Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234550 | XP_003627441.1 | 92.283 | 622 | 48 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000880 | Msa1234550 | 0.813832 | 2.096213e-51 | -8.615850e-47 |
| Msa0002680 | Msa1234550 | 0.829939 | 3.886983e-55 | -8.615850e-47 |
| Msa0003220 | Msa1234550 | 0.812581 | 3.944166e-51 | -8.615850e-47 |
| Msa0012940 | Msa1234550 | 0.836512 | 8.958286e-57 | -8.615850e-47 |
| Msa0016540 | Msa1234550 | 0.815427 | 9.298767e-52 | -8.615850e-47 |
| Msa0017390 | Msa1234550 | 0.809783 | 1.595318e-50 | -8.615850e-47 |
| Msa0033880 | Msa1234550 | 0.805146 | 1.537037e-49 | -8.615850e-47 |
| Msa0035120 | Msa1234550 | 0.811917 | 5.508465e-51 | -8.615850e-47 |
| Msa0039250 | Msa1234550 | 0.828941 | 6.795409e-55 | -8.615850e-47 |
| Msa0041690 | Msa1234550 | 0.815823 | 7.586815e-52 | -8.615850e-47 |
| Msa0047640 | Msa1234550 | 0.844769 | 6.155921e-59 | -8.615850e-47 |
| Msa0052870 | Msa1234550 | 0.824174 | 9.309376e-54 | -8.615850e-47 |
| Msa0054820 | Msa1234550 | 0.809524 | 1.813853e-50 | -8.615850e-47 |
| Msa0065550 | Msa1234550 | 0.821711 | 3.491194e-53 | -8.615850e-47 |
| Msa0069600 | Msa1234550 | 0.802477 | 5.507624e-49 | -8.615850e-47 |
| Msa0089980 | Msa1234550 | 0.834108 | 3.626260e-56 | -8.615850e-47 |
| Msa0090010 | Msa1234550 | 0.833658 | 4.698262e-56 | -8.615850e-47 |
| Msa0093850 | Msa1234550 | 0.828623 | 8.110343e-55 | -8.615850e-47 |
| Msa0096580 | Msa1234550 | 0.800280 | 1.551765e-48 | -8.615850e-47 |
| Msa0098470 | Msa1234550 | 0.828536 | 8.511634e-55 | -8.615850e-47 |
| Msa0106320 | Msa1234550 | 0.805943 | 1.045777e-49 | -8.615850e-47 |
| Msa0106620 | Msa1234550 | 0.838228 | 3.257832e-57 | -8.615850e-47 |
| Msa0106710 | Msa1234550 | 0.811482 | 6.848649e-51 | -8.615850e-47 |
| Msa0108410 | Msa1234550 | 0.805896 | 1.069637e-49 | -8.615850e-47 |
| Msa0112270 | Msa1234550 | 0.801134 | 1.039102e-48 | -8.615850e-47 |
| Msa0116790 | Msa1234550 | 0.826396 | 2.775312e-54 | -8.615850e-47 |
| Msa0608270 | Msa1234550 | 0.816561 | 5.189215e-52 | -8.615850e-47 |
| Msa0619420 | Msa1234550 | 0.832991 | 6.892159e-56 | -8.615850e-47 |
| Msa0626270 | Msa1234550 | 0.808966 | 2.388981e-50 | -8.615850e-47 |
| Msa0626460 | Msa1234550 | 0.820890 | 5.399950e-53 | -8.615850e-47 |
| Msa0628420 | Msa1234550 | 0.803236 | 3.837963e-49 | -8.615850e-47 |
| Msa0630940 | Msa1234550 | 0.851287 | 9.790746e-61 | -8.615850e-47 |
| Msa0644030 | Msa1234550 | 0.811092 | 8.323882e-51 | -8.615850e-47 |
| Msa0648830 | Msa1234550 | 0.818702 | 1.707324e-52 | -8.615850e-47 |
| Msa0652690 | Msa1234550 | 0.805146 | 1.537037e-49 | -8.615850e-47 |
| Msa0659550 | Msa1234550 | 0.827715 | 1.342559e-54 | -8.615850e-47 |
| Msa0669180 | Msa1234550 | 0.862064 | 6.600376e-64 | -8.615850e-47 |
| Msa0689760 | Msa1234550 | 0.818040 | 2.411985e-52 | -8.615850e-47 |
| Msa0692880 | Msa1234550 | 0.852931 | 3.339364e-61 | -8.615850e-47 |
| Msa0698100 | Msa1234550 | 0.829269 | 5.656806e-55 | -8.615850e-47 |
| Msa0703220 | Msa1234550 | 0.807890 | 4.052158e-50 | -8.615850e-47 |
| Msa0706760 | Msa1234550 | 0.808864 | 2.512050e-50 | -8.615850e-47 |
| Msa0707710 | Msa1234550 | 0.805643 | 1.208961e-49 | -8.615850e-47 |
| Msa0712560 | Msa1234550 | 0.800178 | 1.627733e-48 | -8.615850e-47 |
| Msa0713680 | Msa1234550 | 0.820204 | 7.762072e-53 | -8.615850e-47 |
| Msa0716410 | Msa1234550 | 0.800008 | 1.762593e-48 | -8.615850e-47 |
| Msa0716860 | Msa1234550 | 0.819473 | 1.140117e-52 | -8.615850e-47 |
| Msa0744100 | Msa1234550 | 0.802090 | 6.615527e-49 | -8.615850e-47 |
| Msa0751260 | Msa1234550 | 0.801911 | 7.201131e-49 | -8.615850e-47 |
| Msa0757800 | Msa1234550 | 0.812922 | 3.322894e-51 | -8.615850e-47 |
| Msa0788120 | Msa1234550 | 0.803481 | 3.415766e-49 | -8.615850e-47 |
| Msa0790400 | Msa1234550 | 0.800387 | 1.475811e-48 | -8.615850e-47 |
| Msa0804250 | Msa1234550 | 0.800629 | 1.317499e-48 | -8.615850e-47 |
| Msa0818630 | Msa1234550 | 0.804253 | 2.360733e-49 | -8.615850e-47 |
| Msa0127850 | Msa1234550 | 0.804293 | 2.315797e-49 | -8.615850e-47 |
| Msa0130110 | Msa1234550 | 0.807181 | 5.730280e-50 | -8.615850e-47 |
| Msa0133720 | Msa1234550 | 0.829919 | 3.930774e-55 | -8.615850e-47 |
| Msa0133820 | Msa1234550 | 0.823583 | 1.280990e-53 | -8.615850e-47 |
| Msa0138360 | Msa1234550 | 0.842975 | 1.862163e-58 | -8.615850e-47 |
| Msa0141400 | Msa1234550 | 0.836771 | 7.698936e-57 | -8.615850e-47 |
| Msa0144360 | Msa1234550 | 0.831051 | 2.077590e-55 | -8.615850e-47 |
| Msa0144780 | Msa1234550 | 0.805335 | 1.403210e-49 | -8.615850e-47 |
| Msa0147980 | Msa1234550 | 0.834200 | 3.438885e-56 | -8.615850e-47 |
| Msa0152870 | Msa1234550 | 0.802855 | 4.602654e-49 | -8.615850e-47 |
| Msa0168870 | Msa1234550 | 0.804908 | 1.723733e-49 | -8.615850e-47 |
| Msa0174000 | Msa1234550 | 0.808241 | 3.410967e-50 | -8.615850e-47 |
| Msa0181230 | Msa1234550 | 0.818525 | 1.873562e-52 | -8.615850e-47 |
| Msa0188690 | Msa1234550 | 0.807147 | 5.826090e-50 | -8.615850e-47 |
| Msa0225480 | Msa1234550 | 0.817594 | 3.041030e-52 | -8.615850e-47 |
| Msa0231190 | Msa1234550 | 0.800411 | 1.459342e-48 | -8.615850e-47 |
| Msa0237210 | Msa1234550 | 0.829427 | 5.180193e-55 | -8.615850e-47 |
| Msa1227320 | Msa1234550 | 0.804051 | 2.600790e-49 | -8.615850e-47 |
| Msa1234550 | Msa1253550 | 0.804492 | 2.104637e-49 | -8.615850e-47 |
| Msa1234550 | Msa1261070 | 0.814267 | 1.681022e-51 | -8.615850e-47 |
| Msa1234550 | Msa1277080 | 0.962082 | 1.868797e-120 | -8.615850e-47 |
| Msa1234550 | Msa1278740 | 0.814229 | 1.713095e-51 | -8.615850e-47 |
| Msa1234550 | Msa1317950 | 0.839895 | 1.205067e-57 | -8.615850e-47 |
| Msa1234550 | Msa1317960 | 0.848030 | 7.945510e-60 | -8.615850e-47 |
| Msa1234550 | Msa1329790 | 0.809767 | 1.608305e-50 | -8.615850e-47 |
| Msa1234550 | Msa1335160 | 0.962883 | 2.071061e-121 | -8.615850e-47 |
| Msa1234550 | Msa1344310 | 0.802648 | 5.077444e-49 | -8.615850e-47 |
| Msa1234550 | Msa1348090 | 0.809192 | 2.136289e-50 | -8.615850e-47 |
| Msa1234550 | Msa1352350 | 0.805644 | 1.208225e-49 | -8.615850e-47 |
| Msa1234550 | Msa1356610 | 0.817219 | 3.694300e-52 | -8.615850e-47 |
| Msa1234550 | Msa1369150 | 0.807832 | 4.168748e-50 | -8.615850e-47 |
| Msa1234550 | Msa1369690 | 0.808154 | 3.559533e-50 | -8.615850e-47 |
| Msa1234550 | Msa1371520 | 0.843045 | 1.783365e-58 | -8.615850e-47 |
| Msa1234550 | Msa1373170 | 0.813168 | 2.933488e-51 | -8.615850e-47 |
| Msa1234550 | Msa1373820 | 0.836500 | 9.024673e-57 | -8.615850e-47 |
| Msa1234550 | Msa1393820 | 0.851283 | 9.814840e-61 | -8.615850e-47 |
| Msa1234550 | Msa1403570 | 0.817476 | 3.233700e-52 | -8.615850e-47 |
| Msa1234550 | Msa1411950 | 0.813370 | 2.649324e-51 | -8.615850e-47 |
| Msa1234550 | Msa1418240 | 0.815765 | 7.815864e-52 | -8.615850e-47 |
| Msa1234550 | Msa1420250 | 0.815404 | 9.407374e-52 | -8.615850e-47 |
| Msa1234550 | Msa1443310 | 0.811924 | 5.488331e-51 | -8.615850e-47 |
| Msa1234550 | Msa1450720 | 0.809438 | 1.892291e-50 | -8.615850e-47 |
| Msa1234550 | Msa1459460 | 0.809874 | 1.525246e-50 | -8.615850e-47 |
| Msa1234550 | Msa1462910 | 0.800566 | 1.357033e-48 | -8.615850e-47 |
| Msa0378970 | Msa1234550 | 0.834939 | 2.241948e-56 | -8.615850e-47 |
| Msa0384670 | Msa1234550 | 0.805390 | 1.366186e-49 | -8.615850e-47 |
| Msa0388990 | Msa1234550 | 0.849940 | 2.341187e-60 | -8.615850e-47 |
| Msa0428580 | Msa1234550 | 0.822626 | 2.142452e-53 | -8.615850e-47 |
