AlfalfaGEDB | Msa1433870

M. sativa cultivar zhongmu-4 / Msa1433870

KEGG: -
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0012505 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0097708
PFAM: PF00071.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1433870	XP_013465182.1	99.535	215	1	0	1	215	1	215	6.10e-155	438

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1433870	sp\|Q40521\|RB11B_TOBAC	81.429	210	39	0	5	214	8	217	3.23e-127	360

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1433870	G7ZUL4	99.535	215	1	0	1	215	1	215	2.91e-155	438

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0017730	Msa1433870	0.810418	1.164393e-50	-8.615850e-47
Msa0110400	Msa1433870	0.805216	1.485975e-49	-8.615850e-47
Msa1373170	Msa1433870	0.800185	1.622979e-48	-8.615850e-47
Msa1381260	Msa1433870	0.808682	2.746445e-50	-8.615850e-47
Msa1391480	Msa1433870	0.814518	1.479179e-51	-8.615850e-47
Msa1398790	Msa1433870	0.806905	6.553556e-50	-8.615850e-47
Msa0611640	Msa1433870	0.804243	2.371809e-49	-8.615850e-47
Msa0630770	Msa1433870	-0.800258	1.568152e-48	-8.615850e-47
Msa0662890	Msa1433870	0.802844	4.626938e-49	-8.615850e-47
Msa0693330	Msa1433870	0.806664	7.368766e-50	-8.615850e-47
Msa0140770	Msa1433870	-0.811883	5.601184e-51	-8.615850e-47
Msa0142410	Msa1433870	0.814787	1.289350e-51	-8.615850e-47
Msa0199420	Msa1433870	0.805119	1.556652e-49	-8.615850e-47
Msa0209140	Msa1433870	0.872861	2.296997e-67	-8.615850e-47
Msa0216340	Msa1433870	0.807719	4.406544e-50	-8.615850e-47
Msa0220990	Msa1433870	0.855465	6.196283e-62	-8.615850e-47
Msa1257570	Msa1433870	0.826634	2.435834e-54	-8.615850e-47
Msa1259730	Msa1433870	0.815627	8.390608e-52	-8.615850e-47
Msa1265020	Msa1433870	0.805479	1.308752e-49	-8.615850e-47
Msa1292020	Msa1433870	0.801215	1.000046e-48	-8.615850e-47
Msa1327870	Msa1433870	0.826931	2.068563e-54	-8.615850e-47
Msa1331300	Msa1433870	0.813153	2.955999e-51	-8.615850e-47
Msa1337850	Msa1433870	0.809752	1.620021e-50	-8.615850e-47
Msa0385830	Msa1433870	0.815464	9.122537e-52	-8.615850e-47
Msa0428210	Msa1433870	0.805908	1.063819e-49	-8.615850e-47
Msa0474570	Msa1433870	0.813127	2.995931e-51	-8.615850e-47
Msa0479760	Msa1433870	-0.810406	1.171000e-50	-8.615850e-47
Msa1078890	Msa1433870	0.810676	1.024142e-50	-8.615850e-47
Msa0241830	Msa1433870	0.802037	6.782866e-49	-8.615850e-47
Msa0262440	Msa1433870	0.926376	5.107651e-91	-8.615850e-47
Msa0300280	Msa1433870	0.988332	1.324973e-173	-8.615850e-47
Msa0326710	Msa1433870	0.814218	1.722865e-51	-8.615850e-47
Msa0341060	Msa1433870	-0.804671	1.931581e-49	-8.615850e-47
Msa1123350	Msa1433870	0.807211	5.645475e-50	-8.615850e-47
Msa1165090	Msa1433870	0.810507	1.113550e-50	-8.615850e-47
Msa0519150	Msa1433870	0.852499	4.434100e-61	-8.615850e-47
Msa0523430	Msa1433870	-0.802661	5.046629e-49	-8.615850e-47
Msa0959520	Msa1433870	0.837277	5.715663e-57	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1433870	MtrunA17_Chr2g0325091	99.535	215	1	0	1	215	1	215	5.61e-159	438
Msa1433870	MtrunA17_Chr4g0046261	81.019	216	38	2	1	213	1	216	1.10e-128	361
Msa1433870	MtrunA17_Chr2g0283131	80.556	216	39	2	1	213	1	216	1.79e-128	361
Msa1433870	MtrunA17_Chr4g0040781	81.019	216	38	2	1	213	1	216	2.83e-128	360
Msa1433870	MtrunA17_Chr2g0315551	76.415	212	47	3	5	214	7	217	5.20e-118	334
Msa1433870	MtrunA17_Chr2g0319951	72.170	212	55	2	5	213	7	217	7.18e-108	308
Msa1433870	MtrunA17_Chr3g0112681	67.453	212	66	2	4	213	5	215	2.83e-102	294
Msa1433870	MtrunA17_Chr2g0276941	66.038	212	69	1	5	213	9	220	1.77e-101	293
Msa1433870	MtrunA17_Chr4g0032201	67.136	213	66	3	4	214	5	215	6.00e-101	291
Msa1433870	MtrunA17_Chr1g0174281	58.065	217	85	2	2	212	6	222	2.28e-89	262
Msa1433870	MtrunA17_Chr6g0482721	58.768	211	84	3	5	213	6	215	1.72e-87	257
Msa1433870	MtrunA17_Chr3g0123821	55.814	215	91	1	2	212	7	221	4.12e-86	254
Msa1433870	MtrunA17_Chr8g0381841	56.881	218	89	2	2	214	8	225	1.42e-85	252
Msa1433870	MtrunA17_Chr7g0231131	55.814	215	90	2	2	212	6	219	2.20e-85	252
Msa1433870	MtrunA17_Chr8g0346421	55.140	214	93	1	4	214	19	232	6.56e-81	241
Msa1433870	MtrunA17_Chr7g0275991	56.338	213	88	3	6	213	15	227	7.73e-81	241
Msa1433870	MtrunA17_Chr8g0392931	56.604	212	88	2	5	213	8	218	1.70e-79	237
Msa1433870	MtrunA17_Chr7g0214241	58.937	207	82	2	10	213	14	220	4.80e-79	236
Msa1433870	MtrunA17_Chr1g0189361	55.189	212	88	2	9	213	12	223	6.90e-77	230
Msa1433870	MtrunA17_Chr8g0351861	60.221	181	71	1	2	181	6	186	1.88e-75	227
Msa1433870	MtrunA17_Chr7g0234201	56.373	204	89	0	10	213	12	215	5.51e-75	225
Msa1433870	MtrunA17_Chr2g0290891	46.009	213	104	2	8	213	3	211	1.56e-61	191
