Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626630 | XP_003604299.2 | 87.778 | 450 | 22 | 5 | 1 | 444 | 1 | 423 | 0.0 | 729 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626630 | sp|B7IFB5|RS15_THEAB | 54.667 | 75 | 32 | 1 | 353 | 425 | 9 | 83 | 3.66e-18 | 82.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001940 | Msa0626630 | 0.811906 | 5.537507e-51 | -8.615850e-47 |
| Msa0003720 | Msa0626630 | 0.871002 | 9.522859e-67 | -8.615850e-47 |
| Msa0017950 | Msa0626630 | 0.802343 | 5.869769e-49 | -8.615850e-47 |
| Msa0021220 | Msa0626630 | 0.800628 | 1.318434e-48 | -8.615850e-47 |
| Msa0025720 | Msa0626630 | 0.806369 | 8.507812e-50 | -8.615850e-47 |
| Msa0030200 | Msa0626630 | 0.810293 | 1.238706e-50 | -8.615850e-47 |
| Msa0032920 | Msa0626630 | -0.819287 | 1.257118e-52 | -8.615850e-47 |
| Msa0032960 | Msa0626630 | -0.801634 | 8.207279e-49 | -8.615850e-47 |
| Msa0033110 | Msa0626630 | 0.808913 | 2.452067e-50 | -8.615850e-47 |
| Msa0033260 | Msa0626630 | 0.803683 | 3.100493e-49 | -8.615850e-47 |
| Msa0037770 | Msa0626630 | 0.825420 | 4.733691e-54 | -8.615850e-47 |
| Msa0047160 | Msa0626630 | 0.814574 | 1.437147e-51 | -8.615850e-47 |
| Msa0059040 | Msa0626630 | 0.835798 | 1.360212e-56 | -8.615850e-47 |
| Msa0059110 | Msa0626630 | 0.848093 | 7.633259e-60 | -8.615850e-47 |
| Msa0070700 | Msa0626630 | 0.821413 | 4.091343e-53 | -8.615850e-47 |
| Msa0072420 | Msa0626630 | 0.817356 | 3.440669e-52 | -8.615850e-47 |
| Msa0090520 | Msa0626630 | 0.815654 | 8.274235e-52 | -8.615850e-47 |
| Msa0091410 | Msa0626630 | 0.802081 | 6.643201e-49 | -8.615850e-47 |
| Msa0091560 | Msa0626630 | 0.802158 | 6.407728e-49 | -8.615850e-47 |
| Msa0093850 | Msa0626630 | 0.816260 | 6.059954e-52 | -8.615850e-47 |
| Msa0094470 | Msa0626630 | 0.816136 | 6.460436e-52 | -8.615850e-47 |
| Msa0101270 | Msa0626630 | 0.822650 | 2.115087e-53 | -8.615850e-47 |
| Msa0105370 | Msa0626630 | 0.856862 | 2.414762e-62 | -8.615850e-47 |
| Msa0106620 | Msa0626630 | 0.821340 | 4.253988e-53 | -8.615850e-47 |
| Msa0106710 | Msa0626630 | 0.817281 | 3.578074e-52 | -8.615850e-47 |
| Msa0115130 | Msa0626630 | 0.819622 | 1.054154e-52 | -8.615850e-47 |
| Msa0115400 | Msa0626630 | 0.839257 | 1.765809e-57 | -8.615850e-47 |
| Msa0118590 | Msa0626630 | 0.827939 | 1.185958e-54 | -8.615850e-47 |
| Msa0119900 | Msa0626630 | 0.807775 | 4.286008e-50 | -8.615850e-47 |
| Msa0604530 | Msa0626630 | 0.814720 | 1.334190e-51 | -8.615850e-47 |
| Msa0608500 | Msa0626630 | 0.826034 | 3.385395e-54 | -8.615850e-47 |
| Msa0619420 | Msa0626630 | 0.803140 | 4.017541e-49 | -8.615850e-47 |
| Msa0625720 | Msa0626630 | 0.831599 | 1.523370e-55 | -8.615850e-47 |
| Msa0626630 | Msa0628410 | 0.806157 | 9.427384e-50 | -8.615850e-47 |
| Msa0626630 | Msa0628420 | 0.814633 | 1.394825e-51 | -8.615850e-47 |
| Msa0626630 | Msa0634890 | 0.805193 | 1.501987e-49 | -8.615850e-47 |
| Msa0626630 | Msa0645620 | 0.802440 | 5.603909e-49 | -8.615850e-47 |
| Msa0626630 | Msa0648780 | 0.808966 | 2.388223e-50 | -8.615850e-47 |
| Msa0626630 | Msa0649020 | 0.820450 | 6.816635e-53 | -8.615850e-47 |
| Msa0626630 | Msa0649050 | 0.826365 | 2.824376e-54 | -8.615850e-47 |
| Msa0626630 | Msa0658590 | 0.847809 | 9.143696e-60 | -8.615850e-47 |
| Msa0626630 | Msa0660040 | 0.802099 | 6.588745e-49 | -8.615850e-47 |
| Msa0626630 | Msa0663390 | 0.829836 | 4.118857e-55 | -8.615850e-47 |
| Msa0626630 | Msa0664750 | 0.988676 | 5.801358e-175 | -8.615850e-47 |
| Msa0626630 | Msa0669520 | 0.813059 | 3.100432e-51 | -8.615850e-47 |
| Msa0626630 | Msa0685200 | 0.810372 | 1.190864e-50 | -8.615850e-47 |
| Msa0626630 | Msa0689260 | 0.838921 | 2.157149e-57 | -8.615850e-47 |
| Msa0626630 | Msa0691290 | 0.813211 | 2.870675e-51 | -8.615850e-47 |
| Msa0626630 | Msa0691530 | 0.822676 | 2.084940e-53 | -8.615850e-47 |
| Msa0626630 | Msa0698800 | 0.843696 | 1.195110e-58 | -8.615850e-47 |
| Msa0626630 | Msa0703550 | 0.803385 | 3.576040e-49 | -8.615850e-47 |
| Msa0626630 | Msa0707250 | 0.826309 | 2.912367e-54 | -8.615850e-47 |
| Msa0626630 | Msa0711780 | 0.815503 | 8.939843e-52 | -8.615850e-47 |
| Msa0626630 | Msa0752700 | 0.813631 | 2.321710e-51 | -8.615850e-47 |
| Msa0626630 | Msa0757830 | 0.810627 | 1.049107e-50 | -8.615850e-47 |
| Msa0626630 | Msa0790400 | 0.840398 | 8.908030e-58 | -8.615850e-47 |
| Msa0626630 | Msa0794670 | 0.806676 | 7.329287e-50 | -8.615850e-47 |
| Msa0626630 | Msa0794970 | 0.810770 | 9.769408e-51 | -8.615850e-47 |
| Msa0626630 | Msa0830540 | 0.802376 | 5.777288e-49 | -8.615850e-47 |
| Msa0626630 | Msa0831100 | 0.814395 | 1.574647e-51 | -8.615850e-47 |
| Msa0626630 | Msa0832120 | 0.825016 | 5.896827e-54 | -8.615850e-47 |
| Msa0626630 | Msa0881290 | 0.824546 | 7.611412e-54 | -8.615850e-47 |
| Msa0626630 | Msa0892640 | 0.800989 | 1.112287e-48 | -8.615850e-47 |
| Msa0626630 | Msa0894400 | 0.822957 | 1.793859e-53 | -8.615850e-47 |
| Msa0626630 | Msa0902760 | 0.802659 | 5.050158e-49 | -8.615850e-47 |
| Msa0626630 | Msa0921000 | 0.820684 | 6.023952e-53 | -8.615850e-47 |
| Msa0626630 | Msa0933760 | 0.806463 | 8.125376e-50 | -8.615850e-47 |
| Msa0626630 | Msa0934140 | 0.844532 | 7.134516e-59 | -8.615850e-47 |
| Msa0626630 | Msa0944680 | 0.804055 | 2.595621e-49 | -8.615850e-47 |
| Msa0626630 | Msa0945440 | 0.803823 | 2.900053e-49 | -8.615850e-47 |
| Msa0626630 | Msa0958000 | 0.821425 | 4.064725e-53 | -8.615850e-47 |
| Msa0626630 | Msa0989540 | 0.820491 | 6.669653e-53 | -8.615850e-47 |
| Msa0626630 | Msa0997430 | 0.800654 | 1.302006e-48 | -8.615850e-47 |
| Msa0626630 | Msa1006840 | 0.829215 | 5.830579e-55 | -8.615850e-47 |
| Msa0626630 | Msa1012740 | 0.833195 | 6.130978e-56 | -8.615850e-47 |
| Msa0626630 | Msa1029070 | 0.817772 | 2.773102e-52 | -8.615850e-47 |
| Msa0626630 | Msa1041210 | 0.815404 | 9.407374e-52 | -8.615850e-47 |
| Msa0626630 | Msa1081930 | 0.820735 | 5.861575e-53 | -8.615850e-47 |
| Msa0626630 | Msa1083610 | 0.823481 | 1.353538e-53 | -8.615850e-47 |
| Msa0626630 | Msa1089450 | 0.814627 | 1.399310e-51 | -8.615850e-47 |
| Msa0626630 | Msa1093530 | 0.805872 | 1.082087e-49 | -8.615850e-47 |
| Msa0626630 | Msa1104140 | 0.804695 | 1.909543e-49 | -8.615850e-47 |
| Msa0626630 | Msa1106700 | 0.800894 | 1.163515e-48 | -8.615850e-47 |
| Msa0626630 | Msa1123380 | 0.800505 | 1.396845e-48 | -8.615850e-47 |
| Msa0626630 | Msa1123770 | 0.840196 | 1.005612e-57 | -8.615850e-47 |
| Msa0626630 | Msa1126830 | 0.835276 | 1.844219e-56 | -8.615850e-47 |
| Msa0626630 | Msa1127590 | 0.820754 | 5.803255e-53 | -8.615850e-47 |
| Msa0626630 | Msa1128600 | 0.859793 | 3.233397e-63 | -8.615850e-47 |
| Msa0626630 | Msa1132480 | 0.837560 | 4.835948e-57 | -8.615850e-47 |
| Msa0626630 | Msa1135890 | 0.807318 | 5.359065e-50 | -8.615850e-47 |
| Msa0626630 | Msa1145810 | 0.824658 | 7.162525e-54 | -8.615850e-47 |
| Msa0626630 | Msa1148910 | 0.834170 | 3.499407e-56 | -8.615850e-47 |
| Msa0626630 | Msa1153060 | 0.830530 | 2.789010e-55 | -8.615850e-47 |
| Msa0626630 | Msa1155170 | -0.829928 | 3.911788e-55 | -8.615850e-47 |
| Msa0626630 | Msa1156160 | 0.808307 | 3.303068e-50 | -8.615850e-47 |
| Msa0626630 | Msa1160590 | 0.830225 | 3.310662e-55 | -8.615850e-47 |
| Msa0626630 | Msa1165780 | 0.807614 | 4.637664e-50 | -8.615850e-47 |
| Msa0626630 | Msa1165940 | 0.817535 | 3.135903e-52 | -8.615850e-47 |
| Msa0626630 | Msa1169910 | 0.838710 | 2.446081e-57 | -8.615850e-47 |
| Msa0626630 | Msa1174780 | 0.830928 | 2.227673e-55 | -8.615850e-47 |
| Msa0626630 | Msa1181250 | 0.803224 | 3.861377e-49 | -8.615850e-47 |
| Msa0626630 | Msa1181910 | 0.816884 | 4.393439e-52 | -8.615850e-47 |
| Msa0626630 | Msa1208880 | 0.834749 | 2.504018e-56 | -8.615850e-47 |
| Msa0626630 | Msa1209200 | 0.860873 | 1.524187e-63 | -8.615850e-47 |