| Msa0432170 | Msa1234550 | 0.814750 | 1.313948e-51 | -8.615850e-47 |
| Msa0434570 | Msa1234550 | 0.824481 | 7.886435e-54 | -8.615850e-47 |
| Msa0434770 | Msa1234550 | 0.821676 | 3.557365e-53 | -8.615850e-47 |
| Msa0474940 | Msa1234550 | 0.817874 | 2.629880e-52 | -8.615850e-47 |
| Msa0476690 | Msa1234550 | 0.804453 | 2.144732e-49 | -8.615850e-47 |
| Msa0478580 | Msa1234550 | 0.812019 | 5.233637e-51 | -8.615850e-47 |
| Msa0479200 | Msa1234550 | 0.825907 | 3.629455e-54 | -8.615850e-47 |
| Msa0480780 | Msa1234550 | 0.812945 | 3.283012e-51 | -8.615850e-47 |
| Msa1010070 | Msa1234550 | 0.818762 | 1.655126e-52 | -8.615850e-47 |
| Msa1028280 | Msa1234550 | 0.823665 | 1.225873e-53 | -8.615850e-47 |
| Msa1031390 | Msa1234550 | 0.817187 | 3.755029e-52 | -8.615850e-47 |
| Msa1034500 | Msa1234550 | 0.809700 | 1.662340e-50 | -8.615850e-47 |
| Msa1059960 | Msa1234550 | 0.807367 | 5.232101e-50 | -8.615850e-47 |
| Msa1076560 | Msa1234550 | 0.814270 | 1.677794e-51 | -8.615850e-47 |
| Msa1085330 | Msa1234550 | 0.807953 | 3.929548e-50 | -8.615850e-47 |
| Msa1088410 | Msa1234550 | 0.808716 | 2.701630e-50 | -8.615850e-47 |
| Msa1097820 | Msa1234550 | 0.803871 | 2.835161e-49 | -8.615850e-47 |
| Msa1102770 | Msa1234550 | 0.807240 | 5.568834e-50 | -8.615850e-47 |
| Msa1105160 | Msa1234550 | 0.803787 | 2.951150e-49 | -8.615850e-47 |
| Msa0241830 | Msa1234550 | 0.848986 | 4.319563e-60 | -8.615850e-47 |
| Msa0261170 | Msa1234550 | 0.823789 | 1.146153e-53 | -8.615850e-47 |
| Msa0270210 | Msa1234550 | 0.827064 | 1.922888e-54 | -8.615850e-47 |
| Msa0274980 | Msa1234550 | 0.808404 | 3.149460e-50 | -8.615850e-47 |
| Msa0279850 | Msa1234550 | 0.815108 | 1.094572e-51 | -8.615850e-47 |
| Msa0300320 | Msa1234550 | 0.809125 | 2.208907e-50 | -8.615850e-47 |
| Msa0301520 | Msa1234550 | 0.811511 | 6.750117e-51 | -8.615850e-47 |
| Msa0307570 | Msa1234550 | 0.824516 | 7.737147e-54 | -8.615850e-47 |
| Msa0307860 | Msa1234550 | 0.808195 | 3.489854e-50 | -8.615850e-47 |
| Msa0315690 | Msa1234550 | 0.815653 | 8.278596e-52 | -8.615850e-47 |
| Msa0322900 | Msa1234550 | 0.852864 | 3.489370e-61 | -8.615850e-47 |
| Msa0323260 | Msa1234550 | 0.807685 | 4.480438e-50 | -8.615850e-47 |
| Msa0341690 | Msa1234550 | 0.824988 | 5.987463e-54 | -8.615850e-47 |
| Msa0343190 | Msa1234550 | 0.801267 | 9.762254e-49 | -8.615850e-47 |
| Msa0363400 | Msa1234550 | 0.805476 | 1.310857e-49 | -8.615850e-47 |
| Msa1123350 | Msa1234550 | 0.810003 | 1.430261e-50 | -8.615850e-47 |
| Msa1127540 | Msa1234550 | 0.809590 | 1.755468e-50 | -8.615850e-47 |
| Msa1127590 | Msa1234550 | 0.846342 | 2.306215e-59 | -8.615850e-47 |
| Msa1162080 | Msa1234550 | 0.815725 | 7.979220e-52 | -8.615850e-47 |
| Msa1162770 | Msa1234550 | 0.801293 | 9.641316e-49 | -8.615850e-47 |
| Msa1165090 | Msa1234550 | 0.806580 | 7.676964e-50 | -8.615850e-47 |
| Msa1211340 | Msa1234550 | 0.804264 | 2.348188e-49 | -8.615850e-47 |
| Msa1213810 | Msa1234550 | 0.818163 | 2.261847e-52 | -8.615850e-47 |
| Msa1214320 | Msa1234550 | 0.829656 | 4.556379e-55 | -8.615850e-47 |
| Msa1223330 | Msa1234550 | 0.804366 | 2.236062e-49 | -8.615850e-47 |
| Msa0485240 | Msa1234550 | 0.810084 | 1.374211e-50 | -8.615850e-47 |
| Msa0518030 | Msa1234550 | 0.870014 | 2.009062e-66 | -8.615850e-47 |
| Msa0521020 | Msa1234550 | 0.810313 | 1.226408e-50 | -8.615850e-47 |
| Msa0527190 | Msa1234550 | 0.829938 | 3.889731e-55 | -8.615850e-47 |
| Msa0531250 | Msa1234550 | 0.811818 | 5.787316e-51 | -8.615850e-47 |
| Msa0534400 | Msa1234550 | 0.809715 | 1.649950e-50 | -8.615850e-47 |
| Msa0544730 | Msa1234550 | 0.825328 | 4.975906e-54 | -8.615850e-47 |
| Msa0547990 | Msa1234550 | 0.818791 | 1.630422e-52 | -8.615850e-47 |
| Msa0556010 | Msa1234550 | 0.841297 | 5.175376e-58 | -8.615850e-47 |
| Msa0581690 | Msa1234550 | 0.818500 | 1.898067e-52 | -8.615850e-47 |
| Msa0583500 | Msa1234550 | 0.828439 | 8.983599e-55 | -8.615850e-47 |
| Msa0590640 | Msa1234550 | 0.842792 | 2.082548e-58 | -8.615850e-47 |
| Msa0597770 | Msa1234550 | 0.856543 | 2.996436e-62 | -8.615850e-47 |
| Msa0861510 | Msa1234550 | 0.809887 | 1.514812e-50 | -8.615850e-47 |
| Msa0861530 | Msa1234550 | 0.810256 | 1.261656e-50 | -8.615850e-47 |
| Msa0861600 | Msa1234550 | 0.803205 | 3.895991e-49 | -8.615850e-47 |
| Msa0870650 | Msa1234550 | 0.801692 | 7.984773e-49 | -8.615850e-47 |
| Msa0871720 | Msa1234550 | 0.807117 | 5.911636e-50 | -8.615850e-47 |
| Msa0903780 | Msa1234550 | 0.808218 | 3.449757e-50 | -8.615850e-47 |
| Msa0934140 | Msa1234550 | 0.802360 | 5.820564e-49 | -8.615850e-47 |
| Msa0944660 | Msa1234550 | 0.800541 | 1.373172e-48 | -8.615850e-47 |
| Msa0945240 | Msa1234550 | 0.811152 | 8.077964e-51 | -8.615850e-47 |
| Msa0969330 | Msa1234550 | 0.806597 | 7.616121e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234550 | MtrunA17_Chr8g0345071 | 92.283 | 622 | 48 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1187 |
| Msa1234550 | MtrunA17_Chr4g0028881 | 28.814 | 295 | 173 | 9 | 52 | 332 | 592 | 863 | 3.69e-29 | 123 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1234550 | AT5G12260.1 | 52.532 | 632 | 258 | 9 | 4 | 622 | 22 | 624 | 0.0 | 630 |
| Msa1234550 | AT5G60700.1 | 28.986 | 276 | 159 | 7 | 52 | 311 | 324 | 578 | 6.25e-25 | 110 |
| Msa1234550 | AT5G60700.2 | 28.618 | 304 | 170 | 8 | 34 | 311 | 560 | 842 | 9.66e-25 | 110 |
Find 168 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATATTGTAACAAAATTAT+TGG | 0.174626 | 8_2:+11881572 | Msa1234550:CDS |
| TTTGATAAGGAAAGTAAAAT+TGG | 0.192453 | 8_2:-11877903 | None:intergenic |
| AAAGAATATGTAAGCTAAAT+TGG | 0.209161 | 8_2:-11881891 | None:intergenic |
| AATCGAATCGAGGAGAATTT+TGG | 0.214428 | 8_2:+11878069 | Msa1234550:CDS |
| TATAAGGAATTATATACTTA+TGG | 0.233682 | 8_2:+11881143 | Msa1234550:CDS |
| GATGGGTTTGAGTGGAAATA+TGG | 0.234846 | 8_2:+11878100 | Msa1234550:CDS |
| ATCCCTAGACTTCAATATTC+TGG | 0.256622 | 8_2:+11880921 | Msa1234550:CDS |
| TGTAGCCATGGCCGACTCTT+TGG | 0.269350 | 8_2:+11881509 | Msa1234550:CDS |
| CTGAACTCTTTCCATGGCTT+TGG | 0.280942 | 8_2:-11880536 | None:intergenic |
| AGCCTTTGAGTAGTTTAAAA+TGG | 0.295749 | 8_2:+11880950 | Msa1234550:CDS |
| AGAAACATTGCTTGCAGGTT+AGG | 0.296890 | 8_2:-11877708 | None:intergenic |
| AACTGGGAATGTGGGGTTGC+AGG | 0.304283 | 8_2:+11878144 | Msa1234550:CDS |
| GTAGCCATGGCCGACTCTTT+GGG | 0.306253 | 8_2:+11881510 | Msa1234550:CDS |
| TAAGTATAACACATGGGTTT+TGG | 0.306286 | 8_2:+11881338 | Msa1234550:CDS |
| TTCCAATGCTAGTTACAAAT+TGG | 0.318749 | 8_2:-11881227 | None:intergenic |
| AACGGAGTCAAGGCGGTTAA+AGG | 0.323886 | 8_2:-11877933 | None:intergenic |
| CAAAGCCATGGAAAGAGTTC+AGG | 0.324713 | 8_2:+11880537 | Msa1234550:CDS |
| AGAGTTGATGAGACTTCTTT+TGG | 0.347350 | 8_2:+11881618 | Msa1234550:CDS |
| AATTGGTCTACATTGATTAC+AGG | 0.347667 | 8_2:-11881210 | None:intergenic |
| TTGATAAGGAAAGTAAAATT+GGG | 0.349088 | 8_2:-11877902 | None:intergenic |
| GTGTTAGTAAATCTTCTATA+GGG | 0.357806 | 8_2:+11881661 | Msa1234550:CDS |
| TGGTTGGAGGCATGGTGGCC+TGG | 0.368096 | 8_2:+11878172 | Msa1234550:CDS |
| GATTCAGAAACATTGCTTGC+AGG | 0.368545 | 8_2:-11877713 | None:intergenic |
| ATGAGGGTGATGAAGATTAT+TGG | 0.369770 | 8_2:-11877764 | None:intergenic |
| CAACGTGCAAGGTTTGTTCC+AGG | 0.371232 | 8_2:+11878334 | Msa1234550:CDS |
| TCCTCTAGTAACTGAGAATC+AGG | 0.386913 | 8_2:-11880895 | None:intergenic |
| ATTGTGAATTTCTATTATAA+TGG | 0.387193 | 8_2:+11878274 | Msa1234550:CDS |
