDS |
| AGGTGCAACTGAAGTTGAAC+AGG | 0.470564 | 1_3:+15562176 | Msa0106320:CDS |
| ACATTTGTCTCAGAGCACTT+TGG | 0.470759 | 1_3:+15560200 | Msa0106320:CDS |
| TTAGGTGTTATTGGGGAGAG+TGG | 0.471463 | 1_3:+15556821 | Msa0106320:CDS |
| CGAGGAGGAGGATGCCTTGG+AGG | 0.472071 | 1_3:-15561940 | None:intergenic |
| AAATCGACGATGCAAGCATC+AGG | 0.473203 | 1_3:-15559960 | None:intergenic |
| TAGGCAATGGCAGAGGTTTG+AGG | 0.474866 | 1_3:+15557015 | Msa0106320:CDS |
| TGGCGTGGAGGCGGCAGCAG+AGG | 0.475670 | 1_3:+15556957 | Msa0106320:CDS |
| ACACCTGTGCCAATCCCGCC+TGG | 0.477942 | 1_3:+15561895 | Msa0106320:CDS |
| GGTGAGTATGATCATGTTGT+TGG | 0.481124 | 1_3:+15556842 | Msa0106320:CDS |
| GAAAATCATCGTCGTGGTGA+AGG | 0.489467 | 1_3:+15557073 | Msa0106320:CDS |
| CGGAAGGAAGACTCCTGTGC+CGG | 0.489719 | 1_3:-15561974 | None:intergenic |
| CAAGAATGCAATGGTAATGC+AGG | 0.494423 | 1_3:+15562156 | Msa0106320:CDS |
| CATCGTCGATTTCTATAATG+AGG | 0.495227 | 1_3:+15559971 | Msa0106320:CDS |
| GGACGATGACTAATATGATT+CGG | 0.496573 | 1_3:-15561742 | None:intergenic |
| GTTTGAGGGTGGGAATGGTA+AGG | 0.499098 | 1_3:+15557030 | Msa0106320:CDS |
| TGTTGCTGCTGTTGCTGTGG+TGG | 0.500371 | 1_3:-15556698 | None:intergenic |
| GGTGTTACTGCATTTCCCAT+TGG | 0.507593 | 1_3:-15556620 | None:intergenic |
| CGACATACGTGGTTAACAAA+AGG | 0.508191 | 1_3:+15559684 | Msa0106320:CDS |
| CGAGTCGTTGTTCCCGGCAC+AGG | 0.509569 | 1_3:+15561961 | Msa0106320:CDS |
| AAGTCATGTCACATTCAGTC+AGG | 0.512515 | 1_3:-15560169 | None:intergenic |
| TCCATCCTGTAGAGCCAGGC+GGG | 0.513497 | 1_3:-15561909 | None:intergenic |
| GGAAGGAAGACTCCTGTGCC+GGG | 0.513713 | 1_3:-15561973 | None:intergenic |
| GAGCCAGGCGGGATTGGCAC+AGG | 0.514193 | 1_3:-15561898 | None:intergenic |
| ACTCGAGGAGGAGGATGCCT+TGG | 0.514438 | 1_3:-15561943 | None:intergenic |
| ACAGTCCATCCTGTAGAGCC+AGG | 0.516590 | 1_3:-15561913 | None:intergenic |
| AATTTCCAGAGCTCTTCAAA+AGG | 0.517631 | 1_3:-15557856 | None:intergenic |
| TTTCCGGCGGTGGTTACCGC+CGG | 0.518436 | 1_3:+15556656 | Msa0106320:CDS |
| GGAAGAAAAGGACAATTTCA+AGG | 0.519573 | 1_3:+15558688 | Msa0106320:CDS |
| TGAGATGAGTTAGCAGAGCC+AGG | 0.521622 | 1_3:-15561997 | None:intergenic |
| TCAAGTAACCGGGGTGCTGC+CGG | 0.522831 | 1_3:+15561792 | Msa0106320:CDS |
| AAGAGCTCTGGAAATTCTCA+AGG | 0.523667 | 1_3:+15557863 | Msa0106320:CDS |
| GAGGGTGGGAATGGTAAGGA+AGG | 0.523988 | 1_3:+15557034 | Msa0106320:CDS |
| TTGAACAGCAGAATAATGCT+TGG | 0.524124 | 1_3:-15561773 | None:intergenic |
| TGCGTACGCGTTGCAGCAGG+TGG | 0.527248 | 1_3:+15556937 | Msa0106320:CDS |
| AACGTGAGTGGTTCCACCAC+AGG | 0.529106 | 1_3:+15558402 | Msa0106320:CDS |
| TGGAAGAGAGATGATTCAGT+TGG | 0.529263 | 1_3:+15559721 | Msa0106320:CDS |
| TGAGATGTTTGATGGGAAGA+TGG | 0.533285 | 1_3:+15558443 | Msa0106320:CDS |
| ACTGAAGTGAACTTGGGTGT+TGG | 0.533352 | 1_3:+15562039 | Msa0106320:CDS |
| AGGCAATGGCAGAGGTTTGA+GGG | 0.539109 | 1_3:+15557016 | Msa0106320:CDS |
| GTTAACAAAAGGCCCATAAG+AGG | 0.539978 | 1_3:+15559695 | Msa0106320:CDS |
| TTTGGCCGTCTTCATTTGGA+AGG | 0.540261 | 1_3:+15560129 | Msa0106320:CDS |
| TCAAGCTTTCTCTTGGACCT+GGG | 0.542395 | 1_3:+15560240 | Msa0106320:CDS |
| AATGTGACAGCGTCGTTCAA+AGG | 0.545588 | 1_3:+15559767 | Msa0106320:CDS |
| GGTTGCGTACGCGTTGCAGC+AGG | 0.545735 | 1_3:+15556934 | Msa0106320:CDS |
| TGAACAGCAGAATAATGCTT+GGG | 0.545822 | 1_3:-15561772 | None:intergenic |
| ATTCTGCTGTTCAAGTAACC+GGG | 0.548410 | 1_3:+15561782 | Msa0106320:CDS |
| GGTTTGTTGATGAGAGAGAT+GGG | 0.550236 | 1_3:+15556732 | Msa0106320:CDS |
| CTCAATGATATCTTGAAACA+AGG | 0.552597 | 1_3:-15559904 | None:intergenic |
| TCAAGATATCATTGAGCGCA+TGG | 0.553274 | 1_3:+15559911 | Msa0106320:CDS |
| TGATGTTGCTGCTGTTGCTG+TGG | 0.554152 | 1_3:-15556701 | None:intergenic |
| TTGTTGAGTAATGAGAAGAA+AGG | 0.554371 | 1_3:-15556374 | None:intergenic |
| TTCGGAGATCTGTTTGGTGC+GGG | 0.555113 | 1_3:-15561724 | None:intergenic |
| GGAAGAGAGATGATTCAGTT+GGG | 0.559430 | 1_3:+15559722 | Msa0106320:CDS |
| TGGTTTGTTGATGAGAGAGA+TGG | 0.561608 | 1_3:+15556731 | Msa0106320:CDS |
| TGCTATTAGGAGCAACATGT+AGG | 0.561743 | 1_3:-15561822 | None:intergenic |
| GCCAAATGTTTGGCGTTGAG+TGG | 0.562418 | 1_3:-15560112 | None:intergenic |
| AATGAGAGATTAGAGAGAGA+TGG | 0.562454 | 1_3:+15562244 | Msa0106320:exon |
| TTGGTGCAATTCAGCAGAGG+AGG | 0.562955 | 1_3:+15556861 | Msa0106320:CDS |
| AAAATCATCGTCGTGGTGAA+GGG | 0.566281 | 1_3:+15557074 | Msa0106320:CDS |
| GGAAGGGTAGGCAATGGCAG+AGG | 0.566349 | 1_3:+15557008 | Msa0106320:CDS |
| TCCCGCCTGGCTCTACAGGA+TGG | 0.566829 | 1_3:+15561908 | Msa0106320:CDS |
| GGTTGTTAAGGAGTTTAGGA+AGG | 0.567040 | 1_3:+15556991 | Msa0106320:CDS |
| GGAACAACGACTCGAGGAGG+AGG | 0.567084 | 1_3:-15561952 | None:intergenic |
| AGAGATGGAAAGCTTATCAA+AGG | 0.567468 | 1_3:+15562259 | Msa0106320:three_prime_UTR |
| TTTCCCTTGCATCACTAGAA+GGG | 0.569855 | 1_3:-15561563 | None:intergenic |
| CTCCGTCAGCAACTTCACAT+TGG | 0.570942 | 1_3:+15561698 | Msa0106320:CDS |
| GAATAATGCTTGGGAGCTAA+CGG | 0.572073 | 1_3:-15561763 | None:intergenic |
| GACACTGCTGAGGAGAAGAA+AGG | 0.574319 | 1_3:+15557187 | Msa0106320:CDS |
| TCACCGGCGGTAACCACCGC+CGG | 0.577073 | 1_3:-15556659 | None:intergenic |
| GATGGACTGTGGCTCCTCCA+AGG | 0.578865 | 1_3:+15561926 | Msa0106320:CDS |
| TCAGCATTTAGGTGTTATTG+GGG | 0.581125 | 1_3:+15556814 | Msa0106320:CDS |
| GGAATGGAACTAACAAAGGA+AGG | 0.582272 | 1_3:-15562411 | None:intergenic |
| AGTTAGCAGAGCCAGGCGGA+AGG | 0.584884 | 1_3:-15561990 | None:intergenic |
| GCAAGACCTTGAGCATCACT+TGG | 0.587423 | 1_3:-15561676 | None:intergenic |
| ACTGGCGCTGGGACAAACAA+TGG | 0.587978 | 1_3:-15561850 | None:intergenic |
| CAAAATGTAAAGAGCGGCAA+CGG | 0.588999 | 1_3:+15562318 | Msa0106320:three_prime_UTR |
| ACGCGTTGCAGCAGGTGGCG+TGG | 0.589277 | 1_3:+15556942 | Msa0106320:CDS |
| GATATAACATTATACTGCAA+AGG | 0.592804 | 1_3:+15562343 | Msa0106320:three_prime_UTR |
| ATGATATCTTGAAACAAGGA+AGG | 0.593091 | 1_3:-15559900 | None:intergenic |
| AACTCATCTCAGCACTCGCA+AGG | 0.594014 | 1_3:+15562009 | Msa0106320:CDS |
| GCTATTAGGAGCAACATGTA+GGG | 0.594317 | 1_3:-15561821 | None:intergenic |
| GCAACATGTAGGGATGGAGC+CGG | 0.594320 | 1_3:-15561811 | None:intergenic |
| AGTTTAGGAAGGGTAGGCAA+TGG | 0.596438 | 1_3:+15557002 | Msa0106320:CDS |
| AGGTCCCTTCTAGTGATGCA+AGG | 0.600287 | 1_3:+15561559 | Msa0106320:intron |
| AAAAGGCCCATAAGAGGACA+TGG | 0.601532 | 1_3:+15559701 | Msa0106320:CDS |
| TGGGAGTTGCAACTGGCGCT+GGG | 0.602477 | 1_3:-15561861 | None:intergenic |
| GGTCCCTTCTAGTGATGCAA+GGG | 0.605574 | 1_3:+15561560 | Msa0106320:intron |