| Msa0626630 | Msa1209260 | 0.808805 | 2.585126e-50 | -8.615850e-47 |
| Msa0626630 | Msa1218450 | 0.822413 | 2.401100e-53 | -8.615850e-47 |
| Msa0626630 | Msa1225860 | -0.844497 | 7.287053e-59 | -8.615850e-47 |
| Msa0626630 | Msa1226470 | 0.851903 | 6.551717e-61 | -8.615850e-47 |
| Msa0626630 | Msa1245930 | 0.840191 | 1.008662e-57 | -8.615850e-47 |
| Msa0626630 | Msa1259060 | 0.846009 | 2.842931e-59 | -8.615850e-47 |
| Msa0626630 | Msa1262890 | 0.809428 | 1.901736e-50 | -8.615850e-47 |
| Msa0626630 | Msa1264210 | 0.831579 | 1.540886e-55 | -8.615850e-47 |
| Msa0626630 | Msa1265630 | 0.819464 | 1.145627e-52 | -8.615850e-47 |
| Msa0626630 | Msa1275680 | 0.815288 | 9.982358e-52 | -8.615850e-47 |
| Msa0626630 | Msa1294820 | 0.806166 | 9.388289e-50 | -8.615850e-47 |
| Msa0626630 | Msa1302380 | 0.825596 | 4.300072e-54 | -8.615850e-47 |
| Msa0626630 | Msa1303070 | 0.806855 | 6.717330e-50 | -8.615850e-47 |
| Msa0626630 | Msa1332590 | 0.851075 | 1.124112e-60 | -8.615850e-47 |
| Msa0626630 | Msa1332760 | 0.813942 | 1.982576e-51 | -8.615850e-47 |
| Msa0626630 | Msa1340200 | 0.801551 | 8.537324e-49 | -8.615850e-47 |
| Msa0626630 | Msa1351540 | 0.820550 | 6.465919e-53 | -8.615850e-47 |
| Msa0626630 | Msa1358250 | 0.836857 | 7.317969e-57 | -8.615850e-47 |
| Msa0626630 | Msa1360980 | 0.822273 | 2.587275e-53 | -8.615850e-47 |
| Msa0626630 | Msa1370450 | 0.814370 | 1.594967e-51 | -8.615850e-47 |
| Msa0626630 | Msa1374060 | 0.854178 | 1.463456e-61 | -8.615850e-47 |
| Msa0626630 | Msa1381350 | 0.857184 | 1.940338e-62 | -8.615850e-47 |
| Msa0626630 | Msa1382560 | 0.856034 | 4.226189e-62 | -8.615850e-47 |
| Msa0626630 | Msa1383530 | 0.801169 | 1.022342e-48 | -8.615850e-47 |
| Msa0626630 | Msa1383960 | 0.815670 | 8.209355e-52 | -8.615850e-47 |
| Msa0626630 | Msa1385720 | 0.841815 | 3.780226e-58 | -8.615850e-47 |
| Msa0626630 | Msa1392780 | 0.830005 | 3.746939e-55 | -8.615850e-47 |
| Msa0626630 | Msa1394290 | 0.826252 | 3.004524e-54 | -8.615850e-47 |
| Msa0626630 | Msa1400580 | 0.845439 | 4.058715e-59 | -8.615850e-47 |
| Msa0626630 | Msa1411950 | 0.805424 | 1.343946e-49 | -8.615850e-47 |
| Msa0626630 | Msa1411970 | 0.861742 | 8.285124e-64 | -8.615850e-47 |
| Msa0626630 | Msa1413620 | 0.821238 | 4.490826e-53 | -8.615850e-47 |
| Msa0626630 | Msa1419870 | 0.848429 | 6.163555e-60 | -8.615850e-47 |
| Msa0626630 | Msa1423350 | 0.809088 | 2.248676e-50 | -8.615850e-47 |
| Msa0626630 | Msa1425880 | 0.808937 | 2.423327e-50 | -8.615850e-47 |
| Msa0626630 | Msa1434090 | 0.856251 | 3.651251e-62 | -8.615850e-47 |
| Msa0626630 | Msa1434950 | 0.936277 | 2.247215e-97 | -8.615850e-47 |
| Msa0626630 | Msa1440310 | 0.816588 | 5.118897e-52 | -8.615850e-47 |
| Msa0626630 | Msa1443300 | 0.850183 | 2.002626e-60 | -8.615850e-47 |
| Msa0626630 | Msa1451160 | 0.806073 | 9.817604e-50 | -8.615850e-47 |
| Msa0626630 | Msa1457920 | 0.832879 | 7.345379e-56 | -8.615850e-47 |
| Msa0120880 | Msa0626630 | 0.800102 | 1.686662e-48 | -8.615850e-47 |
| Msa0127020 | Msa0626630 | 0.817649 | 2.955139e-52 | -8.615850e-47 |
| Msa0137990 | Msa0626630 | 0.820491 | 6.670905e-53 | -8.615850e-47 |
| Msa0144370 | Msa0626630 | 0.822255 | 2.612350e-53 | -8.615850e-47 |
| Msa0146280 | Msa0626630 | 0.847453 | 1.145327e-59 | -8.615850e-47 |
| Msa0150300 | Msa0626630 | 0.807963 | 3.909736e-50 | -8.615850e-47 |
| Msa0150860 | Msa0626630 | 0.800079 | 1.705584e-48 | -8.615850e-47 |
| Msa0159170 | Msa0626630 | 0.800409 | 1.461021e-48 | -8.615850e-47 |
| Msa0169280 | Msa0626630 | 0.816715 | 4.794211e-52 | -8.615850e-47 |
| Msa0170200 | Msa0626630 | 0.808580 | 2.888003e-50 | -8.615850e-47 |
| Msa0179190 | Msa0626630 | 0.821733 | 3.451614e-53 | -8.615850e-47 |
| Msa0183900 | Msa0626630 | 0.807051 | 6.105081e-50 | -8.615850e-47 |
| Msa0188350 | Msa0626630 | 0.808856 | 2.521952e-50 | -8.615850e-47 |
| Msa0188690 | Msa0626630 | 0.847074 | 1.455191e-59 | -8.615850e-47 |
| Msa0189300 | Msa0626630 | 0.829531 | 4.887630e-55 | -8.615850e-47 |
| Msa0189700 | Msa0626630 | 0.826330 | 2.878791e-54 | -8.615850e-47 |
| Msa0202410 | Msa0626630 | 0.812835 | 3.471796e-51 | -8.615850e-47 |
| Msa0204960 | Msa0626630 | 0.812092 | 5.045863e-51 | -8.615850e-47 |
| Msa0229170 | Msa0626630 | 0.816531 | 5.270464e-52 | -8.615850e-47 |
| Msa0231660 | Msa0626630 | 0.803588 | 3.245077e-49 | -8.615850e-47 |
| Msa0232010 | Msa0626630 | 0.832465 | 9.310951e-56 | -8.615850e-47 |
| Msa0232080 | Msa0626630 | 0.834279 | 3.284894e-56 | -8.615850e-47 |
| Msa0237210 | Msa0626630 | 0.800146 | 1.652888e-48 | -8.615850e-47 |
| Msa0372810 | Msa0626630 | 0.802704 | 4.944105e-49 | -8.615850e-47 |
| Msa0378970 | Msa0626630 | 0.820729 | 5.881143e-53 | -8.615850e-47 |
| Msa0388700 | Msa0626630 | 0.833445 | 5.311892e-56 | -8.615850e-47 |
| Msa0403500 | Msa0626630 | 0.815380 | 9.521802e-52 | -8.615850e-47 |
| Msa0406770 | Msa0626630 | 0.809542 | 1.796988e-50 | -8.615850e-47 |
| Msa0411430 | Msa0626630 | 0.802491 | 5.470762e-49 | -8.615850e-47 |
| Msa0419410 | Msa0626630 | 0.809391 | 1.936779e-50 | -8.615850e-47 |
| Msa0428580 | Msa0626630 | 0.812055 | 5.139232e-51 | -8.615850e-47 |
| Msa0437020 | Msa0626630 | 0.839641 | 1.403349e-57 | -8.615850e-47 |
| Msa0450400 | Msa0626630 | -0.818312 | 2.093282e-52 | -8.615850e-47 |
| Msa0474940 | Msa0626630 | 0.813335 | 2.697010e-51 | -8.615850e-47 |
| Msa0481030 | Msa0626630 | 0.805418 | 1.348037e-49 | -8.615850e-47 |
| Msa0481530 | Msa0626630 | 0.834174 | 3.491784e-56 | -8.615850e-47 |
| Msa0482130 | Msa0626630 | 0.813323 | 2.712972e-51 | -8.615850e-47 |
| Msa0240900 | Msa0626630 | 0.831007 | 2.130007e-55 | -8.615850e-47 |
| Msa0249580 | Msa0626630 | 0.827979 | 1.159675e-54 | -8.615850e-47 |
| Msa0258390 | Msa0626630 | 0.847273 | 1.283379e-59 | -8.615850e-47 |
| Msa0261170 | Msa0626630 | 0.843254 | 1.568642e-58 | -8.615850e-47 |
| Msa0270210 | Msa0626630 | 0.820417 | 6.937180e-53 | -8.615850e-47 |
| Msa0271530 | Msa0626630 | 0.808970 | 2.384079e-50 | -8.615850e-47 |
| Msa0274980 | Msa0626630 | 0.810219 | 1.285310e-50 | -8.615850e-47 |
| Msa0281530 | Msa0626630 | 0.806725 | 7.154982e-50 | -8.615850e-47 |
| Msa0288080 | Msa0626630 | 0.820362 | 7.138456e-53 | -8.615850e-47 |
| Msa0297610 | Msa0626630 | 0.814808 | 1.275675e-51 | -8.615850e-47 |
| Msa0307850 | Msa0626630 | 0.849075 | 4.079339e-60 | -8.615850e-47 |
| Msa0309750 | Msa0626630 | 0.802952 | 4.393539e-49 | -8.615850e-47 |
| Msa0315690 | Msa0626630 | 0.814068 | 1.859973e-51 | -8.615850e-47 |
| Msa0317970 | Msa0626630 | 0.819413 | 1.176884e-52 | -8.615850e-47 |
| Msa0321690 | Msa0626630 | 0.804860 | 1.763891e-49 | -8.615850e-47 |
| Msa0322240 | Msa0626630 | 0.836300 | 1.014796e-56 | -8.615850e-47 |
| Msa0322900 | Msa0626630 | 0.807360 | 5.251439e-50 | -8.615850e-47 |
| Msa0326480 | Msa0626630 | 0.835798 | 1.360212e-56 | -8.615850e-47 |
| Msa0335730 | Msa0626630 | 0.832441 | 9.437539e-56 | -8.615850e-47 |
| Msa0341690 | Msa0626630 | 0.832747 | 7.925292e-56 | -8.615850e-47 |
| Msa0357900 | Msa0626630 | 0.861074 | 1.324069e-63 | -8.615850e-47 |
| Msa0360210 | Msa0626630 | 0.810603 | 1.061907e-50 | -8.615850e-47 |
| Msa0493410 | Msa0626630 | 0.806347 | 8.597137e-50 | -8.615850e-47 |
| Msa0500470 | Msa0626630 | 0.806755 | 7.050553e-50 | -8.615850e-47 |
| Msa0518030 | Msa0626630 | 0.818053 | 2.396224e-52 | -8.615850e-47 |
| Msa0526420 | Msa0626630 | 0.800433 | 1.444760e-48 | -8.615850e-47 |
| Msa0529890 | Msa0626630 | 0.832151 | 1.113346e-55 | -8.615850e-47 |
| Msa0531230 | Msa0626630 | 0.845481 | 3.953654e-59 | -8.615850e-47 |
| Msa0531250 | Msa0626630 | 0.819170 | 1.336924e-52 | -8.615850e-47 |
| Msa0531650 | Msa0626630 | 0.810328 | 1.217234e-50 | -8.615850e-47 |