| ATAAGGAATTATATACTTAT+GGG | 0.390689 | 8_2:+11881144 | Msa1234550:CDS |
| ACTTTGAGAGGCTAAATATA+AGG | 0.395045 | 8_2:+11881127 | Msa1234550:CDS |
| CATCGTCTAGTGAGAAAATC+TGG | 0.398816 | 8_2:+11881463 | Msa1234550:CDS |
| GAAACATTGCTTGCAGGTTA+GGG | 0.400532 | 8_2:-11877707 | None:intergenic |
| GGGATAGAAAGTTGGTATAT+TGG | 0.404991 | 8_2:+11881682 | Msa1234550:CDS |
| GGAACGGAGGCAACGGGAAA+CGG | 0.405809 | 8_2:-11877951 | None:intergenic |
| TTTCCAGAATATTGAAGTCT+AGG | 0.406075 | 8_2:-11880924 | None:intergenic |
| GAGTTCCTCACAAACCTTCC+CGG | 0.413102 | 8_2:-11881000 | None:intergenic |
| ATTACCATCCCCTCAAGAAA+TGG | 0.420016 | 8_2:-11880596 | None:intergenic |
| AATAATAAATTGACTTTGCA+AGG | 0.420449 | 8_2:+11881249 | Msa1234550:CDS |
| AAGGTGGTGCATTATAGAAC+TGG | 0.428956 | 8_2:+11878127 | Msa1234550:CDS |
| CAATGTACTCACTTCAAAAC+AGG | 0.436407 | 8_2:-11877624 | None:intergenic |
| AGCGAGGGAACGGAGGCAAC+GGG | 0.438756 | 8_2:-11877957 | None:intergenic |
| GACCAATTTGTAACTAGCAT+TGG | 0.442136 | 8_2:+11881225 | Msa1234550:CDS |
| GTGAGGAACTCCGAAGAACT+TGG | 0.447431 | 8_2:+11881012 | Msa1234550:CDS |
| GGGGTTGCAGGCACAGTGGT+TGG | 0.448074 | 8_2:+11878156 | Msa1234550:CDS |
| ATGGGTTTGAGTGGAAATAT+GGG | 0.448133 | 8_2:+11878101 | Msa1234550:CDS |
| CTCGAGCAATACGTCGGAAG+TGG | 0.448985 | 8_2:-11881376 | None:intergenic |
| GGTGTTAGTAAATCTTCTAT+AGG | 0.449571 | 8_2:+11881660 | Msa1234550:CDS |
| TGTTGTAGAGGATGATTTGG+AGG | 0.455071 | 8_2:+11878216 | Msa1234550:CDS |
| AAGTAAAGTTCCAAGTTCTT+CGG | 0.458975 | 8_2:-11881022 | None:intergenic |
| TTACAATATACACAAAACTT+AGG | 0.462586 | 8_2:-11881560 | None:intergenic |
| GTTGCAGGCACAGTGGTTGG+AGG | 0.462772 | 8_2:+11878159 | Msa1234550:CDS |
| CACAAAACTTAGGCTACCTT+GGG | 0.463096 | 8_2:-11881550 | None:intergenic |
| ACACAAAACTTAGGCTACCT+TGG | 0.465958 | 8_2:-11881551 | None:intergenic |
| CGACATCGGAATTGTTCAAA+GGG | 0.466541 | 8_2:-11878036 | None:intergenic |
| TGCAACACAGAAGTCGTAGT+TGG | 0.468556 | 8_2:-11881409 | None:intergenic |
| ATTCCTTAGTTGATCTGTCC+AGG | 0.469134 | 8_2:+11881178 | Msa1234550:CDS |
| AGGCACAGTGGTTGGAGGCA+TGG | 0.469818 | 8_2:+11878164 | Msa1234550:CDS |
| TTAGATTCGGTGATTGAAGA+TGG | 0.470264 | 8_2:-11877824 | None:intergenic |
| GGCAATAAACCATTTCTTGA+GGG | 0.470270 | 8_2:+11880587 | Msa1234550:CDS |
| TAAAGGCGAGAACTTTGATA+AGG | 0.475210 | 8_2:-11877916 | None:intergenic |
| GCAACACAGAAGTCGTAGTT+GGG | 0.475359 | 8_2:-11881408 | None:intergenic |
| TACCAGTTGGTTGGTACGTG+GGG | 0.476158 | 8_2:+11880500 | Msa1234550:CDS |
| TAGCGAGGGAACGGAGGCAA+CGG | 0.477025 | 8_2:-11877958 | None:intergenic |
| GTAAACTACGGGAAAACTGC+TGG | 0.477601 | 8_2:+11880871 | Msa1234550:CDS |
| ATCAAGTTTATTCAATCCCA+TGG | 0.479740 | 8_2:+11880781 | Msa1234550:CDS |
| TACAGGTTGGTATAAGAAGA+TGG | 0.482010 | 8_2:+11880732 | Msa1234550:CDS |
| GGTACAAGAAAAGCCGTGTC+TGG | 0.487955 | 8_2:-11880481 | None:intergenic |
| TGTGAAATTAGGGTTAGATT+CGG | 0.488066 | 8_2:-11877837 | None:intergenic |
| CTACACTACTAAGGTGTAAG+TGG | 0.489343 | 8_2:-11877596 | None:intergenic |
| CAGGACAAGCTACACTACTA+AGG | 0.495147 | 8_2:-11877605 | None:intergenic |
| AGTGTCTCTCACAGAGATGC+TGG | 0.499752 | 8_2:+11880847 | Msa1234550:CDS |
| CATTATAGAACTGGGAATGT+GGG | 0.500233 | 8_2:+11878136 | Msa1234550:CDS |
| GGCTCAAAGAGTTGAATTTG+TGG | 0.504607 | 8_2:+11881739 | Msa1234550:CDS |
| ATGTGAGGCTTAAGATAGAC+TGG | 0.506086 | 8_2:+11881956 | Msa1234550:three_prime_UTR |
| TTCCAGAATATTGAAGTCTA+GGG | 0.508242 | 8_2:-11880923 | None:intergenic |
| TAAACCATTTCTTGAGGGGA+TGG | 0.511562 | 8_2:+11880592 | Msa1234550:CDS |
| TTCTATAGGGGATAGAAAGT+TGG | 0.511950 | 8_2:+11881674 | Msa1234550:CDS |
| TAGATTCGGTGATTGAAGAT+GGG | 0.513385 | 8_2:-11877823 | None:intergenic |
| TTGTTTCAGAGAAGTACGTC+CGG | 0.518864 | 8_2:+11880981 | Msa1234550:CDS |
| GATTACAGGATGTCCCCTCC+TGG | 0.522682 | 8_2:-11881196 | None:intergenic |
| GTGACAAACCACAGCAGTGC+AGG | 0.523193 | 8_2:-11881781 | None:intergenic |
| GGTATATTGGTCAACTGAGA+TGG | 0.527978 | 8_2:+11881695 | Msa1234550:CDS |
| TGATAAGGAAAGTAAAATTG+GGG | 0.529776 | 8_2:-11877901 | None:intergenic |
| TGTACCAGTTGGTTGGTACG+TGG | 0.531077 | 8_2:+11880498 | Msa1234550:CDS |
| GTACCAGTTGGTTGGTACGT+GGG | 0.532663 | 8_2:+11880499 | Msa1234550:CDS |
| ACTTATTATGCAACTTTGAG+AGG | 0.533453 | 8_2:+11881115 | Msa1234550:CDS |
| CCTCCTGGACAGATCAACTA+AGG | 0.538149 | 8_2:-11881181 | None:intergenic |
| GCATTATAGAACTGGGAATG+TGG | 0.539284 | 8_2:+11878135 | Msa1234550:CDS |
| ACAGGTTGGTATAAGAAGAT+GGG | 0.539416 | 8_2:+11880733 | Msa1234550:CDS |
| TTTCTGGTTGCAGGTAAACA+TGG | 0.542336 | 8_2:+11880437 | Msa1234550:intron |
| GGCAACGGGAAACGGAGTCA+AGG | 0.544053 | 8_2:-11877943 | None:intergenic |
| TTGGTCAACTGAGATGGAGC+TGG | 0.544199 | 8_2:+11881701 | Msa1234550:CDS |
| AGCTGGAATCGATTCAGAAA+CGG | 0.546858 | 8_2:+11881718 | Msa1234550:CDS |
| GGCATGAAGATTGGTTCAGA+TGG | 0.547588 | 8_2:+11881639 | Msa1234550:CDS |
| TATCAATGGTATTGTGGCCA+AGG | 0.547652 | 8_2:+11881287 | Msa1234550:CDS |
| GATCAATGTAAACATGGAGG+TGG | 0.553596 | 8_2:-11878006 | None:intergenic |
| CACAACCTGAACTCTTTCCA+TGG | 0.556620 | 8_2:-11880542 | None:intergenic |
| CACAGTGGTTGGAGGCATGG+TGG | 0.556833 | 8_2:+11878167 | Msa1234550:CDS |
| AAATTCTCTTTCCAAAGCCA+TGG | 0.558733 | 8_2:+11880525 | Msa1234550:CDS |
| GGGTGATGAAGATTATTGGA+AGG | 0.559561 | 8_2:-11877760 | None:intergenic |
| TGAGTGGAAATATGGGGAAA+AGG | 0.559973 | 8_2:+11878108 | Msa1234550:CDS |
| CAAATTAAGTTGCCAATGTG+AGG | 0.562445 | 8_2:+11881941 | Msa1234550:three_prime_UTR |
| CGAGGTAATCTGCGGTAGCG+AGG | 0.563235 | 8_2:-11877973 | None:intergenic |
| ACAAAATTATTGGAACAGAA+TGG | 0.563402 | 8_2:+11881582 | Msa1234550:CDS |
| AAGCAATGTTTCTGAATCAA+TGG | 0.564515 | 8_2:+11877718 | Msa1234550:exon |
| TCGAGCAATACGTCGGAAGT+GGG | 0.564902 | 8_2:-11881375 | None:intergenic |
| CATAGATATTAAAGTAACCA+TGG | 0.565495 | 8_2:-11880798 | None:intergenic |
| GTGCTACATTGCAACGTGCA+AGG | 0.565901 | 8_2:+11878323 | Msa1234550:CDS |
| GGGCAATAAACCATTTCTTG+AGG | 0.565913 | 8_2:+11880586 | Msa1234550:CDS |
| TCGACATCGGAATTGTTCAA+AGG | 0.568583 | 8_2:-11878037 | None:intergenic |
| TTAGTTGATCTGTCCAGGAG+GGG | 0.569329 | 8_2:+11881183 | Msa1234550:CDS |
| TAGCCATGGCCGACTCTTTG+GGG | 0.570869 | 8_2:+11881511 | Msa1234550:CDS |
| TCGAGAATTGAGACTATCAA+TGG | 0.571836 | 8_2:+11881273 | Msa1234550:CDS |
| TCTCCCCAAAGAGTCGGCCA+TGG | 0.572603 | 8_2:-11881514 | None:intergenic |
| TGAGACTATCAATGGTATTG+TGG | 0.572970 | 8_2:+11881281 | Msa1234550:CDS |
| CGTGTCGAAAATTGTAGCCA+TGG | 0.573375 | 8_2:+11881497 | Msa1234550:CDS |
| AGAGATGCTGGAGTAAACTA+CGG | 0.576521 | 8_2:+11880859 | Msa1234550:CDS |
| AATCTGCGGTAGCGAGGGAA+CGG | 0.577455 | 8_2:-11877967 | None:intergenic |
| TGTTTCAGAGAAGTACGTCC+GGG | 0.579351 | 8_2:+11880982 | Msa1234550:CDS |
| CAATGTTTCTGAATCAATGG+TGG | 0.580708 | 8_2:+11877721 | Msa1234550:exon |
| TGAGTTATCCTGCACTGCTG+TGG | 0.583109 | 8_2:+11881773 | Msa1234550:CDS |
| GATTAATTTCAAATCGACAT+CGG | 0.585392 | 8_2:-11878050 | None:intergenic |
| ACATGGCAACAAGTTGCAGT+TGG | 0.586027 | 8_2:+11880454 | Msa1234550:CDS |
| AGATCAACTAAGGAATCAGA+TGG | 0.589175 | 8_2:-11881171 | None:intergenic |
| TACACTACTAAGGTGTAAGT+GGG | 0.591524 | 8_2:-11877595 | None:intergenic |
| TCAGAGAAGTACGTCCGGGA+AGG | 0.592231 | 8_2:+11880986 | Msa1234550:CDS |
| GAGGTAATCTGCGGTAGCGA+GGG | 0.592429 | 8_2:-11877972 | None:intergenic |