Msa1433870	MtrunA17_Chr6g0458081	43.868	212	110	2	8	213	3	211	1.83e-58	183
Msa1433870	MtrunA17_Chr4g0055651	45.498	211	106	1	4	214	1	202	3.16e-58	182
Msa1433870	MtrunA17_Chr7g0250531	45.498	211	106	1	4	214	1	202	5.13e-57	179
Msa1433870	MtrunA17_Chr8g0335471	46.919	211	104	2	4	214	1	203	5.77e-57	179
Msa1433870	MtrunA17_Chr8g0349711	46.154	208	108	2	10	213	5	212	1.47e-54	173
Msa1433870	MtrunA17_Chr2g0276931	44.928	207	104	2	7	212	5	202	3.94e-54	172
Msa1433870	MtrunA17_Chr8g0349681	46.698	212	99	3	8	213	381	584	7.09e-52	176
Msa1433870	MtrunA17_Chr8g0349681	46.988	166	88	0	8	173	172	337	7.78e-46	159
Msa1433870	MtrunA17_Chr8g0349681	50.641	156	77	0	10	165	12	167	9.95e-46	159
Msa1433870	MtrunA17_Chr4g0030911	43.602	211	106	4	7	212	11	213	9.06e-52	166
Msa1433870	MtrunA17_Chr1g0182301	42.453	212	112	3	7	214	11	216	1.06e-51	166
Msa1433870	MtrunA17_Chr7g0263071	42.991	214	108	4	7	214	11	216	1.90e-51	165
Msa1433870	MtrunA17_Chr1g0212521	42.308	208	114	3	7	212	11	214	5.41e-51	164
Msa1433870	MtrunA17_Chr1g0182321	41.981	212	113	3	7	214	11	216	5.70e-51	164
Msa1433870	MtrunA17_Chr8g0384311	46.190	210	101	7	6	212	8	208	1.98e-49	160
Msa1433870	MtrunA17_Chr2g0327911	40.826	218	109	5	3	212	7	212	6.91e-48	156
Msa1433870	MtrunA17_Chr1g0159481	45.455	209	105	6	7	213	13	214	8.44e-48	156
Msa1433870	MtrunA17_Chr1g0199331	44.720	161	88	1	13	172	33	193	1.86e-45	149
Msa1433870	MtrunA17_Chr3g0130271	43.981	216	104	8	3	212	4	208	3.20e-45	149
Msa1433870	MtrunA17_Chr3g0109721	43.125	160	91	0	13	172	12	171	7.41e-45	148
Msa1433870	MtrunA17_Chr5g0433561	42.500	160	92	0	13	172	12	171	1.49e-43	145
Msa1433870	MtrunA17_Chr7g0265001	42.788	208	111	4	8	213	13	214	9.04e-43	143
Msa1433870	MtrunA17_Chr1g0197331	42.453	212	111	5	5	213	9	212	7.74e-42	140
Msa1433870	MtrunA17_Chr1g0180291	43.478	207	108	5	8	212	11	210	9.86e-42	140
Msa1433870	MtrunA17_Chr3g0123971	33.333	195	112	1	12	206	10	186	7.78e-39	133
Msa1433870	MtrunA17_Chr8g0390561	39.375	160	97	0	13	172	11	170	1.37e-38	132
Msa1433870	MtrunA17_Chr4g0055081	33.178	214	113	3	12	213	10	205	1.52e-38	132
Msa1433870	MtrunA17_Chr5g0400131	34.694	196	109	2	12	206	10	187	3.66e-38	131
Msa1433870	MtrunA17_Chr8g0382221	35.057	174	113	0	12	185	10	183	5.22e-38	130
Msa1433870	MtrunA17_Chr6g0466301	40.000	165	92	3	11	168	8	172	2.50e-37	129
Msa1433870	MtrunA17_Chr6g0465491	40.000	165	92	3	11	168	8	172	2.50e-37	129
Msa1433870	MtrunA17_Chr1g0201121	40.964	166	89	4	11	168	8	172	4.65e-36	125
Msa1433870	MtrunA17_Chr8g0383261	39.759	166	91	4	11	168	12	176	3.74e-35	123
Msa1433870	MtrunA17_Chr4g0034871	34.928	209	116	7	11	211	8	204	2.01e-34	121
Msa1433870	MtrunA17_Chr2g0331691	39.286	168	94	4	11	171	10	176	2.79e-34	121
Msa1433870	MtrunA17_Chr4g0004661	39.506	162	91	3	11	165	64	225	1.44e-32	118
Msa1433870	MtrunA17_Chr6g0466161	36.667	150	88	3	26	168	5	154	1.11e-24	96.7
Msa1433870	MtrunA17_Chr6g0465471	36.667	150	88	3	26	168	5	154	1.12e-24	96.7
Msa1433870	MtrunA17_Chr3g0138121	32.258	155	102	2	12	166	14	165	8.87e-24	94.4
Msa1433870	MtrunA17_Chr3g0138111	32.258	155	102	2	12	166	14	165	1.07e-23	94.4
Msa1433870	MtrunA17_Chr3g0138101	32.258	155	102	2	12	166	14	165	1.08e-23	94.4
Msa1433870	MtrunA17_Chr4g0046211	37.500	120	72	3	11	129	6	123	4.38e-17	75.1
Msa1433870	MtrunA17_Chr4g0037021	31.282	195	115	7	11	190	6	196	4.97e-17	75.9
Msa1433870	MtrunA17_Chr5g0405791	37.500	120	72	3	11	129	6	123	5.24e-17	75.9
Msa1433870	MtrunA17_Chr2g0325101	37.500	120	72	3	11	129	6	123	1.17e-16	75.1
Msa1433870	MtrunA17_Chr6g0466431	35.354	99	55	1	11	109	8	97	1.84e-16	72.0
Msa1433870	MtrunA17_Chr6g0465611	35.354	99	55	1	11	109	8	97	1.84e-16	72.0
Msa1433870	MtrunA17_Chr8g0371501	37.500	120	72	3	11	129	6	123	1.91e-16	74.3
Msa1433870	MtrunA17_Chr3g0117931	31.138	167	101	5	11	165	8	172	3.29e-16	74.3
Msa1433870	MtrunA17_Chr6g0486041	36.364	121	74	3	11	130	6	124	8.01e-16	73.2
Msa1433870	MtrunA17_Chr1g0182951	69.048	42	13	0	120	161	1	42	8.68e-14	63.5
Msa1433870	MtrunA17_Chr1g0178291	31.737	167	101	5	8	171	428	584	2.37e-13	68.2
Msa1433870	MtrunA17_Chr5g0443631	24.852	169	121	2	12	175	105	272	1.20e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1433870	AT5G60860.1	81.429	210	38	1	5	213	7	216	8.61e-127	357
Msa1433870	AT3G15060.1	78.199	211	45	1	5	214	7	217	4.91e-123	347
Msa1433870	AT4G18430.1	76.852	216	47	2	1	213	1	216	3.38e-122	345
Msa1433870	AT1G28550.1	76.498	217	47	3	1	213	1	217	7.46e-122	344
Msa1433870	AT2G33870.1	76.415	212	48	2	5	214	7	218	1.02e-119	339
Msa1433870	AT5G45750.1	77.619	210	45	2	5	213	7	215	1.30e-118	336
Msa1433870	AT4G18800.1	77.143	210	44	2	5	213	7	213	5.30e-117	332
Msa1433870	AT1G16920.1	73.460	211	54	2	4	213	6	215	8.28e-113	322