| Msa0539410 | Msa0626630 | 0.824452 | 8.012209e-54 | -8.615850e-47 |
| Msa0542090 | Msa0626630 | 0.806730 | 7.137472e-50 | -8.615850e-47 |
| Msa0542130 | Msa0626630 | 0.805784 | 1.129254e-49 | -8.615850e-47 |
| Msa0542490 | Msa0626630 | 0.840965 | 6.328693e-58 | -8.615850e-47 |
| Msa0554290 | Msa0626630 | 0.814412 | 1.561343e-51 | -8.615850e-47 |
| Msa0554920 | Msa0626630 | 0.827702 | 1.351709e-54 | -8.615850e-47 |
| Msa0556060 | Msa0626630 | 0.824956 | 6.094991e-54 | -8.615850e-47 |
| Msa0572840 | Msa0626630 | 0.823011 | 1.742672e-53 | -8.615850e-47 |
| Msa0573180 | Msa0626630 | 0.801521 | 8.658460e-49 | -8.615850e-47 |
| Msa0578140 | Msa0626630 | 0.965801 | 4.453733e-125 | -8.615850e-47 |
| Msa0580700 | Msa0626630 | 0.825759 | 3.933860e-54 | -8.615850e-47 |
| Msa0581110 | Msa0626630 | 0.839477 | 1.547841e-57 | -8.615850e-47 |
| Msa0581280 | Msa0626630 | 0.858539 | 7.684969e-63 | -8.615850e-47 |
| Msa0581470 | Msa0626630 | 0.814215 | 1.725813e-51 | -8.615850e-47 |
| Msa0583360 | Msa0626630 | -0.844878 | 5.755538e-59 | -8.615850e-47 |
| Msa0585560 | Msa0626630 | 0.837015 | 6.669005e-57 | -8.615850e-47 |
| Msa0586790 | Msa0626630 | 0.808938 | 2.421823e-50 | -8.615850e-47 |
| Msa0588090 | Msa0626630 | 0.825509 | 4.510606e-54 | -8.615850e-47 |
| Msa0588360 | Msa0626630 | 0.815015 | 1.147975e-51 | -8.615850e-47 |
| Msa0601150 | Msa0626630 | 0.847508 | 1.106467e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626630 | MtrunA17_Chr4g0002731 | 87.778 | 450 | 22 | 5 | 1 | 444 | 1 | 423 | 0.0 | 729 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0626630 | AT1G80620.1 | 39.073 | 453 | 187 | 14 | 16 | 432 | 15 | 414 | 3.85e-75 | 241 |
| Msa0626630 | AT1G15810.1 | 54.936 | 233 | 70 | 4 | 199 | 430 | 219 | 417 | 5.19e-75 | 241 |
Find 135 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGATTTAGGTTTAATTTA+TGG | 0.101635 | 4_3:-6425383 | Msa0626630:three_prime_UTR |
| AATATTTCTTGTATCATAAT+TGG | 0.161540 | 4_3:-6425298 | Msa0626630:three_prime_UTR |
| GAAGAAGCCAATCTCGTTTC+AGG | 0.197152 | 4_3:-6429950 | Msa0626630:CDS |
| TCAGCAGAGGACATGTTATC+TGG | 0.221149 | 4_3:+6428007 | None:intergenic |
| TATGTTGGGGTTTATTTAAT+TGG | 0.228847 | 4_3:+6425616 | None:intergenic |
| TTTGCTCAAGATATCATCTT+TGG | 0.250670 | 4_3:+6430029 | None:intergenic |
| GGAATCAGGTGCGGTGGTTT+TGG | 0.276997 | 4_3:+6429990 | None:intergenic |
| CGGGCTTTATAAGTATATTC+TGG | 0.291890 | 4_3:+6425662 | None:intergenic |
| TTAGCCAAGGTGAATGATTC+AGG | 0.297727 | 4_3:-6429691 | Msa0626630:CDS |
| GTGAATGATTCAGGGAGTTT+TGG | 0.301942 | 4_3:-6429682 | Msa0626630:CDS |
| CGTATCCGAAGCGGAATCTT+TGG | 0.307010 | 4_3:+6429900 | None:intergenic |
| TTGCTATTTGTTGATTGCTT+TGG | 0.309603 | 4_3:-6428200 | Msa0626630:CDS |
| TTATATATGCATGGTGAATT+AGG | 0.318193 | 4_3:-6429649 | Msa0626630:CDS |
| TACTAACATGAAGCTTTATT+AGG | 0.327657 | 4_3:+6429427 | None:intergenic |
| TTGTTACCGGATTCGATGTT+TGG | 0.341309 | 4_3:-6429733 | Msa0626630:CDS |
| AGTGGTGGAGAGTAGGGTTT+GGG | 0.342066 | 4_3:+6430210 | None:intergenic |
| ATTCTTCAGCCATGGATATA+TGG | 0.342367 | 4_3:+6425478 | None:intergenic |
| CGATGTTTGGGAAGGAGATA+AGG | 0.345042 | 4_3:-6429720 | Msa0626630:CDS |
| ACACTTGTAGAAGCAAAATA+TGG | 0.357125 | 4_3:+6425505 | None:intergenic |
| AGCTTGGAGTTCCACCAATC+AGG | 0.379248 | 4_3:+6428570 | None:intergenic |
| TCTTGTATCATAATTGGAAA+TGG | 0.387100 | 4_3:-6425292 | Msa0626630:three_prime_UTR |
| TAAAGCCCGGACTGGTAAAT+CGG | 0.389131 | 4_3:-6425648 | Msa0626630:CDS |
| TCTGACTTGTTGTAAGGATT+CGG | 0.391613 | 4_3:+6430122 | None:intergenic |
| AATATGTCAGCGGGGAATAG+TGG | 0.398052 | 4_3:-6429763 | Msa0626630:CDS |
| TGATGGAGTGGTGGAGAGTA+GGG | 0.398977 | 4_3:+6430204 | None:intergenic |
| CTATTCCCCGCTGACATATT+CGG | 0.403136 | 4_3:+6429766 | None:intergenic |
| TAGTGGGACGAGTTTGTTAC+CGG | 0.405301 | 4_3:-6429746 | Msa0626630:CDS |
| GCTTAGGAAATAATTCTGTT+TGG | 0.411342 | 4_3:-6425260 | None:intergenic |
| GAGTGGTGGAGAGTAGGGTT+TGG | 0.415098 | 4_3:+6430209 | None:intergenic |
| GTGATGGAGTGGTGGAGAGT+AGG | 0.417770 | 4_3:+6430203 | None:intergenic |
| TGCTTTAGGATGTGCATTCT+CGG | 0.419325 | 4_3:-6425796 | Msa0626630:intron |
| TGTGGCTCTGCTCGTGTTCA+AGG | 0.419529 | 4_3:-6427926 | Msa0626630:intron |
| TAAAGAGCATCTTGTTGAAA+AGG | 0.423407 | 4_3:-6428531 | Msa0626630:CDS |
| CTTAGAGAGAACAAAACAAT+AGG | 0.423531 | 4_3:+6425703 | None:intergenic |
| CCATAAATTAAACCTAAATC+AGG | 0.428382 | 4_3:+6425383 | None:intergenic |
| CTACAAAATAAACAATTGAT+TGG | 0.428999 | 4_3:+6425346 | None:intergenic |
| CTCAAGTGAAAGGAAAAGAT+TGG | 0.434328 | 4_3:-6429603 | Msa0626630:CDS |
| GTTAATAGATCATCGGAATC+AGG | 0.434445 | 4_3:+6429976 | None:intergenic |
| TGGAGGTGGAGAAGAGGTGA+TGG | 0.434925 | 4_3:+6430187 | None:intergenic |
| AAAACTACCATCGGTGGTGG+TGG | 0.439256 | 4_3:-6429874 | Msa0626630:CDS |
| GTTGAAGAAAGTGAGGGAAA+TGG | 0.440483 | 4_3:-6429554 | Msa0626630:CDS |
| TGTTACCGGATTCGATGTTT+GGG | 0.445980 | 4_3:-6429732 | Msa0626630:CDS |
| ATTGACTAAGCTGCTTGAAC+TGG | 0.450433 | 4_3:+6425534 | None:intergenic |
| TGATGATAGATGCTTAATCT+TGG | 0.455799 | 4_3:+6427709 | None:intergenic |
| GATGTTTGGGAAGGAGATAA+GGG | 0.455958 | 4_3:-6429719 | Msa0626630:CDS |
| GGTCTCCACCTCGGCGTCAC+CGG | 0.457444 | 4_3:+6429787 | None:intergenic |
| CTCTTCTCCACCTCCAACTC+CGG | 0.457603 | 4_3:-6430180 | Msa0626630:CDS |
| GAAATGGATAAATGAAGCTT+AGG | 0.459164 | 4_3:-6425276 | Msa0626630:three_prime_UTR |
| ACCGTCATTGTCACCGGAGT+TGG | 0.459507 | 4_3:+6430167 | None:intergenic |
| GTTGAACACTTTATTTGTAT+CGG | 0.460097 | 4_3:+6429498 | None:intergenic |
| AACTACCATCGGTGGTGGTG+GGG | 0.461512 | 4_3:-6429872 | Msa0626630:CDS |
| AGCGCCATTGTTGGTGGTGG+TGG | 0.462114 | 4_3:+6430258 | None:intergenic |
| GGAGGCTTTGACAAGTAGCT+TGG | 0.462551 | 4_3:+6428554 | None:intergenic |
| ATTGATATGTTGTCCCTGAT+TGG | 0.468754 | 4_3:-6428584 | Msa0626630:CDS |
| TACATATCCTGAAACGAGAT+TGG | 0.469151 | 4_3:+6429943 | None:intergenic |
| ACTACCATCGGTGGTGGTGG+GGG | 0.471057 | 4_3:-6429871 | Msa0626630:CDS |
| TGAGCTTCTGACTTGTTGTA+AGG | 0.477275 | 4_3:+6430116 | None:intergenic |
| CGGAGAAGAAGCGCCATTGT+TGG | 0.491513 | 4_3:+6430249 | None:intergenic |
| AAACTACCATCGGTGGTGGT+GGG | 0.493683 | 4_3:-6429873 | Msa0626630:CDS |
| TGCGAGGGAGAGAGAGGAGA+AGG | 0.494280 | 4_3:+6430063 | None:intergenic |
| TCCTTCCCAAACATCGAATC+CGG | 0.494755 | 4_3:+6429727 | None:intergenic |
| GTCGCCACCGTCATTGTCAC+CGG | 0.497517 | 4_3:+6430161 | None:intergenic |
| AGTTCAAGCAGCTTAGTCAA+TGG | 0.497786 | 4_3:-6425532 | Msa0626630:three_prime_UTR |
| GTGAGAGGTTGAAGAAAGTG+AGG | 0.507809 | 4_3:-6429561 | Msa0626630:CDS |
| GTCATTGTCACCGGAGTTGG+AGG | 0.510211 | 4_3:+6430170 | None:intergenic |
| CAGCAGAGGACATGTTATCT+GGG | 0.517850 | 4_3:+6428008 | None:intergenic |
| TTAGACTGGATAAAATCAGC+TGG | 0.522482 | 4_3:+6425569 | None:intergenic |
| ATTGTCACCGGAGTTGGAGG+TGG | 0.527310 | 4_3:+6430173 | None:intergenic |
| GGTGGTGGAGAAAGAGAAAG+AGG | 0.528464 | 4_3:+6430273 | None:intergenic |
| AAAGCCCGGACTGGTAAATC+GGG | 0.529645 | 4_3:-6425647 | Msa0626630:CDS |
| GTGGAGAAGAGGTGATGGAG+TGG | 0.532903 | 4_3:+6430192 | None:intergenic |
| ATATGTCAGCGGGGAATAGT+GGG | 0.534656 | 4_3:-6429762 | Msa0626630:CDS |
| TCAACAAGATGCTCTTTAGG+AGG | 0.535728 | 4_3:+6428536 | None:intergenic |
| GGCTAGTCAGACACTTAGAC+TGG | 0.536045 | 4_3:+6425555 | None:intergenic |
| TGGAGACCGAATATGTCAGC+GGG | 0.537439 | 4_3:-6429772 | Msa0626630:CDS |
| GAGAAGAGGTGATGGAGTGG+TGG | 0.540124 | 4_3:+6430195 | None:intergenic |
| AGAAGAAGCGCCATTGTTGG+TGG | 0.541690 | 4_3:+6430252 | None:intergenic |
| CTTCTGAGTTAATAGATCAT+CGG | 0.542609 | 4_3:+6429969 | None:intergenic |