| CATGGAAAGAGTTCAGGTTG+TGG | 0.593334 | 8_2:+11880543 | Msa1234550:CDS |
| CAGGTTGGTATAAGAAGATG+GGG | 0.594384 | 8_2:+11880734 | Msa1234550:CDS |
| CTTAGTTGATCTGTCCAGGA+GGG | 0.596904 | 8_2:+11881182 | Msa1234550:CDS |
| AGTGAGAAAATCTGGACCAA+TGG | 0.598068 | 8_2:+11881471 | Msa1234550:CDS |
| TGCAGTTGGATGACCAGACA+CGG | 0.604167 | 8_2:+11880468 | Msa1234550:CDS |
| CTGCGGTAGCGAGGGAACGG+AGG | 0.606642 | 8_2:-11877964 | None:intergenic |
| GGGAGAGAATATGGACACCT+TGG | 0.608370 | 8_2:+11880755 | Msa1234550:CDS |
| GTAGAAGATGAATGCAATGA+GGG | 0.610191 | 8_2:-11877780 | None:intergenic |
| GCAATAAACCATTTCTTGAG+GGG | 0.614967 | 8_2:+11880588 | Msa1234550:CDS |
| ATAGATATTAAAGTAACCAT+GGG | 0.616127 | 8_2:-11880797 | None:intergenic |
| AGGTGGTGCATTATAGAACT+GGG | 0.617157 | 8_2:+11878128 | Msa1234550:CDS |
| GAGATGCTGGAGTAAACTAC+GGG | 0.619627 | 8_2:+11880860 | Msa1234550:CDS |
| TGAATAAACTTGATGAACCA+AGG | 0.620022 | 8_2:-11880772 | None:intergenic |
| TAAAATGATCAATGTAAACA+TGG | 0.621057 | 8_2:-11878012 | None:intergenic |
| GCAAACTCATCATCTGAACC+AGG | 0.624097 | 8_2:-11878190 | None:intergenic |
| CTCGCTACCGCAGATTACCT+CGG | 0.624278 | 8_2:+11877974 | Msa1234550:CDS |
| ATGTGGGGTTGCAGGCACAG+TGG | 0.624568 | 8_2:+11878152 | Msa1234550:CDS |
| AATGTTTCTGAATCAATGGT+GGG | 0.632448 | 8_2:+11877722 | Msa1234550:exon |
| ACCTGATTCTCAGTTACTAG+AGG | 0.633008 | 8_2:+11880894 | Msa1234550:CDS |
| TGTTAGTAAATCTTCTATAG+GGG | 0.633783 | 8_2:+11881662 | Msa1234550:CDS |
| TCAACTAAGGAATCAGATGG+AGG | 0.634530 | 8_2:-11881168 | None:intergenic |
| ATTTGAAATTAATCGAATCG+AGG | 0.635294 | 8_2:+11878059 | Msa1234550:CDS |
| CAACTAAGGAATCAGATGGA+GGG | 0.635405 | 8_2:-11881167 | None:intergenic |
| TGGGTTTGAGTGGAAATATG+GGG | 0.640050 | 8_2:+11878102 | Msa1234550:CDS |
| TCGAAAGTAAGTATAACACA+TGG | 0.642011 | 8_2:+11881331 | Msa1234550:CDS |
| TACGTCCGGGAAGGTTTGTG+AGG | 0.642856 | 8_2:+11880995 | Msa1234550:CDS |
| CGAAAGTAAGTATAACACAT+GGG | 0.644749 | 8_2:+11881332 | Msa1234550:CDS |
| ACCAGTTGGTTGGTACGTGG+GGG | 0.646304 | 8_2:+11880501 | Msa1234550:CDS |
| GTCTATCTTAAGCCTCACAT+TGG | 0.650652 | 8_2:-11881953 | None:intergenic |
| TCTAGACTCGAGCAATACGT+CGG | 0.655138 | 8_2:-11881382 | None:intergenic |
| GTGGAAATATGGGGAAAAGG+TGG | 0.657369 | 8_2:+11878111 | Msa1234550:CDS |
| GATAAGGAAAGTAAAATTGG+GGG | 0.658590 | 8_2:-11877900 | None:intergenic |
| AGAAAAGACTCATCAACCCA+AGG | 0.660215 | 8_2:+11881534 | Msa1234550:CDS |
| GGAGGTGGACGCGATCGCCG+AGG | 0.671713 | 8_2:-11877991 | None:intergenic |
| ATTATAGAACTGGGAATGTG+GGG | 0.673105 | 8_2:+11878137 | Msa1234550:CDS |
| AATGATCAATGTAAACATGG+AGG | 0.690634 | 8_2:-11878009 | None:intergenic |
| TGTAGAAGATGAATGCAATG+AGG | 0.693890 | 8_2:-11877781 | None:intergenic |
| CCTTAGTTGATCTGTCCAGG+AGG | 0.697637 | 8_2:+11881181 | Msa1234550:CDS |
| AACGGGAAACGGAGTCAAGG+CGG | 0.705636 | 8_2:-11877940 | None:intergenic |
| GCGATCGCCGAGGTAATCTG+CGG | 0.722123 | 8_2:-11877981 | None:intergenic |
| GACATCGGAATTGTTCAAAG+GGG | 0.736359 | 8_2:-11878035 | None:intergenic |
| AGGTTGGTATAAGAAGATGG+GGG | 0.761473 | 8_2:+11880735 | Msa1234550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAACTCAATTAATAT+AGG | - | chr8_2:11881859-11881878 | None:intergenic | 10.0% |
| !! | ATTGTGAATTTCTATTATAA+TGG | + | chr8_2:11878274-11878293 | Msa1234550:CDS | 15.0% |
| !! | TATATAAAAGATCATTAGAT+AGG | + | chr8_2:11878651-11878670 | Msa1234550:intron | 15.0% |
| !! | ATATAAAAGATCATTAGATA+GGG | + | chr8_2:11878652-11878671 | Msa1234550:intron | 15.0% |
| !! | AATATAAGATTATTGGATAA+AGG | + | chr8_2:11878865-11878884 | Msa1234550:intron | 15.0% |
| !! | TCAAAATTAATAAAGAGTAA+AGG | - | chr8_2:11880116-11880135 | None:intergenic | 15.0% |
| !! | TATAAGGAATTATATACTTA+TGG | + | chr8_2:11881143-11881162 | Msa1234550:CDS | 15.0% |
| !! | ATAAGGAATTATATACTTAT+GGG | + | chr8_2:11881144-11881163 | Msa1234550:CDS | 15.0% |
| !! | GTATATTGTAACAAAATTAT+TGG | + | chr8_2:11881572-11881591 | Msa1234550:CDS | 15.0% |
| !! | TTGATAAGGAAAGTAAAATT+GGG | - | chr8_2:11877905-11877924 | None:intergenic | 20.0% |
| !! | TTTGATAAGGAAAGTAAAAT+TGG | - | chr8_2:11877906-11877925 | None:intergenic | 20.0% |
| !! | TAAAATGATCAATGTAAACA+TGG | - | chr8_2:11878015-11878034 | None:intergenic | 20.0% |
| !! | CAAAGTAAACAAAAACAAAA+TGG | - | chr8_2:11878362-11878381 | None:intergenic | 20.0% |
| !!! | ATCAGGAATTTTATAGAAAA+AGG | + | chr8_2:11878938-11878957 | Msa1234550:intron | 20.0% |
| !! | TGAGAAGATATAATAGAAAT+AGG | + | chr8_2:11879095-11879114 | Msa1234550:intron | 20.0% |
| !! | ATATAATAGAAATAGGTGTA+AGG | + | chr8_2:11879102-11879121 | Msa1234550:intron | 20.0% |
| !! | TATAATAGAAATAGGTGTAA+GGG | + | chr8_2:11879103-11879122 | Msa1234550:intron | 20.0% |
| !!! | TAATTTAAAACGTTTCACAA+GGG | + | chr8_2:11879282-11879301 | Msa1234550:intron | 20.0% |
| !!! | TTTTAAAAACACTGTTTTTC+TGG | - | chr8_2:11879759-11879778 | None:intergenic | 20.0% |
| !! | TTTAAAAATCCATAATACCA+TGG | + | chr8_2:11879772-11879791 | Msa1234550:intron | 20.0% |
| !! | AATTAATAAAGAGTAAAGGA+TGG | - | chr8_2:11880112-11880131 | None:intergenic | 20.0% |
| !! | GCATCATTATTCAAAATTAA+TGG | - | chr8_2:11880231-11880250 | None:intergenic | 20.0% |
| !! | TACATAAGTTAACCAAAAAT+GGG | - | chr8_2:11880330-11880349 | None:intergenic | 20.0% |
| !! | ATACATAAGTTAACCAAAAA+TGG | - | chr8_2:11880331-11880350 | None:intergenic | 20.0% |
| !! | AAAATTTCAGAACTACTATT+AGG | - | chr8_2:11880701-11880720 | None:intergenic | 20.0% |
| !! | ATAGATATTAAAGTAACCAT+GGG | - | chr8_2:11880800-11880819 | None:intergenic | 20.0% |
| !!! | AATAATAAATTGACTTTGCA+AGG | + | chr8_2:11881249-11881268 | Msa1234550:CDS | 20.0% |
| !! | TTACAATATACACAAAACTT+AGG | - | chr8_2:11881563-11881582 | None:intergenic | 20.0% |
| !! | AAAGAATATGTAAGCTAAAT+TGG | - | chr8_2:11881894-11881913 | None:intergenic | 20.0% |
| !!! | AATTAGGGTTTTTTGGAATT+GGG | - | chr8_2:11877871-11877890 | None:intergenic | 25.0% |
| !!! | ATTGTTGAATTAGGGTTTTT+TGG | - | chr8_2:11877878-11877897 | None:intergenic | 25.0% |
| ! | TGATAAGGAAAGTAAAATTG+GGG | - | chr8_2:11877904-11877923 | None:intergenic | 25.0% |
| ! | GATTAATTTCAAATCGACAT+CGG | - | chr8_2:11878053-11878072 | None:intergenic | 25.0% |
| !! | ATTTGAAATTAATCGAATCG+AGG | + | chr8_2:11878059-11878078 | Msa1234550:CDS | 25.0% |
| !! | AGAATTTTGGATTTTGTTGA+TGG | + | chr8_2:11878082-11878101 | Msa1234550:CDS | 25.0% |
| !! | GAATTTTGGATTTTGTTGAT+GGG | + | chr8_2:11878083-11878102 | Msa1234550:CDS | 25.0% |
| !! | AATTATAGTCCTTCCATTTT+TGG | + | chr8_2:11878301-11878320 | Msa1234550:CDS | 25.0% |
| !! | GTTTTTACACTGTGATTTAT+AGG | + | chr8_2:11878417-11878436 | Msa1234550:intron | 25.0% |
| ! | GTGATTTATAGGTATAATAC+AGG | + | chr8_2:11878428-11878447 | Msa1234550:intron | 25.0% |
| !!! | AAACCAAGGCTTTTTTATAA+GGG | - | chr8_2:11878603-11878622 | None:intergenic | 25.0% |
| !!! | AAAACCAAGGCTTTTTTATA+AGG | - | chr8_2:11878604-11878623 | None:intergenic | 25.0% |
| !!! | TATAAAAAAGCCTTGGTTTT+AGG | + | chr8_2:11878604-11878623 | Msa1234550:intron | 25.0% |
| !!! | GTTGTCTACAATTTTTTACT+AGG | + | chr8_2:11878887-11878906 | Msa1234550:intron | 25.0% |
| !!! | TACAATTTTTTACTAGGAGT+GGG | + | chr8_2:11878893-11878912 | Msa1234550:intron | 25.0% |
| !!! | CTTGTGAAACGTTTTAAATT+AGG | - | chr8_2:11879283-11879302 | None:intergenic | 25.0% |