Msa1433870	AT1G06400.1	73.333	210	54	2	5	213	7	215	8.47e-113	322
Msa1433870	AT1G09630.1	65.728	213	70	2	5	215	6	217	1.20e-103	298
Msa1433870	AT1G07410.1	64.623	212	72	2	4	214	5	214	2.47e-100	290
Msa1433870	AT5G59150.1	64.186	215	71	3	4	214	5	217	9.70e-96	278
Msa1433870	AT3G46830.1	63.721	215	72	3	4	214	5	217	1.42e-95	278
Msa1433870	AT3G46830.2	63.721	215	72	3	4	214	5	217	1.42e-95	278
Msa1433870	AT5G47960.1	58.796	216	83	3	5	215	9	223	7.34e-88	258
Msa1433870	AT3G12160.1	57.209	215	87	2	2	212	6	219	1.53e-87	258
Msa1433870	AT4G39990.1	57.143	210	87	1	9	215	15	224	6.81e-85	251
Msa1433870	AT5G65270.1	55.708	219	91	2	2	214	8	226	1.69e-84	250
Msa1433870	AT5G47520.1	56.542	214	89	1	5	214	8	221	4.11e-82	244
Msa1433870	AT1G18200.1	53.812	223	86	3	5	212	7	227	6.47e-80	239
Msa1433870	AT1G05810.1	58.373	209	83	2	9	214	10	217	1.54e-78	234
Msa1433870	AT1G73640.1	55.556	207	85	2	5	204	7	213	3.92e-78	234
Msa1433870	AT1G05810.2	58.373	209	83	2	9	214	56	263	4.11e-78	235
Msa1433870	AT3G07410.1	57.407	216	89	2	1	213	1	216	5.05e-78	233
Msa1433870	AT2G31680.1	55.714	210	90	1	9	215	10	219	7.49e-78	233
Msa1433870	AT2G43130.1	58.173	208	80	2	9	213	10	213	8.54e-78	233
Msa1433870	AT1G01200.1	55.093	216	91	4	4	213	21	236	2.92e-77	232
Msa1433870	AT5G59150.2	58.434	166	63	3	53	214	3	166	5.75e-63	193
Msa1433870	AT4G17170.1	46.009	213	104	2	8	213	3	211	1.21e-61	191
Msa1433870	AT4G35860.1	44.976	209	112	1	8	213	3	211	2.23e-59	186
Msa1433870	AT4G17160.1	45.411	207	106	2	8	212	3	204	5.23e-58	182
Msa1433870	AT1G02130.1	46.445	211	105	3	4	214	1	203	9.90e-57	179
Msa1433870	AT4G17530.1	46.445	211	104	3	4	214	1	202	2.16e-55	175
Msa1433870	AT5G47200.1	45.116	215	101	3	4	214	1	202	4.37e-55	174
Msa1433870	AT3G11730.1	44.712	208	105	3	7	212	4	203	1.61e-53	171
Msa1433870	AT5G03520.1	45.755	212	102	4	7	213	11	214	6.93e-53	169
Msa1433870	AT3G46060.2	43.458	214	107	4	7	214	11	216	4.43e-51	165
Msa1433870	AT3G46060.3	43.458	214	107	4	7	214	11	216	4.43e-51	165
Msa1433870	AT3G46060.1	43.458	214	107	4	7	214	11	216	4.43e-51	165
Msa1433870	AT3G53610.2	42.523	214	109	4	7	214	11	216	1.21e-50	164
Msa1433870	AT3G53610.3	42.523	214	109	4	7	214	11	216	1.21e-50	164
Msa1433870	AT3G53610.1	42.523	214	109	4	7	214	11	216	1.21e-50	164
Msa1433870	AT3G09900.1	43.925	214	105	4	7	213	11	216	1.29e-50	164
Msa1433870	AT5G59840.1	42.523	214	109	4	7	214	11	216	5.14e-50	162
Msa1433870	AT5G45130.1	40.299	201	108	4	13	213	12	200	5.63e-47	154
Msa1433870	AT1G43890.3	47.701	174	88	3	6	177	8	180	4.53e-46	152
Msa1433870	AT1G43890.1	47.701	174	88	3	6	177	8	180	4.53e-46	152
Msa1433870	AT1G43890.2	47.701	174	88	3	6	177	8	180	4.53e-46	152
Msa1433870	AT3G54840.1	47.134	157	82	1	13	168	35	191	6.28e-46	151
Msa1433870	AT3G54840.3	46.795	156	82	1	14	168	2	157	1.71e-45	149
Msa1433870	AT5G45130.2	39.698	199	108	4	15	213	22	208	2.60e-45	150
Msa1433870	AT3G54840.2	47.403	154	80	1	13	165	35	188	3.66e-45	149
Msa1433870	AT4G19640.1	42.331	163	94	0	13	175	12	174	4.25e-45	149
Msa1433870	AT5G03530.2	44.231	208	107	5	8	213	10	210	2.50e-44	147
Msa1433870	AT5G03530.1	44.231	208	107	5	8	213	10	210	2.50e-44	147
Msa1433870	AT4G35860.2	41.463	164	93	1	53	213	2	165	2.00e-40	136
Msa1433870	AT5G64990.1	37.267	161	101	0	12	172	8	168	2.54e-38	132
Msa1433870	AT2G44610.1	33.333	216	112	3	12	213	10	207	5.78e-38	131
Msa1433870	AT2G22290.1	33.168	202	130	2	12	213	10	206	5.81e-38	131
Msa1433870	AT1G22740.1	42.515	167	85	5	11	168	8	172	9.83e-38	130
Msa1433870	AT5G03520.2	42.197	173	87	4	46	213	40	204	1.73e-37	130
Msa1433870	AT5G10260.1	36.943	157	99	0	12	168	10	166	1.01e-36	128
Msa1433870	AT4G39890.1	36.364	165	104	1	12	175	10	174	1.36e-36	127
Msa1433870	AT4G09720.1	39.394	165	93	3	11	168	8	172	8.91e-36	125
Msa1433870	AT5G64990.2	35.714	168	101	1	12	172	8	175	1.25e-35	125
Msa1433870	AT3G09910.3	42.781	187	100	4	8	192	10	191	3.47e-35	124
Msa1433870	AT3G09910.1	42.781	187	100	4	8	192	10	191	3.47e-35	124
Msa1433870	AT3G09910.2	42.781	187	100	4	8	192	10	191	3.47e-35	124
Msa1433870	AT4G19640.2	43.077	130	74	0	13	142	12	141	3.70e-35	122
Msa1433870	AT5G46025.1	58.491	106	43	1	73	177	6	111	3.86e-35	120
Msa1433870	AT2G21880.1	40.000	165	92	3	11	168	9	173	4.32e-35	124
Msa1433870	AT1G52280.1	40.237	169	91	5	11	171	8	174	1.02e-34	122
Msa1433870	AT4G19640.3	42.748	131	75	0	13	143	12	142	1.12e-34	122
Msa1433870	AT4G09720.4	38.824	170	92	4	11	168	8	177	3.34e-34	121
Msa1433870	AT3G18820.1	39.506	162	91	3	11	165	8	169	1.42e-33	119
Msa1433870	AT3G09910.5	43.114	167	92	3	8	172	10	175	1.88e-33	119
Msa1433870	AT3G09910.4	43.114	167	92	3	8	172	10	175	1.88e-33	119
Msa1433870	AT4G09720.3	37.500	176	92	4	11	168	8	183	3.56e-33	119