| TAGGATGTGCATTCTCGGAA+AGG | 0.545917 | 4_3:-6425791 | Msa0626630:CDS |
| GCTTGGAGTTCCACCAATCA+GGG | 0.546915 | 4_3:+6428571 | None:intergenic |
| TTCTCCACCACCACCAACAA+TGG | 0.548692 | 4_3:-6430262 | Msa0626630:exon |
| TGTAAGGATTCGGAGAAGGA+GGG | 0.550289 | 4_3:+6430132 | None:intergenic |
| ATCATCAGTTCTACACAAGA+AGG | 0.554571 | 4_3:-6427693 | Msa0626630:intron |
| CTTCAACCTCTCACTCAACT+CGG | 0.554778 | 4_3:+6429570 | None:intergenic |
| GTCACCCGATTTACCAGTCC+GGG | 0.556020 | 4_3:+6425643 | None:intergenic |
| CGATTGCCGAGTTGAGTGAG+AGG | 0.557053 | 4_3:-6429576 | Msa0626630:CDS |
| TTGTAAGGATTCGGAGAAGG+AGG | 0.557469 | 4_3:+6430131 | None:intergenic |
| CGGAGTTGGAGGTGGAGAAG+AGG | 0.562478 | 4_3:+6430181 | None:intergenic |
| AGCAACACATTCTTCAGCCA+TGG | 0.562640 | 4_3:+6425470 | None:intergenic |
| ACCGGATTCGATGTTTGGGA+AGG | 0.563280 | 4_3:-6429728 | Msa0626630:CDS |
| TGATAGCAATGGTTCAAAAG+AGG | 0.564231 | 4_3:-6425766 | Msa0626630:CDS |
| TTGTTGTAAGGATTCGGAGA+AGG | 0.565751 | 4_3:+6430128 | None:intergenic |
| TAGCCAAGGTGAATGATTCA+GGG | 0.570378 | 4_3:-6429690 | Msa0626630:CDS |
| CGTCACCCGATTTACCAGTC+CGG | 0.571673 | 4_3:+6425642 | None:intergenic |
| GAAGGTGTTGTGTTTGACGT+TGG | 0.572394 | 4_3:+6430081 | None:intergenic |
| TCGATCCAAAGATTCCGCTT+CGG | 0.574006 | 4_3:-6429905 | Msa0626630:CDS |
| ATTGGACTTGATGTGATTCG+TGG | 0.579464 | 4_3:-6429847 | Msa0626630:CDS |
| AAGATGTCCGAGTCAGATTG+TGG | 0.579927 | 4_3:-6427944 | Msa0626630:CDS |
| CAGAATATACTTATAAAGCC+CGG | 0.580244 | 4_3:-6425661 | Msa0626630:CDS |
| TGGTGGAGAAAGAGAAAGAG+GGG | 0.580844 | 4_3:+6430275 | None:intergenic |
| TGAGAGGTTGAAGAAAGTGA+GGG | 0.583053 | 4_3:-6429560 | Msa0626630:CDS |
| GTGGTGGAGAAAGAGAAAGA+GGG | 0.584438 | 4_3:+6430274 | None:intergenic |
| ACTTGATGAATTTCATCATG+AGG | 0.585281 | 4_3:+6428236 | None:intergenic |
| TATACTTATAAAGCCCGGAC+TGG | 0.588412 | 4_3:-6425656 | Msa0626630:CDS |
| TTGGGAAGGAGATAAGGGAT+AGG | 0.591410 | 4_3:-6429714 | Msa0626630:CDS |
| AAATTGAGACCTCAAGTGAA+AGG | 0.593143 | 4_3:-6429613 | Msa0626630:CDS |
| AATCCCAGTCGGTTCTTCTG+AGG | 0.595536 | 4_3:+6425726 | None:intergenic |
| TCGAAAACTACCATCGGTGG+TGG | 0.596020 | 4_3:-6429877 | Msa0626630:CDS |
| AATACCTCAGAAGAACCGAC+TGG | 0.596907 | 4_3:-6425730 | Msa0626630:CDS |
| AATCAACAAATAGCAAGAGA+TGG | 0.599289 | 4_3:+6428207 | None:intergenic |
| AGTGTTGTTCCATATATCCA+TGG | 0.599971 | 4_3:-6425487 | Msa0626630:three_prime_UTR |
| GATAAGGGATAGGTTAGCCA+AGG | 0.602083 | 4_3:-6429704 | Msa0626630:CDS |
| AGAAGCGCCATTGTTGGTGG+TGG | 0.602122 | 4_3:+6430255 | None:intergenic |
| TCCAACTCCGGTGACAATGA+CGG | 0.604175 | 4_3:-6430168 | Msa0626630:CDS |
| GATATGTTGTCCCTGATTGG+TGG | 0.604709 | 4_3:-6428581 | Msa0626630:CDS |
| GACATATTCGGTCTCCACCT+CGG | 0.607216 | 4_3:+6429778 | None:intergenic |
| TAGACTGGATAAAATCAGCT+GGG | 0.619439 | 4_3:+6425570 | None:intergenic |
| AGACGCCGGTGACGCCGAGG+TGG | 0.621545 | 4_3:-6429792 | Msa0626630:CDS |
| AGCAGAGCCACAATCTGACT+CGG | 0.621918 | 4_3:+6427937 | None:intergenic |
| ATCATCGGAATCAGGTGCGG+TGG | 0.623646 | 4_3:+6429984 | None:intergenic |
| ACTCCCTGAATCATTCACCT+TGG | 0.637166 | 4_3:+6429687 | None:intergenic |
| ACTGTTAGGTTATATATGCA+TGG | 0.640796 | 4_3:-6429658 | Msa0626630:CDS |
| TCGGAAAGGTCTGATAGCAA+TGG | 0.642289 | 4_3:-6425777 | Msa0626630:CDS |
| ATCAGACGCCGGTGACGCCG+AGG | 0.642782 | 4_3:-6429795 | Msa0626630:CDS |
| GATACGTCGAAAACTACCAT+CGG | 0.667277 | 4_3:-6429883 | Msa0626630:CDS |
| TGATACAAGAAATATTACGA+TGG | 0.667765 | 4_3:+6425305 | None:intergenic |
| ATACCTCAGAAGAACCGACT+GGG | 0.671133 | 4_3:-6425729 | Msa0626630:CDS |
| TAGATCATCGGAATCAGGTG+CGG | 0.679666 | 4_3:+6429981 | None:intergenic |
| AAATTCGACGAATCAGACGC+CGG | 0.695623 | 4_3:-6429806 | Msa0626630:CDS |
| ACGTCGAAAACTACCATCGG+TGG | 0.701049 | 4_3:-6429880 | Msa0626630:CDS |
| GTGGAGACCGAATATGTCAG+CGG | 0.711187 | 4_3:-6429773 | Msa0626630:CDS |
| AAAACAATAGGAATCCCAGT+CGG | 0.725069 | 4_3:+6425715 | None:intergenic |
| AACTCCGGTGACAATGACGG+TGG | 0.731984 | 4_3:-6430165 | Msa0626630:CDS |
| TTACGATGGAAAAGACAACA+AGG | 0.736796 | 4_3:+6425319 | None:intergenic |
| GGAGACCGAATATGTCAGCG+GGG | 0.770843 | 4_3:-6429771 | Msa0626630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAAATCTATTGTAGA+TGG | - | chr4_3:6426854-6426873 | Msa0626630:intron | 15.0% |
| !! | TATATGAAAAATATAAGTGA+TGG | - | chr4_3:6426949-6426968 | Msa0626630:intron | 15.0% |
| !! | AATATATTAATGTTTGACTA+TGG | + | chr4_3:6427282-6427301 | None:intergenic | 15.0% |
| !!! | TTCTTTTAAATCTAGTATAA+CGG | - | chr4_3:6428080-6428099 | Msa0626630:intron | 15.0% |
| !!! | TTTTTGAATTTTAAGTTTGT+TGG | + | chr4_3:6429030-6429049 | None:intergenic | 15.0% |
| !!! | TCTATTTTTAATCATGTAAT+TGG | + | chr4_3:6429256-6429275 | None:intergenic | 15.0% |
| !!! | TTTTTCAATTAGTTTATGTT+GGG | + | chr4_3:6429978-6429997 | None:intergenic | 15.0% |
| !!! | TTTTTTCAATTAGTTTATGT+TGG | + | chr4_3:6429979-6429998 | None:intergenic | 15.0% |
| !! | AATATTTCTTGTATCATAAT+TGG | - | chr4_3:6430279-6430298 | Msa0626630:five_prime_UTR | 15.0% |
| !! | TTTATCATTGATACTAGATA+AGG | - | chr4_3:6426447-6426466 | Msa0626630:intron | 20.0% |
| !! | ATGACCAAAATATATTTGTT+TGG | + | chr4_3:6426628-6426647 | None:intergenic | 20.0% |
| !!! | AACAAATATATTTTGGTCAT+AGG | - | chr4_3:6426628-6426647 | Msa0626630:intron | 20.0% |
| !!! | ACAAATATATTTTGGTCATA+GGG | - | chr4_3:6426629-6426648 | Msa0626630:intron | 20.0% |
| !!! | AGCATTTTAGATTAATTGAA+TGG | + | chr4_3:6427237-6427256 | None:intergenic | 20.0% |
| !! | TAATAGCTTAAAAAAAAGTG+GGG | + | chr4_3:6427318-6427337 | None:intergenic | 20.0% |
| !! | GTAATAGCTTAAAAAAAAGT+GGG | + | chr4_3:6427319-6427338 | None:intergenic | 20.0% |
| !! | TGTAATAGCTTAAAAAAAAG+TGG | + | chr4_3:6427320-6427339 | None:intergenic | 20.0% |
| !! | TGTTCGATATTAAATTTAGA+CGG | - | chr4_3:6427710-6427729 | Msa0626630:CDS | 20.0% |
| !! | TAAAGTATAGCAAACATATT+TGG | + | chr4_3:6427738-6427757 | None:intergenic | 20.0% |
| !!! | TACTAATTTTCTTTCATGAT+TGG | - | chr4_3:6427756-6427775 | Msa0626630:intron | 20.0% |
| !!! | AGTGTTTGGAATATATTAAT+AGG | - | chr4_3:6427783-6427802 | Msa0626630:intron | 20.0% |
| !! | AAAAAAATTAGTACTAGAGT+TGG | + | chr4_3:6428209-6428228 | None:intergenic | 20.0% |
| !! | GAATATTTATAAAGTTGTAC+AGG | + | chr4_3:6428397-6428416 | None:intergenic | 20.0% |
| !! | ACTTTATAAATATTCTGCAA+AGG | - | chr4_3:6428402-6428421 | Msa0626630:intron | 20.0% |
| !! | CTGGTAAAGATTAAAAATAA+GGG | + | chr4_3:6428595-6428614 | None:intergenic | 20.0% |
| !! | ACTGGTAAAGATTAAAAATA+AGG | + | chr4_3:6428596-6428615 | None:intergenic | 20.0% |
| !!! | GAAAATTGTTTTAGTTAACA+TGG | + | chr4_3:6428805-6428824 | None:intergenic | 20.0% |
| !!! | TGTTAACTAAAACAATTTTC+AGG | - | chr4_3:6428805-6428824 | Msa0626630:intron | 20.0% |
| !! | TCATAAAAATCATAGCTTAA+AGG | - | chr4_3:6428911-6428930 | Msa0626630:intron | 20.0% |
| !!! | ACAATATTCTTTTACTAAGA+TGG | + | chr4_3:6429082-6429101 | None:intergenic | 20.0% |
| !! | TCTTAGTAAAAGAATATTGT+TGG | - | chr4_3:6429082-6429101 | Msa0626630:intron | 20.0% |
| !! | TTATGAGAAATGAAATACTA+GGG | + | chr4_3:6429339-6429358 | None:intergenic | 20.0% |
| !! | TGAACATAAGAATTTAATCA+GGG | + | chr4_3:6429472-6429491 | None:intergenic | 20.0% |
| !! | ATGAACATAAGAATTTAATC+AGG | + | chr4_3:6429473-6429492 | None:intergenic | 20.0% |
| !! | CCAATTCAAAATTATATTGA+AGG | + | chr4_3:6429537-6429556 | None:intergenic | 20.0% |
| !!! | CCTTCAATATAATTTTGAAT+TGG | - | chr4_3:6429534-6429553 | Msa0626630:CDS | 20.0% |
| !!! | TTTTCAATTAGTTTATGTTG+GGG | + | chr4_3:6429977-6429996 | None:intergenic | 20.0% |
| !! | TCAGGCAAAAATAATATAAT+GGG | + | chr4_3:6430179-6430198 | None:intergenic | 20.0% |