| !! | CTAATTTAAAACGTTTCACA+AGG | + | chr8_2:11879281-11879300 | Msa1234550:intron | 25.0% |
| !! | GCTAAACTTTTATTAATACG+CGG | + | chr8_2:11879675-11879694 | Msa1234550:intron | 25.0% |
| ! | ACATAAGTTAACCAAAAATG+GGG | - | chr8_2:11880329-11880348 | None:intergenic | 25.0% |
| ! | ATTTCTGTACAGTTTATTGA+TGG | + | chr8_2:11880405-11880424 | Msa1234550:intron | 25.0% |
| !! | CAGTTTATTGATGGTATAAT+TGG | + | chr8_2:11880414-11880433 | Msa1234550:intron | 25.0% |
| !!! | GTAGTTCTGAAATTTTTTAC+AGG | + | chr8_2:11880705-11880724 | Msa1234550:intron | 25.0% |
| ! | CATAGATATTAAAGTAACCA+TGG | - | chr8_2:11880801-11880820 | None:intergenic | 25.0% |
| !! | AACCATTTTAAACTACTCAA+AGG | - | chr8_2:11880955-11880974 | None:intergenic | 25.0% |
| !! | ATCTTCTTAGTAGATCTTTT+AGG | + | chr8_2:11881069-11881088 | Msa1234550:CDS | 25.0% |
| !! | TCTTCTTAGTAGATCTTTTA+GGG | + | chr8_2:11881070-11881089 | Msa1234550:CDS | 25.0% |
| !!! | CTTTTTAATTACATAAGCCT+TGG | - | chr8_2:11881307-11881326 | None:intergenic | 25.0% |
| ! | ACAAAATTATTGGAACAGAA+TGG | + | chr8_2:11881582-11881601 | Msa1234550:CDS | 25.0% |
| ! | GTGTTAGTAAATCTTCTATA+GGG | + | chr8_2:11881661-11881680 | Msa1234550:CDS | 25.0% |
| ! | TGTTAGTAAATCTTCTATAG+GGG | + | chr8_2:11881662-11881681 | Msa1234550:CDS | 25.0% |
| ! | AAGCAATGTTTCTGAATCAA+TGG | + | chr8_2:11877718-11877737 | Msa1234550:exon | 30.0% |
| ! | AATGTTTCTGAATCAATGGT+GGG | + | chr8_2:11877722-11877741 | Msa1234550:exon | 30.0% |
| TGTGAAATTAGGGTTAGATT+CGG | - | chr8_2:11877840-11877859 | None:intergenic | 30.0% | |
| !! | GGGATTTTAGTGTGAAATTA+GGG | - | chr8_2:11877850-11877869 | None:intergenic | 30.0% |
| !!! | ATTAGGGTTTTTTGGAATTG+GGG | - | chr8_2:11877870-11877889 | None:intergenic | 30.0% |
| !!! | GAATTAGGGTTTTTTGGAAT+TGG | - | chr8_2:11877872-11877891 | None:intergenic | 30.0% |
| GATAAGGAAAGTAAAATTGG+GGG | - | chr8_2:11877903-11877922 | None:intergenic | 30.0% | |
| AATGATCAATGTAAACATGG+AGG | - | chr8_2:11878012-11878031 | None:intergenic | 30.0% | |
| !! | TTTTGTTGTAGAGGATGATT+TGG | + | chr8_2:11878213-11878232 | Msa1234550:CDS | 30.0% |
| AACAAAAACAAAATGGTACC+TGG | - | chr8_2:11878355-11878374 | None:intergenic | 30.0% | |
| !! | ATGAAGTAGACTTGTTACAA+TGG | + | chr8_2:11878389-11878408 | Msa1234550:intron | 30.0% |
| ATTACTTGAACCTAAAACCA+AGG | - | chr8_2:11878617-11878636 | None:intergenic | 30.0% | |
| CCAATAACCAATCTCTTTAT+TGG | - | chr8_2:11878818-11878837 | None:intergenic | 30.0% | |
| ! | CCAATAAAGAGATTGGTTAT+TGG | + | chr8_2:11878815-11878834 | Msa1234550:intron | 30.0% |
| !!! | CTACAATTTTTTACTAGGAG+TGG | + | chr8_2:11878892-11878911 | Msa1234550:intron | 30.0% |
| TCAGTTTATTCTTCGATATC+AGG | + | chr8_2:11878921-11878940 | Msa1234550:intron | 30.0% | |
| ATAATGTATGCTTAGCATGT+TGG | + | chr8_2:11879155-11879174 | Msa1234550:intron | 30.0% | |
| TTCAAAAACCAGACAAACAA+TGG | - | chr8_2:11879181-11879200 | None:intergenic | 30.0% | |
| !!! | ATTGTTTGTCTGGTTTTTGA+AGG | + | chr8_2:11879180-11879199 | Msa1234550:intron | 30.0% |
| !!! | TTGTTTGTCTGGTTTTTGAA+GGG | + | chr8_2:11879181-11879200 | Msa1234550:intron | 30.0% |
| TCAATTCTGCTAATGATATC+TGG | + | chr8_2:11879238-11879257 | Msa1234550:intron | 30.0% | |
| CAATTCTGCTAATGATATCT+GGG | + | chr8_2:11879239-11879258 | Msa1234550:intron | 30.0% | |
| AATTCTGCTAATGATATCTG+GGG | + | chr8_2:11879240-11879259 | Msa1234550:intron | 30.0% | |
| GATTGACAATCATAACAACA+AGG | - | chr8_2:11879443-11879462 | None:intergenic | 30.0% | |
| AATTATCTCTTTGGTCTGTT+GGG | - | chr8_2:11880015-11880034 | None:intergenic | 30.0% | |
| TAATTATCTCTTTGGTCTGT+TGG | - | chr8_2:11880016-11880035 | None:intergenic | 30.0% | |
| GTTGGGTTTAATTATCTCTT+TGG | - | chr8_2:11880024-11880043 | None:intergenic | 30.0% | |
| TAATAAAGAGTAAAGGATGG+TGG | - | chr8_2:11880109-11880128 | None:intergenic | 30.0% | |
| ! | TTACGTTTTCTTGTGTACTA+AGG | + | chr8_2:11880174-11880193 | Msa1234550:intron | 30.0% |
| AAAAGGGTTCAAAAGTTACA+TGG | - | chr8_2:11880253-11880272 | None:intergenic | 30.0% | |
| GAAGTATAGCACAATTAGAA+AGG | - | chr8_2:11880370-11880389 | None:intergenic | 30.0% | |
| ! | TTGATGGTATAATTGGTTTC+TGG | + | chr8_2:11880421-11880440 | Msa1234550:intron | 30.0% |
| TATGACAAAAACAAGGCAAA+GGG | + | chr8_2:11880566-11880585 | Msa1234550:CDS | 30.0% | |
| !!! | AATTTTTTACAGGTGACTAC+AGG | + | chr8_2:11880715-11880734 | Msa1234550:intron | 30.0% |
| TGAATAAACTTGATGAACCA+AGG | - | chr8_2:11880775-11880794 | None:intergenic | 30.0% | |
| ATCAAGTTTATTCAATCCCA+TGG | + | chr8_2:11880781-11880800 | Msa1234550:CDS | 30.0% | |
| TTCCAGAATATTGAAGTCTA+GGG | - | chr8_2:11880926-11880945 | None:intergenic | 30.0% | |
| TTTCCAGAATATTGAAGTCT+AGG | - | chr8_2:11880927-11880946 | None:intergenic | 30.0% | |
| AGCCTTTGAGTAGTTTAAAA+TGG | + | chr8_2:11880950-11880969 | Msa1234550:CDS | 30.0% | |
| AAGTAAAGTTCCAAGTTCTT+CGG | - | chr8_2:11881025-11881044 | None:intergenic | 30.0% | |
| ! | CTTCTTAGTAGATCTTTTAG+GGG | + | chr8_2:11881071-11881090 | Msa1234550:CDS | 30.0% |
| ACTTATTATGCAACTTTGAG+AGG | + | chr8_2:11881115-11881134 | Msa1234550:CDS | 30.0% | |
| ! | ACTTTGAGAGGCTAAATATA+AGG | + | chr8_2:11881127-11881146 | Msa1234550:CDS | 30.0% |
| ! | AATTGGTCTACATTGATTAC+AGG | - | chr8_2:11881213-11881232 | None:intergenic | 30.0% |
| TTCCAATGCTAGTTACAAAT+TGG | - | chr8_2:11881230-11881249 | None:intergenic | 30.0% | |
| TCGAAAGTAAGTATAACACA+TGG | + | chr8_2:11881331-11881350 | Msa1234550:CDS | 30.0% | |
| CGAAAGTAAGTATAACACAT+GGG | + | chr8_2:11881332-11881351 | Msa1234550:CDS | 30.0% | |
| ! | TAAGTATAACACATGGGTTT+TGG | + | chr8_2:11881338-11881357 | Msa1234550:CDS | 30.0% |
| GGTGTTAGTAAATCTTCTAT+AGG | + | chr8_2:11881660-11881679 | Msa1234550:CDS | 30.0% | |
| ! | TCACAAGTCATAGCTTTTAA+TGG | + | chr8_2:11881800-11881819 | Msa1234550:exon | 30.0% |
| ! | AAGTCATAGCTTTTAATGGT+AGG | + | chr8_2:11881804-11881823 | Msa1234550:exon | 30.0% |
| TACACTACTAAGGTGTAAGT+GGG | - | chr8_2:11877598-11877617 | None:intergenic | 35.0% | |
| CAATGTACTCACTTCAAAAC+AGG | - | chr8_2:11877627-11877646 | None:intergenic | 35.0% | |
| ! | CAATGTTTCTGAATCAATGG+TGG | + | chr8_2:11877721-11877740 | Msa1234550:exon | 35.0% |
| !!! | ATTGGAAGGAAGTGCTTTTT+GGG | - | chr8_2:11877749-11877768 | None:intergenic | 35.0% |
| !!! | TATTGGAAGGAAGTGCTTTT+TGG | - | chr8_2:11877750-11877769 | None:intergenic | 35.0% |
| ATGAGGGTGATGAAGATTAT+TGG | - | chr8_2:11877767-11877786 | None:intergenic | 35.0% | |
| GTAGAAGATGAATGCAATGA+GGG | - | chr8_2:11877783-11877802 | None:intergenic | 35.0% | |
| TGTAGAAGATGAATGCAATG+AGG | - | chr8_2:11877784-11877803 | None:intergenic | 35.0% | |
| !! | TAGATTCGGTGATTGAAGAT+GGG | - | chr8_2:11877826-11877845 | None:intergenic | 35.0% |
| !! | TTAGATTCGGTGATTGAAGA+TGG | - | chr8_2:11877827-11877846 | None:intergenic | 35.0% |
| !! | GGGGATTTTAGTGTGAAATT+AGG | - | chr8_2:11877851-11877870 | None:intergenic | 35.0% |
| TGGGGGAAATTGTTGAATTA+GGG | - | chr8_2:11877886-11877905 | None:intergenic | 35.0% | |
| TTGGGGGAAATTGTTGAATT+AGG | - | chr8_2:11877887-11877906 | None:intergenic | 35.0% | |
| TAAAGGCGAGAACTTTGATA+AGG | - | chr8_2:11877919-11877938 | None:intergenic | 35.0% | |
| ! | AATCGAATCGAGGAGAATTT+TGG | + | chr8_2:11878069-11878088 | Msa1234550:CDS | 35.0% |
| !!! | ATTTTGTTGATGGGTTTGAG+TGG | + | chr8_2:11878092-11878111 | Msa1234550:CDS | 35.0% |
| ATGGGTTTGAGTGGAAATAT+GGG | + | chr8_2:11878101-11878120 | Msa1234550:CDS | 35.0% | |
