Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523430 | XP_013462277.1 | 99.797 | 492 | 1 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1028 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523430 | sp|P25890|CATA_PEA | 92.105 | 494 | 37 | 1 | 1 | 492 | 1 | 494 | 0.0 | 968 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523430 | A0A072V3A8 | 99.797 | 492 | 1 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1028 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0523430 | 0.824429 | 8.110184e-54 | -8.615850e-47 |
| Msa0002110 | Msa0523430 | 0.852723 | 3.828624e-61 | -8.615850e-47 |
| Msa0007810 | Msa0523430 | 0.811223 | 7.796961e-51 | -8.615850e-47 |
| Msa0011440 | Msa0523430 | 0.800375 | 1.484553e-48 | -8.615850e-47 |
| Msa0011450 | Msa0523430 | 0.815137 | 1.078480e-51 | -8.615850e-47 |
| Msa0017300 | Msa0523430 | 0.815787 | 7.730430e-52 | -8.615850e-47 |
| Msa0029520 | Msa0523430 | 0.814040 | 1.886339e-51 | -8.615850e-47 |
| Msa0033840 | Msa0523430 | 0.802445 | 5.590530e-49 | -8.615850e-47 |
| Msa0035050 | Msa0523430 | 0.815798 | 7.685575e-52 | -8.615850e-47 |
| Msa0042760 | Msa0523430 | 0.806011 | 1.011896e-49 | -8.615850e-47 |
| Msa0046110 | Msa0523430 | 0.817953 | 2.523560e-52 | -8.615850e-47 |
| Msa0056230 | Msa0523430 | 0.807500 | 4.904859e-50 | -8.615850e-47 |
| Msa0065670 | Msa0523430 | 0.823218 | 1.559459e-53 | -8.615850e-47 |
| Msa0066890 | Msa0523430 | 0.838405 | 2.931957e-57 | -8.615850e-47 |
| Msa0067590 | Msa0523430 | 0.846358 | 2.284441e-59 | -8.615850e-47 |
| Msa0081610 | Msa0523430 | 0.832468 | 9.290898e-56 | -8.615850e-47 |
| Msa0093950 | Msa0523430 | 0.840210 | 9.972708e-58 | -8.615850e-47 |
| Msa0094170 | Msa0523430 | 0.849748 | 2.649552e-60 | -8.615850e-47 |
| Msa0095810 | Msa0523430 | 0.854718 | 1.021401e-61 | -8.615850e-47 |
| Msa0100290 | Msa0523430 | -0.806166 | 9.385902e-50 | -8.615850e-47 |
| Msa0111110 | Msa0523430 | 0.845811 | 3.217353e-59 | -8.615850e-47 |
| Msa0113370 | Msa0523430 | 0.836642 | 8.303081e-57 | -8.615850e-47 |
| Msa0120880 | Msa0523430 | -0.848169 | 7.273985e-60 | -8.615850e-47 |
| Msa0133140 | Msa0523430 | 0.801618 | 8.270984e-49 | -8.615850e-47 |
| Msa0136870 | Msa0523430 | 0.830671 | 2.575307e-55 | -8.615850e-47 |
| Msa0138990 | Msa0523430 | 0.858747 | 6.662664e-63 | -8.615850e-47 |
| Msa0140770 | Msa0523430 | 0.967852 | 7.485709e-128 | -8.615850e-47 |
| Msa0151380 | Msa0523430 | 0.808054 | 3.739800e-50 | -8.615850e-47 |
| Msa0151510 | Msa0523430 | 0.824860 | 6.420368e-54 | -8.615850e-47 |
| Msa0154880 | Msa0523430 | 0.820898 | 5.378374e-53 | -8.615850e-47 |
| Msa0154890 | Msa0523430 | 0.848919 | 4.507952e-60 | -8.615850e-47 |
| Msa0156760 | Msa0523430 | -0.837416 | 5.266658e-57 | -8.615850e-47 |
| Msa0168770 | Msa0523430 | 0.813602 | 2.356037e-51 | -8.615850e-47 |
| Msa0173950 | Msa0523430 | 0.830025 | 3.704520e-55 | -8.615850e-47 |
| Msa0178840 | Msa0523430 | 0.811304 | 7.484517e-51 | -8.615850e-47 |
| Msa0187590 | Msa0523430 | 0.842902 | 1.947404e-58 | -8.615850e-47 |
| Msa0189560 | Msa0523430 | 0.843004 | 1.829392e-58 | -8.615850e-47 |
| Msa0206040 | Msa0523430 | 0.802991 | 4.314224e-49 | -8.615850e-47 |
| Msa0220400 | Msa0523430 | 0.855694 | 5.312450e-62 | -8.615850e-47 |
| Msa0225190 | Msa0523430 | 0.818181 | 2.241033e-52 | -8.615850e-47 |
| Msa0225790 | Msa0523430 | 0.839813 | 1.265499e-57 | -8.615850e-47 |
| Msa0234410 | Msa0523430 | 0.803735 | 3.025268e-49 | -8.615850e-47 |
| Msa0370580 | Msa0523430 | 0.858463 | 8.095213e-63 | -8.615850e-47 |
| Msa0373120 | Msa0523430 | 0.837356 | 5.454606e-57 | -8.615850e-47 |
| Msa0375330 | Msa0523430 | 0.837695 | 4.465910e-57 | -8.615850e-47 |
| Msa0380400 | Msa0523430 | 0.825087 | 5.676002e-54 | -8.615850e-47 |
| Msa0385930 | Msa0523430 | 0.940021 | 4.748835e-100 | -8.615850e-47 |
| Msa0389080 | Msa0523430 | 0.824762 | 6.769552e-54 | -8.615850e-47 |
| Msa0402070 | Msa0523430 | 0.803498 | 3.387138e-49 | -8.615850e-47 |
| Msa0403480 | Msa0523430 | 0.875093 | 4.041289e-68 | -8.615850e-47 |
| Msa0415160 | Msa0523430 | 0.800598 | 1.337121e-48 | -8.615850e-47 |
| Msa0435130 | Msa0523430 | 0.801789 | 7.628014e-49 | -8.615850e-47 |
| Msa0476170 | Msa0523430 | 0.831696 | 1.441789e-55 | -8.615850e-47 |
| Msa0479760 | Msa0523430 | 0.968689 | 4.912302e-129 | -8.615850e-47 |
| Msa0240900 | Msa0523430 | -0.809738 | 1.631537e-50 | -8.615850e-47 |
| Msa0260580 | Msa0523430 | 0.853868 | 1.797947e-61 | -8.615850e-47 |
| Msa0260640 | Msa0523430 | 0.838786 | 2.338495e-57 | -8.615850e-47 |
| Msa0261350 | Msa0523430 | 0.804701 | 1.903772e-49 | -8.615850e-47 |
| Msa0262350 | Msa0523430 | 0.807784 | 4.267454e-50 | -8.615850e-47 |
| Msa0295460 | Msa0523430 | 0.813178 | 2.918590e-51 | -8.615850e-47 |
| Msa0297610 | Msa0523430 | -0.801848 | 7.417499e-49 | -8.615850e-47 |
| Msa0299530 | Msa0523430 | 0.818380 | 2.020342e-52 | -8.615850e-47 |
| Msa0300280 | Msa0523430 | -0.807194 | 5.693628e-50 | -8.615850e-47 |
| Msa0326170 | Msa0523430 | 0.835982 | 1.221757e-56 | -8.615850e-47 |
| Msa0326630 | Msa0523430 | 0.809934 | 1.480230e-50 | -8.615850e-47 |
| Msa0334450 | Msa0523430 | 0.853957 | 1.694412e-61 | -8.615850e-47 |
| Msa0337710 | Msa0523430 | -0.820012 | 8.587241e-53 | -8.615850e-47 |
| Msa0340700 | Msa0523430 | 0.801583 | 8.409861e-49 | -8.615850e-47 |
| Msa0343500 | Msa0523430 | -0.833995 | 3.871208e-56 | -8.615850e-47 |
| Msa0523420 | Msa0523430 | 0.823092 | 1.668650e-53 | -8.615850e-47 |
| Msa0523430 | Msa0523490 | 0.972264 | 1.749666e-134 | -8.615850e-47 |
| Msa0523430 | Msa0536350 | -0.807561 | 4.760683e-50 | -8.615850e-47 |
| Msa0523430 | Msa0550990 | 0.806927 | 6.486614e-50 | -8.615850e-47 |
| Msa0523430 | Msa0559450 | 0.845093 | 5.034366e-59 | -8.615850e-47 |
| Msa0523430 | Msa0559650 | 0.802054 | 6.730923e-49 | -8.615850e-47 |
| Msa0523430 | Msa0566940 | 0.847296 | 1.265126e-59 | -8.615850e-47 |
| Msa0523430 | Msa0572550 | 0.809178 | 2.150943e-50 | -8.615850e-47 |
| Msa0523430 | Msa0576020 | 0.858020 | 1.096936e-62 | -8.615850e-47 |
| Msa0523430 | Msa0576080 | 0.885816 | 5.864741e-72 | -8.615850e-47 |
| Msa0523430 | Msa0576090 | 0.868287 | 7.302765e-66 | -8.615850e-47 |
| Msa0523430 | Msa0576120 | 0.894804 | 1.747047e-75 | -8.615850e-47 |
| Msa0523430 | Msa0583360 | 0.819156 | 1.346667e-52 | -8.615850e-47 |
| Msa0523430 | Msa0590620 | 0.805667 | 1.195058e-49 | -8.615850e-47 |
| Msa0523430 | Msa0605040 | 0.813234 | 2.837979e-51 | -8.615850e-47 |
| Msa0523430 | Msa0605160 | 0.809453 | 1.878209e-50 | -8.615850e-47 |
| Msa0523430 | Msa0630770 | 0.832895 | 7.279455e-56 | -8.615850e-47 |
| Msa0523430 | Msa0637930 | 0.839302 | 1.718622e-57 | -8.615850e-47 |
| Msa0523430 | Msa0638010 | 0.863894 | 1.796458e-64 | -8.615850e-47 |
| Msa0523430 | Msa0646410 | 0.821381 | 4.161077e-53 | -8.615850e-47 |
| Msa0523430 | Msa0665530 | 0.801453 | 8.940840e-49 | -8.615850e-47 |
| Msa0523430 | Msa0671210 | -0.808375 | 3.194622e-50 | -8.615850e-47 |
| Msa0523430 | Msa0676570 | 0.811132 | 8.158112e-51 | -8.615850e-47 |
| Msa0523430 | Msa0686950 | 0.889853 | 1.669389e-73 | -8.615850e-47 |
| Msa0523430 | Msa0701800 | 0.803784 | 2.954706e-49 | -8.615850e-47 |
| Msa0523430 | Msa0742370 | 0.845379 | 4.213336e-59 | -8.615850e-47 |
| Msa0523430 | Msa0779450 | 0.844910 | 5.639641e-59 | -8.615850e-47 |