| !! | ATCAGGCAAAAATAATATAA+TGG | + | chr4_3:6430180-6430199 | None:intergenic | 20.0% |
| !!! | ATATTATTTTTGCCTGATTT+AGG | - | chr4_3:6430182-6430201 | Msa0626630:CDS | 20.0% |
| !! | CTACAAAATAAACAATTGAT+TGG | + | chr4_3:6430234-6430253 | None:intergenic | 20.0% |
| !!! | CAATCAATTGTTTATTTTGT+AGG | - | chr4_3:6430232-6430251 | Msa0626630:CDS | 20.0% |
| ! | TTATATATGCATGGTGAATT+AGG | - | chr4_3:6425928-6425947 | Msa0626630:intron | 25.0% |
| !! | GTTGAACACTTTATTTGTAT+CGG | + | chr4_3:6426082-6426101 | None:intergenic | 25.0% |
| !!! | TACTAACATGAAGCTTTATT+AGG | + | chr4_3:6426153-6426172 | None:intergenic | 25.0% |
| ! | ATCATCGTATCATAACTAAA+AGG | + | chr4_3:6426230-6426249 | None:intergenic | 25.0% |
| !!! | TTGTTTTGCAATACATGTTT+AGG | - | chr4_3:6426369-6426388 | Msa0626630:intron | 25.0% |
| ! | CTATGTTTGGTAAAAAATAG+TGG | - | chr4_3:6426392-6426411 | Msa0626630:intron | 25.0% |
| !!! | CTCATAGTTGATAAATTAGT+GGG | - | chr4_3:6426492-6426511 | Msa0626630:intron | 25.0% |
| !!! | ACAAGTTTAAGCTTTTTTAC+TGG | + | chr4_3:6426591-6426610 | None:intergenic | 25.0% |
| !! | TGTGCCAAACAAATATATTT+TGG | - | chr4_3:6426621-6426640 | Msa0626630:intron | 25.0% |
| !!! | CAAATATATTTTGGTCATAG+GGG | - | chr4_3:6426630-6426649 | Msa0626630:intron | 25.0% |
| ! | ATTGACAACACTTTATACTA+AGG | + | chr4_3:6426705-6426724 | None:intergenic | 25.0% |
| !!! | AGTATAAAGTGTTGTCAATT+AGG | - | chr4_3:6426706-6426725 | Msa0626630:intron | 25.0% |
| !!! | GTATAAAGTGTTGTCAATTA+GGG | - | chr4_3:6426707-6426726 | Msa0626630:intron | 25.0% |
| !!! | TATAAAGTGTTGTCAATTAG+GGG | - | chr4_3:6426708-6426727 | Msa0626630:intron | 25.0% |
| ! | AATATAGAGTTATAAACCAC+AGG | + | chr4_3:6427192-6427211 | None:intergenic | 25.0% |
| ! | GGTTAATTCAAAATATCAAG+CGG | + | chr4_3:6427429-6427448 | None:intergenic | 25.0% |
| !!! | GGCACATTTTGTTTTTTTAA+TGG | - | chr4_3:6427490-6427509 | Msa0626630:intron | 25.0% |
| !!! | AATTTTCAATTTTTCAGCAG+AGG | + | chr4_3:6427586-6427605 | None:intergenic | 25.0% |
| ! | GTTCGATATTAAATTTAGAC+GGG | - | chr4_3:6427711-6427730 | Msa0626630:CDS | 25.0% |
| ! | AACATACAAATCTTCTATTG+AGG | + | chr4_3:6427978-6427997 | None:intergenic | 25.0% |
| ! | AACAATGTTTGTACATCAAA+TGG | + | chr4_3:6428004-6428023 | None:intergenic | 25.0% |
| !! | ATTTTACAGACTATGAAAAC+TGG | + | chr4_3:6428119-6428138 | None:intergenic | 25.0% |
| ! | TTTAATCTTTACCAGTTAAC+TGG | - | chr4_3:6428600-6428619 | Msa0626630:intron | 25.0% |
| ! | TTGCTACATAAACAATATGT+TGG | + | chr4_3:6428772-6428791 | None:intergenic | 25.0% |
| ! | TATCTCAGACAAATTAAGAT+GGG | - | chr4_3:6428836-6428855 | Msa0626630:intron | 25.0% |
| ! | ATTGGGTATTATTATGAAGA+TGG | - | chr4_3:6428860-6428879 | Msa0626630:intron | 25.0% |
| ! | TTGGGTATTATTATGAAGAT+GGG | - | chr4_3:6428861-6428880 | Msa0626630:intron | 25.0% |
| ! | TTATTGTTACTCATGTCTAT+GGG | + | chr4_3:6428969-6428988 | None:intergenic | 25.0% |
| !! | AAAGAATATTGTTGGTAGAT+TGG | - | chr4_3:6429090-6429109 | Msa0626630:intron | 25.0% |
| ! | AATATCATTCACATCGAAAT+AGG | - | chr4_3:6429227-6429246 | Msa0626630:intron | 25.0% |
| ! | TGATTAAAAATAGACTGACA+TGG | - | chr4_3:6429262-6429281 | Msa0626630:intron | 25.0% |
| ! | CTTATGAGAAATGAAATACT+AGG | + | chr4_3:6429340-6429359 | None:intergenic | 25.0% |
| ! | AAAATTACAACTTCCAACAT+AGG | + | chr4_3:6429382-6429401 | None:intergenic | 25.0% |
| ! | ATATAGCATAAATTGAAGCA+AGG | + | chr4_3:6429610-6429629 | None:intergenic | 25.0% |
| ! | TATGTTGGGGTTTATTTAAT+TGG | + | chr4_3:6429964-6429983 | None:intergenic | 25.0% |
| ! | TTCGTACAGAAAAAAGAAAA+TGG | + | chr4_3:6430133-6430152 | None:intergenic | 25.0% |
| ! | CCATAAATTAAACCTAAATC+AGG | + | chr4_3:6430197-6430216 | None:intergenic | 25.0% |
| !! | CCTGATTTAGGTTTAATTTA+TGG | - | chr4_3:6430194-6430213 | Msa0626630:CDS | 25.0% |
| ! | TGATACAAGAAATATTACGA+TGG | + | chr4_3:6430275-6430294 | None:intergenic | 25.0% |
| ! | TCTTGTATCATAATTGGAAA+TGG | - | chr4_3:6430285-6430304 | Msa0626630:five_prime_UTR | 25.0% |
| TTTGCTCAAGATATCATCTT+TGG | + | chr4_3:6425551-6425570 | None:intergenic | 30.0% | |
| CTTCTGAGTTAATAGATCAT+CGG | + | chr4_3:6425611-6425630 | None:intergenic | 30.0% | |
| ACTGTTAGGTTATATATGCA+TGG | - | chr4_3:6425919-6425938 | Msa0626630:intron | 30.0% | |
| TCGGATATACTAACTCAAAA+GGG | + | chr4_3:6426299-6426318 | None:intergenic | 30.0% | |
| ATCGGATATACTAACTCAAA+AGG | + | chr4_3:6426300-6426319 | None:intergenic | 30.0% | |
| ATACATGTTTAGGCTATGTT+TGG | - | chr4_3:6426379-6426398 | Msa0626630:intron | 30.0% | |
| ! | GTTTGGTAAAAAATAGTGGA+TGG | - | chr4_3:6426396-6426415 | Msa0626630:intron | 30.0% |
| !! | GCTCATAGTTGATAAATTAG+TGG | - | chr4_3:6426491-6426510 | Msa0626630:intron | 30.0% |
| !! | TGATAAATTAGTGGGTTGAA+TGG | - | chr4_3:6426500-6426519 | Msa0626630:intron | 30.0% |
| !! | GATAAATTAGTGGGTTGAAT+GGG | - | chr4_3:6426501-6426520 | Msa0626630:intron | 30.0% |
| !! | ATAAATTAGTGGGTTGAATG+GGG | - | chr4_3:6426502-6426521 | Msa0626630:intron | 30.0% |
| !! | ACAAATTTCTGAGGTTATAG+AGG | + | chr4_3:6426668-6426687 | None:intergenic | 30.0% |
| ATCATTGTATATTGCATCTC+TGG | - | chr4_3:6426808-6426827 | Msa0626630:intron | 30.0% | |
| ! | GAAAAATATAAGTGATGGTG+TGG | - | chr4_3:6426954-6426973 | Msa0626630:intron | 30.0% |
| ! | TTTTCAACAAGATGCTCTTT+AGG | + | chr4_3:6427047-6427066 | None:intergenic | 30.0% |
| !! | TAAAGAGCATCTTGTTGAAA+AGG | - | chr4_3:6427046-6427065 | Msa0626630:intron | 30.0% |
| ACTTGATGAATTTCATCATG+AGG | + | chr4_3:6427344-6427363 | None:intergenic | 30.0% | |
| AATCAACAAATAGCAAGAGA+TGG | + | chr4_3:6427373-6427392 | None:intergenic | 30.0% | |
| !! | TTGCTATTTGTTGATTGCTT+TGG | - | chr4_3:6427377-6427396 | Msa0626630:intron | 30.0% |
| !! | GATATTTTGAATTAACCTCG+TGG | - | chr4_3:6427432-6427451 | Msa0626630:intron | 30.0% |
| CAACATAGAGTGGAAATATT+AGG | + | chr4_3:6427534-6427553 | None:intergenic | 30.0% | |
| TGATGATAGATGCTTAATCT+TGG | + | chr4_3:6427871-6427890 | None:intergenic | 30.0% | |
| ! | TAGTCTGTAAAATTTTCGTC+TGG | - | chr4_3:6428126-6428145 | Msa0626630:intron | 30.0% |
| TATTTGAATGTGCTTCTGTT+AGG | - | chr4_3:6428155-6428174 | Msa0626630:intron | 30.0% | |
| ! | TCATAACCAGTGTTGTTAAA+TGG | - | chr4_3:6428258-6428277 | Msa0626630:intron | 30.0% |
| !!! | GATTTTTTGACAACCACTAT+AGG | - | chr4_3:6428294-6428313 | Msa0626630:intron | 30.0% |
| !!! | GTGTTTATATGACGGATTTT+TGG | - | chr4_3:6428343-6428362 | Msa0626630:intron | 30.0% |
| ! | TCTTTTTATAAAAGCTTCCG+AGG | - | chr4_3:6428512-6428531 | Msa0626630:intron | 30.0% |
| TTTATCTCTCTGAACTTACA+GGG | + | chr4_3:6428626-6428645 | None:intergenic | 30.0% | |
| ! | TTTTATCTCTCTGAACTTAC+AGG | + | chr4_3:6428627-6428646 | None:intergenic | 30.0% |
| GTATCTCAGACAAATTAAGA+TGG | - | chr4_3:6428835-6428854 | Msa0626630:intron | 30.0% | |
| AGACAAATTAAGATGGGTAT+TGG | - | chr4_3:6428842-6428861 | Msa0626630:intron | 30.0% | |
| GACAAATTAAGATGGGTATT+GGG | - | chr4_3:6428843-6428862 | Msa0626630:intron | 30.0% | |
| ! | AGCTATGATTTTTATGACTC+TGG | + | chr4_3:6428908-6428927 | None:intergenic | 30.0% |
| GTTATTGTTACTCATGTCTA+TGG | + | chr4_3:6428970-6428989 | None:intergenic | 30.0% | |
| TTCCAACATAGGAACTAAAA+TGG | + | chr4_3:6429371-6429390 | None:intergenic | 30.0% | |
| AGTTCATCAGTAGTTTAACA+TGG | - | chr4_3:6429414-6429433 | Msa0626630:intron | 30.0% | |
| GTTCATCAGTAGTTTAACAT+GGG | - | chr4_3:6429415-6429434 | Msa0626630:intron | 30.0% | |
| TTCATCAGTAGTTTAACATG+GGG | - | chr4_3:6429416-6429435 | Msa0626630:intron | 30.0% | |
| GAATTTAATCAGGGATCAAA+TGG | + | chr4_3:6429463-6429482 | None:intergenic | 30.0% | |
| TGTGAACAAAATCTTAACCT+CGG | - | chr4_3:6429511-6429530 | Msa0626630:CDS | 30.0% | |