| CATTATAGAACTGGGAATGT+GGG | + | chr8_2:11878136-11878155 | Msa1234550:CDS | 35.0% | |
| ATTATAGAACTGGGAATGTG+GGG | + | chr8_2:11878137-11878156 | Msa1234550:CDS | 35.0% | |
| !! | TGAGTTTGCTTTTGTTGTAG+AGG | + | chr8_2:11878204-11878223 | Msa1234550:CDS | 35.0% |
| AATGTAGCACCAAAAATGGA+AGG | - | chr8_2:11878313-11878332 | None:intergenic | 35.0% | |
| TTGCAATGTAGCACCAAAAA+TGG | - | chr8_2:11878317-11878336 | None:intergenic | 35.0% | |
| !! | AGTAGACTTGTTACAATGGT+TGG | + | chr8_2:11878393-11878412 | Msa1234550:intron | 35.0% |
| GCTCTATTTGAGAGTTTGTA+GGG | + | chr8_2:11878731-11878750 | Msa1234550:intron | 35.0% | |
| CTCTATTTGAGAGTTTGTAG+GGG | + | chr8_2:11878732-11878751 | Msa1234550:intron | 35.0% | |
| GTACACTCCAATAAAGAGAT+TGG | + | chr8_2:11878808-11878827 | Msa1234550:intron | 35.0% | |
| GTTAGCTATCAACAAACAAG+CGG | - | chr8_2:11878994-11879013 | None:intergenic | 35.0% | |
| !! | TGTTTGTTGATAGCTAACAG+AGG | + | chr8_2:11878996-11879015 | Msa1234550:intron | 35.0% |
| TTAAAACGTTTCACAAGGGT+TGG | + | chr8_2:11879286-11879305 | Msa1234550:intron | 35.0% | |
| !! | TGCATTGATGAGTCTTTTGT+AGG | + | chr8_2:11879347-11879366 | Msa1234550:intron | 35.0% |
| ! | TCTTTTGTAGGACAAGAACT+TGG | + | chr8_2:11879359-11879378 | Msa1234550:intron | 35.0% |
| TTCAATGGACAGTAGAATAC+AGG | + | chr8_2:11879401-11879420 | Msa1234550:intron | 35.0% | |
| TCAATGGACAGTAGAATACA+GGG | + | chr8_2:11879402-11879421 | Msa1234550:intron | 35.0% | |
| GTCTTAAAACTCGTGAATCT+AGG | - | chr8_2:11879576-11879595 | None:intergenic | 35.0% | |
| ! | TTATCATTTTAGGCATGTGC+AGG | - | chr8_2:11879634-11879653 | None:intergenic | 35.0% |
| TCCATAATACCATGGATGAA+TGG | + | chr8_2:11879780-11879799 | Msa1234550:intron | 35.0% | |
| ! | AGTTGATGTTTATTGCACCA+CGG | - | chr8_2:11879813-11879832 | None:intergenic | 35.0% |
| TTGCATATGGGTTCACATAA+AGG | - | chr8_2:11879875-11879894 | None:intergenic | 35.0% | |
| TTATGTGAACCCATATGCAA+AGG | + | chr8_2:11879875-11879894 | Msa1234550:intron | 35.0% | |
| CATTTACCTCCTTTGCATAT+GGG | - | chr8_2:11879887-11879906 | None:intergenic | 35.0% | |
| TCATTTACCTCCTTTGCATA+TGG | - | chr8_2:11879888-11879907 | None:intergenic | 35.0% | |
| !! | ACAGGTTTGTTCATGTTTTC+TGG | - | chr8_2:11879962-11879981 | None:intergenic | 35.0% |
| !! | TTTCAAGTTGCAAGAACAAC+AGG | - | chr8_2:11879980-11879999 | None:intergenic | 35.0% |
| AGTTTCAGCTCATTAGAGTT+GGG | - | chr8_2:11880041-11880060 | None:intergenic | 35.0% | |
| AAGTTTCAGCTCATTAGAGT+TGG | - | chr8_2:11880042-11880061 | None:intergenic | 35.0% | |
| !!! | TTGAACCCTTTTTTGTGCTA+TGG | + | chr8_2:11880261-11880280 | Msa1234550:intron | 35.0% |
| ! | ACCAAGTTTAACCCCATTTT+TGG | + | chr8_2:11880315-11880334 | Msa1234550:intron | 35.0% |
| ACCAAAAATGGGGTTAAACT+TGG | - | chr8_2:11880319-11880338 | None:intergenic | 35.0% | |
| !! | TATAATTGGTTTCTGGTTGC+AGG | + | chr8_2:11880428-11880447 | Msa1234550:intron | 35.0% |
| AAATTCTCTTTCCAAAGCCA+TGG | + | chr8_2:11880525-11880544 | Msa1234550:CDS | 35.0% | |
| GTTGTGGTATGACAAAAACA+AGG | + | chr8_2:11880559-11880578 | Msa1234550:CDS | 35.0% | |
| GTATGACAAAAACAAGGCAA+AGG | + | chr8_2:11880565-11880584 | Msa1234550:CDS | 35.0% | |
| GGCAATAAACCATTTCTTGA+GGG | + | chr8_2:11880587-11880606 | Msa1234550:CDS | 35.0% | |
| GCAATAAACCATTTCTTGAG+GGG | + | chr8_2:11880588-11880607 | Msa1234550:CDS | 35.0% | |
| !! | TACAGGTTGGTATAAGAAGA+TGG | + | chr8_2:11880732-11880751 | Msa1234550:CDS | 35.0% |
| !! | ACAGGTTGGTATAAGAAGAT+GGG | + | chr8_2:11880733-11880752 | Msa1234550:CDS | 35.0% |
| ATCCCTAGACTTCAATATTC+TGG | + | chr8_2:11880921-11880940 | Msa1234550:CDS | 35.0% | |
| AGATCAACTAAGGAATCAGA+TGG | - | chr8_2:11881174-11881193 | None:intergenic | 35.0% | |
| GACCAATTTGTAACTAGCAT+TGG | + | chr8_2:11881225-11881244 | Msa1234550:CDS | 35.0% | |
| TCGAGAATTGAGACTATCAA+TGG | + | chr8_2:11881273-11881292 | Msa1234550:CDS | 35.0% | |
| TGAGACTATCAATGGTATTG+TGG | + | chr8_2:11881281-11881300 | Msa1234550:CDS | 35.0% | |
| !!! | TATAACACATGGGTTTTGGA+TGG | + | chr8_2:11881342-11881361 | Msa1234550:CDS | 35.0% |
| !!! | ATAACACATGGGTTTTGGAT+GGG | + | chr8_2:11881343-11881362 | Msa1234550:CDS | 35.0% |
| !!! | AGAGTTGATGAGACTTCTTT+TGG | + | chr8_2:11881618-11881637 | Msa1234550:CDS | 35.0% |
| ! | ACTTCTTTTGGCATGAAGAT+TGG | + | chr8_2:11881630-11881649 | Msa1234550:CDS | 35.0% |
| TTCTATAGGGGATAGAAAGT+TGG | + | chr8_2:11881674-11881693 | Msa1234550:CDS | 35.0% | |
| !! | GGGATAGAAAGTTGGTATAT+TGG | + | chr8_2:11881682-11881701 | Msa1234550:CDS | 35.0% |
| ! | CAAATTAAGTTGCCAATGTG+AGG | + | chr8_2:11881941-11881960 | Msa1234550:three_prime_UTR | 35.0% |
| CTACACTACTAAGGTGTAAG+TGG | - | chr8_2:11877599-11877618 | None:intergenic | 40.0% | |
| GAAACATTGCTTGCAGGTTA+GGG | - | chr8_2:11877710-11877729 | None:intergenic | 40.0% | |
| AGAAACATTGCTTGCAGGTT+AGG | - | chr8_2:11877711-11877730 | None:intergenic | 40.0% | |
| GATTCAGAAACATTGCTTGC+AGG | - | chr8_2:11877716-11877735 | None:intergenic | 40.0% | |
| GGGTGATGAAGATTATTGGA+AGG | - | chr8_2:11877763-11877782 | None:intergenic | 40.0% | |
| GATCAATGTAAACATGGAGG+TGG | - | chr8_2:11878009-11878028 | None:intergenic | 40.0% | |
| GACATCGGAATTGTTCAAAG+GGG | - | chr8_2:11878038-11878057 | None:intergenic | 40.0% | |
| CGACATCGGAATTGTTCAAA+GGG | - | chr8_2:11878039-11878058 | None:intergenic | 40.0% | |
| TCGACATCGGAATTGTTCAA+AGG | - | chr8_2:11878040-11878059 | None:intergenic | 40.0% | |
| ! | GATGGGTTTGAGTGGAAATA+TGG | + | chr8_2:11878100-11878119 | Msa1234550:CDS | 40.0% |
| TGGGTTTGAGTGGAAATATG+GGG | + | chr8_2:11878102-11878121 | Msa1234550:CDS | 40.0% | |
| TGAGTGGAAATATGGGGAAA+AGG | + | chr8_2:11878108-11878127 | Msa1234550:CDS | 40.0% | |
| AAGGTGGTGCATTATAGAAC+TGG | + | chr8_2:11878127-11878146 | Msa1234550:CDS | 40.0% | |
| AGGTGGTGCATTATAGAACT+GGG | + | chr8_2:11878128-11878147 | Msa1234550:CDS | 40.0% | |
| GCATTATAGAACTGGGAATG+TGG | + | chr8_2:11878135-11878154 | Msa1234550:CDS | 40.0% | |
| ! | TGTTGTAGAGGATGATTTGG+AGG | + | chr8_2:11878216-11878235 | Msa1234550:CDS | 40.0% |
| TGTGATTGAGACTGCATCAT+CGG | - | chr8_2:11878512-11878531 | None:intergenic | 40.0% | |
| GGACCCTTATAAAAAAGCCT+TGG | + | chr8_2:11878597-11878616 | Msa1234550:intron | 40.0% | |
| TAGATAGGGATGTCTACAAC+AGG | + | chr8_2:11878666-11878685 | Msa1234550:intron | 40.0% | |
| AGAGCCTAAAATTCCTGACA+CGG | - | chr8_2:11878716-11878735 | None:intergenic | 40.0% | |
| GGCTCTATTTGAGAGTTTGT+AGG | + | chr8_2:11878730-11878749 | Msa1234550:intron | 40.0% | |
| TATTTGAGAGTTTGTAGGGG+AGG | + | chr8_2:11878735-11878754 | Msa1234550:intron | 40.0% | |
| ATTTGAGAGTTTGTAGGGGA+GGG | + | chr8_2:11878736-11878755 | Msa1234550:intron | 40.0% | |
| GGTTTGACGTTGGATGAATT+TGG | + | chr8_2:11879017-11879036 | Msa1234550:intron | 40.0% | |
| TTTGGTCAGTGAGTACTTCA+TGG | + | chr8_2:11879035-11879054 | Msa1234550:intron | 40.0% | |
| AGTGAGTACTTCATGGATGA+GGG | + | chr8_2:11879042-11879061 | Msa1234550:intron | 40.0% | |
| ! | TGCTAATGATATCTGGGGTA+AGG | + | chr8_2:11879245-11879264 | Msa1234550:intron | 40.0% |
| ATGAGAAGCCAGTGTTTCAA+TGG | + | chr8_2:11879386-11879405 | Msa1234550:intron | 40.0% | |
| TCTACTGTCCATTGAAACAC+TGG | - | chr8_2:11879397-11879416 | None:intergenic | 40.0% | |
| GTCCTACAAGTCTACAATCT+AGG | + | chr8_2:11879480-11879499 | Msa1234550:intron | 40.0% | |