| Msa0523430 | Msa0795750 | -0.815049 | 1.128199e-51 | -8.615850e-47 |
| Msa0523430 | Msa0796580 | 0.811350 | 7.316828e-51 | -8.615850e-47 |
| Msa0523430 | Msa0823480 | 0.825152 | 5.477313e-54 | -8.615850e-47 |
| Msa0523430 | Msa0827520 | 0.886975 | 2.140868e-72 | -8.615850e-47 |
| Msa0523430 | Msa0833950 | 0.843879 | 1.067968e-58 | -8.615850e-47 |
| Msa0523430 | Msa0862480 | 0.853586 | 2.167352e-61 | -8.615850e-47 |
| Msa0523430 | Msa0864820 | 0.804352 | 2.250973e-49 | -8.615850e-47 |
| Msa0523430 | Msa0870460 | 0.824626 | 7.290884e-54 | -8.615850e-47 |
| Msa0523430 | Msa0881530 | 0.841932 | 3.520302e-58 | -8.615850e-47 |
| Msa0523430 | Msa0919120 | 0.805336 | 1.402358e-49 | -8.615850e-47 |
| Msa0523430 | Msa0971690 | 0.800692 | 1.279481e-48 | -8.615850e-47 |
| Msa0523430 | Msa0982090 | 0.833322 | 5.699543e-56 | -8.615850e-47 |
| Msa0523430 | Msa1004410 | 0.835361 | 1.754614e-56 | -8.615850e-47 |
| Msa0523430 | Msa1039190 | 0.830025 | 3.704520e-55 | -8.615850e-47 |
| Msa0523430 | Msa1039440 | 0.830878 | 2.291967e-55 | -8.615850e-47 |
| Msa0523430 | Msa1083620 | 0.818569 | 1.830650e-52 | -8.615850e-47 |
| Msa0523430 | Msa1085610 | 0.896150 | 4.860225e-76 | -8.615850e-47 |
| Msa0523430 | Msa1087520 | 0.855778 | 5.019413e-62 | -8.615850e-47 |
| Msa0523430 | Msa1088400 | 0.801128 | 1.042065e-48 | -8.615850e-47 |
| Msa0523430 | Msa1105510 | -0.801615 | 8.280829e-49 | -8.615850e-47 |
| Msa0523430 | Msa1121720 | 0.800695 | 1.277591e-48 | -8.615850e-47 |
| Msa0523430 | Msa1123770 | -0.833165 | 6.238153e-56 | -8.615850e-47 |
| Msa0523430 | Msa1128610 | 0.864583 | 1.095276e-64 | -8.615850e-47 |
| Msa0523430 | Msa1129200 | 0.800963 | 1.126215e-48 | -8.615850e-47 |
| Msa0523430 | Msa1129300 | 0.857618 | 1.443369e-62 | -8.615850e-47 |
| Msa0523430 | Msa1132900 | 0.803605 | 3.218345e-49 | -8.615850e-47 |
| Msa0523430 | Msa1143370 | 0.874766 | 5.225267e-68 | -8.615850e-47 |
| Msa0523430 | Msa1143810 | 0.806293 | 8.825579e-50 | -8.615850e-47 |
| Msa0523430 | Msa1150960 | -0.816602 | 5.080310e-52 | -8.615850e-47 |
| Msa0523430 | Msa1156120 | 0.814959 | 1.180940e-51 | -8.615850e-47 |
| Msa0523430 | Msa1169910 | -0.832274 | 1.037752e-55 | -8.615850e-47 |
| Msa0523430 | Msa1190100 | 0.825866 | 3.710319e-54 | -8.615850e-47 |
| Msa0523430 | Msa1206400 | 0.829737 | 4.355160e-55 | -8.615850e-47 |
| Msa0523430 | Msa1206450 | 0.833277 | 5.849765e-56 | -8.615850e-47 |
| Msa0523430 | Msa1207920 | 0.801156 | 1.028555e-48 | -8.615850e-47 |
| Msa0523430 | Msa1209850 | -0.802919 | 4.464083e-49 | -8.615850e-47 |
| Msa0523430 | Msa1209870 | 0.827370 | 1.624281e-54 | -8.615850e-47 |
| Msa0523430 | Msa1225860 | 0.815733 | 7.948336e-52 | -8.615850e-47 |
| Msa0523430 | Msa1229670 | 0.813352 | 2.673062e-51 | -8.615850e-47 |
| Msa0523430 | Msa1236120 | 0.803770 | 2.975179e-49 | -8.615850e-47 |
| Msa0523430 | Msa1258030 | 0.853346 | 2.538813e-61 | -8.615850e-47 |
| Msa0523430 | Msa1273620 | 0.824877 | 6.361072e-54 | -8.615850e-47 |
| Msa0523430 | Msa1277260 | -0.804293 | 2.315797e-49 | -8.615850e-47 |
| Msa0523430 | Msa1285360 | 0.814993 | 1.160603e-51 | -8.615850e-47 |
| Msa0523430 | Msa1311600 | 0.816384 | 5.685325e-52 | -8.615850e-47 |
| Msa0523430 | Msa1330540 | 0.862627 | 4.431748e-64 | -8.615850e-47 |
| Msa0523430 | Msa1340200 | -0.804329 | 2.276683e-49 | -8.615850e-47 |
| Msa0523430 | Msa1342960 | 0.900827 | 4.962088e-78 | -8.615850e-47 |
| Msa0523430 | Msa1348170 | 0.839091 | 1.950046e-57 | -8.615850e-47 |
| Msa0523430 | Msa1352600 | 0.810039 | 1.405467e-50 | -8.615850e-47 |
| Msa0523430 | Msa1356100 | 0.802993 | 4.309055e-49 | -8.615850e-47 |
| Msa0523430 | Msa1356600 | 0.833929 | 4.020115e-56 | -8.615850e-47 |
| Msa0523430 | Msa1359400 | -0.801638 | 8.192115e-49 | -8.615850e-47 |
| Msa0523430 | Msa1361670 | 0.863050 | 3.281203e-64 | -8.615850e-47 |
| Msa0523430 | Msa1363820 | 0.819063 | 1.414059e-52 | -8.615850e-47 |
| Msa0523430 | Msa1364350 | 0.868486 | 6.299396e-66 | -8.615850e-47 |
| Msa0523430 | Msa1367400 | 0.803263 | 3.789881e-49 | -8.615850e-47 |
| Msa0523430 | Msa1372770 | 0.853132 | 2.924130e-61 | -8.615850e-47 |
| Msa0523430 | Msa1375610 | 0.824514 | 7.747717e-54 | -8.615850e-47 |
| Msa0523430 | Msa1375970 | 0.818503 | 1.894327e-52 | -8.615850e-47 |
| Msa0523430 | Msa1376550 | 0.826095 | 3.273033e-54 | -8.615850e-47 |
| Msa0523430 | Msa1381340 | 0.804775 | 1.836958e-49 | -8.615850e-47 |
| Msa0523430 | Msa1382380 | 0.835931 | 1.259166e-56 | -8.615850e-47 |
| Msa0523430 | Msa1383630 | -0.801191 | 1.011776e-48 | -8.615850e-47 |
| Msa0523430 | Msa1385720 | -0.834313 | 3.221003e-56 | -8.615850e-47 |
| Msa0523430 | Msa1388030 | 0.832515 | 9.047058e-56 | -8.615850e-47 |
| Msa0523430 | Msa1395430 | 0.803207 | 3.891317e-49 | -8.615850e-47 |
| Msa0523430 | Msa1428230 | 0.808502 | 3.001056e-50 | -8.615850e-47 |
| Msa0523430 | Msa1431510 | 0.858607 | 7.334951e-63 | -8.615850e-47 |
| Msa0523430 | Msa1433870 | -0.802661 | 5.046629e-49 | -8.615850e-47 |
| Msa0523430 | Msa1434090 | -0.827900 | 1.211541e-54 | -8.615850e-47 |
| Msa0523430 | Msa1440990 | 0.804447 | 2.151224e-49 | -8.615850e-47 |
| Msa0523430 | Msa1445910 | 0.850159 | 2.033785e-60 | -8.615850e-47 |
| Msa0523430 | Msa1457390 | 0.831300 | 1.805482e-55 | -8.615850e-47 |
| Msa0523430 | Msa1459130 | 0.806921 | 6.502546e-50 | -8.615850e-47 |
| Msa0523430 | Msa1462680 | 0.800947 | 1.134924e-48 | -8.615850e-47 |
| Msa0523430 | Msa1464090 | -0.804216 | 2.402396e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523430 | MtrunA17_Chr3g0143911 | 99.797 | 492 | 1 | 0 | 1 | 492 | 1 | 492 | 0.0 | 1028 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523430 | AT4G35090.1 | 87.398 | 492 | 62 | 0 | 1 | 492 | 1 | 492 | 0.0 | 920 |
| Msa0523430 | AT4G35090.3 | 87.090 | 488 | 63 | 0 | 5 | 492 | 5 | 492 | 0.0 | 910 |
| Msa0523430 | AT1G20630.1 | 85.569 | 492 | 71 | 0 | 1 | 492 | 1 | 492 | 0.0 | 895 |
| Msa0523430 | AT4G35090.2 | 87.553 | 474 | 59 | 0 | 1 | 474 | 1 | 474 | 0.0 | 889 |
| Msa0523430 | AT1G20620.1 | 78.455 | 492 | 106 | 0 | 1 | 492 | 1 | 492 | 0.0 | 843 |
| Msa0523430 | AT1G20620.6 | 78.234 | 487 | 106 | 0 | 6 | 492 | 65 | 551 | 0.0 | 833 |
| Msa0523430 | AT1G20620.5 | 77.033 | 492 | 106 | 1 | 1 | 492 | 1 | 485 | 0.0 | 822 |
| Msa0523430 | AT1G20620.2 | 78.282 | 419 | 91 | 0 | 1 | 419 | 1 | 419 | 0.0 | 715 |
| Msa0523430 | AT1G20620.4 | 76.393 | 377 | 89 | 0 | 116 | 492 | 1 | 377 | 0.0 | 637 |
| Msa0523430 | AT1G20620.7 | 77.818 | 275 | 61 | 0 | 116 | 390 | 1 | 275 | 7.34e-167 | 473 |
Find 188 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGGGTCTCTCAAGGTTTC+AGG | 0.120854 | 3_4:-76761555 | None:intergenic |
| AACATGAGGCCTAGCATTTA+AGG | 0.173184 | 3_4:+76764026 | Msa0523430:CDS |
| GCGCTTACAATTCTCCTTTC+TGG | 0.174679 | 3_4:+76760226 | Msa0523430:CDS |
| GAGAACATGTGAAGACTTTC+TGG | 0.177485 | 3_4:-76762302 | None:intergenic |
| ACTACATCTGACGTTATATT+AGG | 0.208614 | 3_4:+76764368 | Msa0523430:three_prime_UTR |
| ACTTATCAATGCAATCAATT+TGG | 0.222368 | 3_4:-76764319 | None:intergenic |
| GGATCCGTTCCCTATCAAAT+TGG | 0.267128 | 3_4:-76761374 | None:intergenic |
| GTTGGATCCTCCCACCTTAA+TGG | 0.271983 | 3_4:-76762483 | None:intergenic |
| CTTTCCCAGCCTTGTTGATC+AGG | 0.273529 | 3_4:-76762397 | None:intergenic |
| AATGCAATCAATTTGGTTTA+CGG | 0.280504 | 3_4:-76764312 | None:intergenic |