| AATTCTTTCTGTGATGCTTT+AGG | - | chr4_3:6429767-6429786 | Msa0626630:CDS | 30.0% | |
| CTTAGAGAGAACAAAACAAT+AGG | + | chr4_3:6429877-6429896 | None:intergenic | 30.0% | |
| !! | TGTTTTGTTCTCTCTAAGTT+AGG | - | chr4_3:6429879-6429898 | Msa0626630:CDS | 30.0% |
| CAGAATATACTTATAAAGCC+CGG | - | chr4_3:6429916-6429935 | Msa0626630:CDS | 30.0% | |
| ACACTTGTAGAAGCAAAATA+TGG | + | chr4_3:6430075-6430094 | None:intergenic | 30.0% | |
| GAAATGGATAAATGAAGCTT+AGG | - | chr4_3:6430301-6430320 | Msa0626630:five_prime_UTR | 30.0% | |
| !! | TCTGACTTGTTGTAAGGATT+CGG | + | chr4_3:6425458-6425477 | None:intergenic | 35.0% |
| GTTAATAGATCATCGGAATC+AGG | + | chr4_3:6425604-6425623 | None:intergenic | 35.0% | |
| TACATATCCTGAAACGAGAT+TGG | + | chr4_3:6425637-6425656 | None:intergenic | 35.0% | |
| AAATTGAGACCTCAAGTGAA+AGG | - | chr4_3:6425964-6425983 | Msa0626630:intron | 35.0% | |
| ! | CAATCTTTTCCTTTCACTTG+AGG | + | chr4_3:6425976-6425995 | None:intergenic | 35.0% |
| CTCAAGTGAAAGGAAAAGAT+TGG | - | chr4_3:6425974-6425993 | Msa0626630:intron | 35.0% | |
| ! | CATTTCATCTTCCTCTAAAG+AGG | - | chr4_3:6426270-6426289 | Msa0626630:intron | 35.0% |
| TGATAAAGTTCATTCGCTGT+CGG | + | chr4_3:6426434-6426453 | None:intergenic | 35.0% | |
| TCTAGTAGTGTTTGAGCTTA+TGG | + | chr4_3:6426542-6426561 | None:intergenic | 35.0% | |
| TTTGGCAAGACAAATTTCTG+AGG | + | chr4_3:6426677-6426696 | None:intergenic | 35.0% | |
| CTTTATACTAAGGCTCTGTT+TGG | + | chr4_3:6426695-6426714 | None:intergenic | 35.0% | |
| ATAGGTCCACTATTGTTTAG+TGG | - | chr4_3:6426733-6426752 | Msa0626630:intron | 35.0% | |
| CCAATTCCACTAAACAATAG+TGG | + | chr4_3:6426742-6426761 | None:intergenic | 35.0% | |
| CCACTATTGTTTAGTGGAAT+TGG | - | chr4_3:6426739-6426758 | Msa0626630:intron | 35.0% | |
| ATATTCAGTGATGTCAATCG+CGG | + | chr4_3:6426788-6426807 | None:intergenic | 35.0% | |
| TTTATAAAGCTCTTGCCAAG+TGG | - | chr4_3:6426886-6426905 | Msa0626630:intron | 35.0% | |
| ATTGATATGTTGTCCCTGAT+TGG | - | chr4_3:6426993-6427012 | Msa0626630:intron | 35.0% | |
| CAATTGTAGCTATCAGATGA+AGG | + | chr4_3:6427150-6427169 | None:intergenic | 35.0% | |
| TTTCCGTAATTGAGAGTTGT+AGG | - | chr4_3:6427403-6427422 | Msa0626630:intron | 35.0% | |
| ! | TATTTTGCTTCACATGTCGA+TGG | - | chr4_3:6427464-6427483 | Msa0626630:intron | 35.0% |
| ATCATCAGTTCTACACAAGA+AGG | - | chr4_3:6427884-6427903 | Msa0626630:intron | 35.0% | |
| !!! | TTTTTTAACACCCTACCGTA+TGG | - | chr4_3:6428228-6428247 | Msa0626630:CDS | 35.0% |
| !! | GTTAAATGGCATTGGTTTAG+CGG | - | chr4_3:6428272-6428291 | Msa0626630:intron | 35.0% |
| ! | CACTATAGGCATTTTGTGAA+GGG | - | chr4_3:6428308-6428327 | Msa0626630:intron | 35.0% |
| ! | ACTATAGGCATTTTGTGAAG+GGG | - | chr4_3:6428309-6428328 | Msa0626630:intron | 35.0% |
| AAATATTCTGCAAAGGAGAC+TGG | - | chr4_3:6428409-6428428 | Msa0626630:intron | 35.0% | |
| AATATTCTGCAAAGGAGACT+GGG | - | chr4_3:6428410-6428429 | Msa0626630:intron | 35.0% | |
| GATTGAGATTGAGATTGAGA+TGG | + | chr4_3:6428717-6428736 | None:intergenic | 35.0% | |
| ATCTCAATCTCAATCTCACT+TGG | - | chr4_3:6428722-6428741 | Msa0626630:intron | 35.0% | |
| ATTGTTTATGTAGCAAGCTC+TGG | - | chr4_3:6428776-6428795 | Msa0626630:intron | 35.0% | |
| ACTGACATGGCTTAATAGAT+GGG | - | chr4_3:6429275-6429294 | Msa0626630:intron | 35.0% | |
| ATAGATGGGAATGTGTTTAC+AGG | - | chr4_3:6429289-6429308 | Msa0626630:intron | 35.0% | |
| ACATAGGAACTAAAATGGAG+TGG | + | chr4_3:6429366-6429385 | None:intergenic | 35.0% | |
| !!! | CTCCATTTTAGTTCCTATGT+TGG | - | chr4_3:6429366-6429385 | Msa0626630:intron | 35.0% |
| CAAAATTATATTGAAGGCCG+AGG | + | chr4_3:6429531-6429550 | None:intergenic | 35.0% | |
| TATTCATTGCACACTAGGAT+GGG | + | chr4_3:6429634-6429653 | None:intergenic | 35.0% | |
| ATTCATGTGACTAGTGATGA+GGG | + | chr4_3:6429658-6429677 | None:intergenic | 35.0% | |
| AATTCATGTGACTAGTGATG+AGG | + | chr4_3:6429659-6429678 | None:intergenic | 35.0% | |
| TCTTTGACTGGGAGTAATTA+AGG | + | chr4_3:6429691-6429710 | None:intergenic | 35.0% | |
| TTAATTACTCCCAGTCAAAG+AGG | - | chr4_3:6429690-6429709 | Msa0626630:CDS | 35.0% | |
| AATAGTAATACTAGCCAGAC+CGG | + | chr4_3:6429734-6429753 | None:intergenic | 35.0% | |
| TGATAGCAATGGTTCAAAAG+AGG | - | chr4_3:6429811-6429830 | Msa0626630:CDS | 35.0% | |
| AAAACAATAGGAATCCCAGT+CGG | + | chr4_3:6429865-6429884 | None:intergenic | 35.0% | |
| ! | CGGGCTTTATAAGTATATTC+TGG | + | chr4_3:6429918-6429937 | None:intergenic | 35.0% |
| TAGACTGGATAAAATCAGCT+GGG | + | chr4_3:6430010-6430029 | None:intergenic | 35.0% | |
| TTAGACTGGATAAAATCAGC+TGG | + | chr4_3:6430011-6430030 | None:intergenic | 35.0% | |
| ! | AGTGTTGTTCCATATATCCA+TGG | - | chr4_3:6430090-6430109 | Msa0626630:CDS | 35.0% |
| ATTCTTCAGCCATGGATATA+TGG | + | chr4_3:6430102-6430121 | None:intergenic | 35.0% | |
| TTACGATGGAAAAGACAACA+AGG | + | chr4_3:6430261-6430280 | None:intergenic | 35.0% | |
| !!! | GAGGGGTTTTTCTGAGATTA+GGG | + | chr4_3:6425288-6425307 | None:intergenic | 40.0% |
| !!! | AGAGGGGTTTTTCTGAGATT+AGG | + | chr4_3:6425289-6425308 | None:intergenic | 40.0% |
| !!! | TGGGTTTTGTGGTTTTGAGA+CGG | + | chr4_3:6425351-6425370 | None:intergenic | 40.0% |
| TTGTTGTAAGGATTCGGAGA+AGG | + | chr4_3:6425452-6425471 | None:intergenic | 40.0% | |
| !! | TGAGCTTCTGACTTGTTGTA+AGG | + | chr4_3:6425464-6425483 | None:intergenic | 40.0% |
| !! | TTGGATTCGTTTTGTTGCGA+GGG | + | chr4_3:6425532-6425551 | None:intergenic | 40.0% |
| !! | TTTGGATTCGTTTTGTTGCG+AGG | + | chr4_3:6425533-6425552 | None:intergenic | 40.0% |
| GATACGTCGAAAACTACCAT+CGG | - | chr4_3:6425694-6425713 | Msa0626630:CDS | 40.0% | |
| ATTGGACTTGATGTGATTCG+TGG | - | chr4_3:6425730-6425749 | Msa0626630:CDS | 40.0% | |
| TTGTTACCGGATTCGATGTT+TGG | - | chr4_3:6425844-6425863 | Msa0626630:intron | 40.0% | |
| TGTTACCGGATTCGATGTTT+GGG | - | chr4_3:6425845-6425864 | Msa0626630:intron | 40.0% | |
| GATGTTTGGGAAGGAGATAA+GGG | - | chr4_3:6425858-6425877 | Msa0626630:intron | 40.0% | |
| TTAGCCAAGGTGAATGATTC+AGG | - | chr4_3:6425886-6425905 | Msa0626630:intron | 40.0% | |
| TAGCCAAGGTGAATGATTCA+GGG | - | chr4_3:6425887-6425906 | Msa0626630:intron | 40.0% | |
| ! | GTGAATGATTCAGGGAGTTT+TGG | - | chr4_3:6425895-6425914 | Msa0626630:intron | 40.0% |
| TGAGAGGTTGAAGAAAGTGA+GGG | - | chr4_3:6426017-6426036 | Msa0626630:intron | 40.0% | |
| GTTGAAGAAAGTGAGGGAAA+TGG | - | chr4_3:6426023-6426042 | Msa0626630:intron | 40.0% | |
| GATGATAGACTAGAGAAGCT+TGG | - | chr4_3:6426247-6426266 | Msa0626630:intron | 40.0% | |
| CAAAAGGGTTTCCTCTTTAG+AGG | + | chr4_3:6426284-6426303 | None:intergenic | 40.0% | |
| GATAAAGTTCATTCGCTGTC+GGG | + | chr4_3:6426433-6426452 | None:intergenic | 40.0% | |
| CTAGATAAGGTAGCTGATAG+CGG | - | chr4_3:6426460-6426479 | Msa0626630:intron | 40.0% | |
| TGTTGTCAATTAGGGGCTAT+AGG | - | chr4_3:6426715-6426734 | Msa0626630:intron | 40.0% | |
| ATATTGCATCTCTGGTCATG+TGG | - | chr4_3:6426816-6426835 | Msa0626630:intron | 40.0% | |
| TCAACAAGATGCTCTTTAGG+AGG | + | chr4_3:6427044-6427063 | None:intergenic | 40.0% | |
| CTGTCCTTCTTGAATTGTTG+AGG | - | chr4_3:6427118-6427137 | Msa0626630:intron | 40.0% | |
| AGCACCTCAACAATTCAAGA+AGG | + | chr4_3:6427125-6427144 | None:intergenic | 40.0% | |
| AAAATAATCCAGACACCACG+AGG | + | chr4_3:6427450-6427469 | None:intergenic | 40.0% | |
| GTACTGGAATCAACATAGAG+TGG | + | chr4_3:6427544-6427563 | None:intergenic | 40.0% | |
| ! | TGTTATCTGGGTGAAAGTAC+TGG | + | chr4_3:6427560-6427579 | None:intergenic | 40.0% |
| TCATGATTGGATCGAGTGTT+TGG | - | chr4_3:6427769-6427788 | Msa0626630:intron | 40.0% | |
| TGAATGTGCTTCTGTTAGGT+AGG | - | chr4_3:6428159-6428178 | Msa0626630:intron | 40.0% | |