| ATACTGCAAAGGAGAGAACA+AGG | 0.606432 | 1_3:+15562354 | Msa0106320:three_prime_UTR |
| AGAAGGAATGGAACTAACAA+AGG | 0.607159 | 1_3:-15562415 | None:intergenic |
| TGGTCTGTACTGCATCTCAC+CGG | 0.608831 | 1_3:-15556675 | None:intergenic |
| GGATGGAGCCGGCAGCACCC+CGG | 0.612297 | 1_3:-15561800 | None:intergenic |
| AATGTAAAGAGCGGCAACGG+TGG | 0.613143 | 1_3:+15562321 | Msa0106320:three_prime_UTR |
| TGGTGCAATTCAGCAGAGGA+GGG | 0.615294 | 1_3:+15556862 | Msa0106320:CDS |
| TTAGGAGCAACATGTAGGGA+TGG | 0.616506 | 1_3:-15561817 | None:intergenic |
| AGTGAAGAAGTTAAATCTGG+TGG | 0.616931 | 1_3:+15557133 | Msa0106320:CDS |
| ACCTTAACTGAAGTGAACTT+GGG | 0.617201 | 1_3:+15562033 | Msa0106320:CDS |
| ACAGGTGTAGCAAATTGTAT+GGG | 0.617438 | 1_3:-15561880 | None:intergenic |
| AATGGCAGAGGTTTGAGGGT+GGG | 0.618784 | 1_3:+15557020 | Msa0106320:CDS |
| ATTCGGAGATCTGTTTGGTG+CGG | 0.619364 | 1_3:-15561725 | None:intergenic |
| GGGTGTTCCAATTGCTGACG+TGG | 0.620031 | 1_3:+15559742 | Msa0106320:CDS |
| ATTGAAAGACAAGAATGCAA+TGG | 0.620535 | 1_3:+15562147 | Msa0106320:CDS |
| AGGGTGGGAATGGTAAGGAA+GGG | 0.630717 | 1_3:+15557035 | Msa0106320:CDS |
| CAATGGCAGAGGTTTGAGGG+TGG | 0.636238 | 1_3:+15557019 | Msa0106320:CDS |
| TTAGCAATGAGATGTTTGAT+GGG | 0.636295 | 1_3:+15558436 | Msa0106320:CDS |
| GAATGTGCATCAAATTCTGG+AGG | 0.638203 | 1_3:+15557902 | Msa0106320:CDS |
| ACAGGCCTTCCAAATGAAGA+CGG | 0.639412 | 1_3:-15560134 | None:intergenic |
| GTTGTTAAGGAGTTTAGGAA+GGG | 0.642734 | 1_3:+15556992 | Msa0106320:CDS |
| CGTTGCAGCAGGTGGCGTGG+AGG | 0.643887 | 1_3:+15556945 | Msa0106320:CDS |
| AATGGGAAATGCAGTAACAC+CGG | 0.644726 | 1_3:+15556622 | Msa0106320:CDS |
| ATTTGTCTCAGAGCACTTTG+GGG | 0.647839 | 1_3:+15560202 | Msa0106320:CDS |
| AATCAACAACAGAACGTGAG+TGG | 0.649122 | 1_3:+15558390 | Msa0106320:CDS |
| TTGTTGGTGCAATTCAGCAG+AGG | 0.652480 | 1_3:+15556858 | Msa0106320:CDS |
| CCGGGAACAACGACTCGAGG+AGG | 0.654433 | 1_3:-15561955 | None:intergenic |
| GTGCCGGGAACAACGACTCG+AGG | 0.655043 | 1_3:-15561958 | None:intergenic |
| AGCAGCAACATCAACAACAA+TGG | 0.658542 | 1_3:+15556711 | Msa0106320:CDS |
| TTCTGCTGTTCAAGTAACCG+GGG | 0.662775 | 1_3:+15561783 | Msa0106320:CDS |
| CTTAACAGACATGACTTGTG+AGG | 0.663477 | 1_3:-15559937 | None:intergenic |
| TAAGAATTTAGACACTGCTG+AGG | 0.667493 | 1_3:+15557177 | Msa0106320:CDS |
| GCAAAGGAGAGAACAAGGGA+AGG | 0.672030 | 1_3:+15562359 | Msa0106320:three_prime_UTR |
| TTGAAGCAAAATGTAAAGAG+CGG | 0.673556 | 1_3:+15562312 | Msa0106320:three_prime_UTR |
| TGCGCAAAAGAATTTAACGA+GGG | 0.675641 | 1_3:-15562510 | None:intergenic |
| AAAGGAAAGTGTGAAGATGG+TGG | 0.677411 | 1_3:-15556398 | None:intergenic |
| TCTGTACTGCATCTCACCGG+CGG | 0.680815 | 1_3:-15556672 | None:intergenic |
| TGGCTCTACAGGATGGACTG+TGG | 0.684505 | 1_3:+15561915 | Msa0106320:CDS |
| AACAGGGAGTCCGACATACG+TGG | 0.684978 | 1_3:+15559673 | Msa0106320:intron |
| TACTGCAAAGGAGAGAACAA+GGG | 0.689014 | 1_3:+15562355 | Msa0106320:three_prime_UTR |
| TTAATGTTGTTGAAGGACTG+AGG | 0.691860 | 1_3:+15558593 | Msa0106320:CDS |
| AGTGTAGAAAATCATCGTCG+TGG | 0.692889 | 1_3:+15557067 | Msa0106320:CDS |
| GACCAATGTGAAGTTGCTGA+CGG | 0.693407 | 1_3:-15561700 | None:intergenic |
| GAATCTGACAGATAAGAATG+CGG | 0.695849 | 1_3:+15559869 | Msa0106320:intron |
| TCTCTGCCAAGTGATGCTCA+AGG | 0.700665 | 1_3:+15561670 | Msa0106320:CDS |
| GATGAGTTAGCAGAGCCAGG+CGG | 0.703314 | 1_3:-15561994 | None:intergenic |
| ATGCGCAAAAGAATTTAACG+AGG | 0.711419 | 1_3:-15562511 | None:intergenic |
| GTCCATCCTGTAGAGCCAGG+CGG | 0.716481 | 1_3:-15561910 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAAATTAAAAATTA+GGG | - | chr1_3:15556521-15556540 | None:intergenic | 0.0% |
| !! | TAATAAATAAATTAAAAATT+AGG | - | chr1_3:15556522-15556541 | None:intergenic | 0.0% |
| !! | AAAAAAAAAATAAAAAAATT+GGG | - | chr1_3:15559128-15559147 | None:intergenic | 0.0% |
| !!! | CTTTTATATTTTATTTTATG+GGG | + | chr1_3:15558549-15558568 | Msa0106320:intron | 10.0% |
| !!! | ATTTTTTTTTTCAATATACA+AGG | + | chr1_3:15559137-15559156 | Msa0106320:intron | 10.0% |
| !! | GACTAAATTTATTATAAAAA+AGG | - | chr1_3:15559281-15559300 | None:intergenic | 10.0% |
| !!! | GTATGTTTTTTTTTTTTTTT+TGG | + | chr1_3:15560003-15560022 | Msa0106320:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGGAA+GGG | + | chr1_3:15560008-15560027 | Msa0106320:intron | 10.0% |
| !!! | AAATATACAATTTAAAATTG+TGG | + | chr1_3:15560522-15560541 | Msa0106320:intron | 10.0% |
| !! | GATGATTAATTAATATAATA+AGG | - | chr1_3:15560607-15560626 | None:intergenic | 10.0% |
| !! | ATTTGATGGAAAAAAAATTA+GGG | - | chr1_3:15556465-15556484 | None:intergenic | 15.0% |
| !! | AATTTGATGGAAAAAAAATT+AGG | - | chr1_3:15556466-15556485 | None:intergenic | 15.0% |
| !!! | AATTTATTTTTCATATGATC+TGG | + | chr1_3:15557560-15557579 | Msa0106320:intron | 15.0% |
| !! | TAAGTGTATTTATGAAATTT+GGG | + | chr1_3:15557992-15558011 | Msa0106320:intron | 15.0% |
| !! | GATAGATATTTAAAAAGATT+AGG | - | chr1_3:15558189-15558208 | None:intergenic | 15.0% |
| !! | TAAAAGATATAAGAAAAAGA+AGG | - | chr1_3:15558535-15558554 | None:intergenic | 15.0% |
| !! | ATTCAAAAAAAGTTATCAAA+AGG | + | chr1_3:15558970-15558989 | Msa0106320:intron | 15.0% |
| !!! | CATATATAACTCATTTTTTA+TGG | - | chr1_3:15559163-15559182 | None:intergenic | 15.0% |
| !!! | TTTTATATATTTTCCCATAT+AGG | + | chr1_3:15559325-15559344 | Msa0106320:intron | 15.0% |
| !!! | TTTTTTTGTGCTTTTTTTTT+AGG | + | chr1_3:15559444-15559463 | Msa0106320:intron | 15.0% |
| !!! | TTTTTTGTGCTTTTTTTTTA+GGG | + | chr1_3:15559445-15559464 | Msa0106320:intron | 15.0% |
| !!! | GTTTTTTTTTTTTTTTTGGA+AGG | + | chr1_3:15560007-15560026 | Msa0106320:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTTGGAAG+GGG | + | chr1_3:15560009-15560028 | Msa0106320:intron | 15.0% |
| !! | AAAAAAAATTGACAACAATT+TGG | - | chr1_3:15560758-15560777 | None:intergenic | 15.0% |
| !! | TTACAAATAATCATAGTAAT+GGG | - | chr1_3:15560809-15560828 | None:intergenic | 15.0% |
| !! | ATTACAAATAATCATAGTAA+TGG | - | chr1_3:15560810-15560829 | None:intergenic | 15.0% |
| !! | TACTATGATTATTTGTAATT+AGG | + | chr1_3:15560811-15560830 | Msa0106320:intron | 15.0% |
| !!! | GTTTTTATTTACAATTTTTG+TGG | + | chr1_3:15561140-15561159 | Msa0106320:intron | 15.0% |
| !! | ACAGAGTAAATAATAATAAT+AGG | - | chr1_3:15561530-15561549 | None:intergenic | 15.0% |
| !!! | AATGGTTTTAAATTGCAATT+CGG | + | chr1_3:15557603-15557622 | Msa0106320:intron | 20.0% |
| !! | AGTAGATGAAAAATTCAATA+TGG | - | chr1_3:15557794-15557813 | None:intergenic | 20.0% |
| !!! | ATATTGAATTTTTCATCTAC+TGG | + | chr1_3:15557793-15557812 | Msa0106320:intron | 20.0% |