Msa1433870	AT3G16100.1	39.264	163	90	4	11	165	8	169	6.45e-33	118
Msa1433870	AT1G49300.2	37.725	167	97	3	11	170	8	174	1.97e-32	117
Msa1433870	AT1G49300.1	37.725	167	97	3	11	170	8	174	1.97e-32	117
Msa1433870	AT5G39620.1	38.415	164	94	3	12	168	6	169	3.40e-32	116
Msa1433870	AT2G21880.4	37.838	148	85	3	28	168	1	148	2.43e-26	100
Msa1433870	AT2G21880.3	37.838	148	85	3	28	168	1	148	2.43e-26	100
Msa1433870	AT4G09720.6	39.130	138	77	3	38	168	1	138	2.55e-25	97.4
Msa1433870	AT4G09720.5	39.130	138	77	3	38	168	1	138	2.55e-25	97.4
Msa1433870	AT4G09720.2	39.130	138	77	3	38	168	1	138	2.55e-25	97.4
Msa1433870	AT2G21880.2	35.152	165	92	4	11	168	9	165	3.71e-25	98.2
Msa1433870	AT5G20020.1	32.258	155	102	2	12	166	14	165	1.30e-23	94.4
Msa1433870	AT5G55190.1	32.258	155	102	2	12	166	14	165	1.46e-23	94.4
Msa1433870	AT5G20010.1	32.258	155	102	2	12	166	14	165	1.54e-23	94.4
Msa1433870	AT5G55080.1	30.435	161	109	2	12	172	14	171	2.76e-23	93.6
Msa1433870	AT2G44690.1	32.222	180	108	5	11	178	18	195	2.40e-19	82.8
Msa1433870	AT4G08190.1	50.704	71	32	1	95	165	60	127	6.70e-18	77.0
Msa1433870	AT4G35020.1	34.667	150	88	4	11	159	6	146	2.75e-17	77.0
Msa1433870	AT4G35020.2	34.667	150	88	4	11	159	6	146	2.75e-17	77.0
Msa1433870	AT4G35020.3	34.667	150	88	4	11	159	6	146	2.75e-17	77.0
Msa1433870	AT1G75840.1	37.500	120	72	3	11	129	6	123	1.78e-16	75.1
Msa1433870	AT1G20090.1	36.667	120	73	3	11	129	5	122	2.94e-16	74.3
Msa1433870	AT3G51300.1	38.136	118	70	3	13	129	8	123	3.60e-16	73.9
Msa1433870	AT2G17800.2	37.500	120	72	3	11	129	6	123	3.60e-16	73.9
Msa1433870	AT2G17800.1	37.500	120	72	3	11	129	6	123	3.60e-16	73.9
Msa1433870	AT4G35950.1	37.500	120	72	3	11	129	6	123	3.75e-16	73.9
Msa1433870	AT3G48040.1	31.737	167	100	5	11	165	8	172	5.07e-16	73.9
Msa1433870	AT4G28950.1	36.667	120	73	3	11	129	6	123	6.96e-16	73.6
Msa1433870	AT5G45970.1	36.667	120	73	3	11	129	6	123	8.40e-16	73.2
Msa1433870	AT5G62880.1	31.461	178	104	6	11	172	8	183	1.25e-15	73.2
Msa1433870	AT3G48040.2	36.667	120	73	3	11	129	8	125	2.56e-15	71.2
Msa1433870	AT5G62880.2	35.833	120	74	3	11	129	8	125	5.85e-15	70.9
Msa1433870	AT4G35020.4	36.066	122	75	3	13	133	8	127	3.39e-14	67.8
Msa1433870	AT4G35020.5	36.066	122	75	3	13	133	8	127	3.39e-14	67.8

Find 45 sgRNAs with CRISPR-Local

Find 208 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAGTAAATTCTCATCATTT+TGG	0.200341	tig0027435:+21741	Msa1433870:three_prime_UTR
CATTATTGTTGTTACAATTC+AGG	0.219910	tig0027435:+21902	Msa1433870:three_prime_UTR
TTCAACGCCGATGGTGGATT+TGG	0.266153	tig0027435:-20029	None:intergenic
TGGAGCTGTTGGCGCTTTGC+TGG	0.307634	tig0027435:+21290	Msa1433870:CDS
CTGAATTGTAACAACAATAA+TGG	0.324342	tig0027435:-21901	None:intergenic
GCTTGTTAAGGCTCAGATTT+GGG	0.349305	tig0027435:+20084	Msa1433870:CDS
AGCTTGTTAAGGCTCAGATT+TGG	0.356509	tig0027435:+20083	Msa1433870:CDS
GAAAGAAAACATATATTTCA+TGG	0.359463	tig0027435:+21476	Msa1433870:CDS
TAATGACTCCCACAACAAAT+AGG	0.380253	tig0027435:-21823	None:intergenic
AAAATTCGATGGTAAAATAA+AGG	0.393287	tig0027435:-21798	None:intergenic
GATTCTTGATAAGCTTGTTA+AGG	0.421134	tig0027435:+20072	Msa1433870:CDS
AAGGGAGAGACTATCAATAT+TGG	0.429829	tig0027435:+21618	Msa1433870:CDS
CACTAGAAATGAATTCAACT+TGG	0.437767	tig0027435:+20003	Msa1433870:CDS
AAATATCAAAACATTTCAAA+TGG	0.447075	tig0027435:-21767	None:intergenic
AATTTGCTACTCGAAGTGTT+AGG	0.449148	tig0027435:+20050	Msa1433870:CDS
TGGCTCTGCATCAGTGCCTA+AGG	0.468622	tig0027435:+21599	Msa1433870:CDS
TATGTTGTAATCATGCTTGT+AGG	0.477521	tig0027435:+21390	Msa1433870:CDS
TTGATCGGTGATTCTGGTGT+TGG	0.493431	tig0027435:+19956	Msa1433870:CDS
AGTGAATCTAGATAAAAGAT+TGG	0.496154	tig0027435:-19984	None:intergenic
TTCTTTCTCAGCAAATGTGG+TGG	0.512980	tig0027435:-21460	None:intergenic
AAGACTCTTGAGAAAGAGAA+TGG	0.519287	tig0027435:+21579	Msa1433870:CDS
AGCAAATTCAACGCCGATGG+TGG	0.527864	tig0027435:-20035	None:intergenic
GTTTCAGATGTTAAGAAGAG+TGG	0.531135	tig0027435:+21651	Msa1433870:CDS
AAAGATGTATACATTAGAAG+AGG	0.536049	tig0027435:+21704	Msa1433870:three_prime_UTR
GGGATACTGCTGGTCAAGAA+AGG	0.539209	tig0027435:+20104	Msa1433870:CDS
ATAATGGATTCTCGAGATTG+AGG	0.540347	tig0027435:-21885	None:intergenic
ATACGATTACTTGTTCAAGT+TGG	0.541653	tig0027435:+19931	Msa1433870:CDS
AAATGTTGAGAGGTGGTTGA+AGG	0.552257	tig0027435:+21344	Msa1433870:CDS
ATATTGATAGTCTCTCCCTT+AGG	0.560011	tig0027435:-21615	None:intergenic
GCATACTACCGTGGAGCTGT+TGG	0.560757	tig0027435:+21279	Msa1433870:CDS
GGTGGCTTCTTCCGTTGACA+CGG	0.568498	tig0027435:-21442	None:intergenic
GCTCAGATTTGGGATACTGC+TGG	0.571910	tig0027435:+20094	Msa1433870:CDS
TACAAGCATGATTACAACAT+AGG	0.576438	tig0027435:-21388	None:intergenic