| ! | CCAATGCCATTTAACAACAC+TGG | + | chr4_3:6428267-6428286 | None:intergenic | 40.0% |
| ! | CCAGTGTTGTTAAATGGCAT+TGG | - | chr4_3:6428264-6428283 | Msa0626630:intron | 40.0% |
| CCTTCACAAAATGCCTATAG+TGG | + | chr4_3:6428310-6428329 | None:intergenic | 40.0% | |
| ! | CCACTATAGGCATTTTGTGA+AGG | - | chr4_3:6428307-6428326 | Msa0626630:intron | 40.0% |
| ! | CTATAGGCATTTTGTGAAGG+GGG | - | chr4_3:6428310-6428329 | Msa0626630:intron | 40.0% |
| GTCATATAAACACACCACTG+CGG | + | chr4_3:6428336-6428355 | None:intergenic | 40.0% | |
| GCAGTGGTGTGTTTATATGA+CGG | - | chr4_3:6428335-6428354 | Msa0626630:intron | 40.0% | |
| CCAATGTTGTTAATGGCAGA+TGG | + | chr4_3:6428369-6428388 | None:intergenic | 40.0% | |
| CCATCTGCCATTAACAACAT+TGG | - | chr4_3:6428366-6428385 | Msa0626630:intron | 40.0% | |
| GGTGTGACCAATGTTGTTAA+TGG | + | chr4_3:6428376-6428395 | None:intergenic | 40.0% | |
| CCAATCATGATCGTGCATTA+TGG | + | chr4_3:6428437-6428456 | None:intergenic | 40.0% | |
| CCATAATGCACGATCATGAT+TGG | - | chr4_3:6428434-6428453 | Msa0626630:intron | 40.0% | |
| TGTTGAAATTTAGCCGTTCC+AGG | - | chr4_3:6428652-6428671 | Msa0626630:intron | 40.0% | |
| GTTGAAATTTAGCCGTTCCA+GGG | - | chr4_3:6428653-6428672 | Msa0626630:intron | 40.0% | |
| GAGATTGAGATGGTAGACAA+CGG | + | chr4_3:6428707-6428726 | None:intergenic | 40.0% | |
| TTGGTAGATTGGATGAAAGC+TGG | - | chr4_3:6429101-6429120 | Msa0626630:intron | 40.0% | |
| TGGTAGATTGGATGAAAGCT+GGG | - | chr4_3:6429102-6429121 | Msa0626630:intron | 40.0% | |
| GACTGACATGGCTTAATAGA+TGG | - | chr4_3:6429274-6429293 | Msa0626630:intron | 40.0% | |
| ATCAGTAGTTTAACATGGGG+TGG | - | chr4_3:6429419-6429438 | Msa0626630:intron | 40.0% | |
| CTATTCATTGCACACTAGGA+TGG | + | chr4_3:6429635-6429654 | None:intergenic | 40.0% | |
| TGACTGGGAGTAATTAAGGA+CGG | + | chr4_3:6429687-6429706 | None:intergenic | 40.0% | |
| GCAATCTTTCCTCTTTGACT+GGG | + | chr4_3:6429702-6429721 | None:intergenic | 40.0% | |
| AGCAATCTTTCCTCTTTGAC+TGG | + | chr4_3:6429703-6429722 | None:intergenic | 40.0% | |
| GAAAGATTGCTACATAGCTC+CGG | - | chr4_3:6429712-6429731 | Msa0626630:CDS | 40.0% | |
| !! | TGCTTTAGGATGTGCATTCT+CGG | - | chr4_3:6429781-6429800 | Msa0626630:CDS | 40.0% |
| TATACTTATAAAGCCCGGAC+TGG | - | chr4_3:6429921-6429940 | Msa0626630:CDS | 40.0% | |
| ATTGACTAAGCTGCTTGAAC+TGG | + | chr4_3:6430046-6430065 | None:intergenic | 40.0% | |
| AGTTCAAGCAGCTTAGTCAA+TGG | - | chr4_3:6430045-6430064 | Msa0626630:CDS | 40.0% | |
| TGGTGGAGAAAGAGAAAGAG+GGG | + | chr4_3:6425305-6425324 | None:intergenic | 45.0% | |
| ! | GTGGTGGAGAAAGAGAAAGA+GGG | + | chr4_3:6425306-6425325 | None:intergenic | 45.0% |
| !! | AGAGTAGGGTTTGGGTTTTG+TGG | + | chr4_3:6425362-6425381 | None:intergenic | 45.0% |
| TGTAAGGATTCGGAGAAGGA+GGG | + | chr4_3:6425448-6425467 | None:intergenic | 45.0% | |
| TTGTAAGGATTCGGAGAAGG+AGG | + | chr4_3:6425449-6425468 | None:intergenic | 45.0% | |
| !! | GAAGGTGTTGTGTTTGACGT+TGG | + | chr4_3:6425499-6425518 | None:intergenic | 45.0% |
| !!! | TGGTTTTGGAACGGAAGCTT+TGG | + | chr4_3:6425576-6425595 | None:intergenic | 45.0% |
| TAGATCATCGGAATCAGGTG+CGG | + | chr4_3:6425599-6425618 | None:intergenic | 45.0% | |
| GAAGAAGCCAATCTCGTTTC+AGG | - | chr4_3:6425627-6425646 | Msa0626630:exon | 45.0% | |
| TCGATCCAAAGATTCCGCTT+CGG | - | chr4_3:6425672-6425691 | Msa0626630:CDS | 45.0% | |
| ! | AGTTTTCGACGTATCCGAAG+CGG | + | chr4_3:6425689-6425708 | None:intergenic | 45.0% |
| AAATTCGACGAATCAGACGC+CGG | - | chr4_3:6425771-6425790 | Msa0626630:CDS | 45.0% | |
| CTATTCCCCGCTGACATATT+CGG | + | chr4_3:6425814-6425833 | None:intergenic | 45.0% | |
| AATATGTCAGCGGGGAATAG+TGG | - | chr4_3:6425814-6425833 | Msa0626630:intron | 45.0% | |
| ATATGTCAGCGGGGAATAGT+GGG | - | chr4_3:6425815-6425834 | Msa0626630:intron | 45.0% | |
| !! | TAGTGGGACGAGTTTGTTAC+CGG | - | chr4_3:6425831-6425850 | Msa0626630:intron | 45.0% |
| TCCTTCCCAAACATCGAATC+CGG | + | chr4_3:6425853-6425872 | None:intergenic | 45.0% | |
| CGATGTTTGGGAAGGAGATA+AGG | - | chr4_3:6425857-6425876 | Msa0626630:intron | 45.0% | |
| TTGGGAAGGAGATAAGGGAT+AGG | - | chr4_3:6425863-6425882 | Msa0626630:intron | 45.0% | |
| ! | GATAAGGGATAGGTTAGCCA+AGG | - | chr4_3:6425873-6425892 | Msa0626630:intron | 45.0% |
| ACTCCCTGAATCATTCACCT+TGG | + | chr4_3:6425893-6425912 | None:intergenic | 45.0% | |
| !! | CAGGGAGTTTTGGTACTGTT+AGG | - | chr4_3:6425905-6425924 | Msa0626630:intron | 45.0% |
| CTTCAACCTCTCACTCAACT+CGG | + | chr4_3:6426010-6426029 | None:intergenic | 45.0% | |
| GTGAGAGGTTGAAGAAAGTG+AGG | - | chr4_3:6426016-6426035 | Msa0626630:intron | 45.0% | |
| ATAAAGCTCTTGCCAAGTGG+AGG | - | chr4_3:6426889-6426908 | Msa0626630:intron | 45.0% | |
| TAAAGCTCTTGCCAAGTGGA+GGG | - | chr4_3:6426890-6426909 | Msa0626630:intron | 45.0% | |
| AGGGTTGTGGTCATGTTGTA+AGG | - | chr4_3:6426909-6426928 | Msa0626630:intron | 45.0% | |
| GATATGTTGTCCCTGATTGG+TGG | - | chr4_3:6426996-6427015 | Msa0626630:intron | 45.0% | |
| AACGTCAAAGTCAAAGCCTG+TGG | - | chr4_3:6427173-6427192 | Msa0626630:intron | 45.0% | |
| CGGCCTACAACTCTCAATTA+CGG | + | chr4_3:6427409-6427428 | None:intergenic | 45.0% | |
| TGAATTAACCTCGTGGTGTC+TGG | - | chr4_3:6427439-6427458 | Msa0626630:intron | 45.0% | |
| TGCTTCACATGTCGATGGAT+AGG | - | chr4_3:6427469-6427488 | Msa0626630:intron | 45.0% | |
| CAGCAGAGGACATGTTATCT+GGG | + | chr4_3:6427572-6427591 | None:intergenic | 45.0% | |
| TCAGCAGAGGACATGTTATC+TGG | + | chr4_3:6427573-6427592 | None:intergenic | 45.0% | |
| AAGATGTCCGAGTCAGATTG+TGG | - | chr4_3:6427633-6427652 | Msa0626630:intron | 45.0% | |
| TCTGCTCGTGTTCAAGGTAA+AGG | - | chr4_3:6427657-6427676 | Msa0626630:intron | 45.0% | |
| GGTTATGATGACTCGCCATA+CGG | + | chr4_3:6428246-6428265 | None:intergenic | 45.0% | |
| AAAAGCTTCCGAGGAATGCT+AGG | - | chr4_3:6428521-6428540 | Msa0626630:intron | 45.0% | |
| AAAGCTTCCGAGGAATGCTA+GGG | - | chr4_3:6428522-6428541 | Msa0626630:intron | 45.0% | |
| TGTATGACCCTAGCATTCCT+CGG | + | chr4_3:6428532-6428551 | None:intergenic | 45.0% | |
| AACTTACAGGGCCAGTTAAC+TGG | + | chr4_3:6428614-6428633 | None:intergenic | 45.0% | |
| AGATGGTAGACAACGGAAAG+CGG | + | chr4_3:6428700-6428719 | None:intergenic | 45.0% | |
| ! | GTTTATGTAGCAAGCTCTGG+TGG | - | chr4_3:6428779-6428798 | Msa0626630:intron | 45.0% |
| GGTAGATTGGATGAAAGCTG+GGG | - | chr4_3:6429103-6429122 | Msa0626630:intron | 45.0% | |
| ! | TTGCAAGAGCAGGACAGTTT+TGG | - | chr4_3:6429166-6429185 | Msa0626630:intron | 45.0% |
| CTGGAGATGGTGAGTATAGA+AGG | - | chr4_3:6429195-6429214 | Msa0626630:intron | 45.0% | |
| AGGGCTATTCATTGCACACT+AGG | + | chr4_3:6429639-6429658 | None:intergenic | 45.0% | |
| TAGGATGTGCATTCTCGGAA+AGG | - | chr4_3:6429786-6429805 | Msa0626630:CDS | 45.0% | |
| TCGGAAAGGTCTGATAGCAA+TGG | - | chr4_3:6429800-6429819 | Msa0626630:CDS | 45.0% | |
| AATACCTCAGAAGAACCGAC+TGG | - | chr4_3:6429847-6429866 | Msa0626630:CDS | 45.0% | |
| ATACCTCAGAAGAACCGACT+GGG | - | chr4_3:6429848-6429867 | Msa0626630:CDS | 45.0% | |
| !! | TAAAGCCCGGACTGGTAAAT+CGG | - | chr4_3:6429929-6429948 | Msa0626630:CDS | 45.0% |
| AGCAACACATTCTTCAGCCA+TGG | + | chr4_3:6430110-6430129 | None:intergenic | 45.0% | |
| !! | GGTGGTGGAGAAAGAGAAAG+AGG | + | chr4_3:6425307-6425326 | None:intergenic | 50.0% |
| TTCTCCACCACCACCAACAA+TGG | - | chr4_3:6425315-6425334 | Msa0626630:three_prime_UTR | 50.0% | |
| !! | AGAAGAAGCGCCATTGTTGG+TGG | + | chr4_3:6425328-6425347 | None:intergenic | 50.0% |
| ! | AGTGGTGGAGAGTAGGGTTT+GGG | + | chr4_3:6425370-6425389 | None:intergenic | 50.0% |
| ! | TGATGGAGTGGTGGAGAGTA+GGG | + | chr4_3:6425376-6425395 | None:intergenic | 50.0% |
| TCCAACTCCGGTGACAATGA+CGG | - | chr4_3:6425409-6425428 | Msa0626630:three_prime_UTR | 50.0% | |