| !! | ATAAAAAATCATCAATCTGA+TGG | + | chr1_3:15557833-15557852 | Msa0106320:CDS | 20.0% |
| !! | CTAAGTGTATTTATGAAATT+TGG | + | chr1_3:15557991-15558010 | Msa0106320:intron | 20.0% |
| !! | AAAAATGACAAAAAGAAATG+AGG | - | chr1_3:15558497-15558516 | None:intergenic | 20.0% |
| !!! | TTGTTTTTCATTCTTTGTTT+TGG | + | chr1_3:15558760-15558779 | Msa0106320:intron | 20.0% |
| !! | CAAATAAAAATTAATACCAC+TGG | - | chr1_3:15559223-15559242 | None:intergenic | 20.0% |
| !! | ATGATGGTCTAAAAAAAATT+GGG | - | chr1_3:15559424-15559443 | None:intergenic | 20.0% |
| !! | AATGATGGTCTAAAAAAAAT+TGG | - | chr1_3:15559425-15559444 | None:intergenic | 20.0% |
| !!! | AAAAAGCACAAAAAAAATGA+TGG | - | chr1_3:15559440-15559459 | None:intergenic | 20.0% |
| !! | GCCAATATCTTAAATTATAA+CGG | + | chr1_3:15559467-15559486 | Msa0106320:intron | 20.0% |
| !! | CCAATATCTTAAATTATAAC+GGG | + | chr1_3:15559468-15559487 | Msa0106320:intron | 20.0% |
| !! | CAATATCTTAAATTATAACG+GGG | + | chr1_3:15559469-15559488 | Msa0106320:intron | 20.0% |
| !! | AGTACAATAAATATTTGACT+TGG | - | chr1_3:15559524-15559543 | None:intergenic | 20.0% |
| !! | AACTTTAAGTATTATGTCTT+TGG | + | chr1_3:15559568-15559587 | Msa0106320:intron | 20.0% |
| !!! | TTTTTTTTTTTTTTGGAAGG+GGG | + | chr1_3:15560010-15560029 | Msa0106320:intron | 20.0% |
| !! | TCCATATTACAATTATCTAT+AGG | + | chr1_3:15560085-15560104 | Msa0106320:intron | 20.0% |
| !! | CCATATTACAATTATCTATA+GGG | + | chr1_3:15560086-15560105 | Msa0106320:intron | 20.0% |
| !!! | ATTTGTTAACCTTATTTGTT+TGG | + | chr1_3:15560267-15560286 | Msa0106320:intron | 20.0% |
| !!! | TATTTTGTTGTTGTTACTAT+TGG | + | chr1_3:15560302-15560321 | Msa0106320:intron | 20.0% |
| !!! | AAATTTGACTACAATTTTGA+TGG | + | chr1_3:15560345-15560364 | Msa0106320:intron | 20.0% |
| !! | TGGTTAACAAAGTTTAAATA+TGG | - | chr1_3:15560734-15560753 | None:intergenic | 20.0% |
| !! | TCATAGAAGACAATTAATTA+TGG | + | chr1_3:15560835-15560854 | Msa0106320:intron | 20.0% |
| !! | TACTTAGAAAGTAATACATT+TGG | - | chr1_3:15560970-15560989 | None:intergenic | 20.0% |
| !! | AAATGTATTACTTTCTAAGT+AGG | + | chr1_3:15560969-15560988 | Msa0106320:intron | 20.0% |
| !! | GAATTATTGAATCTGAATAA+GGG | - | chr1_3:15561489-15561508 | None:intergenic | 20.0% |
| !! | TGAATTATTGAATCTGAATA+AGG | - | chr1_3:15561490-15561509 | None:intergenic | 20.0% |
| !! | TAATAATAGGCCATAATAAT+CGG | - | chr1_3:15561517-15561536 | None:intergenic | 20.0% |
| !! | ATATTAAGACAACAAAAAGA+AGG | - | chr1_3:15562435-15562454 | None:intergenic | 20.0% |
| !!! | TTGTTGTTATTGAGTTTTCA+TGG | + | chr1_3:15556592-15556611 | Msa0106320:exon | 25.0% |
| !! | AAACAAATATCTTTTGTCCA+TGG | + | chr1_3:15557490-15557509 | Msa0106320:intron | 25.0% |
| !!! | TTTTTGTGTTGCAGTTTTAA+TGG | + | chr1_3:15557585-15557604 | Msa0106320:intron | 25.0% |
| !!! | GAAATGTTACTATTTTTAGC+AGG | - | chr1_3:15557733-15557752 | None:intergenic | 25.0% |
| ! | TTATTCAAATCATAGTCAAC+AGG | - | chr1_3:15557935-15557954 | None:intergenic | 25.0% |
| ! | AAAAAACAGCAAGTAATGTT+CGG | + | chr1_3:15558097-15558116 | Msa0106320:intron | 25.0% |
| !! | AAGATTAGGATGTCAATTTT+GGG | - | chr1_3:15558175-15558194 | None:intergenic | 25.0% |
| !! | AAAGATTAGGATGTCAATTT+TGG | - | chr1_3:15558176-15558195 | None:intergenic | 25.0% |
| ! | TTCATTGGTCAATGATTTAA+GGG | + | chr1_3:15558660-15558679 | Msa0106320:CDS | 25.0% |
| ! | AATGAAAAACAAATTAGCGA+TGG | - | chr1_3:15558752-15558771 | None:intergenic | 25.0% |
| ! | ACCAACATTAAAAATATGTG+CGG | - | chr1_3:15558857-15558876 | None:intergenic | 25.0% |
| ! | CAAAAAAAGTTATCAAAAGG+AGG | + | chr1_3:15558973-15558992 | Msa0106320:intron | 25.0% |
| !! | GCTAACTATCATCTTTAAAA+TGG | + | chr1_3:15559016-15559035 | Msa0106320:intron | 25.0% |
| ! | TGATGGTCTAAAAAAAATTG+GGG | - | chr1_3:15559423-15559442 | None:intergenic | 25.0% |
| !! | CCCGTTATAATTTAAGATAT+TGG | - | chr1_3:15559471-15559490 | None:intergenic | 25.0% |
| !!! | TTGCAACATTTTGAAACTTA+GGG | - | chr1_3:15559613-15559632 | None:intergenic | 25.0% |
| !!! | ATTGCAACATTTTGAAACTT+AGG | - | chr1_3:15559614-15559633 | None:intergenic | 25.0% |
| ! | TGCTAATATCTTTAATGAAC+AGG | + | chr1_3:15559656-15559675 | Msa0106320:intron | 25.0% |
| ! | GCTAATATCTTTAATGAACA+GGG | + | chr1_3:15559657-15559676 | Msa0106320:intron | 25.0% |
| ! | TGGTCATTATTATAGAAGTA+GGG | - | chr1_3:15559832-15559851 | None:intergenic | 25.0% |
| ! | TTGGTCATTATTATAGAAGT+AGG | - | chr1_3:15559833-15559852 | None:intergenic | 25.0% |
| ! | TTCATTTAGTGAAACTTCAT+TGG | - | chr1_3:15559852-15559871 | None:intergenic | 25.0% |
| ! | TCAAATTTGTAAACGTAACA+CGG | + | chr1_3:15560060-15560079 | Msa0106320:intron | 25.0% |
| ! | CCCTATAGATAATTGTAATA+TGG | - | chr1_3:15560089-15560108 | None:intergenic | 25.0% |
| ! | TTGTATATTTGAACACGATT+TGG | - | chr1_3:15560512-15560531 | None:intergenic | 25.0% |
| !!! | GTTGATGATGTTTAAAATCA+TGG | + | chr1_3:15560544-15560563 | Msa0106320:intron | 25.0% |
| ! | TGGTTAACGAAGTTTAAATA+TGG | - | chr1_3:15560648-15560667 | None:intergenic | 25.0% |
| ! | AAAAAAAAACGACAACAACT+TGG | - | chr1_3:15560672-15560691 | None:intergenic | 25.0% |
| ! | AAAATTGACAACAATTTGGT+TGG | - | chr1_3:15560754-15560773 | None:intergenic | 25.0% |
| ! | AAACAAAAACCTAGAATTCA+TGG | - | chr1_3:15561093-15561112 | None:intergenic | 25.0% |
| ! | ATGTTACTGTGCTTATAATT+TGG | + | chr1_3:15561202-15561221 | Msa0106320:intron | 25.0% |
| !! | CTTTTAGTCAATTGTATTCA+AGG | + | chr1_3:15561246-15561265 | Msa0106320:intron | 25.0% |
| ! | TGAGTTAAATACATTGCTTA+TGG | + | chr1_3:15561414-15561433 | Msa0106320:intron | 25.0% |
| ! | AATTCAATACCCGATTATTA+TGG | + | chr1_3:15561504-15561523 | Msa0106320:intron | 25.0% |
| ! | AATAATAGGCCATAATAATC+GGG | - | chr1_3:15561516-15561535 | None:intergenic | 25.0% |
| ! | TCTAATCATAGCAATACTAA+TGG | + | chr1_3:15562096-15562115 | Msa0106320:CDS | 25.0% |
| !! | TTTCCATTCATTTTACCTTT+TGG | - | chr1_3:15562126-15562145 | None:intergenic | 25.0% |
| ! | GATATAACATTATACTGCAA+AGG | + | chr1_3:15562343-15562362 | Msa0106320:three_prime_UTR | 25.0% |
| TTGTTGAGTAATGAGAAGAA+AGG | - | chr1_3:15556377-15556396 | None:intergenic | 30.0% | |
| CGAAAAAGTGGAAAATTTGA+TGG | - | chr1_3:15556479-15556498 | None:intergenic | 30.0% | |
| ! | AAGGGAATTTTGTGGTTAAA+GGG | + | chr1_3:15557092-15557111 | Msa0106320:CDS | 30.0% |
| AAGAGTGAAGAAGTTAAATC+TGG | + | chr1_3:15557130-15557149 | Msa0106320:CDS | 30.0% | |
| ACTGTTAAACCACAATGTTA+GGG | + | chr1_3:15557286-15557305 | Msa0106320:intron | 30.0% | |