| TGCCTAGATTGTAGACTTGT+AGG | - | chr8_2:11879485-11879504 | None:intergenic | 40.0% | |
| GAGTCTATGTGAGTTTAGCT+AGG | - | chr8_2:11879546-11879565 | None:intergenic | 40.0% | |
| TACCTTGTACAAGACGAACA+AGG | + | chr8_2:11879699-11879718 | Msa1234550:intron | 40.0% | |
| GCCATTCATCCATGGTATTA+TGG | - | chr8_2:11879784-11879803 | None:intergenic | 40.0% | |
| AATACCATGGATGAATGGCA+AGG | + | chr8_2:11879785-11879804 | Msa1234550:intron | 40.0% | |
| ! | AAAGGCGTAAGATGCATCTA+TGG | - | chr8_2:11879857-11879876 | None:intergenic | 40.0% |
| !! | TTCGTGACTTGGTTTGTCTT+AGG | - | chr8_2:11879939-11879958 | None:intergenic | 40.0% |
| !!! | ATGTTTTCTGGTTCGTGACT+TGG | - | chr8_2:11879950-11879969 | None:intergenic | 40.0% |
| !! | AGAGTAAAGGATGGTGGAAT+AGG | - | chr8_2:11880103-11880122 | None:intergenic | 40.0% |
| CCTGACCATAGCACAAAAAA+GGG | - | chr8_2:11880269-11880288 | None:intergenic | 40.0% | |
| ACCTGACCATAGCACAAAAA+AGG | - | chr8_2:11880270-11880289 | None:intergenic | 40.0% | |
| !! | TTTCTGGTTGCAGGTAAACA+TGG | + | chr8_2:11880437-11880456 | Msa1234550:intron | 40.0% |
| ! | CTTTTCTTGTACCAGTTGGT+TGG | + | chr8_2:11880491-11880510 | Msa1234550:CDS | 40.0% |
| GGGCAATAAACCATTTCTTG+AGG | + | chr8_2:11880586-11880605 | Msa1234550:CDS | 40.0% | |
| TAAACCATTTCTTGAGGGGA+TGG | + | chr8_2:11880592-11880611 | Msa1234550:CDS | 40.0% | |
| ATTACCATCCCCTCAAGAAA+TGG | - | chr8_2:11880599-11880618 | None:intergenic | 40.0% | |
| ! | TTTTACAGGTGACTACAGGT+TGG | + | chr8_2:11880719-11880738 | Msa1234550:intron | 40.0% |
| !! | CAGGTTGGTATAAGAAGATG+GGG | + | chr8_2:11880734-11880753 | Msa1234550:CDS | 40.0% |
| !! | AGGTTGGTATAAGAAGATGG+GGG | + | chr8_2:11880735-11880754 | Msa1234550:CDS | 40.0% |
| TGCTCTCTCGTGCAAAAAAT+TGG | - | chr8_2:11880824-11880843 | None:intergenic | 40.0% | |
| AGAGATGCTGGAGTAAACTA+CGG | + | chr8_2:11880859-11880878 | Msa1234550:CDS | 40.0% | |
| ACCTGATTCTCAGTTACTAG+AGG | + | chr8_2:11880894-11880913 | Msa1234550:CDS | 40.0% | |
| TCCTCTAGTAACTGAGAATC+AGG | - | chr8_2:11880898-11880917 | None:intergenic | 40.0% | |
| ! | TTGTTTCAGAGAAGTACGTC+CGG | + | chr8_2:11880981-11881000 | Msa1234550:CDS | 40.0% |
| CAACTAAGGAATCAGATGGA+GGG | - | chr8_2:11881170-11881189 | None:intergenic | 40.0% | |
| TCAACTAAGGAATCAGATGG+AGG | - | chr8_2:11881171-11881190 | None:intergenic | 40.0% | |
| ATTCCTTAGTTGATCTGTCC+AGG | + | chr8_2:11881178-11881197 | Msa1234550:CDS | 40.0% | |
| TATCAATGGTATTGTGGCCA+AGG | + | chr8_2:11881287-11881306 | Msa1234550:CDS | 40.0% | |
| CTTCTGTGTTGCAAAAAACG+TGG | + | chr8_2:11881419-11881438 | Msa1234550:CDS | 40.0% | |
| CATCGTCTAGTGAGAAAATC+TGG | + | chr8_2:11881463-11881482 | Msa1234550:CDS | 40.0% | |
| AGTGAGAAAATCTGGACCAA+TGG | + | chr8_2:11881471-11881490 | Msa1234550:CDS | 40.0% | |
| ! | AATTTTCGACACGAAGCCAT+TGG | - | chr8_2:11881490-11881509 | None:intergenic | 40.0% |
| AGAAAAGACTCATCAACCCA+AGG | + | chr8_2:11881534-11881553 | Msa1234550:CDS | 40.0% | |
| CACAAAACTTAGGCTACCTT+GGG | - | chr8_2:11881553-11881572 | None:intergenic | 40.0% | |
| ACACAAAACTTAGGCTACCT+TGG | - | chr8_2:11881554-11881573 | None:intergenic | 40.0% | |
| GGTATATTGGTCAACTGAGA+TGG | + | chr8_2:11881695-11881714 | Msa1234550:CDS | 40.0% | |
| ! | AGCTGGAATCGATTCAGAAA+CGG | + | chr8_2:11881718-11881737 | Msa1234550:CDS | 40.0% |
| GGCTCAAAGAGTTGAATTTG+TGG | + | chr8_2:11881739-11881758 | Msa1234550:CDS | 40.0% | |
| GTCTATCTTAAGCCTCACAT+TGG | - | chr8_2:11881956-11881975 | None:intergenic | 40.0% | |
| ATGTGAGGCTTAAGATAGAC+TGG | + | chr8_2:11881956-11881975 | Msa1234550:three_prime_UTR | 40.0% | |
| !! | GCGAGTTGAATTTTGTGTTC+AGG | + | chr8_2:11881988-11882007 | Msa1234550:three_prime_UTR | 40.0% |
| CAGGACAAGCTACACTACTA+AGG | - | chr8_2:11877608-11877627 | None:intergenic | 45.0% | |
| GTGGAAATATGGGGAAAAGG+TGG | + | chr8_2:11878111-11878130 | Msa1234550:CDS | 45.0% | |
| GCAAACTCATCATCTGAACC+AGG | - | chr8_2:11878193-11878212 | None:intergenic | 45.0% | |
| GGATGTCTACAACAGGAGTT+TGG | + | chr8_2:11878673-11878692 | Msa1234550:intron | 45.0% | |
| !! | TTTGTTGATTCCTCCGTGTC+AGG | + | chr8_2:11878700-11878719 | Msa1234550:intron | 45.0% |
| ! | TCCTCCGTGTCAGGAATTTT+AGG | + | chr8_2:11878709-11878728 | Msa1234550:intron | 45.0% |
| TTTGAGAGTTTGTAGGGGAG+GGG | + | chr8_2:11878737-11878756 | Msa1234550:intron | 45.0% | |
| AGCTAACAGAGGTTTGACGT+TGG | + | chr8_2:11879007-11879026 | Msa1234550:intron | 45.0% | |
| CAGTGAGTACTTCATGGATG+AGG | + | chr8_2:11879041-11879060 | Msa1234550:intron | 45.0% | |
| CATGTTGGCCATTGTTTGTC+TGG | + | chr8_2:11879170-11879189 | Msa1234550:intron | 45.0% | |
| ! | TGCCTTGTTCGTCTTGTACA+AGG | - | chr8_2:11879704-11879723 | None:intergenic | 45.0% |
| TGTGAACCCATATGCAAAGG+AGG | + | chr8_2:11879878-11879897 | Msa1234550:intron | 45.0% | |
| AGCTGAATCCAGCTCCAATA+AGG | + | chr8_2:11880072-11880091 | Msa1234550:intron | 45.0% | |
| GCTGAATCCAGCTCCAATAA+GGG | + | chr8_2:11880073-11880092 | Msa1234550:intron | 45.0% | |
| CTGAATCCAGCTCCAATAAG+GGG | + | chr8_2:11880074-11880093 | Msa1234550:intron | 45.0% | |
| TGGAATAGGTCTCCCCTTAT+TGG | - | chr8_2:11880089-11880108 | None:intergenic | 45.0% | |
| !!! | CCCTTTTTTGTGCTATGGTC+AGG | + | chr8_2:11880266-11880285 | Msa1234550:intron | 45.0% |
| ! | TTTTGTGCTATGGTCAGGTC+TGG | + | chr8_2:11880271-11880290 | Msa1234550:intron | 45.0% |
| TGGTCGAATAGCGACAAAAG+TGG | + | chr8_2:11880291-11880310 | Msa1234550:intron | 45.0% | |
| ACATGGCAACAAGTTGCAGT+TGG | + | chr8_2:11880454-11880473 | Msa1234550:CDS | 45.0% | |
| ! | ACGGCTTTTCTTGTACCAGT+TGG | + | chr8_2:11880487-11880506 | Msa1234550:CDS | 45.0% |
| CTGAACTCTTTCCATGGCTT+TGG | - | chr8_2:11880539-11880558 | None:intergenic | 45.0% | |
| CAAAGCCATGGAAAGAGTTC+AGG | + | chr8_2:11880537-11880556 | Msa1234550:CDS | 45.0% | |
| CACAACCTGAACTCTTTCCA+TGG | - | chr8_2:11880545-11880564 | None:intergenic | 45.0% | |
| !! | CATGGAAAGAGTTCAGGTTG+TGG | + | chr8_2:11880543-11880562 | Msa1234550:CDS | 45.0% |
| AGAAGATGGGGGAGAGAATA+TGG | + | chr8_2:11880746-11880765 | Msa1234550:CDS | 45.0% | |
| GAGATGCTGGAGTAAACTAC+GGG | + | chr8_2:11880860-11880879 | Msa1234550:CDS | 45.0% | |
| GTAAACTACGGGAAAACTGC+TGG | + | chr8_2:11880871-11880890 | Msa1234550:CDS | 45.0% | |
| ! | TGTTTCAGAGAAGTACGTCC+GGG | + | chr8_2:11880982-11881001 | Msa1234550:CDS | 45.0% |
| CTTAGTTGATCTGTCCAGGA+GGG | + | chr8_2:11881182-11881201 | Msa1234550:CDS | 45.0% | |
| TTAGTTGATCTGTCCAGGAG+GGG | + | chr8_2:11881183-11881202 | Msa1234550:CDS | 45.0% | |
| TCTAGACTCGAGCAATACGT+CGG | - | chr8_2:11881385-11881404 | None:intergenic | 45.0% | |
| GCAACACAGAAGTCGTAGTT+GGG | - | chr8_2:11881411-11881430 | None:intergenic | 45.0% | |
| TGCAACACAGAAGTCGTAGT+TGG | - | chr8_2:11881412-11881431 | None:intergenic | 45.0% | |
| CGTGTCGAAAATTGTAGCCA+TGG | + | chr8_2:11881497-11881516 | Msa1234550:CDS | 45.0% | |
| ! | GTCTTTTCTCCCCAAAGAGT+CGG | - | chr8_2:11881523-11881542 | None:intergenic | 45.0% |
| ! | GGCATGAAGATTGGTTCAGA+TGG | + | chr8_2:11881639-11881658 | Msa1234550:CDS | 45.0% |
| !!! | ATTTTTAAATATAAGATTAT+TGG | + | chr8_2:11878858-11878877 | Msa1234550:intron | 5.0% |
| !!! | TTATTTTTTTCTTTAAAATA+TGG | + | chr8_2:11878968-11878987 | Msa1234550:intron | 5.0% |
| !!! | AAAAAAAATATTATCATTTT+AGG | - | chr8_2:11879644-11879663 | None:intergenic | 5.0% |
| !!! | ATATTTTTTTTTTTTTGAAA+CGG | + | chr8_2:11879653-11879672 | Msa1234550:intron | 5.0% |