| TGTTTGTTTGGATAATTTAA+AGG | 0.280785 | 3_4:+76764109 | Msa0523430:three_prime_UTR |
| TATAGGCACATGGATGGTTT+TGG | 0.286155 | 3_4:+76762359 | Msa0523430:CDS |
| ATTCTCCTGGATGTGGGACT+TGG | 0.295541 | 3_4:-76762249 | None:intergenic |
| CTGGCATGGACAACACGTTC+TGG | 0.317458 | 3_4:-76761396 | None:intergenic |
| TGGATGTGGGACTTGGGGTT+GGG | 0.323157 | 3_4:-76762242 | None:intergenic |
| TTAAGAGCATGGACCATATC+TGG | 0.327136 | 3_4:-76762218 | None:intergenic |
| TTCTCCTGGATGTGGGACTT+GGG | 0.330541 | 3_4:-76762248 | None:intergenic |
| CTGGATGTGGGACTTGGGGT+TGG | 0.333029 | 3_4:-76762243 | None:intergenic |
| GCAGGAAGTTGCAGATAGTT+TGG | 0.333290 | 3_4:-76762836 | None:intergenic |
| TGCTTGAAGTTGTTCTGCTT+TGG | 0.342575 | 3_4:-76763639 | None:intergenic |
| CTCCTTCCTGTTTGATGATG+TGG | 0.344839 | 3_4:+76762322 | Msa0523430:CDS |
| CAGGGTAACTTTGACCTTGT+TGG | 0.356144 | 3_4:+76762152 | Msa0523430:intron |
| CCTTTCTGGACTACAAATTC+CGG | 0.359209 | 3_4:+76760240 | Msa0523430:CDS |
| TTCATTAATTTCTACCTCTC+TGG | 0.360898 | 3_4:-76761601 | None:intergenic |
| TATGATAAAGGATGTTTGTT+TGG | 0.363957 | 3_4:+76764097 | Msa0523430:three_prime_UTR |
| CCCATGAAATCCGCAGCATC+TGG | 0.368012 | 3_4:+76763838 | Msa0523430:CDS |
| CAAATTCCGGTGCACCTGTT+TGG | 0.371503 | 3_4:+76760253 | Msa0523430:CDS |
| ACCCTTTGCACTTGCTCCCC+TGG | 0.372101 | 3_4:-76761415 | None:intergenic |
| CTGGAGAGCGATACCGATCT+TGG | 0.372596 | 3_4:+76763664 | Msa0523430:CDS |
| AAAAGCTTGCCCAATTTGAT+AGG | 0.374612 | 3_4:+76761364 | Msa0523430:CDS |
| AGTCCCACATCCAGGAGAAT+TGG | 0.375895 | 3_4:+76762252 | Msa0523430:CDS |
| CTGTCTTCTTCGTTCATGAC+GGG | 0.379692 | 3_4:+76762186 | Msa0523430:CDS |
| TGATAATCTTCCAAGAGAAT+TGG | 0.382249 | 3_4:-76761333 | None:intergenic |
| TTTGGCAGGTCCAATTCTCT+TGG | 0.391620 | 3_4:+76761323 | Msa0523430:intron |
| TCCAGATGCTGCGGATTTCA+TGG | 0.392167 | 3_4:-76763839 | None:intergenic |
| GTTGGAGGAAGAGGCCATTA+AGG | 0.394703 | 3_4:+76762469 | Msa0523430:CDS |
| TCAAATTTGTCTTCGTGAGC+AGG | 0.405045 | 3_4:-76762590 | None:intergenic |
| CGGTGGAGAAGAAGAAGAAA+TGG | 0.408470 | 3_4:-76759968 | None:intergenic |
| CTACATCTGACGTTATATTA+GGG | 0.413036 | 3_4:+76764369 | Msa0523430:three_prime_UTR |
| TTGCACTTGCTCCCCTGGCA+TGG | 0.415695 | 3_4:-76761410 | None:intergenic |
| TCCTTCCTGTTTGATGATGT+GGG | 0.418017 | 3_4:+76762323 | Msa0523430:CDS |
| GATGAGTTGTTGTTCCAAAC+AGG | 0.420786 | 3_4:-76760267 | None:intergenic |
| TGGGTGTCCCACAAGATTAT+AGG | 0.422410 | 3_4:+76762342 | Msa0523430:CDS |
| CCTTCAGCCCGTAGGTCGCC+TGG | 0.422999 | 3_4:+76762661 | Msa0523430:CDS |
| AATTTCAACATCTGCAACTC+TGG | 0.423648 | 3_4:-76764073 | None:intergenic |
| TGTCCTGCCATTATTGTGCC+TGG | 0.427513 | 3_4:+76762737 | Msa0523430:CDS |
| GTATTGTTGTATACCTTGTA+TGG | 0.430027 | 3_4:-76760029 | None:intergenic |
| CCTGTCTTCTTCGTTCATGA+CGG | 0.433221 | 3_4:+76762185 | Msa0523430:CDS |
| ATTGTTGTGGTGAGCACACT+TGG | 0.434174 | 3_4:-76762867 | None:intergenic |
| GTAATAGTAGAGAGAAAGGA+TGG | 0.437046 | 3_4:-76759995 | None:intergenic |
| GCAGATTTCCTACGAGCTCC+TGG | 0.438797 | 3_4:+76761477 | Msa0523430:CDS |
| AGGTCAATTACTTCCCTTCA+AGG | 0.445115 | 3_4:+76763082 | Msa0523430:intron |
| CTTGGAAGATTATCATCTTG+TGG | 0.451741 | 3_4:+76761341 | Msa0523430:CDS |
| ACCTCTAGATCCAACGGTTA+GGG | 0.454007 | 3_4:-76760289 | None:intergenic |
| ATATACACCAGGCACAATAA+TGG | 0.457625 | 3_4:-76762744 | None:intergenic |
| ATGCAGGCTGATCGTTCTCT+TGG | 0.464966 | 3_4:+76763981 | Msa0523430:intron |
| TTCTCCAATTCTCCTGGATG+TGG | 0.467363 | 3_4:-76762256 | None:intergenic |
| CAAGGATTCTCCAATTCTCC+TGG | 0.469085 | 3_4:-76762262 | None:intergenic |
| CCATGTGCCTATAATCTTGT+GGG | 0.470182 | 3_4:-76762349 | None:intergenic |
| GAGGGTCTCTCAAGGTTTCA+GGG | 0.471242 | 3_4:-76761554 | None:intergenic |
| GTTGGTAATAGTAGAGAGAA+AGG | 0.471489 | 3_4:-76759999 | None:intergenic |
| TTTCTCTGCATGCCGTGAAA+AGG | 0.473118 | 3_4:+76763152 | Msa0523430:CDS |
| TACCTCTAGATCCAACGGTT+AGG | 0.473805 | 3_4:-76760290 | None:intergenic |
| AAGATAGATTTCTCCGCAGA+TGG | 0.473911 | 3_4:+76763787 | Msa0523430:CDS |
| CAAGATCGGTATCGCTCTCC+AGG | 0.473917 | 3_4:-76763663 | None:intergenic |
| CTGGATCTCATACTGGTCTC+AGG | 0.475961 | 3_4:+76763857 | Msa0523430:CDS |
| GTTTCATGAATTTCATTCAC+AGG | 0.477320 | 3_4:+76762900 | Msa0523430:CDS |
| TGGCATGGACAACACGTTCT+GGG | 0.477969 | 3_4:-76761395 | None:intergenic |
| CAGAACGTGTTGTCCATGCC+AGG | 0.477991 | 3_4:+76761397 | Msa0523430:CDS |
| TCCTGTTCGTCATGCAGAAA+AGG | 0.478892 | 3_4:+76763110 | Msa0523430:CDS |
| ATGTTGAAATTGTATGATAA+AGG | 0.480801 | 3_4:+76764085 | Msa0523430:three_prime_UTR |
| CGAACAGGATCATGCCTTGA+AGG | 0.481337 | 3_4:-76763096 | None:intergenic |
| CTATGTTCTTGTTCAAGACC+AGG | 0.484090 | 3_4:-76762679 | None:intergenic |
| GTGTGTGTTATTTATATATG+AGG | 0.485036 | 3_4:+76759890 | Msa0523430:five_prime_UTR |
| CAGAACAACTTCAAGCAGCC+TGG | 0.486042 | 3_4:+76763645 | Msa0523430:CDS |
| GATCCGTTCCCTATCAAATT+GGG | 0.489050 | 3_4:-76761373 | None:intergenic |
| TCTCCTGGATGTGGGACTTG+GGG | 0.492998 | 3_4:-76762247 | None:intergenic |
| TTTCCCAGCCTTGTTGATCA+GGG | 0.494239 | 3_4:-76762396 | None:intergenic |
| GAAAGGAGAATTGTAAGCGC+TGG | 0.495605 | 3_4:-76760223 | None:intergenic |
| TTATATTAGGGAGGAAAGTA+AGG | 0.497358 | 3_4:+76764381 | Msa0523430:three_prime_UTR |
| GTAGGAAATCTGCACAAGTC+AGG | 0.497677 | 3_4:-76761467 | None:intergenic |
| GAGAAATTAGCAGTAGGAAT+GGG | 0.501006 | 3_4:-76763135 | None:intergenic |
| CAGGCGACCTACGGGCTGAA+GGG | 0.503163 | 3_4:-76762660 | None:intergenic |
| GTTCAAGACCAGGCGACCTA+CGG | 0.504173 | 3_4:-76762669 | None:intergenic |
| TGGGGTTGGGTTTAAGAGCA+TGG | 0.506473 | 3_4:-76762229 | None:intergenic |
| CAGCAGCAATTGAATCATAC+AGG | 0.508681 | 3_4:-76762526 | None:intergenic |
| TCGCAACAACCTTAAATGCT+AGG | 0.510006 | 3_4:-76764035 | None:intergenic |
| GGACACCCACATCATCAAAC+AGG | 0.511274 | 3_4:-76762328 | None:intergenic |
| ACCGATCTTGGGCACCCGAC+AGG | 0.511670 | 3_4:+76763676 | Msa0523430:CDS |
| CAGTGTACGTGAAATTTCAC+TGG | 0.512177 | 3_4:+76762420 | Msa0523430:CDS |
| GCACACTTGGGAGCATTAGC+AGG | 0.512211 | 3_4:-76762854 | None:intergenic |
| ACCTGTCGGGTGCCCAAGAT+CGG | 0.512897 | 3_4:-76763677 | None:intergenic |
| GCAGCATCTGGATCTCATAC+TGG | 0.513786 | 3_4:+76763850 | Msa0523430:CDS |
| ATGACAGGTGTCTGAACTCC+AGG | 0.514052 | 3_4:-76761495 | None:intergenic |
| TAGAGAGAAAGGATGGAGGA+CGG | 0.516706 | 3_4:-76759988 | None:intergenic |
| GTATACCTTGTATGGATCCA+TGG | 0.516916 | 3_4:-76760021 | None:intergenic |
| TATTCCCTGATCAACAAGGC+TGG | 0.522948 | 3_4:+76762392 | Msa0523430:CDS |
| TTCAAGACCAGGCGACCTAC+GGG | 0.524652 | 3_4:-76762668 | None:intergenic |
| CAAGTCTTAGTTACATCAAG+TGG | 0.525209 | 3_4:-76762620 | None:intergenic |
| TTGAGTAGCATGGCTGTGGT+TGG | 0.529136 | 3_4:-76762501 | None:intergenic |
| GATTCACAGAGGCACAGACT+TGG | 0.529651 | 3_4:+76762812 | Msa0523430:CDS |
| TGGAGAGCGATACCGATCTT+GGG | 0.535088 | 3_4:+76763665 | Msa0523430:CDS |
| CGGATTTCATGGGTGACGCG+TGG | 0.535385 | 3_4:-76763828 | None:intergenic |
| CAACCCCAAGTCCCACATCC+AGG | 0.536425 | 3_4:+76762244 | Msa0523430:CDS |
| AGAGAAATTAGCAGTAGGAA+TGG | 0.536458 | 3_4:-76763136 | None:intergenic |
| AGAGAAAGGATGGAGGACGG+TGG | 0.539677 | 3_4:-76759985 | None:intergenic |
| CCAGGCGACCTACGGGCTGA+AGG | 0.540862 | 3_4:-76762661 | None:intergenic |