TGCACTAGAGTCGTTGAATG+TGG	0.582071	tig0027435:+21506	Msa1433870:CDS
GAATGTGGACAATGCTTTCG+TGG	0.585079	tig0027435:+21521	Msa1433870:CDS
GGCTCTGCATCAGTGCCTAA+GGG	0.588553	tig0027435:+21600	Msa1433870:CDS
ACACTTGCAAGCCGTGTCAA+CGG	0.594812	tig0027435:+21431	Msa1433870:CDS
CATTTGAAAATGTTGAGAGG+TGG	0.614736	tig0027435:+21337	Msa1433870:CDS
AGTAGCAAATTCAACGCCGA+TGG	0.615075	tig0027435:-20038	None:intergenic
TTGGAATCCAAATCCACCAT+CGG	0.626401	tig0027435:+20022	Msa1433870:CDS
TGCTGGTGTACGACTCAACA+AGG	0.627995	tig0027435:+21307	Msa1433870:CDS
GCAAAGCGCCAACAGCTCCA+CGG	0.659685	tig0027435:-21287	None:intergenic
ACAAATAGGAGAAAATTCGA+TGG	0.662032	tig0027435:-21809	None:intergenic
TGACATTTGAAAATGTTGAG+AGG	0.673555	tig0027435:+21334	Msa1433870:CDS
ATCACAAGTGCATACTACCG+TGG	0.721157	tig0027435:+21270	Msa1433870:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TAAACTTGTTATATTGTTTT+TGG	+	tig0027435:20851-20870	Msa1433870:intron	15.0%
!!	AAATATCAAAACATTTCAAA+TGG	-	tig0027435:21770-21789	None:intergenic	15.0%
!!!	TAAACTTGTTATATTGTTTT+TGG	+	tig0027435:20851-20870	Msa1433870:intron	15.0%
!!	AAATATCAAAACATTTCAAA+TGG	-	tig0027435:21770-21789	None:intergenic	15.0%
!!!	TACTCTTTCATTTTTAATGT+CGG	+	tig0027435:20489-20508	Msa1433870:intron	20.0%
!!	ATATTGGAAGAAATAAACAA+TGG	-	tig0027435:20654-20673	None:intergenic	20.0%
!!!	CAAATTTTGAAAAAGCTAAA+TGG	-	tig0027435:20677-20696	None:intergenic	20.0%
!!	GTAATTTCTTCAATATATCA+AGG	+	tig0027435:20696-20715	Msa1433870:intron	20.0%
!!!	TGAGATTATTTTAACTTTAG+AGG	-	tig0027435:20885-20904	None:intergenic	20.0%
!!!	AAATGGAATTCTCATTTTAT+AGG	-	tig0027435:21127-21146	None:intergenic	20.0%
!!	GAAAGAAAACATATATTTCA+TGG	+	tig0027435:21476-21495	Msa1433870:CDS	20.0%
!!	AAAATTCGATGGTAAAATAA+AGG	-	tig0027435:21801-21820	None:intergenic	20.0%
!!!	TACTCTTTCATTTTTAATGT+CGG	+	tig0027435:20489-20508	Msa1433870:intron	20.0%
!!	ATATTGGAAGAAATAAACAA+TGG	-	tig0027435:20654-20673	None:intergenic	20.0%
!!!	CAAATTTTGAAAAAGCTAAA+TGG	-	tig0027435:20677-20696	None:intergenic	20.0%
!!	GTAATTTCTTCAATATATCA+AGG	+	tig0027435:20696-20715	Msa1433870:intron	20.0%
!!!	TGAGATTATTTTAACTTTAG+AGG	-	tig0027435:20885-20904	None:intergenic	20.0%
!!!	AAATGGAATTCTCATTTTAT+AGG	-	tig0027435:21127-21146	None:intergenic	20.0%
!!	GAAAGAAAACATATATTTCA+TGG	+	tig0027435:21476-21495	Msa1433870:CDS	20.0%
!!	AAAATTCGATGGTAAAATAA+AGG	-	tig0027435:21801-21820	None:intergenic	20.0%
!	GATCGAAAAATGAATGAAAA+GGG	-	tig0027435:19858-19877	None:intergenic	25.0%
!	AGATCGAAAAATGAATGAAA+AGG	-	tig0027435:19859-19878	None:intergenic	25.0%
!	AGTGAATCTAGATAAAAGAT+TGG	-	tig0027435:19987-20006	None:intergenic	25.0%
!	AGAATGAAATTGAAGAGAAA+AGG	-	tig0027435:20135-20154	None:intergenic	25.0%
!	GATTGATGAATTGAATTGAA+TGG	+	tig0027435:20331-20350	Msa1433870:intron	25.0%
!!!	TACTTTTTTGCTTTTGATCT+TGG	+	tig0027435:20375-20394	Msa1433870:intron	25.0%
!!!	TGTATCTTAGAATTTGTTGT+TGG	+	tig0027435:20429-20448	Msa1433870:intron	25.0%
!!!	GTATCTTAGAATTTGTTGTT+GGG	+	tig0027435:20430-20449	Msa1433870:intron	25.0%
!!!	ACTCTTTCATTTTTAATGTC+GGG	+	tig0027435:20490-20509	Msa1433870:intron	25.0%
!	GTTCAATCTGTTGTTAAATA+AGG	+	tig0027435:20513-20532	Msa1433870:intron	25.0%
!	TGATATGATCACAAAAACTA+TGG	+	tig0027435:20614-20633	Msa1433870:intron	25.0%
!	TGAAAAAGCTAAATGGATAT+TGG	-	tig0027435:20670-20689	None:intergenic	25.0%
!!	AAATTGAACTCTCATTTTAG+AGG	-	tig0027435:21010-21029	None:intergenic	25.0%
!	AAAGATGTATACATTAGAAG+AGG	+	tig0027435:21704-21723	Msa1433870:three_prime_UTR	25.0%
!!	AGAGTAAATTCTCATCATTT+TGG	+	tig0027435:21741-21760	Msa1433870:three_prime_UTR	25.0%
!!	GAGTAAATTCTCATCATTTT+GGG	+	tig0027435:21742-21761	Msa1433870:three_prime_UTR	25.0%
!!!	AATTTTCTCCTATTTGTTGT+GGG	+	tig0027435:21815-21834	Msa1433870:three_prime_UTR	25.0%
!	CTGAATTGTAACAACAATAA+TGG	-	tig0027435:21904-21923	None:intergenic	25.0%
!!	CATTATTGTTGTTACAATTC+AGG	+	tig0027435:21902-21921	Msa1433870:three_prime_UTR	25.0%
!	GATCGAAAAATGAATGAAAA+GGG	-	tig0027435:19858-19877	None:intergenic	25.0%
!	AGATCGAAAAATGAATGAAA+AGG	-	tig0027435:19859-19878	None:intergenic	25.0%
!	AGTGAATCTAGATAAAAGAT+TGG	-	tig0027435:19987-20006	None:intergenic	25.0%
!	AGAATGAAATTGAAGAGAAA+AGG	-	tig0027435:20135-20154	None:intergenic	25.0%
!	GATTGATGAATTGAATTGAA+TGG	+	tig0027435:20331-20350	Msa1433870:intron	25.0%
!!!	TACTTTTTTGCTTTTGATCT+TGG	+	tig0027435:20375-20394	Msa1433870:intron	25.0%
!!!	TGTATCTTAGAATTTGTTGT+TGG	+	tig0027435:20429-20448	Msa1433870:intron	25.0%
!!!	GTATCTTAGAATTTGTTGTT+GGG	+	tig0027435:20430-20449	Msa1433870:intron	25.0%
!!!	ACTCTTTCATTTTTAATGTC+GGG	+	tig0027435:20490-20509	Msa1433870:intron	25.0%