| ! | TTTTGTTGCGAGGGAGAGAG+AGG | + | chr4_3:6425523-6425542 | None:intergenic | 50.0% |
| CGTATCCGAAGCGGAATCTT+TGG | + | chr4_3:6425680-6425699 | None:intergenic | 50.0% | |
| ACGTCGAAAACTACCATCGG+TGG | - | chr4_3:6425697-6425716 | Msa0626630:CDS | 50.0% | |
| TCGAAAACTACCATCGGTGG+TGG | - | chr4_3:6425700-6425719 | Msa0626630:CDS | 50.0% | |
| ! | AAAACTACCATCGGTGGTGG+TGG | - | chr4_3:6425703-6425722 | Msa0626630:CDS | 50.0% |
| ! | AAACTACCATCGGTGGTGGT+GGG | - | chr4_3:6425704-6425723 | Msa0626630:CDS | 50.0% |
| GACATATTCGGTCTCCACCT+CGG | + | chr4_3:6425802-6425821 | None:intergenic | 50.0% | |
| GTGGAGACCGAATATGTCAG+CGG | - | chr4_3:6425804-6425823 | Msa0626630:intron | 50.0% | |
| TGGAGACCGAATATGTCAGC+GGG | - | chr4_3:6425805-6425824 | Msa0626630:intron | 50.0% | |
| ACCGGATTCGATGTTTGGGA+AGG | - | chr4_3:6425849-6425868 | Msa0626630:intron | 50.0% | |
| GCGTCGCTATTCGACAACAT+CGG | + | chr4_3:6426318-6426337 | None:intergenic | 50.0% | |
| GCTTGGAGTTCCACCAATCA+GGG | + | chr4_3:6427009-6427028 | None:intergenic | 50.0% | |
| AGCTTGGAGTTCCACCAATC+AGG | + | chr4_3:6427010-6427029 | None:intergenic | 50.0% | |
| ! | GGAGGCTTTGACAAGTAGCT+TGG | + | chr4_3:6427026-6427045 | None:intergenic | 50.0% |
| AGCAGAGCCACAATCTGACT+CGG | + | chr4_3:6427643-6427662 | None:intergenic | 50.0% | |
| TGATGACTCGCCATACGGTA+GGG | + | chr4_3:6428241-6428260 | None:intergenic | 50.0% | |
| ATGATGACTCGCCATACGGT+AGG | + | chr4_3:6428242-6428261 | None:intergenic | 50.0% | |
| GATGGTAGACAACGGAAAGC+GGG | + | chr4_3:6428699-6428718 | None:intergenic | 50.0% | |
| CCTGCTCTTGCAAGTTCTCT+TGG | + | chr4_3:6429159-6429178 | None:intergenic | 50.0% | |
| CCAAGAGAACTTGCAAGAGC+AGG | - | chr4_3:6429156-6429175 | Msa0626630:intron | 50.0% | |
| !! | CAAGAGCAGGACAGTTTTGG+TGG | - | chr4_3:6429169-6429188 | Msa0626630:intron | 50.0% |
| !! | AGGACAGTTTTGGTGGAGAC+TGG | - | chr4_3:6429176-6429195 | Msa0626630:intron | 50.0% |
| !! | GTTTTGGTGGAGACTGGAGA+TGG | - | chr4_3:6429182-6429201 | Msa0626630:intron | 50.0% |
| GGGGTGGACAATGTAATCTG+CGG | - | chr4_3:6429435-6429454 | Msa0626630:CDS | 50.0% | |
| ATTGCTACATAGCTCCGGTC+TGG | - | chr4_3:6429717-6429736 | Msa0626630:CDS | 50.0% | |
| ! | AATCCCAGTCGGTTCTTCTG+AGG | + | chr4_3:6429854-6429873 | None:intergenic | 50.0% |
| !! | AAAGCCCGGACTGGTAAATC+GGG | - | chr4_3:6429930-6429949 | Msa0626630:CDS | 50.0% |
| ! | GGCTAGTCAGACACTTAGAC+TGG | + | chr4_3:6430025-6430044 | None:intergenic | 50.0% |
| !! | AGAAGCGCCATTGTTGGTGG+TGG | + | chr4_3:6425325-6425344 | None:intergenic | 55.0% |
| !! | CGGAGAAGAAGCGCCATTGT+TGG | + | chr4_3:6425331-6425350 | None:intergenic | 55.0% |
| ! | GAGTGGTGGAGAGTAGGGTT+TGG | + | chr4_3:6425371-6425390 | None:intergenic | 55.0% |
| ! | GTGATGGAGTGGTGGAGAGT+AGG | + | chr4_3:6425377-6425396 | None:intergenic | 55.0% |
| !! | GAGAAGAGGTGATGGAGTGG+TGG | + | chr4_3:6425385-6425404 | None:intergenic | 55.0% |
| !! | GTGGAGAAGAGGTGATGGAG+TGG | + | chr4_3:6425388-6425407 | None:intergenic | 55.0% |
| TGGAGGTGGAGAAGAGGTGA+TGG | + | chr4_3:6425393-6425412 | None:intergenic | 55.0% | |
| CTCTTCTCCACCTCCAACTC+CGG | - | chr4_3:6425397-6425416 | Msa0626630:three_prime_UTR | 55.0% | |
| ATTGTCACCGGAGTTGGAGG+TGG | + | chr4_3:6425407-6425426 | None:intergenic | 55.0% | |
| GTCATTGTCACCGGAGTTGG+AGG | + | chr4_3:6425410-6425429 | None:intergenic | 55.0% | |
| ACCGTCATTGTCACCGGAGT+TGG | + | chr4_3:6425413-6425432 | None:intergenic | 55.0% | |
| AACTCCGGTGACAATGACGG+TGG | - | chr4_3:6425412-6425431 | Msa0626630:three_prime_UTR | 55.0% | |
| !!! | CAGGTGCGGTGGTTTTGGAA+CGG | + | chr4_3:6425585-6425604 | None:intergenic | 55.0% |
| ! | GGAATCAGGTGCGGTGGTTT+TGG | + | chr4_3:6425590-6425609 | None:intergenic | 55.0% |
| ATCATCGGAATCAGGTGCGG+TGG | + | chr4_3:6425596-6425615 | None:intergenic | 55.0% | |
| ! | AACTACCATCGGTGGTGGTG+GGG | - | chr4_3:6425705-6425724 | Msa0626630:CDS | 55.0% |
| GGAGACCGAATATGTCAGCG+GGG | - | chr4_3:6425806-6425825 | Msa0626630:intron | 55.0% | |
| ! | CGATTGCCGAGTTGAGTGAG+AGG | - | chr4_3:6426001-6426020 | Msa0626630:intron | 55.0% |
| GTGATGTCAATCGCGGATCG+CGG | + | chr4_3:6426781-6426800 | None:intergenic | 55.0% | |
| TCTTGCCAAGTGGAGGGTTG+TGG | - | chr4_3:6426896-6426915 | Msa0626630:intron | 55.0% | |
| CATGACCACAACCCTCCACT+TGG | + | chr4_3:6426904-6426923 | None:intergenic | 55.0% | |
| ! | TGTGGCTCTGCTCGTGTTCA+AGG | - | chr4_3:6427651-6427670 | Msa0626630:intron | 55.0% |
| GTGGAGATGAGACCCTGGAA+CGG | + | chr4_3:6428668-6428687 | None:intergenic | 55.0% | |
| GTCACCCGATTTACCAGTCC+GGG | + | chr4_3:6429937-6429956 | None:intergenic | 55.0% | |
| CGTCACCCGATTTACCAGTC+CGG | + | chr4_3:6429938-6429957 | None:intergenic | 55.0% | |
| !! | AGCGCCATTGTTGGTGGTGG+TGG | + | chr4_3:6425322-6425341 | None:intergenic | 60.0% |
| CGGAGTTGGAGGTGGAGAAG+AGG | + | chr4_3:6425399-6425418 | None:intergenic | 60.0% | |
| GTCGCCACCGTCATTGTCAC+CGG | + | chr4_3:6425419-6425438 | None:intergenic | 60.0% | |
| TGCGAGGGAGAGAGAGGAGA+AGG | + | chr4_3:6425517-6425536 | None:intergenic | 60.0% | |
| !! | ACTACCATCGGTGGTGGTGG+GGG | - | chr4_3:6425706-6425725 | Msa0626630:CDS | 60.0% |
| AATACCCCCACCACCACCGA+TGG | + | chr4_3:6425713-6425732 | None:intergenic | 60.0% | |
| !! | ATCGGTGGTGGTGGGGGTAT+TGG | - | chr4_3:6425712-6425731 | Msa0626630:CDS | 60.0% |
| ! | TTTTGTGAAGGGGGCCGCAG+TGG | - | chr4_3:6428319-6428338 | Msa0626630:intron | 60.0% |
| GTGTCGTGGAGATGAGACCC+TGG | + | chr4_3:6428673-6428692 | None:intergenic | 60.0% | |
| ATCAGACGCCGGTGACGCCG+AGG | - | chr4_3:6425782-6425801 | Msa0626630:CDS | 70.0% | |
| GGTCTCCACCTCGGCGTCAC+CGG | + | chr4_3:6425793-6425812 | None:intergenic | 70.0% | |
| ! | CGGAAAGCGGGCTCGTGTCG+TGG | + | chr4_3:6428687-6428706 | None:intergenic | 70.0% |
| AGACGCCGGTGACGCCGAGG+TGG | - | chr4_3:6425785-6425804 | Msa0626630:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 6425262 | 6430337 | 6425262 | ID=Msa0626630;Name=Msa0626630 |
| chr4_3 | mRNA | 6425262 | 6430337 | 6425262 | ID=Msa0626630-mRNA-1;Parent=Msa0626630;Name=Msa0626630-mRNA-1;_AED=0.04;_eAED=0.04;_QI=72|0.6|0.66|0.83|0.6|0.66|6|369|444 |
| chr4_3 | exon | 6425262 | 6425810 | 6425262 | ID=Msa0626630-mRNA-1:exon:1867;Parent=Msa0626630-mRNA-1 |
| chr4_3 | exon | 6427694 | 6427746 | 6427694 | ID=Msa0626630-mRNA-1:exon:1866;Parent=Msa0626630-mRNA-1 |
| chr4_3 | exon | 6427927 | 6428038 | 6427927 | ID=Msa0626630-mRNA-1:exon:1865;Parent=Msa0626630-mRNA-1 |
| chr4_3 | exon | 6428192 | 6428258 | 6428192 | ID=Msa0626630-mRNA-1:exon:1864;Parent=Msa0626630-mRNA-1 |
| chr4_3 | exon | 6428524 | 6428614 | 6428524 | ID=Msa0626630-mRNA-1:exon:1863;Parent=Msa0626630-mRNA-1 |
| chr4_3 | exon | 6429434 | 6430337 | 6429434 | ID=Msa0626630-mRNA-1:exon:1862;Parent=Msa0626630-mRNA-1 |
| chr4_3 | five_prime_UTR | 6430266 | 6430337 | 6430266 | ID=Msa0626630-mRNA-1:five_prime_utr;Parent=Msa0626630-mRNA-1 |
| chr4_3 | CDS | 6429434 | 6430265 | 6429434 | ID=Msa0626630-mRNA-1:cds;Parent=Msa0626630-mRNA-1 |
| chr4_3 | CDS | 6428524 | 6428614 | 6428524 | ID=Msa0626630-mRNA-1:cds;Parent=Msa0626630-mRNA-1 |
| chr4_3 | CDS | 6428192 | 6428258 | 6428192 | ID=Msa0626630-mRNA-1:cds;Parent=Msa0626630-mRNA-1 |
| chr4_3 | CDS | 6427927 | 6428038 | 6427927 | ID=Msa0626630-mRNA-1:cds;Parent=Msa0626630-mRNA-1 |
| chr4_3 | CDS | 6427694 | 6427746 | 6427694 | ID=Msa0626630-mRNA-1:cds;Parent=Msa0626630-mRNA-1 |
| chr4_3 | CDS | 6425631 | 6425810 | 6425631 | ID=Msa0626630-mRNA-1:cds;Parent=Msa0626630-mRNA-1 |
| chr4_3 | three_prime_UTR | 6425262 | 6425630 | 6425262 | ID=Msa0626630-mRNA-1:three_prime_utr;Parent=Msa0626630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