| ! | TACCGAGTATTTTCAAATAG+CGG | + | chr1_3:15557358-15557377 | Msa0106320:intron | 30.0% |
| !!! | TGATTTTAATTGCAGTCAAG+TGG | - | chr1_3:15557642-15557661 | None:intergenic | 30.0% |
| TAAATACACTTAGCAAAGTC+TGG | - | chr1_3:15557984-15558003 | None:intergenic | 30.0% | |
| CAAACTACATGTATCCTATA+AGG | - | chr1_3:15558283-15558302 | None:intergenic | 30.0% | |
| TTAGCAATGAGATGTTTGAT+GGG | + | chr1_3:15558436-15558455 | Msa0106320:CDS | 30.0% | |
| ! | AGTACTGAAGTTTCAAAACT+TGG | + | chr1_3:15558637-15558656 | Msa0106320:CDS | 30.0% |
| AGTTTCAAAACTTGGTTCAT+TGG | + | chr1_3:15558645-15558664 | Msa0106320:CDS | 30.0% | |
| GTTCATTGGTCAATGATTTA+AGG | + | chr1_3:15558659-15558678 | Msa0106320:CDS | 30.0% | |
| TTTGTCTGATTGTTATGCAA+TGG | + | chr1_3:15558799-15558818 | Msa0106320:intron | 30.0% | |
| !! | TCCGCACATATTTTTAATGT+TGG | + | chr1_3:15558853-15558872 | Msa0106320:intron | 30.0% |
| GTAGTTGAGTAGTTATCAAA+AGG | + | chr1_3:15558932-15558951 | Msa0106320:intron | 30.0% | |
| ! | TTATCAAAAGGAGGTCATTT+TGG | + | chr1_3:15558944-15558963 | Msa0106320:intron | 30.0% |
| AAGATGATAGTTAGCATCAA+AGG | - | chr1_3:15559011-15559030 | None:intergenic | 30.0% | |
| ! | AAAAACAAAGGGTTTGGAAT+GGG | - | chr1_3:15559397-15559416 | None:intergenic | 30.0% |
| AATTGGGGTACAAAAACAAA+GGG | - | chr1_3:15559408-15559427 | None:intergenic | 30.0% | |
| AAATTGGGGTACAAAAACAA+AGG | - | chr1_3:15559409-15559428 | None:intergenic | 30.0% | |
| GGTCTCTAAATTGTTTAAGA+CGG | + | chr1_3:15559490-15559509 | Msa0106320:intron | 30.0% | |
| !! | AAATATTTGACTTGGCATCA+GGG | - | chr1_3:15559516-15559535 | None:intergenic | 30.0% |
| !! | TAAATATTTGACTTGGCATC+AGG | - | chr1_3:15559517-15559536 | None:intergenic | 30.0% |
| !!! | TGCAACATTTTGAAACTTAG+GGG | - | chr1_3:15559612-15559631 | None:intergenic | 30.0% |
| TATTATAGAAGTAGGGAATG+TGG | - | chr1_3:15559825-15559844 | None:intergenic | 30.0% | |
| ATGATATCTTGAAACAAGGA+AGG | - | chr1_3:15559903-15559922 | None:intergenic | 30.0% | |
| CTCAATGATATCTTGAAACA+AGG | - | chr1_3:15559907-15559926 | None:intergenic | 30.0% | |
| AAGGTTAACAAATATTACCC+AGG | - | chr1_3:15560260-15560279 | None:intergenic | 30.0% | |
| ACTAGCATACCAAACAAATA+AGG | - | chr1_3:15560279-15560298 | None:intergenic | 30.0% | |
| TGGTTAATGCTATTCAAATG+TGG | + | chr1_3:15560365-15560384 | Msa0106320:intron | 30.0% | |
| TGTAATTAACCATGACTTTC+TGG | + | chr1_3:15560462-15560481 | Msa0106320:intron | 30.0% | |
| ATTTACCCTACCTAATACTA+GGG | - | chr1_3:15560904-15560923 | None:intergenic | 30.0% | |
| AATTTACCCTACCTAATACT+AGG | - | chr1_3:15560905-15560924 | None:intergenic | 30.0% | |
| ! | GTAGGGTAAATTGTTTTCTT+TGG | + | chr1_3:15560913-15560932 | Msa0106320:intron | 30.0% |
| ACCAAGTACATTTAAAGATG+AGG | - | chr1_3:15560942-15560961 | None:intergenic | 30.0% | |
| TTTCATCATCCATGAATTCT+AGG | + | chr1_3:15561081-15561100 | Msa0106320:intron | 30.0% | |
| ! | ATTTGGCTTAGTAACTTGAA+AGG | + | chr1_3:15561219-15561238 | Msa0106320:intron | 30.0% |
| ATATCATGCATCATGATTCA+CGG | - | chr1_3:15561283-15561302 | None:intergenic | 30.0% | |
| TGAATCATGATGCATGATAT+GGG | + | chr1_3:15561283-15561302 | Msa0106320:intron | 30.0% | |
| ACATTGCTTATGGTAATTAG+AGG | + | chr1_3:15561424-15561443 | Msa0106320:intron | 30.0% | |
| AATACTAATGGTTCACCAAA+AGG | + | chr1_3:15562108-15562127 | Msa0106320:CDS | 30.0% | |
| TCACCAAAAGGTAAAATGAA+TGG | + | chr1_3:15562120-15562139 | Msa0106320:CDS | 30.0% | |
| ATTGAAAGACAAGAATGCAA+TGG | + | chr1_3:15562147-15562166 | Msa0106320:CDS | 30.0% | |
| TTGAAGCAAAATGTAAAGAG+CGG | + | chr1_3:15562312-15562331 | Msa0106320:three_prime_UTR | 30.0% | |
| AAGACAACAAAAAGAAGGAA+TGG | - | chr1_3:15562430-15562449 | None:intergenic | 30.0% | |
| ! | GAAAAAGGAAAGTGTGAAGA+TGG | - | chr1_3:15556404-15556423 | None:intergenic | 35.0% |
| GTGAGATCTACGAATGAAAA+AGG | - | chr1_3:15556419-15556438 | None:intergenic | 35.0% | |
| GTGAAATTGAAGCGAAAAAG+TGG | - | chr1_3:15556491-15556510 | None:intergenic | 35.0% | |
| ! | ACCGGAAATTAAGCATTTTC+CGG | + | chr1_3:15556640-15556659 | Msa0106320:CDS | 35.0% |
| ! | AGAGAGATGGGTTTATGAAT+TGG | + | chr1_3:15556744-15556763 | Msa0106320:CDS | 35.0% |
| GATTGTTTGTGTCAGCATTT+AGG | + | chr1_3:15556803-15556822 | Msa0106320:CDS | 35.0% | |
| ! | TGTCAGCATTTAGGTGTTAT+TGG | + | chr1_3:15556812-15556831 | Msa0106320:CDS | 35.0% |
| !! | GTCAGCATTTAGGTGTTATT+GGG | + | chr1_3:15556813-15556832 | Msa0106320:CDS | 35.0% |
| !! | TCAGCATTTAGGTGTTATTG+GGG | + | chr1_3:15556814-15556833 | Msa0106320:CDS | 35.0% |
| ! | GCTTATGCAGCAGTATTTTT+CGG | + | chr1_3:15556904-15556923 | Msa0106320:CDS | 35.0% |
| TTCCTAAACTCCTTAACAAC+CGG | - | chr1_3:15556992-15557011 | None:intergenic | 35.0% | |
| GTTGTTAAGGAGTTTAGGAA+GGG | + | chr1_3:15556992-15557011 | Msa0106320:CDS | 35.0% | |
| ! | GAAGGGAATTTTGTGGTTAA+AGG | + | chr1_3:15557091-15557110 | Msa0106320:CDS | 35.0% |
| AGTGAAGAAGTTAAATCTGG+TGG | + | chr1_3:15557133-15557152 | Msa0106320:CDS | 35.0% | |
| TAAGAATTTAGACACTGCTG+AGG | + | chr1_3:15557177-15557196 | Msa0106320:CDS | 35.0% | |
| AGGAGAAGAAAGGTAAATGA+TGG | + | chr1_3:15557197-15557216 | Msa0106320:intron | 35.0% | |
| GGAGAAGAAAGGTAAATGAT+GGG | + | chr1_3:15557198-15557217 | Msa0106320:intron | 35.0% | |
| TTGTTCGATTATTTGAGTCG+TGG | + | chr1_3:15557223-15557242 | Msa0106320:intron | 35.0% | |
| !!! | TGAGTCGTGGTTTTAAATTG+CGG | + | chr1_3:15557236-15557255 | Msa0106320:intron | 35.0% |
| GCGATTGTAGATATAGTCAT+AGG | + | chr1_3:15557261-15557280 | Msa0106320:intron | 35.0% | |
| GACTGTTAAACCACAATGTT+AGG | + | chr1_3:15557285-15557304 | Msa0106320:intron | 35.0% | |
| TTTCACTAAATCGCATATCG+CGG | - | chr1_3:15557423-15557442 | None:intergenic | 35.0% | |
| !! | GTGAAAGTGTTGTCAAATAG+CGG | + | chr1_3:15557437-15557456 | Msa0106320:intron | 35.0% |
| ! | CTTTTGTCCATGGTTAATCT+TGG | + | chr1_3:15557500-15557519 | Msa0106320:intron | 35.0% |
| TAGAGATCCAAGATTAACCA+TGG | - | chr1_3:15557510-15557529 | None:intergenic | 35.0% | |
| !!! | ACTATTTTTAGCAGGCCAAA+AGG | - | chr1_3:15557725-15557744 | None:intergenic | 35.0% |
| AATTTCCAGAGCTCTTCAAA+AGG | - | chr1_3:15557859-15557878 | None:intergenic | 35.0% | |
| ACAGAATGTGCATCAAATTC+TGG | + | chr1_3:15557899-15557918 | Msa0106320:CDS | 35.0% | |
| TGACAAACACAGAAAGATGA+GGG | - | chr1_3:15558137-15558156 | None:intergenic | 35.0% | |
| TTCATACACCATGTGCTTAT+AGG | + | chr1_3:15558247-15558266 | Msa0106320:intron | 35.0% | |
| !! | GTACAAGAGTATCAGTATGA+TGG | - | chr1_3:15558334-15558353 | None:intergenic | 35.0% |
| ! | AACAAAAGTTTTTCCTGTGG+TGG | - | chr1_3:15558418-15558437 | None:intergenic | 35.0% |