| GTAGAGAAACGCACAATGAC+AGG | 0.540987 | 3_4:-76761510 | None:intergenic |
| TCCATGTGCCTATAATCTTG+TGG | 0.541036 | 3_4:-76762350 | None:intergenic |
| CACTTGATGTAACTAAGACT+TGG | 0.542839 | 3_4:+76762621 | Msa0523430:CDS |
| CTCTCTACTATTACCAACCA+TGG | 0.543386 | 3_4:+76760004 | Msa0523430:exon |
| CTGTATGATTCAATTGCTGC+TGG | 0.545137 | 3_4:+76762527 | Msa0523430:CDS |
| TGAAGGGGTATAATGTCCTC+AGG | 0.545718 | 3_4:-76762644 | None:intergenic |
| GCCAGGGGAGCAAGTGCAAA+GGG | 0.546598 | 3_4:+76761414 | Msa0523430:CDS |
| AGCTCAACGAGTCACGTACA+TGG | 0.546903 | 3_4:-76764180 | None:intergenic |
| AAAGCTTGCCCAATTTGATA+GGG | 0.548471 | 3_4:+76761365 | Msa0523430:CDS |
| TCTCCAATTCTCCTGGATGT+GGG | 0.550324 | 3_4:-76762255 | None:intergenic |
| TGCCAGGGGAGCAAGTGCAA+AGG | 0.551070 | 3_4:+76761413 | Msa0523430:CDS |
| CCAGATGCTGCGGATTTCAT+GGG | 0.552199 | 3_4:-76763838 | None:intergenic |
| GAAGTGTCTGTTGGAGGAAG+AGG | 0.554768 | 3_4:+76762460 | Msa0523430:CDS |
| CCGTCATGAACGAAGAAGAC+AGG | 0.555643 | 3_4:-76762185 | None:intergenic |
| TTTCATTCACAGGGATGAAG+AGG | 0.555667 | 3_4:+76762910 | Msa0523430:CDS |
| TCCCTAACCGTTGGATCTAG+AGG | 0.556180 | 3_4:+76760288 | Msa0523430:CDS |
| TTGCCCAATTTGATAGGGAA+CGG | 0.556792 | 3_4:+76761370 | Msa0523430:CDS |
| ATAGTAGAGAGAAAGGATGG+AGG | 0.562175 | 3_4:-76759992 | None:intergenic |
| GTTGTTCCAAACAGGTGCAC+CGG | 0.562996 | 3_4:-76760259 | None:intergenic |
| AGGCGACCTACGGGCTGAAG+GGG | 0.563132 | 3_4:-76762659 | None:intergenic |
| AACAACTCATCCCTAACCGT+TGG | 0.569919 | 3_4:+76760279 | Msa0523430:CDS |
| GGAGAATTGTAAGCGCTGGA+TGG | 0.570856 | 3_4:-76760219 | None:intergenic |
| AATTGTAAGCGCTGGATGGA+CGG | 0.572978 | 3_4:-76760215 | None:intergenic |
| ATTCACAGAGGCACAGACTT+GGG | 0.574309 | 3_4:+76762813 | Msa0523430:CDS |
| ATTCCCTGATCAACAAGGCT+GGG | 0.574864 | 3_4:+76762393 | Msa0523430:CDS |
| GAAAGTGAGAAAAGAAGTCA+AGG | 0.576589 | 3_4:-76762280 | None:intergenic |
| ACCTTGTATGGATCCATGGT+TGG | 0.577182 | 3_4:-76760017 | None:intergenic |
| CCGGAATTTGTAGTCCAGAA+AGG | 0.579292 | 3_4:-76760240 | None:intergenic |
| GGATTTCATGGGTGACGCGT+GGG | 0.579795 | 3_4:-76763827 | None:intergenic |
| ATGTGGTGTGAAGTGTCTGT+TGG | 0.580105 | 3_4:+76762451 | Msa0523430:CDS |
| GAACAGGATCATGCCTTGAA+GGG | 0.580459 | 3_4:-76763095 | None:intergenic |
| GGAGGAAGAGGCCATTAAGG+TGG | 0.581156 | 3_4:+76762472 | Msa0523430:CDS |
| ACCAACCATGGATCCATACA+AGG | 0.581655 | 3_4:+76760016 | Msa0523430:exon |
| TTCATGGGTGACGCGTGGGT+CGG | 0.582291 | 3_4:-76763823 | None:intergenic |
| TGAACAAACAGTTTCCACTC+AGG | 0.583241 | 3_4:-76762557 | None:intergenic |
| AGATAGATTTCTCCGCAGAT+GGG | 0.587386 | 3_4:+76763788 | Msa0523430:CDS |
| CAGACACTTCACACCACATG+TGG | 0.589761 | 3_4:-76762447 | None:intergenic |
| CAAGATTATAGGCACATGGA+TGG | 0.589982 | 3_4:+76762353 | Msa0523430:CDS |
| TAGATTTCTCCGCAGATGGG+TGG | 0.591794 | 3_4:+76763791 | Msa0523430:CDS |
| GAGGAAGAGGCCATTAAGGT+GGG | 0.593020 | 3_4:+76762473 | Msa0523430:CDS |
| TTGCATCTCATCTGAACATG+AGG | 0.594906 | 3_4:+76764012 | Msa0523430:CDS |
| CAGGAAAGTTGTTTCCAACA+AGG | 0.596437 | 3_4:-76762166 | None:intergenic |
| GGTCTTGAGTAGCATGGCTG+TGG | 0.596746 | 3_4:-76762505 | None:intergenic |
| CCCACAAGATTATAGGCACA+TGG | 0.598312 | 3_4:+76762349 | Msa0523430:CDS |
| TGGTGTGAAGTGTCTGTTGG+AGG | 0.598470 | 3_4:+76762454 | Msa0523430:CDS |
| AGAACGTGTTGTCCATGCCA+GGG | 0.598996 | 3_4:+76761398 | Msa0523430:CDS |
| TTTCATGAATTTCATTCACA+GGG | 0.601023 | 3_4:+76762901 | Msa0523430:CDS |
| GAACGTGTTGTCCATGCCAG+GGG | 0.604058 | 3_4:+76761399 | Msa0523430:CDS |
| ACACCAGGCACAATAATGGC+AGG | 0.606260 | 3_4:-76762740 | None:intergenic |
| AAAACCTCGAGGGTCTCTCA+AGG | 0.607779 | 3_4:-76761562 | None:intergenic |
| ATGATAAGATGCTTCAAACC+AGG | 0.609656 | 3_4:+76762774 | Msa0523430:CDS |
| CACATATTCCCTGATCAACA+AGG | 0.618103 | 3_4:+76762388 | Msa0523430:CDS |
| ATCAGCATAAGAGAAAATCC+TGG | 0.623303 | 3_4:-76762792 | None:intergenic |
| ATTATACCCCTTCAGCCCGT+AGG | 0.626812 | 3_4:+76762653 | Msa0523430:CDS |
| ATTTCACAGCAAAACCTCGA+GGG | 0.627533 | 3_4:-76761572 | None:intergenic |
| AGATATACCTCTAGATCCAA+CGG | 0.631010 | 3_4:-76760295 | None:intergenic |
| TTGTTGTGGTGAGCACACTT+GGG | 0.632968 | 3_4:-76762866 | None:intergenic |
| CATGCAGAGAAATTAGCAGT+AGG | 0.633318 | 3_4:-76763141 | None:intergenic |
| TGAAATTCATGAAACCCTCA+TGG | 0.640371 | 3_4:-76762892 | None:intergenic |
| TCTGAACTCCAGGAGCTCGT+AGG | 0.643310 | 3_4:-76761485 | None:intergenic |
| TGTGCCTGGTGTATATTACT+CGG | 0.653190 | 3_4:+76762751 | Msa0523430:CDS |
| CATACAGGTCTTGAGTAGCA+TGG | 0.654493 | 3_4:-76762511 | None:intergenic |
| TTTCACTGGAAGCCCACATG+TGG | 0.658894 | 3_4:+76762434 | Msa0523430:CDS |
| AAGTCTTAGTTACATCAAGT+GGG | 0.661737 | 3_4:-76762619 | None:intergenic |
| AACCCTCATGGTGATTGTTG+TGG | 0.663659 | 3_4:-76762880 | None:intergenic |
| CACCACAACAATCACCATGA+GGG | 0.667620 | 3_4:+76762878 | Msa0523430:CDS |
| TCTACTGTCATTCATGAACG+TGG | 0.669221 | 3_4:+76761528 | Msa0523430:CDS |
| CATCTGACGTTATATTAGGG+AGG | 0.672089 | 3_4:+76764372 | Msa0523430:three_prime_UTR |
| ACCCACATCATCAAACAGGA+AGG | 0.673105 | 3_4:-76762324 | None:intergenic |
| ATAAAGCATCCACCCATCTG+CGG | 0.685814 | 3_4:-76763800 | None:intergenic |
| AGTATGAGATCCAGATGCTG+CGG | 0.691680 | 3_4:-76763848 | None:intergenic |
| AATTTCACAGCAAAACCTCG+AGG | 0.694899 | 3_4:-76761573 | None:intergenic |
| CTGCTGGTAACTATCCTGAG+TGG | 0.697296 | 3_4:+76762543 | Msa0523430:CDS |
| AGACACTTCACACCACATGT+GGG | 0.702081 | 3_4:-76762446 | None:intergenic |
| TCATCCGAGTAATATACACC+AGG | 0.707390 | 3_4:-76762755 | None:intergenic |
| GAAGAGGCCATTAAGGTGGG+AGG | 0.707656 | 3_4:+76762476 | Msa0523430:CDS |
| TCTCTTATGCTGATTCACAG+AGG | 0.708120 | 3_4:+76762801 | Msa0523430:CDS |
| TCACCACAACAATCACCATG+AGG | 0.719886 | 3_4:+76762877 | Msa0523430:CDS |
| TGTAACTAAGACTTGGCCTG+AGG | 0.723437 | 3_4:+76762628 | Msa0523430:CDS |
| GAAACCTTGAGAGACCCTCG+AGG | 0.734649 | 3_4:+76761558 | Msa0523430:CDS |
| TGTGAAATTCTACACCAGAG+AGG | 0.748378 | 3_4:+76761587 | Msa0523430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAATAATTTAAAGATA+TGG | - | chr3_4:76760377-76760396 | None:intergenic | 10.0% |
| !!! | ACAACATTTTTTTTTAAATA+AGG | - | chr3_4:76763273-76763292 | None:intergenic | 10.0% |
| !! | GAAAAAAGAAAAAAGAAAAT+AGG | + | chr3_4:76759846-76759865 | Msa0523430:five_prime_UTR | 15.0% |
| !! | TCAATAAATAAACAAAACTA+CGG | - | chr3_4:76760127-76760146 | None:intergenic | 15.0% |
| !!! | AATCTATCAATTTGTTTTTT+TGG | + | chr3_4:76760154-76760173 | Msa0523430:intron | 15.0% |
| !!! | TTTAACATAATTTGATTTCT+TGG | + | chr3_4:76760394-76760413 | Msa0523430:intron | 15.0% |
| !!! | TGTTTTCATAAACTATAATA+AGG | + | chr3_4:76760787-76760806 | Msa0523430:intron | 15.0% |
| !!! | GTTTTCATAAACTATAATAA+GGG | + | chr3_4:76760788-76760807 | Msa0523430:intron | 15.0% |
| !! | TTTAATTAAATGCTACATTT+GGG | - | chr3_4:76761797-76761816 | None:intergenic | 15.0% |
| !! | TAGCATTTAATTAAACAATT+TGG | + | chr3_4:76761802-76761821 | Msa0523430:intron | 15.0% |
| !!! | TAAGAATATTTCACAAATTT+TGG | - | chr3_4:76763323-76763342 | None:intergenic | 15.0% |
| !! | ATAAGTTGTTTATCCAAATA+TGG | - | chr3_4:76760550-76760569 | None:intergenic | 20.0% |
| !!! | TTATATTATTTTACCCCTTT+TGG | + | chr3_4:76761305-76761324 | Msa0523430:intron | 20.0% |