!	GTTCAATCTGTTGTTAAATA+AGG	+	tig0027435:20513-20532	Msa1433870:intron	25.0%
!	TGATATGATCACAAAAACTA+TGG	+	tig0027435:20614-20633	Msa1433870:intron	25.0%
!	TGAAAAAGCTAAATGGATAT+TGG	-	tig0027435:20670-20689	None:intergenic	25.0%
!!	AAATTGAACTCTCATTTTAG+AGG	-	tig0027435:21010-21029	None:intergenic	25.0%
!	AAAGATGTATACATTAGAAG+AGG	+	tig0027435:21704-21723	Msa1433870:three_prime_UTR	25.0%
!!	AGAGTAAATTCTCATCATTT+TGG	+	tig0027435:21741-21760	Msa1433870:three_prime_UTR	25.0%
!!	GAGTAAATTCTCATCATTTT+GGG	+	tig0027435:21742-21761	Msa1433870:three_prime_UTR	25.0%
!!!	AATTTTCTCCTATTTGTTGT+GGG	+	tig0027435:21815-21834	Msa1433870:three_prime_UTR	25.0%
!	CTGAATTGTAACAACAATAA+TGG	-	tig0027435:21904-21923	None:intergenic	25.0%
!!	CATTATTGTTGTTACAATTC+AGG	+	tig0027435:21902-21921	Msa1433870:three_prime_UTR	25.0%
	ATCATCATCATCATCATCAA+TGG	+	tig0027435:19892-19911	Msa1433870:exon	30.0%
	TCATCATCATCATCATCAAT+GGG	+	tig0027435:19893-19912	Msa1433870:exon	30.0%
	ATACGATTACTTGTTCAAGT+TGG	+	tig0027435:19931-19950	Msa1433870:CDS	30.0%
!!!	TTGTTCAAGTTGGTTTTGAT+CGG	+	tig0027435:19941-19960	Msa1433870:CDS	30.0%
	CACTAGAAATGAATTCAACT+TGG	+	tig0027435:20003-20022	Msa1433870:CDS	30.0%
!!	GATTCTTGATAAGCTTGTTA+AGG	+	tig0027435:20072-20091	Msa1433870:CDS	30.0%
!!!	GCAAAAAGTGTGTTTTTTTG+TGG	+	tig0027435:20189-20208	Msa1433870:intron	30.0%
!!!	AGTGTGTTTTTTTGTGGTTT+TGG	+	tig0027435:20195-20214	Msa1433870:intron	30.0%
!!!	GTGTGTTTTTTTGTGGTTTT+GGG	+	tig0027435:20196-20215	Msa1433870:intron	30.0%
!!	GGGTTTTGATCTTAATGTTT+AGG	+	tig0027435:20216-20235	Msa1433870:intron	30.0%
!!	TGTGTCTGATAATTTGTTGT+TGG	+	tig0027435:20263-20282	Msa1433870:intron	30.0%
!!	GTGTCTGATAATTTGTTGTT+GGG	+	tig0027435:20264-20283	Msa1433870:intron	30.0%
	AATGGAGTGAAAATGCAAAA+GGG	+	tig0027435:20349-20368	Msa1433870:intron	30.0%
!!	CTCTTTCATTTTTAATGTCG+GGG	+	tig0027435:20491-20510	Msa1433870:intron	30.0%
	ATGATCACAAAAACTATGGA+TGG	+	tig0027435:20618-20637	Msa1433870:intron	30.0%
	GGAAGAAATAAACAATGGTT+AGG	-	tig0027435:20649-20668	None:intergenic	30.0%
!!!	AGTTTTAGAAGAGAATCTAG+GGG	-	tig0027435:20750-20769	None:intergenic	30.0%
!!!	GAGTTTTAGAAGAGAATCTA+GGG	-	tig0027435:20751-20770	None:intergenic	30.0%
!!!	AGAGTTTTAGAAGAGAATCT+AGG	-	tig0027435:20752-20771	None:intergenic	30.0%
!!	GACTTTTAGAAGAGAAACTA+TGG	-	tig0027435:20817-20836	None:intergenic	30.0%
	TAAGTGCATATTTGGTATCA+CGG	-	tig0027435:20981-21000	None:intergenic	30.0%
	GGAAAAAGTAAGTGCATATT+TGG	-	tig0027435:20989-21008	None:intergenic	30.0%
	AAAACGAGTTTACGAGATTT+AGG	-	tig0027435:21102-21121	None:intergenic	30.0%
	AGACGGAAAAATTCTCTAAA+TGG	-	tig0027435:21144-21163	None:intergenic	30.0%
	TGTAAGTATCACATTGTAGA+CGG	-	tig0027435:21161-21180	None:intergenic	30.0%
	TGACATTTGAAAATGTTGAG+AGG	+	tig0027435:21334-21353	Msa1433870:CDS	30.0%
	TACAAGCATGATTACAACAT+AGG	-	tig0027435:21391-21410	None:intergenic	30.0%
	TATGTTGTAATCATGCTTGT+AGG	+	tig0027435:21390-21409	Msa1433870:CDS	30.0%
	ACAAATAGGAGAAAATTCGA+TGG	-	tig0027435:21812-21831	None:intergenic	30.0%
!!	GAATTTTCTCCTATTTGTTG+TGG	+	tig0027435:21814-21833	Msa1433870:three_prime_UTR	30.0%
	ATCATCATCATCATCATCAA+TGG	+	tig0027435:19892-19911	Msa1433870:exon	30.0%
	TCATCATCATCATCATCAAT+GGG	+	tig0027435:19893-19912	Msa1433870:exon	30.0%
	ATACGATTACTTGTTCAAGT+TGG	+	tig0027435:19931-19950	Msa1433870:CDS	30.0%
!!!	TTGTTCAAGTTGGTTTTGAT+CGG	+	tig0027435:19941-19960	Msa1433870:CDS	30.0%
	CACTAGAAATGAATTCAACT+TGG	+	tig0027435:20003-20022	Msa1433870:CDS	30.0%
!!	GATTCTTGATAAGCTTGTTA+AGG	+	tig0027435:20072-20091	Msa1433870:CDS	30.0%
!!!	GCAAAAAGTGTGTTTTTTTG+TGG	+	tig0027435:20189-20208	Msa1433870:intron	30.0%
!!!	AGTGTGTTTTTTTGTGGTTT+TGG	+	tig0027435:20195-20214	Msa1433870:intron	30.0%
!!!	GTGTGTTTTTTTGTGGTTTT+GGG	+	tig0027435:20196-20215	Msa1433870:intron	30.0%
!!	GGGTTTTGATCTTAATGTTT+AGG	+	tig0027435:20216-20235	Msa1433870:intron	30.0%
!!	TGTGTCTGATAATTTGTTGT+TGG	+	tig0027435:20263-20282	Msa1433870:intron	30.0%
!!	GTGTCTGATAATTTGTTGTT+GGG	+	tig0027435:20264-20283	Msa1433870:intron	30.0%
	AATGGAGTGAAAATGCAAAA+GGG	+	tig0027435:20349-20368	Msa1433870:intron	30.0%
!!	CTCTTTCATTTTTAATGTCG+GGG	+	tig0027435:20491-20510	Msa1433870:intron	30.0%
	ATGATCACAAAAACTATGGA+TGG	+	tig0027435:20618-20637	Msa1433870:intron	30.0%
	GGAAGAAATAAACAATGGTT+AGG	-	tig0027435:20649-20668	None:intergenic	30.0%
!!!	AGTTTTAGAAGAGAATCTAG+GGG	-	tig0027435:20750-20769	None:intergenic	30.0%
!!!	GAGTTTTAGAAGAGAATCTA+GGG	-	tig0027435:20751-20770	None:intergenic	30.0%
!!!	AGAGTTTTAGAAGAGAATCT+AGG	-	tig0027435:20752-20771	None:intergenic	30.0%