| ! | GCTAACAAAAGTTTTTCCTG+TGG | - | chr1_3:15558421-15558440 | None:intergenic | 35.0% |
| GTTAGCAATGAGATGTTTGA+TGG | + | chr1_3:15558435-15558454 | Msa0106320:CDS | 35.0% | |
| !!! | GGCATCTGTTTTTAATCTTC+AGG | + | chr1_3:15558570-15558589 | Msa0106320:intron | 35.0% |
| ! | CTTCAGGTTAATGTTGTTGA+AGG | + | chr1_3:15558586-15558605 | Msa0106320:intron | 35.0% |
| TTAATGTTGTTGAAGGACTG+AGG | + | chr1_3:15558593-15558612 | Msa0106320:CDS | 35.0% | |
| GGAAGAAAAGGACAATTTCA+AGG | + | chr1_3:15558688-15558707 | Msa0106320:CDS | 35.0% | |
| GTTGAGTAGTTATCAAAAGG+AGG | + | chr1_3:15558935-15558954 | Msa0106320:intron | 35.0% | |
| AGTTATCAAAAGGAGGTCTA+TGG | + | chr1_3:15558980-15558999 | Msa0106320:intron | 35.0% | |
| CAAAAACAAAGGGTTTGGAA+TGG | - | chr1_3:15559398-15559417 | None:intergenic | 35.0% | |
| !!! | GCAACATTTTGAAACTTAGG+GGG | - | chr1_3:15559611-15559630 | None:intergenic | 35.0% |
| ! | CTTTTGTTAACCACGTATGT+CGG | - | chr1_3:15559686-15559705 | None:intergenic | 35.0% |
| GAATCTGACAGATAAGAATG+CGG | + | chr1_3:15559869-15559888 | Msa0106320:intron | 35.0% | |
| !! | CATCGTCGATTTCTATAATG+AGG | + | chr1_3:15559971-15559990 | Msa0106320:CDS | 35.0% |
| ! | ACTGAATGTGACATGACTTT+TGG | + | chr1_3:15560173-15560192 | Msa0106320:CDS | 35.0% |
| ! | CTGAATGTGACATGACTTTT+GGG | + | chr1_3:15560174-15560193 | Msa0106320:CDS | 35.0% |
| GGTCAATTGTATTCAGTTGA+TGG | + | chr1_3:15560565-15560584 | Msa0106320:intron | 35.0% | |
| ! | ATGGTGTCAATTACGTTTAG+TGG | - | chr1_3:15560629-15560648 | None:intergenic | 35.0% |
| AAAAACGACAACAACTTGGT+TGG | - | chr1_3:15560668-15560687 | None:intergenic | 35.0% | |
| ! | AATATGGTGTTAGTTACGCT+TGG | - | chr1_3:15560718-15560737 | None:intergenic | 35.0% |
| TTAGTTGAGTCCCTAGTATT+AGG | + | chr1_3:15560891-15560910 | Msa0106320:intron | 35.0% | |
| GCCTCATCTTTAAATGTACT+TGG | + | chr1_3:15560938-15560957 | Msa0106320:intron | 35.0% | |
| TTCATGGATGATGAAACACA+AGG | - | chr1_3:15561077-15561096 | None:intergenic | 35.0% | |
| GTGAATCATGATGCATGATA+TGG | + | chr1_3:15561282-15561301 | Msa0106320:intron | 35.0% | |
| GAATCATGATGCATGATATG+GGG | + | chr1_3:15561284-15561303 | Msa0106320:intron | 35.0% | |
| GTAACGATCGAAAAACTATG+CGG | - | chr1_3:15561330-15561349 | None:intergenic | 35.0% | |
| GTTTCATACCATTATGTTCG+TGG | + | chr1_3:15561380-15561399 | Msa0106320:intron | 35.0% | |
| ATTAACCTCCACGAACATAA+TGG | - | chr1_3:15561391-15561410 | None:intergenic | 35.0% | |
| ATTATGTTCGTGGAGGTTAA+TGG | + | chr1_3:15561390-15561409 | Msa0106320:intron | 35.0% | |
| ATTTACTCTGTTGCAACTGT+AGG | + | chr1_3:15561539-15561558 | Msa0106320:intron | 35.0% | |
| ATGCGTTGTTTGTGAATAGA+AGG | - | chr1_3:15561616-15561635 | None:intergenic | 35.0% | |
| ! | ATATGATTCGGAGATCTGTT+TGG | - | chr1_3:15561733-15561752 | None:intergenic | 35.0% |
| GGACGATGACTAATATGATT+CGG | - | chr1_3:15561745-15561764 | None:intergenic | 35.0% | |
| TGAACAGCAGAATAATGCTT+GGG | - | chr1_3:15561775-15561794 | None:intergenic | 35.0% | |
| TTGAACAGCAGAATAATGCT+TGG | - | chr1_3:15561776-15561795 | None:intergenic | 35.0% | |
| TATTCTGCTGTTCAAGTAAC+CGG | + | chr1_3:15561781-15561800 | Msa0106320:CDS | 35.0% | |
| ACAGGTGTAGCAAATTGTAT+GGG | - | chr1_3:15561883-15561902 | None:intergenic | 35.0% | |
| TACCTTAACTGAAGTGAACT+TGG | + | chr1_3:15562032-15562051 | Msa0106320:CDS | 35.0% | |
| ACCTTAACTGAAGTGAACTT+GGG | + | chr1_3:15562033-15562052 | Msa0106320:CDS | 35.0% | |
| AATTCCAACCTCTACGATAA+AGG | + | chr1_3:15562062-15562081 | Msa0106320:CDS | 35.0% | |
| ! | TTTTCCTTTATCGTAGAGGT+TGG | - | chr1_3:15562069-15562088 | None:intergenic | 35.0% |
| ACCTCTACGATAAAGGAAAA+TGG | + | chr1_3:15562069-15562088 | Msa0106320:CDS | 35.0% | |
| CCTCTACGATAAAGGAAAAT+GGG | + | chr1_3:15562070-15562089 | Msa0106320:CDS | 35.0% | |
| ATCTCTCTCTAATCTCTCAT+TGG | - | chr1_3:15562245-15562264 | None:intergenic | 35.0% | |
| AATGAGAGATTAGAGAGAGA+TGG | + | chr1_3:15562244-15562263 | Msa0106320:exon | 35.0% | |
| AGAGATGGAAAGCTTATCAA+AGG | + | chr1_3:15562259-15562278 | Msa0106320:three_prime_UTR | 35.0% | |
| ! | GGGAAGGATGTATAACATTT+TGG | + | chr1_3:15562375-15562394 | Msa0106320:three_prime_UTR | 35.0% |
| AGAAGGAATGGAACTAACAA+AGG | - | chr1_3:15562418-15562437 | None:intergenic | 35.0% | |
| ! | AAAGGAAAGTGTGAAGATGG+TGG | - | chr1_3:15556401-15556420 | None:intergenic | 40.0% |
| ! | AGTTTTCATGGCAATGCCAA+TGG | + | chr1_3:15556604-15556623 | Msa0106320:exon | 40.0% |
| ! | GTTTTCATGGCAATGCCAAT+GGG | + | chr1_3:15556605-15556624 | Msa0106320:exon | 40.0% |
| AATGGGAAATGCAGTAACAC+CGG | + | chr1_3:15556622-15556641 | Msa0106320:CDS | 40.0% | |
| GCCGGAAAATGCTTAATTTC+CGG | - | chr1_3:15556644-15556663 | None:intergenic | 40.0% | |
| ! | GGAAATTAAGCATTTTCCGG+CGG | + | chr1_3:15556643-15556662 | Msa0106320:CDS | 40.0% |
| AGCAGCAACATCAACAACAA+TGG | + | chr1_3:15556711-15556730 | Msa0106320:CDS | 40.0% | |
| !! | TGGTTTGTTGATGAGAGAGA+TGG | + | chr1_3:15556731-15556750 | Msa0106320:CDS | 40.0% |
| !! | GGTTTGTTGATGAGAGAGAT+GGG | + | chr1_3:15556732-15556751 | Msa0106320:CDS | 40.0% |
| GGTGAGTATGATCATGTTGT+TGG | + | chr1_3:15556842-15556861 | Msa0106320:CDS | 40.0% | |
| !! | GCAGTATTTTTCGGTTAACG+AGG | + | chr1_3:15556913-15556932 | Msa0106320:CDS | 40.0% |
| GGTTGTTAAGGAGTTTAGGA+AGG | + | chr1_3:15556991-15557010 | Msa0106320:CDS | 40.0% | |
| TTAAGGAGTTTAGGAAGGGT+AGG | + | chr1_3:15556996-15557015 | Msa0106320:CDS | 40.0% | |
| AGTGTAGAAAATCATCGTCG+TGG | + | chr1_3:15557067-15557086 | Msa0106320:CDS | 40.0% | |
| AAAATCATCGTCGTGGTGAA+GGG | + | chr1_3:15557074-15557093 | Msa0106320:CDS | 40.0% | |
| GTTAAATCTGGTGGCAAAGT+TGG | + | chr1_3:15557142-15557161 | Msa0106320:CDS | 40.0% | |
| TGGTGGCAAAGTTGGATATA+AGG | + | chr1_3:15557150-15557169 | Msa0106320:CDS | 40.0% | |
| CGCCGCTATTTGAAAATACT+CGG | - | chr1_3:15557363-15557382 | None:intergenic | 40.0% | |
| AATCGCATATCGCGGAATAA+CGG | - | chr1_3:15557415-15557434 | None:intergenic | 40.0% | |
| TGTTGTCAAATAGCGGCTAT+AGG | + | chr1_3:15557444-15557463 | Msa0106320:intron | 40.0% | |
| !! | TTTTTAGCAGGCCAAAAGGT+CGG | - | chr1_3:15557721-15557740 | None:intergenic | 40.0% |
| !! | AAGAGCTCTGGAAATTCTCA+AGG | + | chr1_3:15557863-15557882 | Msa0106320:CDS | 40.0% |
| GAATGTGCATCAAATTCTGG+AGG | + | chr1_3:15557902-15557921 | Msa0106320:CDS | 40.0% | |
| AGCAAGTAATGTTCGGACTT+CGG | + | chr1_3:15558104-15558123 | Msa0106320:intron | 40.0% | |
| GTGACAAACACAGAAAGATG+AGG | - | chr1_3:15558138-15558157 | None:intergenic | 40.0% | |