| !! | TTAATTAAATGCTACATTTG+GGG | - | chr3_4:76761796-76761815 | None:intergenic | 20.0% |
| !! | GTTTAATTAAATGCTACATT+TGG | - | chr3_4:76761798-76761817 | None:intergenic | 20.0% |
| !! | TTAATTAAACAATTTGGTCT+AGG | + | chr3_4:76761808-76761827 | Msa0523430:intron | 20.0% |
| !! | TAATTAAACAATTTGGTCTA+GGG | + | chr3_4:76761809-76761828 | Msa0523430:intron | 20.0% |
| !! | TTGAAATTTCAAAGTACAAA+GGG | - | chr3_4:76761909-76761928 | None:intergenic | 20.0% |
| !!! | TTTGAAATTTCAAAGTACAA+AGG | - | chr3_4:76761910-76761929 | None:intergenic | 20.0% |
| !!! | GACAATAATTGTTTTAAAAG+AGG | + | chr3_4:76762071-76762090 | Msa0523430:intron | 20.0% |
| !!! | TGCAAATTAATTTGAAGTTT+AGG | + | chr3_4:76763451-76763470 | Msa0523430:intron | 20.0% |
| !! | ATGTTGAAATTGTATGATAA+AGG | + | chr3_4:76764085-76764104 | Msa0523430:three_prime_UTR | 20.0% |
| !! | TGTTTGTTTGGATAATTTAA+AGG | + | chr3_4:76764109-76764128 | Msa0523430:three_prime_UTR | 20.0% |
| !!! | TTGCATTGATAAGTTTTATT+TGG | + | chr3_4:76764328-76764347 | Msa0523430:three_prime_UTR | 20.0% |
| !!! | TTGATAAGTTTTATTTGGTT+AGG | + | chr3_4:76764333-76764352 | Msa0523430:three_prime_UTR | 20.0% |
| ! | AAAATAGGAGAGTGAAAAAA+GGG | + | chr3_4:76759861-76759880 | Msa0523430:five_prime_UTR | 25.0% |
| !!! | GTGTGTGTTATTTATATATG+AGG | + | chr3_4:76759890-76759909 | Msa0523430:five_prime_UTR | 25.0% |
| ! | AAATATGCGCTTATAGTATA+AGG | + | chr3_4:76760524-76760543 | Msa0523430:intron | 25.0% |
| ! | TTATAGTATAAGGCCATATT+TGG | + | chr3_4:76760534-76760553 | Msa0523430:intron | 25.0% |
| ! | TGGTATATGATAGAATACTA+TGG | + | chr3_4:76760692-76760711 | Msa0523430:intron | 25.0% |
| ! | CAGTTATATCAAAAACAGTT+AGG | - | chr3_4:76760926-76760945 | None:intergenic | 25.0% |
| ! | TGATATAACTGAAGCTATAA+TGG | + | chr3_4:76760935-76760954 | Msa0523430:intron | 25.0% |
| ! | GATATAACTGAAGCTATAAT+GGG | + | chr3_4:76760936-76760955 | Msa0523430:intron | 25.0% |
| ! | GATTGTGTTGAAACTATTAT+CGG | - | chr3_4:76761742-76761761 | None:intergenic | 25.0% |
| ! | CTGTAATTATATTTAGTCAC+TGG | - | chr3_4:76761973-76761992 | None:intergenic | 25.0% |
| !!! | TTGTTTTAAAAGAGGTGATA+TGG | + | chr3_4:76762079-76762098 | Msa0523430:intron | 25.0% |
| ! | TTTCATGAATTTCATTCACA+GGG | + | chr3_4:76762901-76762920 | Msa0523430:CDS | 25.0% |
| !! | TATCACATTTAGAGTTATCA+TGG | - | chr3_4:76763001-76763020 | None:intergenic | 25.0% |
| ! | GAAGTAATTGACCTATAAAA+TGG | - | chr3_4:76763076-76763095 | None:intergenic | 25.0% |
| ! | AAAAATCTATGATCTTTCGT+TGG | + | chr3_4:76763356-76763375 | Msa0523430:intron | 25.0% |
| ! | TTAATATTTAACCAAGGTAG+TGG | - | chr3_4:76763426-76763445 | None:intergenic | 25.0% |
| ! | ACCTTGGTTAAATATTAAGT+TGG | + | chr3_4:76763428-76763447 | Msa0523430:intron | 25.0% |
| ! | ACCAACTTAATATTTAACCA+AGG | - | chr3_4:76763432-76763451 | None:intergenic | 25.0% |
| ! | TATAAAATAAATGACGAGTG+AGG | + | chr3_4:76763523-76763542 | Msa0523430:intron | 25.0% |
| ! | TATTGTTTAAACAGCTTTAC+TGG | - | chr3_4:76763564-76763583 | None:intergenic | 25.0% |
| ! | TGTTTAAACAATACCTGTAT+TGG | + | chr3_4:76763571-76763590 | Msa0523430:intron | 25.0% |
| ! | GTTTAAACAATACCTGTATT+GGG | + | chr3_4:76763572-76763591 | Msa0523430:intron | 25.0% |
| ! | TTTAAACAATACCTGTATTG+GGG | + | chr3_4:76763573-76763592 | Msa0523430:intron | 25.0% |
| !! | TCATATCAGTATTTTGTAAC+AGG | - | chr3_4:76763704-76763723 | None:intergenic | 25.0% |
| ! | TATGATAAAGGATGTTTGTT+TGG | + | chr3_4:76764097-76764116 | Msa0523430:three_prime_UTR | 25.0% |
| !! | AATGCAATCAATTTGGTTTA+CGG | - | chr3_4:76764315-76764334 | None:intergenic | 25.0% |
| ! | ACTTATCAATGCAATCAATT+TGG | - | chr3_4:76764322-76764341 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTATTTGGTTAGG+AGG | + | chr3_4:76764336-76764355 | Msa0523430:three_prime_UTR | 25.0% |
| GAAAATAGGAGAGTGAAAAA+AGG | + | chr3_4:76759860-76759879 | Msa0523430:five_prime_UTR | 30.0% | |
| AAATAGGAGAGTGAAAAAAG+GGG | + | chr3_4:76759862-76759881 | Msa0523430:five_prime_UTR | 30.0% | |
| GTATTGTTGTATACCTTGTA+TGG | - | chr3_4:76760032-76760051 | None:intergenic | 30.0% | |
| TAAACTGGAAAATGAAAGAG+CGG | - | chr3_4:76760457-76760476 | None:intergenic | 30.0% | |
| TGGATGTCATAACATTAAAC+TGG | - | chr3_4:76760472-76760491 | None:intergenic | 30.0% | |
| ! | GACATGTTATCTGTTTTCAT+AGG | + | chr3_4:76760845-76760864 | Msa0523430:intron | 30.0% |
| !! | TCGTACATGTGATACTTTTT+AGG | - | chr3_4:76760875-76760894 | None:intergenic | 30.0% |
| ATGTTATTATGAGCAGCTTA+TGG | + | chr3_4:76760999-76761018 | Msa0523430:intron | 30.0% | |
| AAGTTATGATATGTCACAAC+TGG | - | chr3_4:76761039-76761058 | None:intergenic | 30.0% | |
| GGCGTGGTTTATATAAAAAT+TGG | - | chr3_4:76761140-76761159 | None:intergenic | 30.0% | |
| TCGTAATTAGTTATCACCAT+TGG | + | chr3_4:76761191-76761210 | Msa0523430:intron | 30.0% | |
| TGTAAAGTTCAGGGTTAATT+TGG | + | chr3_4:76761250-76761269 | Msa0523430:intron | 30.0% | |
| TGATAATCTTCCAAGAGAAT+TGG | - | chr3_4:76761336-76761355 | None:intergenic | 30.0% | |
| TTCATTAATTTCTACCTCTC+TGG | - | chr3_4:76761604-76761623 | None:intergenic | 30.0% | |
| !!! | GTGTTGTCTTCAATTTTTTC+AGG | - | chr3_4:76761852-76761871 | None:intergenic | 30.0% |
| TATCTTTACCTTCTAATCAC+AGG | + | chr3_4:76762133-76762152 | Msa0523430:intron | 30.0% | |
| ATCTTTACCTTCTAATCACA+GGG | + | chr3_4:76762134-76762153 | Msa0523430:intron | 30.0% | |
| AAGTCTTAGTTACATCAAGT+GGG | - | chr3_4:76762622-76762641 | None:intergenic | 30.0% | |
| GTTTCATGAATTTCATTCAC+AGG | + | chr3_4:76762900-76762919 | Msa0523430:CDS | 30.0% | |
| ! | AATCGAAACTAACCTTTTCA+CGG | - | chr3_4:76763167-76763186 | None:intergenic | 30.0% |
| GCAATCAATCGTAAAAATCA+CGG | - | chr3_4:76763246-76763265 | None:intergenic | 30.0% | |
| !! | TTGGTTGTTTCTAAAATGTG+TGG | - | chr3_4:76763304-76763323 | None:intergenic | 30.0% |
| TGATCAACATGAATTGTGTT+TGG | + | chr3_4:76763721-76763740 | Msa0523430:intron | 30.0% | |
| !! | GTTTGGTGATGTCTAATATT+TGG | + | chr3_4:76763738-76763757 | Msa0523430:intron | 30.0% |
| ! | TTCTTTGCCTTAATCTTTTC+AGG | + | chr3_4:76763763-76763782 | Msa0523430:intron | 30.0% |
| TATCTTGCCTGAAAAGATTA+AGG | - | chr3_4:76763773-76763792 | None:intergenic | 30.0% | |
| AGCATATGAGCAAATAAGTA+GGG | - | chr3_4:76763945-76763964 | None:intergenic | 30.0% | |
| ACTACATCTGACGTTATATT+AGG | + | chr3_4:76764368-76764387 | Msa0523430:three_prime_UTR | 30.0% | |
| CTACATCTGACGTTATATTA+GGG | + | chr3_4:76764369-76764388 | Msa0523430:three_prime_UTR | 30.0% | |
| TTATATTAGGGAGGAAAGTA+AGG | + | chr3_4:76764381-76764400 | Msa0523430:three_prime_UTR | 30.0% | |
| GTAATAGTAGAGAGAAAGGA+TGG | - | chr3_4:76759998-76760017 | None:intergenic | 35.0% | |
| !! | GTTGGTAATAGTAGAGAGAA+AGG | - | chr3_4:76760002-76760021 | None:intergenic | 35.0% |
| AGATATACCTCTAGATCCAA+CGG | - | chr3_4:76760298-76760317 | None:intergenic | 35.0% | |
| CGATTTAGAGATCAATGAGT+TGG | + | chr3_4:76760672-76760691 | Msa0523430:intron | 35.0% | |
| AATAAGCTGAAAACAGCTCA+TGG | + | chr3_4:76760823-76760842 | Msa0523430:intron | 35.0% | |
| GCCACATTTAGTTGAGTATT+GGG | + | chr3_4:76761157-76761176 | Msa0523430:intron | 35.0% | |
| ! | CCACATTTAGTTGAGTATTG+GGG | + | chr3_4:76761158-76761177 | Msa0523430:intron | 35.0% |
| ! | CACCATTGGTAATTACAACT+TGG | + | chr3_4:76761205-76761224 | Msa0523430:intron | 35.0% |