!!	GACTTTTAGAAGAGAAACTA+TGG	-	tig0027435:20817-20836	None:intergenic	30.0%
	TAAGTGCATATTTGGTATCA+CGG	-	tig0027435:20981-21000	None:intergenic	30.0%
	GGAAAAAGTAAGTGCATATT+TGG	-	tig0027435:20989-21008	None:intergenic	30.0%
	AAAACGAGTTTACGAGATTT+AGG	-	tig0027435:21102-21121	None:intergenic	30.0%
	AGACGGAAAAATTCTCTAAA+TGG	-	tig0027435:21144-21163	None:intergenic	30.0%
	TGTAAGTATCACATTGTAGA+CGG	-	tig0027435:21161-21180	None:intergenic	30.0%
	TGACATTTGAAAATGTTGAG+AGG	+	tig0027435:21334-21353	Msa1433870:CDS	30.0%
	TACAAGCATGATTACAACAT+AGG	-	tig0027435:21391-21410	None:intergenic	30.0%
	TATGTTGTAATCATGCTTGT+AGG	+	tig0027435:21390-21409	Msa1433870:CDS	30.0%
	ACAAATAGGAGAAAATTCGA+TGG	-	tig0027435:21812-21831	None:intergenic	30.0%
!!	GAATTTTCTCCTATTTGTTG+TGG	+	tig0027435:21814-21833	Msa1433870:three_prime_UTR	30.0%
!!	AATTTGCTACTCGAAGTGTT+AGG	+	tig0027435:20050-20069	Msa1433870:CDS	35.0%
	GAATGGAGTGAAAATGCAAA+AGG	+	tig0027435:20348-20367	Msa1433870:intron	35.0%
	AAGACACTGATCATAAACAG+AGG	+	tig0027435:20403-20422	Msa1433870:intron	35.0%
!!	AATTTGTTGTTGGGTAGAGA+AGG	+	tig0027435:20273-20292	Msa1433870:intron	35.0%
	ATCACAAAAACTATGGATGG+TGG	+	tig0027435:20621-20640	Msa1433870:intron	35.0%
	GAAGAGAAACTATGGCTAAT+TGG	-	tig0027435:20809-20828	None:intergenic	35.0%
	AATGAGAGACTACAAGATTC+AGG	-	tig0027435:21222-21241	None:intergenic	35.0%
	CATTTGAAAATGTTGAGAGG+TGG	+	tig0027435:21337-21356	Msa1433870:CDS	35.0%
!	GTTTTCTTTCTCAGCAAATG+TGG	-	tig0027435:21466-21485	None:intergenic	35.0%
	AAGACTCTTGAGAAAGAGAA+TGG	+	tig0027435:21579-21598	Msa1433870:CDS	35.0%
!	ATATTGATAGTCTCTCCCTT+AGG	-	tig0027435:21618-21637	None:intergenic	35.0%
	AAGGGAGAGACTATCAATAT+TGG	+	tig0027435:21618-21637	Msa1433870:CDS	35.0%
	GTTTCAGATGTTAAGAAGAG+TGG	+	tig0027435:21651-21670	Msa1433870:CDS	35.0%
	TAATGACTCCCACAACAAAT+AGG	-	tig0027435:21826-21845	None:intergenic	35.0%
!!	GTTTTCGTTTGCTGAGATAT+AGG	+	tig0027435:21857-21876	Msa1433870:three_prime_UTR	35.0%
!!	ATAATGGATTCTCGAGATTG+AGG	-	tig0027435:21888-21907	None:intergenic	35.0%
!!	AATTTGCTACTCGAAGTGTT+AGG	+	tig0027435:20050-20069	Msa1433870:CDS	35.0%
	GAATGGAGTGAAAATGCAAA+AGG	+	tig0027435:20348-20367	Msa1433870:intron	35.0%
	AAGACACTGATCATAAACAG+AGG	+	tig0027435:20403-20422	Msa1433870:intron	35.0%
!!	AATTTGTTGTTGGGTAGAGA+AGG	+	tig0027435:20273-20292	Msa1433870:intron	35.0%
	ATCACAAAAACTATGGATGG+TGG	+	tig0027435:20621-20640	Msa1433870:intron	35.0%
	GAAGAGAAACTATGGCTAAT+TGG	-	tig0027435:20809-20828	None:intergenic	35.0%
	AATGAGAGACTACAAGATTC+AGG	-	tig0027435:21222-21241	None:intergenic	35.0%
	CATTTGAAAATGTTGAGAGG+TGG	+	tig0027435:21337-21356	Msa1433870:CDS	35.0%
!	GTTTTCTTTCTCAGCAAATG+TGG	-	tig0027435:21466-21485	None:intergenic	35.0%
	AAGACTCTTGAGAAAGAGAA+TGG	+	tig0027435:21579-21598	Msa1433870:CDS	35.0%
!	ATATTGATAGTCTCTCCCTT+AGG	-	tig0027435:21618-21637	None:intergenic	35.0%
	AAGGGAGAGACTATCAATAT+TGG	+	tig0027435:21618-21637	Msa1433870:CDS	35.0%
	GTTTCAGATGTTAAGAAGAG+TGG	+	tig0027435:21651-21670	Msa1433870:CDS	35.0%
	TAATGACTCCCACAACAAAT+AGG	-	tig0027435:21826-21845	None:intergenic	35.0%
!!	GTTTTCGTTTGCTGAGATAT+AGG	+	tig0027435:21857-21876	Msa1433870:three_prime_UTR	35.0%
!!	ATAATGGATTCTCGAGATTG+AGG	-	tig0027435:21888-21907	None:intergenic	35.0%
!!!	TTGGTTTTGATCGGTGATTC+TGG	+	tig0027435:19950-19969	Msa1433870:CDS	40.0%
	TTGGAATCCAAATCCACCAT+CGG	+	tig0027435:20022-20041	Msa1433870:CDS	40.0%
!!	AGCTTGTTAAGGCTCAGATT+TGG	+	tig0027435:20083-20102	Msa1433870:CDS	40.0%
!	GCTTGTTAAGGCTCAGATTT+GGG	+	tig0027435:20084-20103	Msa1433870:CDS	40.0%
	GTTGGGTAGAGAATGAATTG+AGG	+	tig0027435:20281-20300	Msa1433870:intron	40.0%
	TGTTGGGTAGAGAAGGAATT+TGG	+	tig0027435:20446-20465	Msa1433870:intron	40.0%
	GTTGGGTAGAGAAGGAATTT+GGG	+	tig0027435:20447-20466	Msa1433870:intron	40.0%
	GAAGAGAATCTAGGGGTAAT+TGG	-	tig0027435:20743-20762	None:intergenic	40.0%
	AAATGTTGAGAGGTGGTTGA+AGG	+	tig0027435:21344-21363	Msa1433870:CDS	40.0%
	TTCTTTCTCAGCAAATGTGG+TGG	-	tig0027435:21463-21482	None:intergenic	40.0%
!!!	TTGGTTTTGATCGGTGATTC+TGG	+	tig0027435:19950-19969	Msa1433870:CDS	40.0%
	TTGGAATCCAAATCCACCAT+CGG	+	tig0027435:20022-20041	Msa1433870:CDS	40.0%
!!	AGCTTGTTAAGGCTCAGATT+TGG	+	tig0027435:20083-20102	Msa1433870:CDS	40.0%
!	GCTTGTTAAGGCTCAGATTT+GGG	+	tig0027435:20084-20103	Msa1433870:CDS	40.0%
	GTTGGGTAGAGAATGAATTG+AGG	+	tig0027435:20281-20300	Msa1433870:intron	40.0%
	TGTTGGGTAGAGAAGGAATT+TGG	+	tig0027435:20446-20465	Msa1433870:intron	40.0%
	GTTGGGTAGAGAAGGAATTT+GGG	+	tig0027435:20447-20466	Msa1433870:intron	40.0%
	GAAGAGAATCTAGGGGTAAT+TGG	-	tig0027435:20743-20762	None:intergenic	40.0%
	AAATGTTGAGAGGTGGTTGA+AGG	+	tig0027435:21344-21363	Msa1433870:CDS	40.0%