| CATCTTTCTGTGTTTGTCAC+AGG | + | chr1_3:15558138-15558157 | Msa0106320:intron | 40.0% | |
| GTATGAAAGCTAGCAAGCAA+GGG | - | chr1_3:15558234-15558253 | None:intergenic | 40.0% | |
| TGTATGAAAGCTAGCAAGCA+AGG | - | chr1_3:15558235-15558254 | None:intergenic | 40.0% | |
| ACTCTCTTCCTATAAGCACA+TGG | - | chr1_3:15558258-15558277 | None:intergenic | 40.0% | |
| TAGGAAGAGAGTCACCTTAT+AGG | + | chr1_3:15558266-15558285 | Msa0106320:intron | 40.0% | |
| !! | ATGTAGTTTGCTGTGAAGAC+TGG | + | chr1_3:15558293-15558312 | Msa0106320:intron | 40.0% |
| AATCAACAACAGAACGTGAG+TGG | + | chr1_3:15558390-15558409 | Msa0106320:CDS | 40.0% | |
| TGAGATGTTTGATGGGAAGA+TGG | + | chr1_3:15558443-15558462 | Msa0106320:CDS | 40.0% | |
| ATGTTTGATGGGAAGATGGT+AGG | + | chr1_3:15558447-15558466 | Msa0106320:intron | 40.0% | |
| GTCAATGATTTAAGGGTTGC+TGG | + | chr1_3:15558667-15558686 | Msa0106320:CDS | 40.0% | |
| TTAAGGGTTGCTGGAAGAAA+AGG | + | chr1_3:15558676-15558695 | Msa0106320:CDS | 40.0% | |
| TATGCAATGGTCAATGTGTG+TGG | + | chr1_3:15558812-15558831 | Msa0106320:intron | 40.0% | |
| ACATTTGTGTATGCCAAGCA+GGG | + | chr1_3:15559046-15559065 | Msa0106320:intron | 40.0% | |
| ATTGGGCCCCAAAAAAATTG+AGG | - | chr1_3:15559111-15559130 | None:intergenic | 40.0% | |
| ! | CAGTGTCGAAGTGAAATCAT+AGG | + | chr1_3:15559185-15559204 | Msa0106320:intron | 40.0% |
| AAGTGAAATCATAGGATGCG+TGG | + | chr1_3:15559193-15559212 | Msa0106320:intron | 40.0% | |
| !! | TTATAAAAAAGGTGCCTGCC+AGG | - | chr1_3:15559270-15559289 | None:intergenic | 40.0% |
| !! | TTTTTAGCACAAACGACGAC+AGG | - | chr1_3:15559351-15559370 | None:intergenic | 40.0% |
| GGGTACAAAAACAAAGGGTT+TGG | - | chr1_3:15559403-15559422 | None:intergenic | 40.0% | |
| CGACATACGTGGTTAACAAA+AGG | + | chr1_3:15559684-15559703 | Msa0106320:CDS | 40.0% | |
| GTTAACAAAAGGCCCATAAG+AGG | + | chr1_3:15559695-15559714 | Msa0106320:CDS | 40.0% | |
| TCTCTTCCATGTCCTCTTAT+GGG | - | chr1_3:15559710-15559729 | None:intergenic | 40.0% | |
| TGGAAGAGAGATGATTCAGT+TGG | + | chr1_3:15559721-15559740 | Msa0106320:CDS | 40.0% | |
| GGAAGAGAGATGATTCAGTT+GGG | + | chr1_3:15559722-15559741 | Msa0106320:CDS | 40.0% | |
| TCAAGATATCATTGAGCGCA+TGG | + | chr1_3:15559911-15559930 | Msa0106320:CDS | 40.0% | |
| ! | CTTAACAGACATGACTTGTG+AGG | - | chr1_3:15559940-15559959 | None:intergenic | 40.0% |
| AATGAAGACGGCCAAATGTT+TGG | - | chr1_3:15560125-15560144 | None:intergenic | 40.0% | |
| AACATTTGGCCGTCTTCATT+TGG | + | chr1_3:15560125-15560144 | Msa0106320:CDS | 40.0% | |
| ! | GTCAGGAAAAGCGTATAAAC+AGG | - | chr1_3:15560155-15560174 | None:intergenic | 40.0% |
| AAGTCATGTCACATTCAGTC+AGG | - | chr1_3:15560172-15560191 | None:intergenic | 40.0% | |
| ! | ACATTTGTCTCAGAGCACTT+TGG | + | chr1_3:15560200-15560219 | Msa0106320:CDS | 40.0% |
| ! | CATTTGTCTCAGAGCACTTT+GGG | + | chr1_3:15560201-15560220 | Msa0106320:CDS | 40.0% |
| ! | ATTTGTCTCAGAGCACTTTG+GGG | + | chr1_3:15560202-15560221 | Msa0106320:CDS | 40.0% |
| AGCAATGTCAAGCTTTCTCT+TGG | + | chr1_3:15560233-15560252 | Msa0106320:CDS | 40.0% | |
| TTGAGTCCCTAGTATTAGGT+AGG | + | chr1_3:15560895-15560914 | Msa0106320:intron | 40.0% | |
| TGAGTCCCTAGTATTAGGTA+GGG | + | chr1_3:15560896-15560915 | Msa0106320:intron | 40.0% | |
| TGAAACACAAGGTCTCTTCA+TGG | - | chr1_3:15561066-15561085 | None:intergenic | 40.0% | |
| TTCGATCGTTACTCGATACT+AGG | + | chr1_3:15561338-15561357 | Msa0106320:intron | 40.0% | |
| TCATACCATTATGTTCGTGG+AGG | + | chr1_3:15561383-15561402 | Msa0106320:intron | 40.0% | |
| TTTCCCTTGCATCACTAGAA+GGG | - | chr1_3:15561566-15561585 | None:intergenic | 40.0% | |
| ATTTCCCTTGCATCACTAGA+AGG | - | chr1_3:15561567-15561586 | None:intergenic | 40.0% | |
| !!! | TCACTTGGCAGAGACTTTTT+TGG | - | chr1_3:15561664-15561683 | None:intergenic | 40.0% |
| GAATAATGCTTGGGAGCTAA+CGG | - | chr1_3:15561766-15561785 | None:intergenic | 40.0% | |
| ATTCTGCTGTTCAAGTAACC+GGG | + | chr1_3:15561782-15561801 | Msa0106320:CDS | 40.0% | |
| GCTATTAGGAGCAACATGTA+GGG | - | chr1_3:15561824-15561843 | None:intergenic | 40.0% | |
| TGCTATTAGGAGCAACATGT+AGG | - | chr1_3:15561825-15561844 | None:intergenic | 40.0% | |
| AACAATGGCTGCATGCTATT+AGG | - | chr1_3:15561838-15561857 | None:intergenic | 40.0% | |
| AATTGTATGGGAGTTGCAAC+TGG | - | chr1_3:15561871-15561890 | None:intergenic | 40.0% | |
| CACAGGTGTAGCAAATTGTA+TGG | - | chr1_3:15561884-15561903 | None:intergenic | 40.0% | |
| ACCCAAGTTCACTTCAGTTA+AGG | - | chr1_3:15562037-15562056 | None:intergenic | 40.0% | |
| ! | CCCATTTTCCTTTATCGTAG+AGG | - | chr1_3:15562073-15562092 | None:intergenic | 40.0% |
| ! | CAAGAATGCAATGGTAATGC+AGG | + | chr1_3:15562156-15562175 | Msa0106320:CDS | 40.0% |
| CAAAATGTAAAGAGCGGCAA+CGG | + | chr1_3:15562318-15562337 | Msa0106320:three_prime_UTR | 40.0% | |
| ATACTGCAAAGGAGAGAACA+AGG | + | chr1_3:15562354-15562373 | Msa0106320:three_prime_UTR | 40.0% | |
| TACTGCAAAGGAGAGAACAA+GGG | + | chr1_3:15562355-15562374 | Msa0106320:three_prime_UTR | 40.0% | |
| GGAATGGAACTAACAAAGGA+AGG | - | chr1_3:15562414-15562433 | None:intergenic | 40.0% | |
| !! | GGTGTTACTGCATTTCCCAT+TGG | - | chr1_3:15556623-15556642 | None:intergenic | 45.0% |
| ! | AATTAAGCATTTTCCGGCGG+TGG | + | chr1_3:15556646-15556665 | Msa0106320:CDS | 45.0% |
| TTGGATTCGTAGCGAATTCG+CGG | + | chr1_3:15556763-15556782 | Msa0106320:CDS | 45.0% | |
| !! | TTAGGTGTTATTGGGGAGAG+TGG | + | chr1_3:15556821-15556840 | Msa0106320:CDS | 45.0% |
| TTGTTGGTGCAATTCAGCAG+AGG | + | chr1_3:15556858-15556877 | Msa0106320:CDS | 45.0% | |
| TTCAGCAGAGGAGGGTTAAT+TGG | + | chr1_3:15556870-15556889 | Msa0106320:CDS | 45.0% | |
| GTTTGTGAAGCCGGTTGTTA+AGG | + | chr1_3:15556979-15556998 | Msa0106320:CDS | 45.0% | |
| AGCCGGTTGTTAAGGAGTTT+AGG | + | chr1_3:15556987-15557006 | Msa0106320:CDS | 45.0% | |
| AGTTTAGGAAGGGTAGGCAA+TGG | + | chr1_3:15557002-15557021 | Msa0106320:CDS | 45.0% | |
| GAAAATCATCGTCGTGGTGA+AGG | + | chr1_3:15557073-15557092 | Msa0106320:CDS | 45.0% | |
| ! | TCGTGGTGAAGGGAATTTTG+TGG | + | chr1_3:15557084-15557103 | Msa0106320:CDS | 45.0% |
| ACTGTGTGACCCTAACATTG+TGG | - | chr1_3:15557298-15557317 | None:intergenic | 45.0% | |
| GGCTATAGGCTGTGAAATTG+CGG | + | chr1_3:15557458-15557477 | Msa0106320:intron | 45.0% | |
| TGCAATTCGGAGACCATTGT+AGG | + | chr1_3:15557616-15557635 | Msa0106320:intron | 45.0% | |
| ! | ATACACGACTTCCGACCTTT+TGG | + | chr1_3:15557707-15557726 | Msa0106320:intron | 45.0% |
| GTGTGTGGCAAACACTTGAT+AGG | + | chr1_3:15558827-15558846 | Msa0106320:intron | 45.0% | |
| GACATTTGTGTATGCCAAGC+AGG | + | chr1_3:15559045-15559064 | Msa0106320:intron | 45.0% | |