| TGAACTTTACAACAGACAGA+TGG | - | chr3_4:76761241-76761260 | None:intergenic | 35.0% | |
| ATCTGTCTGTTGTAAAGTTC+AGG | + | chr3_4:76761240-76761259 | Msa0523430:intron | 35.0% | |
| TCTGTCTGTTGTAAAGTTCA+GGG | + | chr3_4:76761241-76761260 | Msa0523430:intron | 35.0% | |
| !! | ATTATTTTACCCCTTTTGGC+AGG | + | chr3_4:76761309-76761328 | Msa0523430:intron | 35.0% |
| CTTGGAAGATTATCATCTTG+TGG | + | chr3_4:76761341-76761360 | Msa0523430:CDS | 35.0% | |
| AAAAGCTTGCCCAATTTGAT+AGG | + | chr3_4:76761364-76761383 | Msa0523430:CDS | 35.0% | |
| AAAGCTTGCCCAATTTGATA+GGG | + | chr3_4:76761365-76761384 | Msa0523430:CDS | 35.0% | |
| TATTTAGTCGCTGGAAGATA+TGG | - | chr3_4:76761649-76761668 | None:intergenic | 35.0% | |
| TTAACCAACTCCAGTTTAGT+TGG | + | chr3_4:76761709-76761728 | Msa0523430:intron | 35.0% | |
| TTTACCAACTAAACTGGAGT+TGG | - | chr3_4:76761716-76761735 | None:intergenic | 35.0% | |
| AACAATTTGGTCTAGGGATT+TGG | + | chr3_4:76761815-76761834 | Msa0523430:intron | 35.0% | |
| AAAGTTACCCTGTGATTAGA+AGG | - | chr3_4:76762144-76762163 | None:intergenic | 35.0% | |
| GAAAGTGAGAAAAGAAGTCA+AGG | - | chr3_4:76762283-76762302 | None:intergenic | 35.0% | |
| CAAGTCTTAGTTACATCAAG+TGG | - | chr3_4:76762623-76762642 | None:intergenic | 35.0% | |
| CACTTGATGTAACTAAGACT+TGG | + | chr3_4:76762621-76762640 | Msa0523430:CDS | 35.0% | |
| ATATACACCAGGCACAATAA+TGG | - | chr3_4:76762747-76762766 | None:intergenic | 35.0% | |
| ATGATAAGATGCTTCAAACC+AGG | + | chr3_4:76762774-76762793 | Msa0523430:CDS | 35.0% | |
| ATCAGCATAAGAGAAAATCC+TGG | - | chr3_4:76762795-76762814 | None:intergenic | 35.0% | |
| TGAAATTCATGAAACCCTCA+TGG | - | chr3_4:76762895-76762914 | None:intergenic | 35.0% | |
| GAGAAATTAGCAGTAGGAAT+GGG | - | chr3_4:76763138-76763157 | None:intergenic | 35.0% | |
| AGAGAAATTAGCAGTAGGAA+TGG | - | chr3_4:76763139-76763158 | None:intergenic | 35.0% | |
| TGACAAAGAAGCAGAGAAAT+AGG | + | chr3_4:76763399-76763418 | Msa0523430:intron | 35.0% | |
| ! | ATTTTGTAACAGGAACCTGT+CGG | - | chr3_4:76763694-76763713 | None:intergenic | 35.0% |
| GAGCATATGAGCAAATAAGT+AGG | - | chr3_4:76763946-76763965 | None:intergenic | 35.0% | |
| TTTGCTCATATGCTCTTTGT+TGG | + | chr3_4:76763951-76763970 | Msa0523430:intron | 35.0% | |
| !!! | CTTTGTTGGTTTTACTATGC+AGG | + | chr3_4:76763965-76763984 | Msa0523430:intron | 35.0% |
| AATTTCAACATCTGCAACTC+TGG | - | chr3_4:76764076-76764095 | None:intergenic | 35.0% | |
| ATAGTAGAGAGAAAGGATGG+AGG | - | chr3_4:76759995-76760014 | None:intergenic | 40.0% | |
| CTCTCTACTATTACCAACCA+TGG | + | chr3_4:76760004-76760023 | Msa0523430:exon | 40.0% | |
| GTATACCTTGTATGGATCCA+TGG | - | chr3_4:76760024-76760043 | None:intergenic | 40.0% | |
| CCTTTCTGGACTACAAATTC+CGG | + | chr3_4:76760240-76760259 | Msa0523430:CDS | 40.0% | |
| ! | GATGAGTTGTTGTTCCAAAC+AGG | - | chr3_4:76760270-76760289 | None:intergenic | 40.0% |
| GACATCCATGCATGTGATTA+AGG | + | chr3_4:76760484-76760503 | Msa0523430:intron | 40.0% | |
| AAGAGCCTTAATCACATGCA+TGG | - | chr3_4:76760492-76760511 | None:intergenic | 40.0% | |
| TCAACTAAGCCTACACAAAC+AGG | + | chr3_4:76760900-76760919 | Msa0523430:intron | 40.0% | |
| AGCAATTGAGAGGGTTTACT+TGG | - | chr3_4:76761090-76761109 | None:intergenic | 40.0% | |
| ATACTCAACTAAATGTGGCG+TGG | - | chr3_4:76761156-76761175 | None:intergenic | 40.0% | |
| CGCCACATTTAGTTGAGTAT+TGG | + | chr3_4:76761156-76761175 | Msa0523430:intron | 40.0% | |
| CCCCAATACTCAACTAAATG+TGG | - | chr3_4:76761161-76761180 | None:intergenic | 40.0% | |
| CGCCAAGTTGTAATTACCAA+TGG | - | chr3_4:76761210-76761229 | None:intergenic | 40.0% | |
| TTGCCCAATTTGATAGGGAA+CGG | + | chr3_4:76761370-76761389 | Msa0523430:CDS | 40.0% | |
| GATCCGTTCCCTATCAAATT+GGG | - | chr3_4:76761376-76761395 | None:intergenic | 40.0% | |
| TCTACTGTCATTCATGAACG+TGG | + | chr3_4:76761528-76761547 | Msa0523430:CDS | 40.0% | |
| ATTTCACAGCAAAACCTCGA+GGG | - | chr3_4:76761575-76761594 | None:intergenic | 40.0% | |
| AATTTCACAGCAAAACCTCG+AGG | - | chr3_4:76761576-76761595 | None:intergenic | 40.0% | |
| TGTGAAATTCTACACCAGAG+AGG | + | chr3_4:76761587-76761606 | Msa0523430:CDS | 40.0% | |
| ! | CGGCATTTTACCAACTAAAC+TGG | - | chr3_4:76761722-76761741 | None:intergenic | 40.0% |
| ACAAAGGGTTTAGACAATGC+TGG | - | chr3_4:76761894-76761913 | None:intergenic | 40.0% | |
| AAGTAGTTGCAGTTGTAACC+AGG | + | chr3_4:76762024-76762043 | Msa0523430:intron | 40.0% | |
| AAGCAAATACACAAGCATCC+TGG | - | chr3_4:76762045-76762064 | None:intergenic | 40.0% | |
| AAGAGGTGATATGGAACAGT+TGG | + | chr3_4:76762088-76762107 | Msa0523430:intron | 40.0% | |
| ! | CAGGAAAGTTGTTTCCAACA+AGG | - | chr3_4:76762169-76762188 | None:intergenic | 40.0% |
| ! | CGGGATGAATTTTCCAGATA+TGG | + | chr3_4:76762205-76762224 | Msa0523430:CDS | 40.0% |
| ! | TTAAGAGCATGGACCATATC+TGG | - | chr3_4:76762221-76762240 | None:intergenic | 40.0% |
| GAGAACATGTGAAGACTTTC+TGG | - | chr3_4:76762305-76762324 | None:intergenic | 40.0% | |
| !! | TCCTTCCTGTTTGATGATGT+GGG | + | chr3_4:76762323-76762342 | Msa0523430:CDS | 40.0% |
| CCATGTGCCTATAATCTTGT+GGG | - | chr3_4:76762352-76762371 | None:intergenic | 40.0% | |
| TCCATGTGCCTATAATCTTG+TGG | - | chr3_4:76762353-76762372 | None:intergenic | 40.0% | |
| CAAGATTATAGGCACATGGA+TGG | + | chr3_4:76762353-76762372 | Msa0523430:CDS | 40.0% | |
| ! | TATAGGCACATGGATGGTTT+TGG | + | chr3_4:76762359-76762378 | Msa0523430:CDS | 40.0% |
| CACATATTCCCTGATCAACA+AGG | + | chr3_4:76762388-76762407 | Msa0523430:CDS | 40.0% | |
| CAGTGTACGTGAAATTTCAC+TGG | + | chr3_4:76762420-76762439 | Msa0523430:CDS | 40.0% | |
| CAGCAGCAATTGAATCATAC+AGG | - | chr3_4:76762529-76762548 | None:intergenic | 40.0% | |
| CTGTATGATTCAATTGCTGC+TGG | + | chr3_4:76762527-76762546 | Msa0523430:CDS | 40.0% | |
| TGAACAAACAGTTTCCACTC+AGG | - | chr3_4:76762560-76762579 | None:intergenic | 40.0% | |
| TCAAATTTGTCTTCGTGAGC+AGG | - | chr3_4:76762593-76762612 | None:intergenic | 40.0% | |
| CTATGTTCTTGTTCAAGACC+AGG | - | chr3_4:76762682-76762701 | None:intergenic | 40.0% | |
| TGTGCCTGGTGTATATTACT+CGG | + | chr3_4:76762751-76762770 | Msa0523430:CDS | 40.0% | |
| TCATCCGAGTAATATACACC+AGG | - | chr3_4:76762758-76762777 | None:intergenic | 40.0% | |
| !! | TCTCTTATGCTGATTCACAG+AGG | + | chr3_4:76762801-76762820 | Msa0523430:CDS | 40.0% |
| TTTCATTCACAGGGATGAAG+AGG | + | chr3_4:76762910-76762929 | Msa0523430:CDS | 40.0% | |
| !!! | CTTGAGCTCTGCCATTTTAT+AGG | + | chr3_4:76763062-76763081 | Msa0523430:intron | 40.0% |
| AGGTCAATTACTTCCCTTCA+AGG | + | chr3_4:76763082-76763101 | Msa0523430:intron | 40.0% | |
| CATGCAGAGAAATTAGCAGT+AGG | - | chr3_4:76763144-76763163 | None:intergenic | 40.0% | |
| ATCGTAAAAATCACGGCTGA+TGG | - | chr3_4:76763239-76763258 | None:intergenic | 40.0% | |
| CATACATTCTTCCCCAATAC+AGG | - | chr3_4:76763587-76763606 | None:intergenic | 40.0% | |
| TGCTTGAAGTTGTTCTGCTT+TGG | - | chr3_4:76763642-76763661 | None:intergenic | 40.0% | |
| ! | TTTTGTAACAGGAACCTGTC+GGG | - | chr3_4:76763693-76763712 | None:intergenic | 40.0% |
| AAGATAGATTTCTCCGCAGA+TGG | + | chr3_4:76763787-76763806 | Msa0523430:CDS | 40.0% | |
| AGATAGATTTCTCCGCAGAT+GGG | + | chr3_4:76763788-76763807 | Msa0523430:CDS | 40.0% | |
| TTGCATCTCATCTGAACATG+AGG | + | chr3_4:76764012-76764031 | Msa0523430:CDS | 40.0% | |