	TTCTTTCTCAGCAAATGTGG+TGG	-	tig0027435:21463-21482	None:intergenic	40.0%
	TTGATCGGTGATTCTGGTGT+TGG	+	tig0027435:19956-19975	Msa1433870:CDS	45.0%
	AGTAGCAAATTCAACGCCGA+TGG	-	tig0027435:20041-20060	None:intergenic	45.0%
	AAGATGTCCTGCTGCATGTT+TGG	+	tig0027435:20924-20943	Msa1433870:intron	45.0%
	TGTGATACCAAACATGCAGC+AGG	-	tig0027435:20934-20953	None:intergenic	45.0%
	ATCACAAGTGCATACTACCG+TGG	+	tig0027435:21270-21289	Msa1433870:CDS	45.0%
	TGCACTAGAGTCGTTGAATG+TGG	+	tig0027435:21506-21525	Msa1433870:CDS	45.0%
	GAATGTGGACAATGCTTTCG+TGG	+	tig0027435:21521-21540	Msa1433870:CDS	45.0%
	TTGATCGGTGATTCTGGTGT+TGG	+	tig0027435:19956-19975	Msa1433870:CDS	45.0%
	AGTAGCAAATTCAACGCCGA+TGG	-	tig0027435:20041-20060	None:intergenic	45.0%
	AAGATGTCCTGCTGCATGTT+TGG	+	tig0027435:20924-20943	Msa1433870:intron	45.0%
	TGTGATACCAAACATGCAGC+AGG	-	tig0027435:20934-20953	None:intergenic	45.0%
	ATCACAAGTGCATACTACCG+TGG	+	tig0027435:21270-21289	Msa1433870:CDS	45.0%
	TGCACTAGAGTCGTTGAATG+TGG	+	tig0027435:21506-21525	Msa1433870:CDS	45.0%
	GAATGTGGACAATGCTTTCG+TGG	+	tig0027435:21521-21540	Msa1433870:CDS	45.0%
!!	TTCAACGCCGATGGTGGATT+TGG	-	tig0027435:20032-20051	None:intergenic	50.0%
	AGCAAATTCAACGCCGATGG+TGG	-	tig0027435:20038-20057	None:intergenic	50.0%
!	GCTCAGATTTGGGATACTGC+TGG	+	tig0027435:20094-20113	Msa1433870:CDS	50.0%
	GGGATACTGCTGGTCAAGAA+AGG	+	tig0027435:20104-20123	Msa1433870:CDS	50.0%
	TGCTGGTGTACGACTCAACA+AGG	+	tig0027435:21307-21326	Msa1433870:CDS	50.0%
	ACACTTGCAAGCCGTGTCAA+CGG	+	tig0027435:21431-21450	Msa1433870:CDS	50.0%
!!	TTCAACGCCGATGGTGGATT+TGG	-	tig0027435:20032-20051	None:intergenic	50.0%
	AGCAAATTCAACGCCGATGG+TGG	-	tig0027435:20038-20057	None:intergenic	50.0%
!	GCTCAGATTTGGGATACTGC+TGG	+	tig0027435:20094-20113	Msa1433870:CDS	50.0%
	GGGATACTGCTGGTCAAGAA+AGG	+	tig0027435:20104-20123	Msa1433870:CDS	50.0%
	TGCTGGTGTACGACTCAACA+AGG	+	tig0027435:21307-21326	Msa1433870:CDS	50.0%
	ACACTTGCAAGCCGTGTCAA+CGG	+	tig0027435:21431-21450	Msa1433870:CDS	50.0%
	GCATACTACCGTGGAGCTGT+TGG	+	tig0027435:21279-21298	Msa1433870:CDS	55.0%
	GGTGGCTTCTTCCGTTGACA+CGG	-	tig0027435:21445-21464	None:intergenic	55.0%
!	TGGCTCTGCATCAGTGCCTA+AGG	+	tig0027435:21599-21618	Msa1433870:CDS	55.0%
	GGCTCTGCATCAGTGCCTAA+GGG	+	tig0027435:21600-21619	Msa1433870:CDS	55.0%
	GCATACTACCGTGGAGCTGT+TGG	+	tig0027435:21279-21298	Msa1433870:CDS	55.0%
	GGTGGCTTCTTCCGTTGACA+CGG	-	tig0027435:21445-21464	None:intergenic	55.0%
!	TGGCTCTGCATCAGTGCCTA+AGG	+	tig0027435:21599-21618	Msa1433870:CDS	55.0%
	GGCTCTGCATCAGTGCCTAA+GGG	+	tig0027435:21600-21619	Msa1433870:CDS	55.0%
!	GCAAAGCGCCAACAGCTCCA+CGG	-	tig0027435:21290-21309	None:intergenic	60.0%
	TGGAGCTGTTGGCGCTTTGC+TGG	+	tig0027435:21290-21309	Msa1433870:CDS	60.0%
!	GCAAAGCGCCAACAGCTCCA+CGG	-	tig0027435:21290-21309	None:intergenic	60.0%
	TGGAGCTGTTGGCGCTTTGC+TGG	+	tig0027435:21290-21309	Msa1433870:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
tig0027435	gene	19804	21946	19804	ID=Msa1433870;Name=Msa1433870
tig0027435	mRNA	19804	21946	19804	ID=Msa1433870-mRNA-1;Parent=Msa1433870;Name=Msa1433870-mRNA-1;_AED=0.05;_eAED=0.05;_QI=107\|1\|1\|1\|1\|1\|2\|254\|215
tig0027435	exon	19804	20125	19804	ID=Msa1433870-mRNA-1:exon:8889;Parent=Msa1433870-mRNA-1
tig0027435	exon	21260	21946	21260	ID=Msa1433870-mRNA-1:exon:8890;Parent=Msa1433870-mRNA-1
tig0027435	five_prime_UTR	19804	19910	19804	ID=Msa1433870-mRNA-1:five_prime_utr;Parent=Msa1433870-mRNA-1
tig0027435	CDS	19911	20125	19911	ID=Msa1433870-mRNA-1:cds;Parent=Msa1433870-mRNA-1
tig0027435	CDS	21260	21692	21260	ID=Msa1433870-mRNA-1:cds;Parent=Msa1433870-mRNA-1
tig0027435	three_prime_UTR	21693	21946	21693	ID=Msa1433870-mRNA-1:three_prime_utr;Parent=Msa1433870-mRNA-1

Gene Sequence

>Msa1433870

ATGGGTGCTGTAGATGAAGAATACGATTACTTGTTCAAGTTGGTTTTGATCGGTGATTCTGGTGTTGGAAAGTCCAATCTTTTATCTAGATTCACTAGAAATGAATTCAACTTGGAATCCAAATCCACCATCGGCGTTGAATTTGCTACTCGAAGTGTTAGGATTCTTGATAAGCTTGTTAAGGCTCAGATTTGGGATACTGCTGGTCAAGAAAGATATCGTGCAATCACAAGTGCATACTACCGTGGAGCTGTTGGCGCTTTGCTGGTGTACGACTCAACAAGGCATGTGACATTTGAAAATGTTGAGAGGTGGTTGAAGGAGCTTCGAGATCATACAGATGCCTATGTTGTAATCATGCTTGTAGGAAACAAAGCTGATCTTCGACACTTGCAAGCCGTGTCAACGGAAGAAGCCACCACATTTGCTGAGAAAGAAAACATATATTTCATGGAAACTTCTGCACTAGAGTCGTTGAATGTGGACAATGCTTTCGTGGAAGTGCTCACTCAGATATACAATGTTGTGAGTAAGAAGACTCTTGAGAAAGAGAATGGCTCTGCATCAGTGCCTAAGGGAGAGACTATCAATATTGGTAAAGATGATGTTTCAGATGTTAAGAAGAGTGGATGCTGCAGTACAGCATAG

Protein sequence

>Msa1433870

MGAVDEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGNKADLRHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSKKTLEKENGSASVPKGETINIGKDDVSDVKKSGCCSTA*