| !!! | ACACCGGGCCTCAATTTTTT+TGG | + | chr1_3:15559100-15559119 | Msa0106320:intron | 45.0% |
| !!! | CACCGGGCCTCAATTTTTTT+GGG | + | chr1_3:15559101-15559120 | Msa0106320:intron | 45.0% |
| !!! | ACCGGGCCTCAATTTTTTTG+GGG | + | chr1_3:15559102-15559121 | Msa0106320:intron | 45.0% |
| TGAAATCATAGGATGCGTGG+TGG | + | chr1_3:15559196-15559215 | Msa0106320:intron | 45.0% | |
| CTTGACATGAGTTCAAGTCC+TGG | + | chr1_3:15559249-15559268 | Msa0106320:intron | 45.0% | |
| AAACGACGACAGGCCTATAT+GGG | - | chr1_3:15559341-15559360 | None:intergenic | 45.0% | |
| AAAAGGCCCATAAGAGGACA+TGG | + | chr1_3:15559701-15559720 | Msa0106320:CDS | 45.0% | |
| CTCTCTTCCATGTCCTCTTA+TGG | - | chr1_3:15559711-15559730 | None:intergenic | 45.0% | |
| ACATTGTCCACGTCAGCAAT+TGG | - | chr1_3:15559752-15559771 | None:intergenic | 45.0% | |
| AATGTGACAGCGTCGTTCAA+AGG | + | chr1_3:15559767-15559786 | Msa0106320:CDS | 45.0% | |
| AAATCGACGATGCAAGCATC+AGG | - | chr1_3:15559963-15559982 | None:intergenic | 45.0% | |
| GGGTGAGTACATGGGAAATT+TGG | + | chr1_3:15560030-15560049 | Msa0106320:intron | 45.0% | |
| ACCACTCAACGCCAAACATT+TGG | + | chr1_3:15560111-15560130 | Msa0106320:CDS | 45.0% | |
| TTTGGCCGTCTTCATTTGGA+AGG | + | chr1_3:15560129-15560148 | Msa0106320:CDS | 45.0% | |
| ACAGGCCTTCCAAATGAAGA+CGG | - | chr1_3:15560137-15560156 | None:intergenic | 45.0% | |
| TCAAGCTTTCTCTTGGACCT+GGG | + | chr1_3:15560240-15560259 | Msa0106320:CDS | 45.0% | |
| CGTTGAACACCAGAAAGTCA+TGG | - | chr1_3:15560474-15560493 | None:intergenic | 45.0% | |
| ! | ATGGTGTTAGTTACGCTTGG+TGG | - | chr1_3:15560715-15560734 | None:intergenic | 45.0% |
| GACCAATGTGAAGTTGCTGA+CGG | - | chr1_3:15561703-15561722 | None:intergenic | 45.0% | |
| ! | ATTCGGAGATCTGTTTGGTG+CGG | - | chr1_3:15561728-15561747 | None:intergenic | 45.0% |
| TTCTGCTGTTCAAGTAACCG+GGG | + | chr1_3:15561783-15561802 | Msa0106320:CDS | 45.0% | |
| TTAGGAGCAACATGTAGGGA+TGG | - | chr1_3:15561820-15561839 | None:intergenic | 45.0% | |
| ACTGAAGTGAACTTGGGTGT+TGG | + | chr1_3:15562039-15562058 | Msa0106320:CDS | 45.0% | |
| AGGTGCAACTGAAGTTGAAC+AGG | + | chr1_3:15562176-15562195 | Msa0106320:CDS | 45.0% | |
| TGAAGTTGAACAGGCGATAG+AGG | + | chr1_3:15562185-15562204 | Msa0106320:CDS | 45.0% | |
| GAACAGGCGATAGAGGAAAA+AGG | + | chr1_3:15562192-15562211 | Msa0106320:CDS | 45.0% | |
| !!! | ATCTTTTATATTTTATTTTA+TGG | + | chr1_3:15558547-15558566 | Msa0106320:intron | 5.0% |
| !!! | TCTTTTATATTTTATTTTAT+GGG | + | chr1_3:15558548-15558567 | Msa0106320:intron | 5.0% |
| !! | GAAAAAAAAAATAAAAAAAT+TGG | - | chr1_3:15559129-15559148 | None:intergenic | 5.0% |
| TGGTCTGTACTGCATCTCAC+CGG | - | chr1_3:15556678-15556697 | None:intergenic | 50.0% | |
| TGATGTTGCTGCTGTTGCTG+TGG | - | chr1_3:15556704-15556723 | None:intergenic | 50.0% | |
| TTGGTGCAATTCAGCAGAGG+AGG | + | chr1_3:15556861-15556880 | Msa0106320:CDS | 50.0% | |
| TGGTGCAATTCAGCAGAGGA+GGG | + | chr1_3:15556862-15556881 | Msa0106320:CDS | 50.0% | |
| TAGGCAATGGCAGAGGTTTG+AGG | + | chr1_3:15557015-15557034 | Msa0106320:CDS | 50.0% | |
| AGGCAATGGCAGAGGTTTGA+GGG | + | chr1_3:15557016-15557035 | Msa0106320:CDS | 50.0% | |
| AATGGCAGAGGTTTGAGGGT+GGG | + | chr1_3:15557020-15557039 | Msa0106320:CDS | 50.0% | |
| GTTTGAGGGTGGGAATGGTA+AGG | + | chr1_3:15557030-15557049 | Msa0106320:CDS | 50.0% | |
| AGGGTGGGAATGGTAAGGAA+GGG | + | chr1_3:15557035-15557054 | Msa0106320:CDS | 50.0% | |
| GACACTGCTGAGGAGAAGAA+AGG | + | chr1_3:15557187-15557206 | Msa0106320:CDS | 50.0% | |
| TGCAGTCAAGTGGCCTACAA+TGG | - | chr1_3:15557632-15557651 | None:intergenic | 50.0% | |
| !! | GATGGCCTTTTGAAGAGCTC+TGG | + | chr1_3:15557851-15557870 | Msa0106320:CDS | 50.0% |
| GCCCCAAAAAAATTGAGGCC+CGG | - | chr1_3:15559106-15559125 | None:intergenic | 50.0% | |
| ACATGAGTTCAAGTCCTGGC+AGG | + | chr1_3:15559253-15559272 | Msa0106320:intron | 50.0% | |
| CAAACGACGACAGGCCTATA+TGG | - | chr1_3:15559342-15559361 | None:intergenic | 50.0% | |
| TTTGGAAGGGGGTGAGTACA+TGG | + | chr1_3:15560021-15560040 | Msa0106320:intron | 50.0% | |
| TTGGAAGGGGGTGAGTACAT+GGG | + | chr1_3:15560022-15560041 | Msa0106320:intron | 50.0% | |
| ! | GCCAAATGTTTGGCGTTGAG+TGG | - | chr1_3:15560115-15560134 | None:intergenic | 50.0% |
| GTCAAGCTTTCTCTTGGACC+TGG | + | chr1_3:15560239-15560258 | Msa0106320:CDS | 50.0% | |
| CAAGGTCTCTTCATGGTGCA+TGG | - | chr1_3:15561059-15561078 | None:intergenic | 50.0% | |
| AGGTCCCTTCTAGTGATGCA+AGG | + | chr1_3:15561559-15561578 | Msa0106320:intron | 50.0% | |
| GGTCCCTTCTAGTGATGCAA+GGG | + | chr1_3:15561560-15561579 | Msa0106320:intron | 50.0% | |
| TCTCTGCCAAGTGATGCTCA+AGG | + | chr1_3:15561670-15561689 | Msa0106320:CDS | 50.0% | |
| GCAAGACCTTGAGCATCACT+TGG | - | chr1_3:15561679-15561698 | None:intergenic | 50.0% | |
| CTCCGTCAGCAACTTCACAT+TGG | + | chr1_3:15561698-15561717 | Msa0106320:CDS | 50.0% | |
| !! | TTCGGAGATCTGTTTGGTGC+GGG | - | chr1_3:15561727-15561746 | None:intergenic | 50.0% |
| TGAGATGAGTTAGCAGAGCC+AGG | - | chr1_3:15562000-15562019 | None:intergenic | 50.0% | |
| AACTCATCTCAGCACTCGCA+AGG | + | chr1_3:15562009-15562028 | Msa0106320:CDS | 50.0% | |
| AATGTAAAGAGCGGCAACGG+TGG | + | chr1_3:15562321-15562340 | Msa0106320:three_prime_UTR | 50.0% | |
| GCAAAGGAGAGAACAAGGGA+AGG | + | chr1_3:15562359-15562378 | Msa0106320:three_prime_UTR | 50.0% | |
| TCTGTACTGCATCTCACCGG+CGG | - | chr1_3:15556675-15556694 | None:intergenic | 55.0% | |
| TGTTGCTGCTGTTGCTGTGG+TGG | - | chr1_3:15556701-15556720 | None:intergenic | 55.0% | |
| GCAGCAGAGGTTTGTGAAGC+CGG | + | chr1_3:15556970-15556989 | Msa0106320:CDS | 55.0% | |
| CAATGGCAGAGGTTTGAGGG+TGG | + | chr1_3:15557019-15557038 | Msa0106320:CDS | 55.0% | |
| CAGAGGTTTGAGGGTGGGAA+TGG | + | chr1_3:15557025-15557044 | Msa0106320:CDS | 55.0% | |
| GAGGGTGGGAATGGTAAGGA+AGG | + | chr1_3:15557034-15557053 | Msa0106320:CDS | 55.0% | |
| AACGTGAGTGGTTCCACCAC+AGG | + | chr1_3:15558402-15558421 | Msa0106320:CDS | 55.0% | |
| TTGTGTATGCCAAGCAGGGC+CGG | + | chr1_3:15559050-15559069 | Msa0106320:intron | 55.0% | |
| TGTTATAGCCCAGCCTCGAC+GGG | - | chr1_3:15559083-15559102 | None:intergenic | 55.0% | |
| GTGTTATAGCCCAGCCTCGA+CGG | - | chr1_3:15559084-15559103 | None:intergenic | 55.0% | |
| TCGAGGCTGGGCTATAACAC+CGG | + | chr1_3:15559084-15559103 | Msa0106320:intron | 55.0% | |
| AACAGGGAGTCCGACATACG+TGG | + | chr1_3:15559673-15559692 | Msa0106320:intron | 55.0% | |
| GGGTGTTCCAATTGCTGACG+TGG | + | chr1_3:15559742-15559761 | Msa0106320:CDS | 55.0% | |