| AACGGAGTCAAGGCGGTTAA+AGG | - | chr8_2:11877936-11877955 | None:intergenic | 50.0% | |
| GTGCTACATTGCAACGTGCA+AGG | + | chr8_2:11878323-11878342 | Msa1234550:CDS | 50.0% | |
| ! | CAACGTGCAAGGTTTGTTCC+AGG | + | chr8_2:11878334-11878353 | Msa1234550:CDS | 50.0% |
| GTCCATAGCTGTGATCTCGA+CGG | - | chr8_2:11878581-11878600 | None:intergenic | 50.0% | |
| GCCTAAAATTCCTGACACGG+AGG | - | chr8_2:11878713-11878732 | None:intergenic | 50.0% | |
| GGTTTGATCCTCCGTTGTAG+TGG | + | chr8_2:11879307-11879326 | Msa1234550:intron | 50.0% | |
| GGTTTGTCTTAGGAGCCACA+GGG | - | chr8_2:11879929-11879948 | None:intergenic | 50.0% | |
| ! | TGGTTTGTCTTAGGAGCCAC+AGG | - | chr8_2:11879930-11879949 | None:intergenic | 50.0% |
| TGCAGTTGGATGACCAGACA+CGG | + | chr8_2:11880468-11880487 | Msa1234550:CDS | 50.0% | |
| GGTACAAGAAAAGCCGTGTC+TGG | - | chr8_2:11880484-11880503 | None:intergenic | 50.0% | |
| ! | TGTACCAGTTGGTTGGTACG+TGG | + | chr8_2:11880498-11880517 | Msa1234550:CDS | 50.0% |
| ! | GTACCAGTTGGTTGGTACGT+GGG | + | chr8_2:11880499-11880518 | Msa1234550:CDS | 50.0% |
| ! | TACCAGTTGGTTGGTACGTG+GGG | + | chr8_2:11880500-11880519 | Msa1234550:CDS | 50.0% |
| GGGAGAGAATATGGACACCT+TGG | + | chr8_2:11880755-11880774 | Msa1234550:CDS | 50.0% | |
| AGTGTCTCTCACAGAGATGC+TGG | + | chr8_2:11880847-11880866 | Msa1234550:CDS | 50.0% | |
| GAGTTCCTCACAAACCTTCC+CGG | - | chr8_2:11881003-11881022 | None:intergenic | 50.0% | |
| GTGAGGAACTCCGAAGAACT+TGG | + | chr8_2:11881012-11881031 | Msa1234550:CDS | 50.0% | |
| CCTCCTGGACAGATCAACTA+AGG | - | chr8_2:11881184-11881203 | None:intergenic | 50.0% | |
| CCTTAGTTGATCTGTCCAGG+AGG | + | chr8_2:11881181-11881200 | Msa1234550:CDS | 50.0% | |
| TCGAGCAATACGTCGGAAGT+GGG | - | chr8_2:11881378-11881397 | None:intergenic | 50.0% | |
| TTGGTCAACTGAGATGGAGC+TGG | + | chr8_2:11881701-11881720 | Msa1234550:CDS | 50.0% | |
| TGAGTTATCCTGCACTGCTG+TGG | + | chr8_2:11881773-11881792 | Msa1234550:CDS | 50.0% | |
| AACGGGAAACGGAGTCAAGG+CGG | - | chr8_2:11877943-11877962 | None:intergenic | 55.0% | |
| AATCTGCGGTAGCGAGGGAA+CGG | - | chr8_2:11877970-11877989 | None:intergenic | 55.0% | |
| GAGGTAATCTGCGGTAGCGA+GGG | - | chr8_2:11877975-11877994 | None:intergenic | 55.0% | |
| CTCGCTACCGCAGATTACCT+CGG | + | chr8_2:11877974-11877993 | Msa1234550:CDS | 55.0% | |
| AACTGGGAATGTGGGGTTGC+AGG | + | chr8_2:11878144-11878163 | Msa1234550:CDS | 55.0% | |
| TGCCGTCGAGATCACAGCTA+TGG | + | chr8_2:11878576-11878595 | Msa1234550:intron | 55.0% | |
| TTTGTAGGGGAGGGGTGGAA+AGG | + | chr8_2:11878745-11878764 | Msa1234550:intron | 55.0% | |
| TTGTAGGGGAGGGGTGGAAA+GGG | + | chr8_2:11878746-11878765 | Msa1234550:intron | 55.0% | |
| ATCCTCCGTTGTAGTGGCAG+TGG | + | chr8_2:11879313-11879332 | Msa1234550:intron | 55.0% | |
| ACCTGCCACTGCCACTACAA+CGG | - | chr8_2:11879321-11879340 | None:intergenic | 55.0% | |
| GGAGCCTTGCCATTCATCCA+TGG | - | chr8_2:11879792-11879811 | None:intergenic | 55.0% | |
| CGTACTGAGTCTCAACCCTG+TGG | + | chr8_2:11879911-11879930 | Msa1234550:intron | 55.0% | |
| AGGTCTCCCCTTATTGGAGC+TGG | - | chr8_2:11880083-11880102 | None:intergenic | 55.0% | |
| ! | ACCAGTTGGTTGGTACGTGG+GGG | + | chr8_2:11880501-11880520 | Msa1234550:CDS | 55.0% |
| ! | TCAGAGAAGTACGTCCGGGA+AGG | + | chr8_2:11880986-11881005 | Msa1234550:CDS | 55.0% |
| TACGTCCGGGAAGGTTTGTG+AGG | + | chr8_2:11880995-11881014 | Msa1234550:CDS | 55.0% | |
| GATTACAGGATGTCCCCTCC+TGG | - | chr8_2:11881199-11881218 | None:intergenic | 55.0% | |
| CTCGAGCAATACGTCGGAAG+TGG | - | chr8_2:11881379-11881398 | None:intergenic | 55.0% | |
| ! | TGTAGCCATGGCCGACTCTT+TGG | + | chr8_2:11881509-11881528 | Msa1234550:CDS | 55.0% |
| ! | GTAGCCATGGCCGACTCTTT+GGG | + | chr8_2:11881510-11881529 | Msa1234550:CDS | 55.0% |
| ! | TAGCCATGGCCGACTCTTTG+GGG | + | chr8_2:11881511-11881530 | Msa1234550:CDS | 55.0% |
| GTGACAAACCACAGCAGTGC+AGG | - | chr8_2:11881784-11881803 | None:intergenic | 55.0% | |
| GGCAACGGGAAACGGAGTCA+AGG | - | chr8_2:11877946-11877965 | None:intergenic | 60.0% | |
| GGAACGGAGGCAACGGGAAA+CGG | - | chr8_2:11877954-11877973 | None:intergenic | 60.0% | |
| TAGCGAGGGAACGGAGGCAA+CGG | - | chr8_2:11877961-11877980 | None:intergenic | 60.0% | |
| CGAGGTAATCTGCGGTAGCG+AGG | - | chr8_2:11877976-11877995 | None:intergenic | 60.0% | |
| GCGATCGCCGAGGTAATCTG+CGG | - | chr8_2:11877984-11878003 | None:intergenic | 60.0% | |
| ATGTGGGGTTGCAGGCACAG+TGG | + | chr8_2:11878152-11878171 | Msa1234550:CDS | 60.0% | |
| GTTGCAGGCACAGTGGTTGG+AGG | + | chr8_2:11878159-11878178 | Msa1234550:CDS | 60.0% | |
| AGGCACAGTGGTTGGAGGCA+TGG | + | chr8_2:11878164-11878183 | Msa1234550:CDS | 60.0% | |
| ! | CACAGTGGTTGGAGGCATGG+TGG | + | chr8_2:11878167-11878186 | Msa1234550:CDS | 60.0% |
| GAGAGTTTGTAGGGGAGGGG+TGG | + | chr8_2:11878740-11878759 | Msa1234550:intron | 60.0% | |
| ! | AGGGGTGGAAAGGGCTTTGG+CGG | + | chr8_2:11878755-11878774 | Msa1234550:intron | 60.0% |
| ! | GTGGAAAGGGCTTTGGCGGA+AGG | + | chr8_2:11878759-11878778 | Msa1234550:intron | 60.0% |
| CTTTGGCGGAAGGCGAAGAG+AGG | + | chr8_2:11878769-11878788 | Msa1234550:intron | 60.0% | |
| TGCCACTGCCACTACAACGG+AGG | - | chr8_2:11879318-11879337 | None:intergenic | 60.0% | |
| TCCGTTGTAGTGGCAGTGGC+AGG | + | chr8_2:11879317-11879336 | Msa1234550:intron | 60.0% | |
| GTTGTAGTGGCAGTGGCAGG+TGG | + | chr8_2:11879320-11879339 | Msa1234550:intron | 60.0% | |
| GGATGAATGGCAAGGCTCCG+TGG | + | chr8_2:11879793-11879812 | Msa1234550:intron | 60.0% | |
| TCTCCCCAAAGAGTCGGCCA+TGG | - | chr8_2:11881517-11881536 | None:intergenic | 60.0% | |
| AGCGAGGGAACGGAGGCAAC+GGG | - | chr8_2:11877960-11877979 | None:intergenic | 65.0% | |
| GGGGTTGCAGGCACAGTGGT+TGG | + | chr8_2:11878156-11878175 | Msa1234550:CDS | 65.0% | |
| ! | TGGTTGGAGGCATGGTGGCC+TGG | + | chr8_2:11878172-11878191 | Msa1234550:CDS | 65.0% |
| GGGAGGGGTGGAAAGGGCTT+TGG | + | chr8_2:11878752-11878771 | Msa1234550:intron | 65.0% | |
| GCCCCCACGTACCAACCAAC+TGG | - | chr8_2:11880505-11880524 | None:intergenic | 65.0% | |
| CTGCGGTAGCGAGGGAACGG+AGG | - | chr8_2:11877967-11877986 | None:intergenic | 70.0% | |
| GGAGGTGGACGCGATCGCCG+AGG | - | chr8_2:11877994-11878013 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 11877583 | 11882041 | 11877583 | ID=Msa1234550;Name=Msa1234550 |
| chr8_2 | mRNA | 11877583 | 11882041 | 11877583 | ID=Msa1234550-mRNA-1;Parent=Msa1234550;Name=Msa1234550-mRNA-1;_AED=0.03;_eAED=0.03;_QI=154|1|1|1|1|1|3|229|622 |
| chr8_2 | exon | 11877583 | 11878355 | 11877583 | ID=Msa1234550-mRNA-1:exon:4645;Parent=Msa1234550-mRNA-1 |
| chr8_2 | exon | 11880450 | 11880613 | 11880450 | ID=Msa1234550-mRNA-1:exon:4646;Parent=Msa1234550-mRNA-1 |
| chr8_2 | exon | 11880727 | 11882041 | 11880727 | ID=Msa1234550-mRNA-1:exon:4647;Parent=Msa1234550-mRNA-1 |
| chr8_2 | five_prime_UTR | 11877583 | 11877736 | 11877583 | ID=Msa1234550-mRNA-1:five_prime_utr;Parent=Msa1234550-mRNA-1 |
| chr8_2 | CDS | 11877737 | 11878355 | 11877737 | ID=Msa1234550-mRNA-1:cds;Parent=Msa1234550-mRNA-1 |
| chr8_2 | CDS | 11880450 | 11880613 | 11880450 | ID=Msa1234550-mRNA-1:cds;Parent=Msa1234550-mRNA-1 |
| chr8_2 | CDS | 11880727 | 11881812 | 11880727 | ID=Msa1234550-mRNA-1:cds;Parent=Msa1234550-mRNA-1 |
| chr8_2 | three_prime_UTR | 11881813 | 11882041 | 11881813 | ID=Msa1234550-mRNA-1:three_prime_utr;Parent=Msa1234550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