| AACATGAGGCCTAGCATTTA+AGG | + | chr3_4:76764026-76764045 | Msa0523430:CDS | 40.0% | |
| TCGCAACAACCTTAAATGCT+AGG | - | chr3_4:76764038-76764057 | None:intergenic | 40.0% | |
| CATCTGACGTTATATTAGGG+AGG | + | chr3_4:76764372-76764391 | Msa0523430:three_prime_UTR | 40.0% | |
| CGGTGGAGAAGAAGAAGAAA+TGG | - | chr3_4:76759971-76759990 | None:intergenic | 45.0% | |
| TAGAGAGAAAGGATGGAGGA+CGG | - | chr3_4:76759991-76760010 | None:intergenic | 45.0% | |
| ACCAACCATGGATCCATACA+AGG | + | chr3_4:76760016-76760035 | Msa0523430:exon | 45.0% | |
| ACCTTGTATGGATCCATGGT+TGG | - | chr3_4:76760020-76760039 | None:intergenic | 45.0% | |
| !! | AATTGTAAGCGCTGGATGGA+CGG | - | chr3_4:76760218-76760237 | None:intergenic | 45.0% |
| GAAAGGAGAATTGTAAGCGC+TGG | - | chr3_4:76760226-76760245 | None:intergenic | 45.0% | |
| GCGCTTACAATTCTCCTTTC+TGG | + | chr3_4:76760226-76760245 | Msa0523430:CDS | 45.0% | |
| CCGGAATTTGTAGTCCAGAA+AGG | - | chr3_4:76760243-76760262 | None:intergenic | 45.0% | |
| AACAACTCATCCCTAACCGT+TGG | + | chr3_4:76760279-76760298 | Msa0523430:CDS | 45.0% | |
| ACCTCTAGATCCAACGGTTA+GGG | - | chr3_4:76760292-76760311 | None:intergenic | 45.0% | |
| TACCTCTAGATCCAACGGTT+AGG | - | chr3_4:76760293-76760312 | None:intergenic | 45.0% | |
| CTTATCCCACTATGTGGAGT+CGG | - | chr3_4:76760737-76760756 | None:intergenic | 45.0% | |
| ! | ATAGTGGGATAAGGCTTGGT+TGG | + | chr3_4:76760744-76760763 | Msa0523430:intron | 45.0% |
| ACAGTTAGGCCTGTTTGTGT+AGG | - | chr3_4:76760912-76760931 | None:intergenic | 45.0% | |
| CACACATGCAGCAATTGAGA+GGG | - | chr3_4:76761099-76761118 | None:intergenic | 45.0% | |
| AGAATTGGACCTGCCAAAAG+GGG | - | chr3_4:76761321-76761340 | None:intergenic | 45.0% | |
| GAGAATTGGACCTGCCAAAA+GGG | - | chr3_4:76761322-76761341 | None:intergenic | 45.0% | |
| AGAGAATTGGACCTGCCAAA+AGG | - | chr3_4:76761323-76761342 | None:intergenic | 45.0% | |
| TTTGGCAGGTCCAATTCTCT+TGG | + | chr3_4:76761323-76761342 | Msa0523430:intron | 45.0% | |
| GGATCCGTTCCCTATCAAAT+TGG | - | chr3_4:76761377-76761396 | None:intergenic | 45.0% | |
| GTAGGAAATCTGCACAAGTC+AGG | - | chr3_4:76761470-76761489 | None:intergenic | 45.0% | |
| GTAGAGAAACGCACAATGAC+AGG | - | chr3_4:76761513-76761532 | None:intergenic | 45.0% | |
| CAGTAGCTGTATTTAGTCGC+TGG | - | chr3_4:76761658-76761677 | None:intergenic | 45.0% | |
| CAGGGTAACTTTGACCTTGT+TGG | + | chr3_4:76762152-76762171 | Msa0523430:intron | 45.0% | |
| CCTGTCTTCTTCGTTCATGA+CGG | + | chr3_4:76762185-76762204 | Msa0523430:CDS | 45.0% | |
| CTGTCTTCTTCGTTCATGAC+GGG | + | chr3_4:76762186-76762205 | Msa0523430:CDS | 45.0% | |
| TCTCCAATTCTCCTGGATGT+GGG | - | chr3_4:76762258-76762277 | None:intergenic | 45.0% | |
| TTCTCCAATTCTCCTGGATG+TGG | - | chr3_4:76762259-76762278 | None:intergenic | 45.0% | |
| CAAGGATTCTCCAATTCTCC+TGG | - | chr3_4:76762265-76762284 | None:intergenic | 45.0% | |
| !! | CTCCTTCCTGTTTGATGATG+TGG | + | chr3_4:76762322-76762341 | Msa0523430:CDS | 45.0% |
| ACCCACATCATCAAACAGGA+AGG | - | chr3_4:76762327-76762346 | None:intergenic | 45.0% | |
| TGGGTGTCCCACAAGATTAT+AGG | + | chr3_4:76762342-76762361 | Msa0523430:CDS | 45.0% | |
| CCCACAAGATTATAGGCACA+TGG | + | chr3_4:76762349-76762368 | Msa0523430:CDS | 45.0% | |
| TATTCCCTGATCAACAAGGC+TGG | + | chr3_4:76762392-76762411 | Msa0523430:CDS | 45.0% | |
| ATTCCCTGATCAACAAGGCT+GGG | + | chr3_4:76762393-76762412 | Msa0523430:CDS | 45.0% | |
| !! | TTTCCCAGCCTTGTTGATCA+GGG | - | chr3_4:76762399-76762418 | None:intergenic | 45.0% |
| AGACACTTCACACCACATGT+GGG | - | chr3_4:76762449-76762468 | None:intergenic | 45.0% | |
| ! | ATGTGGTGTGAAGTGTCTGT+TGG | + | chr3_4:76762451-76762470 | Msa0523430:CDS | 45.0% |
| CATACAGGTCTTGAGTAGCA+TGG | - | chr3_4:76762514-76762533 | None:intergenic | 45.0% | |
| TGTAACTAAGACTTGGCCTG+AGG | + | chr3_4:76762628-76762647 | Msa0523430:CDS | 45.0% | |
| ! | TGAAGGGGTATAATGTCCTC+AGG | - | chr3_4:76762647-76762666 | None:intergenic | 45.0% |
| ! | ATTCACAGAGGCACAGACTT+GGG | + | chr3_4:76762813-76762832 | Msa0523430:CDS | 45.0% |
| GCAGGAAGTTGCAGATAGTT+TGG | - | chr3_4:76762839-76762858 | None:intergenic | 45.0% | |
| TTGTTGTGGTGAGCACACTT+GGG | - | chr3_4:76762869-76762888 | None:intergenic | 45.0% | |
| ATTGTTGTGGTGAGCACACT+TGG | - | chr3_4:76762870-76762889 | None:intergenic | 45.0% | |
| TCACCACAACAATCACCATG+AGG | + | chr3_4:76762877-76762896 | Msa0523430:CDS | 45.0% | |
| CACCACAACAATCACCATGA+GGG | + | chr3_4:76762878-76762897 | Msa0523430:CDS | 45.0% | |
| AACCCTCATGGTGATTGTTG+TGG | - | chr3_4:76762883-76762902 | None:intergenic | 45.0% | |
| GAACAGGATCATGCCTTGAA+GGG | - | chr3_4:76763098-76763117 | None:intergenic | 45.0% | |
| TCCTGTTCGTCATGCAGAAA+AGG | + | chr3_4:76763110-76763129 | Msa0523430:CDS | 45.0% | |
| ! | ACCTTTTCTGCATGACGAAC+AGG | - | chr3_4:76763114-76763133 | None:intergenic | 45.0% |
| TTTCTCTGCATGCCGTGAAA+AGG | + | chr3_4:76763152-76763171 | Msa0523430:CDS | 45.0% | |
| GAGAAATAGGTCCACTACCT+TGG | + | chr3_4:76763412-76763431 | Msa0523430:intron | 45.0% | |
| ! | ATAAAGCATCCACCCATCTG+CGG | - | chr3_4:76763803-76763822 | None:intergenic | 45.0% |
| AGTATGAGATCCAGATGCTG+CGG | - | chr3_4:76763851-76763870 | None:intergenic | 45.0% | |
| !! | GGAGAATTGTAAGCGCTGGA+TGG | - | chr3_4:76760222-76760241 | None:intergenic | 50.0% |
| CAAATTCCGGTGCACCTGTT+TGG | + | chr3_4:76760253-76760272 | Msa0523430:CDS | 50.0% | |
| GTTGTTCCAAACAGGTGCAC+CGG | - | chr3_4:76760262-76760281 | None:intergenic | 50.0% | |
| TCCCTAACCGTTGGATCTAG+AGG | + | chr3_4:76760288-76760307 | Msa0523430:CDS | 50.0% | |
| ACTATGTGGAGTCGGCTACA+TGG | - | chr3_4:76760729-76760748 | None:intergenic | 50.0% | |
| ! | ATGTAGCCGACTCCACATAG+TGG | + | chr3_4:76760728-76760747 | Msa0523430:intron | 50.0% |
| ! | TGTAGCCGACTCCACATAGT+GGG | + | chr3_4:76760729-76760748 | Msa0523430:intron | 50.0% |
| ! | CGACTCCACATAGTGGGATA+AGG | + | chr3_4:76760735-76760754 | Msa0523430:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTATG+TGG | - | chr3_4:76760743-76760762 | None:intergenic | 50.0% |
| ! | CCACATAGTGGGATAAGGCT+TGG | + | chr3_4:76760740-76760759 | Msa0523430:intron | 50.0% |
| GCACACATGCAGCAATTGAG+AGG | - | chr3_4:76761100-76761119 | None:intergenic | 50.0% | |
| TGGCATGGACAACACGTTCT+GGG | - | chr3_4:76761398-76761417 | None:intergenic | 50.0% | |
| AGAACGTGTTGTCCATGCCA+GGG | + | chr3_4:76761398-76761417 | Msa0523430:CDS | 50.0% | |
| ATGACAGGTGTCTGAACTCC+AGG | - | chr3_4:76761498-76761517 | None:intergenic | 50.0% | |
| GAGGGTCTCTCAAGGTTTCA+GGG | - | chr3_4:76761557-76761576 | None:intergenic | 50.0% | |
| AAAACCTCGAGGGTCTCTCA+AGG | - | chr3_4:76761565-76761584 | None:intergenic | 50.0% | |
| CCGTCATGAACGAAGAAGAC+AGG | - | chr3_4:76762188-76762207 | None:intergenic | 50.0% | |
| TGGGGTTGGGTTTAAGAGCA+TGG | - | chr3_4:76762232-76762251 | None:intergenic | 50.0% | |
| TTCTCCTGGATGTGGGACTT+GGG | - | chr3_4:76762251-76762270 | None:intergenic | 50.0% | |
| ATTCTCCTGGATGTGGGACT+TGG | - | chr3_4:76762252-76762271 | None:intergenic | 50.0% | |
| AGTCCCACATCCAGGAGAAT+TGG | + | chr3_4:76762252-76762271 | Msa0523430:CDS | 50.0% | |
| GGACACCCACATCATCAAAC+AGG | - | chr3_4:76762331-76762350 | None:intergenic | 50.0% | |
| !! | CTTTCCCAGCCTTGTTGATC+AGG | - | chr3_4:76762400-76762419 | None:intergenic | 50.0% |
| TTTCACTGGAAGCCCACATG+TGG | + | chr3_4:76762434-76762453 | Msa0523430:CDS | 50.0% | |