| TGACAGCGTCGTTCAAAGGC+AGG | + | chr1_3:15559771-15559790 | Msa0106320:intron | 55.0% | |
| GCAACATGTAGGGATGGAGC+CGG | - | chr1_3:15561814-15561833 | None:intergenic | 55.0% | |
| ! | ACTGGCGCTGGGACAAACAA+TGG | - | chr1_3:15561853-15561872 | None:intergenic | 55.0% |
| ACAGTCCATCCTGTAGAGCC+AGG | - | chr1_3:15561916-15561935 | None:intergenic | 55.0% | |
| !! | TGGCTCTACAGGATGGACTG+TGG | + | chr1_3:15561915-15561934 | Msa0106320:CDS | 55.0% |
| GATGAGTTAGCAGAGCCAGG+CGG | - | chr1_3:15561997-15562016 | None:intergenic | 55.0% | |
| TGCTGCTGTTGCTGTGGTGG+TGG | - | chr1_3:15556698-15556717 | None:intergenic | 60.0% | |
| GGAAGGGTAGGCAATGGCAG+AGG | + | chr1_3:15557008-15557027 | Msa0106320:CDS | 60.0% | |
| CGAGGCTGGGCTATAACACC+GGG | + | chr1_3:15559085-15559104 | Msa0106320:intron | 60.0% | |
| TAGGATGCGTGGTGGTCCAG+TGG | + | chr1_3:15559204-15559223 | Msa0106320:intron | 60.0% | |
| !! | TCAAGTAACCGGGGTGCTGC+CGG | + | chr1_3:15561792-15561811 | Msa0106320:CDS | 60.0% |
| TGGGAGTTGCAACTGGCGCT+GGG | - | chr1_3:15561864-15561883 | None:intergenic | 60.0% | |
| ATGGGAGTTGCAACTGGCGC+TGG | - | chr1_3:15561865-15561884 | None:intergenic | 60.0% | |
| TCCATCCTGTAGAGCCAGGC+GGG | - | chr1_3:15561912-15561931 | None:intergenic | 60.0% | |
| GTCCATCCTGTAGAGCCAGG+CGG | - | chr1_3:15561913-15561932 | None:intergenic | 60.0% | |
| !! | GATGGACTGTGGCTCCTCCA+AGG | + | chr1_3:15561926-15561945 | Msa0106320:CDS | 60.0% |
| ACTCGAGGAGGAGGATGCCT+TGG | - | chr1_3:15561946-15561965 | None:intergenic | 60.0% | |
| GGAACAACGACTCGAGGAGG+AGG | - | chr1_3:15561955-15561974 | None:intergenic | 60.0% | |
| CCTCCTCGAGTCGTTGTTCC+CGG | + | chr1_3:15561955-15561974 | Msa0106320:CDS | 60.0% | |
| GGAAGGAAGACTCCTGTGCC+GGG | - | chr1_3:15561976-15561995 | None:intergenic | 60.0% | |
| CGGAAGGAAGACTCCTGTGC+CGG | - | chr1_3:15561977-15561996 | None:intergenic | 60.0% | |
| ACAGGAGTCTTCCTTCCGCC+TGG | + | chr1_3:15561979-15561998 | Msa0106320:CDS | 60.0% | |
| AGTTAGCAGAGCCAGGCGGA+AGG | - | chr1_3:15561993-15562012 | None:intergenic | 60.0% | |
| TTTCCGGCGGTGGTTACCGC+CGG | + | chr1_3:15556656-15556675 | Msa0106320:CDS | 65.0% | |
| GGTTGCGTACGCGTTGCAGC+AGG | + | chr1_3:15556934-15556953 | Msa0106320:CDS | 65.0% | |
| TGCGTACGCGTTGCAGCAGG+TGG | + | chr1_3:15556937-15556956 | Msa0106320:CDS | 65.0% | |
| ACACCTGTGCCAATCCCGCC+TGG | + | chr1_3:15561895-15561914 | Msa0106320:CDS | 65.0% | |
| CCTGTAGAGCCAGGCGGGAT+TGG | - | chr1_3:15561907-15561926 | None:intergenic | 65.0% | |
| !! | CCAATCCCGCCTGGCTCTAC+AGG | + | chr1_3:15561904-15561923 | Msa0106320:CDS | 65.0% |
| !! | TCCCGCCTGGCTCTACAGGA+TGG | + | chr1_3:15561908-15561927 | Msa0106320:CDS | 65.0% |
| CGAGGAGGAGGATGCCTTGG+AGG | - | chr1_3:15561943-15561962 | None:intergenic | 65.0% | |
| CCGGGAACAACGACTCGAGG+AGG | - | chr1_3:15561958-15561977 | None:intergenic | 65.0% | |
| GTGCCGGGAACAACGACTCG+AGG | - | chr1_3:15561961-15561980 | None:intergenic | 65.0% | |
| CGAGTCGTTGTTCCCGGCAC+AGG | + | chr1_3:15561961-15561980 | Msa0106320:CDS | 65.0% | |
| TCACCGGCGGTAACCACCGC+CGG | - | chr1_3:15556662-15556681 | None:intergenic | 70.0% | |
| ACGCGTTGCAGCAGGTGGCG+TGG | + | chr1_3:15556942-15556961 | Msa0106320:CDS | 70.0% | |
| CGTTGCAGCAGGTGGCGTGG+AGG | + | chr1_3:15556945-15556964 | Msa0106320:CDS | 70.0% | |
| TGCAGCAGGTGGCGTGGAGG+CGG | + | chr1_3:15556948-15556967 | Msa0106320:CDS | 70.0% | |
| !! | AGCCTCGACGGGCTATGGGC+CGG | - | chr1_3:15559072-15559091 | None:intergenic | 70.0% |
| GCCCATAGCCCGTCGAGGCT+GGG | + | chr1_3:15559072-15559091 | Msa0106320:intron | 70.0% | |
| !! | GCCCAGCCTCGACGGGCTAT+GGG | - | chr1_3:15559076-15559095 | None:intergenic | 70.0% |
| !! | AGCCCAGCCTCGACGGGCTA+TGG | - | chr1_3:15559077-15559096 | None:intergenic | 70.0% |
| ! | GAGCCAGGCGGGATTGGCAC+AGG | - | chr1_3:15561901-15561920 | None:intergenic | 70.0% |
| TGGCGTGGAGGCGGCAGCAG+AGG | + | chr1_3:15556957-15556976 | Msa0106320:CDS | 75.0% | |
| GGCTATGGGCCGGCCCTGCT+TGG | - | chr1_3:15559062-15559081 | None:intergenic | 75.0% | |
| GGCCCATAGCCCGTCGAGGC+TGG | + | chr1_3:15559071-15559090 | Msa0106320:intron | 75.0% | |
| GGATGGAGCCGGCAGCACCC+CGG | - | chr1_3:15561803-15561822 | None:intergenic | 75.0% | |
| ! | GGCCGGCCCATAGCCCGTCG+AGG | + | chr1_3:15559067-15559086 | Msa0106320:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 15556369 | 15562520 | 15556369 | ID=Msa0106320;Name=Msa0106320 |
| chr1_3 | mRNA | 15556369 | 15562520 | 15556369 | ID=Msa0106320-mRNA-1;Parent=Msa0106320;Name=Msa0106320-mRNA-1;_AED=0.30;_eAED=0.30;_QI=242|1|1|1|1|1|8|272|658 |
| chr1_3 | exon | 15556369 | 15557208 | 15556369 | ID=Msa0106320-mRNA-1:exon:5938;Parent=Msa0106320-mRNA-1 |
| chr1_3 | exon | 15557828 | 15557923 | 15557828 | ID=Msa0106320-mRNA-1:exon:5939;Parent=Msa0106320-mRNA-1 |
| chr1_3 | exon | 15558367 | 15558464 | 15558367 | ID=Msa0106320-mRNA-1:exon:5940;Parent=Msa0106320-mRNA-1 |
| chr1_3 | exon | 15558592 | 15558709 | 15558592 | ID=Msa0106320-mRNA-1:exon:5941;Parent=Msa0106320-mRNA-1 |
| chr1_3 | exon | 15559678 | 15559788 | 15559678 | ID=Msa0106320-mRNA-1:exon:5942;Parent=Msa0106320-mRNA-1 |
| chr1_3 | exon | 15559880 | 15559992 | 15559880 | ID=Msa0106320-mRNA-1:exon:5943;Parent=Msa0106320-mRNA-1 |
| chr1_3 | exon | 15560107 | 15560261 | 15560107 | ID=Msa0106320-mRNA-1:exon:5944;Parent=Msa0106320-mRNA-1 |
| chr1_3 | exon | 15561561 | 15562520 | 15561561 | ID=Msa0106320-mRNA-1:exon:5945;Parent=Msa0106320-mRNA-1 |
| chr1_3 | five_prime_UTR | 15556369 | 15556610 | 15556369 | ID=Msa0106320-mRNA-1:five_prime_utr;Parent=Msa0106320-mRNA-1 |
| chr1_3 | CDS | 15556611 | 15557208 | 15556611 | ID=Msa0106320-mRNA-1:cds;Parent=Msa0106320-mRNA-1 |
| chr1_3 | CDS | 15557828 | 15557923 | 15557828 | ID=Msa0106320-mRNA-1:cds;Parent=Msa0106320-mRNA-1 |
| chr1_3 | CDS | 15558367 | 15558464 | 15558367 | ID=Msa0106320-mRNA-1:cds;Parent=Msa0106320-mRNA-1 |
| chr1_3 | CDS | 15558592 | 15558709 | 15558592 | ID=Msa0106320-mRNA-1:cds;Parent=Msa0106320-mRNA-1 |
| chr1_3 | CDS | 15559678 | 15559788 | 15559678 | ID=Msa0106320-mRNA-1:cds;Parent=Msa0106320-mRNA-1 |
| chr1_3 | CDS | 15559880 | 15559992 | 15559880 | ID=Msa0106320-mRNA-1:cds;Parent=Msa0106320-mRNA-1 |
| chr1_3 | CDS | 15560107 | 15560261 | 15560107 | ID=Msa0106320-mRNA-1:cds;Parent=Msa0106320-mRNA-1 |
| chr1_3 | CDS | 15561561 | 15562248 | 15561561 | ID=Msa0106320-mRNA-1:cds;Parent=Msa0106320-mRNA-1 |
| chr1_3 | three_prime_UTR | 15562249 | 15562520 | 15562249 | ID=Msa0106320-mRNA-1:three_prime_utr;Parent=Msa0106320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