| CAGACACTTCACACCACATG+TGG | - | chr3_4:76762450-76762469 | None:intergenic | 50.0% | |
| ! | TGGTGTGAAGTGTCTGTTGG+AGG | + | chr3_4:76762454-76762473 | Msa0523430:CDS | 50.0% |
| ! | GAAGTGTCTGTTGGAGGAAG+AGG | + | chr3_4:76762460-76762479 | Msa0523430:CDS | 50.0% |
| GTTGGAGGAAGAGGCCATTA+AGG | + | chr3_4:76762469-76762488 | Msa0523430:CDS | 50.0% | |
| GAGGAAGAGGCCATTAAGGT+GGG | + | chr3_4:76762473-76762492 | Msa0523430:CDS | 50.0% | |
| GTTGGATCCTCCCACCTTAA+TGG | - | chr3_4:76762486-76762505 | None:intergenic | 50.0% | |
| TTGAGTAGCATGGCTGTGGT+TGG | - | chr3_4:76762504-76762523 | None:intergenic | 50.0% | |
| CTGCTGGTAACTATCCTGAG+TGG | + | chr3_4:76762543-76762562 | Msa0523430:CDS | 50.0% | |
| ATTATACCCCTTCAGCCCGT+AGG | + | chr3_4:76762653-76762672 | Msa0523430:CDS | 50.0% | |
| TGTCCTGCCATTATTGTGCC+TGG | + | chr3_4:76762737-76762756 | Msa0523430:CDS | 50.0% | |
| ACACCAGGCACAATAATGGC+AGG | - | chr3_4:76762743-76762762 | None:intergenic | 50.0% | |
| ! | GATTCACAGAGGCACAGACT+TGG | + | chr3_4:76762812-76762831 | Msa0523430:CDS | 50.0% |
| CGAACAGGATCATGCCTTGA+AGG | - | chr3_4:76763099-76763118 | None:intergenic | 50.0% | |
| CAGAACAACTTCAAGCAGCC+TGG | + | chr3_4:76763645-76763664 | Msa0523430:CDS | 50.0% | |
| TGGAGAGCGATACCGATCTT+GGG | + | chr3_4:76763665-76763684 | Msa0523430:CDS | 50.0% | |
| TAGATTTCTCCGCAGATGGG+TGG | + | chr3_4:76763791-76763810 | Msa0523430:CDS | 50.0% | |
| CCAGATGCTGCGGATTTCAT+GGG | - | chr3_4:76763841-76763860 | None:intergenic | 50.0% | |
| TCCAGATGCTGCGGATTTCA+TGG | - | chr3_4:76763842-76763861 | None:intergenic | 50.0% | |
| GCAGCATCTGGATCTCATAC+TGG | + | chr3_4:76763850-76763869 | Msa0523430:CDS | 50.0% | |
| ! | CTGGATCTCATACTGGTCTC+AGG | + | chr3_4:76763857-76763876 | Msa0523430:CDS | 50.0% |
| ATGCAGGCTGATCGTTCTCT+TGG | + | chr3_4:76763981-76764000 | Msa0523430:intron | 50.0% | |
| AGCTCAACGAGTCACGTACA+TGG | - | chr3_4:76764183-76764202 | None:intergenic | 50.0% | |
| AGAGAAAGGATGGAGGACGG+TGG | - | chr3_4:76759988-76760007 | None:intergenic | 55.0% | |
| CTGGCATGGACAACACGTTC+TGG | - | chr3_4:76761399-76761418 | None:intergenic | 55.0% | |
| CAGAACGTGTTGTCCATGCC+AGG | + | chr3_4:76761397-76761416 | Msa0523430:CDS | 55.0% | |
| GAACGTGTTGTCCATGCCAG+GGG | + | chr3_4:76761399-76761418 | Msa0523430:CDS | 55.0% | |
| GCAGATTTCCTACGAGCTCC+TGG | + | chr3_4:76761477-76761496 | Msa0523430:CDS | 55.0% | |
| TCTGAACTCCAGGAGCTCGT+AGG | - | chr3_4:76761488-76761507 | None:intergenic | 55.0% | |
| CGAGGGTCTCTCAAGGTTTC+AGG | - | chr3_4:76761558-76761577 | None:intergenic | 55.0% | |
| GAAACCTTGAGAGACCCTCG+AGG | + | chr3_4:76761558-76761577 | Msa0523430:CDS | 55.0% | |
| TGGATGTGGGACTTGGGGTT+GGG | - | chr3_4:76762245-76762264 | None:intergenic | 55.0% | |
| TCTCCTGGATGTGGGACTTG+GGG | - | chr3_4:76762250-76762269 | None:intergenic | 55.0% | |
| GGAGGAAGAGGCCATTAAGG+TGG | + | chr3_4:76762472-76762491 | Msa0523430:CDS | 55.0% | |
| GAAGAGGCCATTAAGGTGGG+AGG | + | chr3_4:76762476-76762495 | Msa0523430:CDS | 55.0% | |
| GGTCTTGAGTAGCATGGCTG+TGG | - | chr3_4:76762508-76762527 | None:intergenic | 55.0% | |
| TTCAAGACCAGGCGACCTAC+GGG | - | chr3_4:76762671-76762690 | None:intergenic | 55.0% | |
| GTTCAAGACCAGGCGACCTA+CGG | - | chr3_4:76762672-76762691 | None:intergenic | 55.0% | |
| !! | GCACACTTGGGAGCATTAGC+AGG | - | chr3_4:76762857-76762876 | None:intergenic | 55.0% |
| CAAGATCGGTATCGCTCTCC+AGG | - | chr3_4:76763666-76763685 | None:intergenic | 55.0% | |
| CTGGAGAGCGATACCGATCT+TGG | + | chr3_4:76763664-76763683 | Msa0523430:CDS | 55.0% | |
| GGATTTCATGGGTGACGCGT+GGG | - | chr3_4:76763830-76763849 | None:intergenic | 55.0% | |
| CCCATGAAATCCGCAGCATC+TGG | + | chr3_4:76763838-76763857 | Msa0523430:CDS | 55.0% | |
| TTGCACTTGCTCCCCTGGCA+TGG | - | chr3_4:76761413-76761432 | None:intergenic | 60.0% | |
| TGCCAGGGGAGCAAGTGCAA+AGG | + | chr3_4:76761413-76761432 | Msa0523430:CDS | 60.0% | |
| GCCAGGGGAGCAAGTGCAAA+GGG | + | chr3_4:76761414-76761433 | Msa0523430:CDS | 60.0% | |
| ACCCTTTGCACTTGCTCCCC+TGG | - | chr3_4:76761418-76761437 | None:intergenic | 60.0% | |
| CTGGATGTGGGACTTGGGGT+TGG | - | chr3_4:76762246-76762265 | None:intergenic | 60.0% | |
| CAACCCCAAGTCCCACATCC+AGG | + | chr3_4:76762244-76762263 | Msa0523430:CDS | 60.0% | |
| ACCTGTCGGGTGCCCAAGAT+CGG | - | chr3_4:76763680-76763699 | None:intergenic | 60.0% | |
| TTCATGGGTGACGCGTGGGT+CGG | - | chr3_4:76763826-76763845 | None:intergenic | 60.0% | |
| CGGATTTCATGGGTGACGCG+TGG | - | chr3_4:76763831-76763850 | None:intergenic | 60.0% | |
| ! | AGGCGACCTACGGGCTGAAG+GGG | - | chr3_4:76762662-76762681 | None:intergenic | 65.0% |
| ! | CAGGCGACCTACGGGCTGAA+GGG | - | chr3_4:76762663-76762682 | None:intergenic | 65.0% |
| ACCGATCTTGGGCACCCGAC+AGG | + | chr3_4:76763676-76763695 | Msa0523430:CDS | 65.0% | |
| ! | CCAGGCGACCTACGGGCTGA+AGG | - | chr3_4:76762664-76762683 | None:intergenic | 70.0% |
| CCTTCAGCCCGTAGGTCGCC+TGG | + | chr3_4:76762661-76762680 | Msa0523430:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 76759831 | 76764424 | 76759831 | ID=Msa0523430;Name=Msa0523430 |
| chr3_4 | mRNA | 76759831 | 76764424 | 76759831 | ID=Msa0523430-mRNA-1;Parent=Msa0523430;Name=Msa0523430-mRNA-1;_AED=0.09;_eAED=0.09;_QI=192|1|1|1|1|1|8|378|492 |
| chr3_4 | exon | 76759831 | 76760037 | 76759831 | ID=Msa0523430-mRNA-1:exon:22342;Parent=Msa0523430-mRNA-1 |
| chr3_4 | exon | 76760213 | 76760309 | 76760213 | ID=Msa0523430-mRNA-1:exon:22343;Parent=Msa0523430-mRNA-1 |
| chr3_4 | exon | 76761331 | 76761608 | 76761331 | ID=Msa0523430-mRNA-1:exon:22344;Parent=Msa0523430-mRNA-1 |
| chr3_4 | exon | 76762155 | 76762931 | 76762155 | ID=Msa0523430-mRNA-1:exon:22345;Parent=Msa0523430-mRNA-1 |
| chr3_4 | exon | 76763084 | 76763173 | 76763084 | ID=Msa0523430-mRNA-1:exon:22346;Parent=Msa0523430-mRNA-1 |
| chr3_4 | exon | 76763630 | 76763697 | 76763630 | ID=Msa0523430-mRNA-1:exon:22347;Parent=Msa0523430-mRNA-1 |
| chr3_4 | exon | 76763785 | 76763878 | 76763785 | ID=Msa0523430-mRNA-1:exon:22348;Parent=Msa0523430-mRNA-1 |
| chr3_4 | exon | 76763987 | 76764424 | 76763987 | ID=Msa0523430-mRNA-1:exon:22349;Parent=Msa0523430-mRNA-1 |
| chr3_4 | five_prime_UTR | 76759831 | 76760022 | 76759831 | ID=Msa0523430-mRNA-1:five_prime_utr;Parent=Msa0523430-mRNA-1 |
| chr3_4 | CDS | 76760023 | 76760037 | 76760023 | ID=Msa0523430-mRNA-1:cds;Parent=Msa0523430-mRNA-1 |
| chr3_4 | CDS | 76760213 | 76760309 | 76760213 | ID=Msa0523430-mRNA-1:cds;Parent=Msa0523430-mRNA-1 |
| chr3_4 | CDS | 76761331 | 76761608 | 76761331 | ID=Msa0523430-mRNA-1:cds;Parent=Msa0523430-mRNA-1 |
| chr3_4 | CDS | 76762155 | 76762931 | 76762155 | ID=Msa0523430-mRNA-1:cds;Parent=Msa0523430-mRNA-1 |
| chr3_4 | CDS | 76763084 | 76763173 | 76763084 | ID=Msa0523430-mRNA-1:cds;Parent=Msa0523430-mRNA-1 |
| chr3_4 | CDS | 76763630 | 76763697 | 76763630 | ID=Msa0523430-mRNA-1:cds;Parent=Msa0523430-mRNA-1 |
| chr3_4 | CDS | 76763785 | 76763878 | 76763785 | ID=Msa0523430-mRNA-1:cds;Parent=Msa0523430-mRNA-1 |
| chr3_4 | CDS | 76763987 | 76764046 | 76763987 | ID=Msa0523430-mRNA-1:cds;Parent=Msa0523430-mRNA-1 |
| chr3_4 | three_prime_UTR | 76764047 | 76764424 | 76764047 | ID=Msa0523430-mRNA-1:three_prime_utr;Parent=Msa0523430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
