AlfalfaGEDB | Msa0220990

M. sativa cultivar zhongmu-4 / Msa0220990

KEGG: -
GO: GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0012505 GO:0031410 GO:0031982 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0097708
PFAM: PF00071.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0220990	XP_013465182.1	99.535	215	1	0	1	215	1	215	6.10e-155	438

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0220990	sp\|Q40521\|RB11B_TOBAC	81.429	210	39	0	5	214	8	217	3.23e-127	360

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0220990	G7ZUL4	99.535	215	1	0	1	215	1	215	2.91e-155	438

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0067590	Msa0220990	-0.804296	2.312116e-49	-8.615850e-47
Msa0105480	Msa0220990	-0.809370	1.957039e-50	-8.615850e-47
Msa0120880	Msa0220990	0.804837	1.783352e-49	-8.615850e-47
Msa0140770	Msa0220990	-0.832564	8.795820e-56	-8.615850e-47
Msa0179030	Msa0220990	0.820174	7.885573e-53	-8.615850e-47
Msa0202490	Msa0220990	0.801370	9.295569e-49	-8.615850e-47
Msa0209140	Msa0220990	0.818015	2.443948e-52	-8.615850e-47
Msa0217670	Msa0220990	0.802087	6.626471e-49	-8.615850e-47
Msa0220990	Msa0241830	0.813318	2.719516e-51	-8.615850e-47
Msa0220990	Msa0244970	0.802716	4.917114e-49	-8.615850e-47
Msa0220990	Msa0244980	0.816417	5.588854e-52	-8.615850e-47
Msa0220990	Msa0245580	0.824342	8.501619e-54	-8.615850e-47
Msa0220990	Msa0262440	0.825802	3.841993e-54	-8.615850e-47
Msa0220990	Msa0265250	0.809519	1.817808e-50	-8.615850e-47
Msa0220990	Msa0283420	0.801508	8.709933e-49	-8.615850e-47
Msa0220990	Msa0284180	0.816105	6.564728e-52	-8.615850e-47
Msa0220990	Msa0296250	0.807669	4.515171e-50	-8.615850e-47
Msa0220990	Msa0300280	0.870572	1.319136e-66	-8.615850e-47
Msa0220990	Msa0301520	0.800536	1.376153e-48	-8.615850e-47
Msa0220990	Msa0312640	0.831676	1.458381e-55	-8.615850e-47
Msa0220990	Msa0322900	0.808330	3.266557e-50	-8.615850e-47
Msa0220990	Msa0337710	0.868089	8.457913e-66	-8.615850e-47
Msa0220990	Msa0339020	0.806083	9.770515e-50	-8.615850e-47
Msa0220990	Msa0377820	0.821376	4.173331e-53	-8.615850e-47
Msa0220990	Msa0426580	0.804012	2.650109e-49	-8.615850e-47
Msa0220990	Msa0437020	0.812696	3.723898e-51	-8.615850e-47
Msa0220990	Msa0472930	0.824889	6.320256e-54	-8.615850e-47
Msa0220990	Msa0479760	-0.831311	1.793415e-55	-8.615850e-47
Msa0220990	Msa0519150	0.812547	4.012218e-51	-8.615850e-47
Msa0220990	Msa0617170	0.813699	2.242686e-51	-8.615850e-47
Msa0220990	Msa0693340	-0.829780	4.250128e-55	-8.615850e-47
Msa0220990	Msa0875910	0.816876	4.411730e-52	-8.615850e-47
Msa0220990	Msa0878860	0.815670	8.209890e-52	-8.615850e-47
Msa0220990	Msa0959520	0.819135	1.361791e-52	-8.615850e-47
Msa0220990	Msa0969380	0.831365	1.739393e-55	-8.615850e-47
Msa0220990	Msa0969590	0.807559	4.763505e-50	-8.615850e-47
Msa0220990	Msa0969720	0.827662	1.382284e-54	-8.615850e-47
Msa0220990	Msa1089220	0.831038	2.093385e-55	-8.615850e-47
Msa0220990	Msa1123350	0.837080	6.420023e-57	-8.615850e-47
Msa0220990	Msa1123770	0.812661	3.788560e-51	-8.615850e-47
Msa0220990	Msa1169910	0.811619	6.396008e-51	-8.615850e-47
Msa0220990	Msa1221630	0.814105	1.825331e-51	-8.615850e-47
Msa0220990	Msa1249600	0.812131	4.946534e-51	-8.615850e-47
Msa0220990	Msa1257570	0.804009	2.653322e-49	-8.615850e-47
Msa0220990	Msa1259730	0.804781	1.831983e-49	-8.615850e-47
Msa0220990	Msa1260220	0.802155	6.415443e-49	-8.615850e-47
Msa0220990	Msa1265020	0.815836	7.536977e-52	-8.615850e-47
Msa0220990	Msa1290900	0.805944	1.045202e-49	-8.615850e-47
Msa0220990	Msa1298100	0.812766	3.593240e-51	-8.615850e-47
Msa0220990	Msa1327870	0.821735	3.447048e-53	-8.615850e-47
Msa0220990	Msa1331300	0.823571	1.289054e-53	-8.615850e-47
Msa0220990	Msa1337850	0.855164	7.581904e-62	-8.615850e-47
Msa0220990	Msa1374170	0.810139	1.337057e-50	-8.615850e-47
Msa0220990	Msa1385720	0.814462	1.521730e-51	-8.615850e-47
Msa0220990	Msa1433870	0.855465	6.196283e-62	-8.615850e-47
Msa0220990	Msa1434090	0.816825	4.529032e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0220990	MtrunA17_Chr2g0325091	99.535	215	1	0	1	215	1	215	5.61e-159	438
Msa0220990	MtrunA17_Chr4g0046261	81.019	216	38	2	1	213	1	216	1.10e-128	361
Msa0220990	MtrunA17_Chr2g0283131	80.556	216	39	2	1	213	1	216	1.79e-128	361
Msa0220990	MtrunA17_Chr4g0040781	81.019	216	38	2	1	213	1	216	2.83e-128	360
Msa0220990	MtrunA17_Chr2g0315551	76.415	212	47	3	5	214	7	217	5.20e-118	334
Msa0220990	MtrunA17_Chr2g0319951	72.170	212	55	2	5	213	7	217	7.18e-108	308
Msa0220990	MtrunA17_Chr3g0112681	67.453	212	66	2	4	213	5	215	2.83e-102	294
Msa0220990	MtrunA17_Chr2g0276941	66.038	212	69	1	5	213	9	220	1.77e-101	293
Msa0220990	MtrunA17_Chr4g0032201	67.136	213	66	3	4	214	5	215	6.00e-101	291
Msa0220990	MtrunA17_Chr1g0174281	58.065	217	85	2	2	212	6	222	2.28e-89	262
Msa0220990	MtrunA17_Chr6g0482721	58.768	211	84	3	5	213	6	215	1.72e-87	257
Msa0220990	MtrunA17_Chr3g0123821	55.814	215	91	1	2	212	7	221	4.12e-86	254
Msa0220990	MtrunA17_Chr8g0381841	56.881	218	89	2	2	214	8	225	1.42e-85	252
Msa0220990	MtrunA17_Chr7g0231131	55.814	215	90	2	2	212	6	219	2.20e-85	252
Msa0220990	MtrunA17_Chr8g0346421	55.140	214	93	1	4	214	19	232	6.56e-81	241
Msa0220990	MtrunA17_Chr7g0275991	56.338	213	88	3	6	213	15	227	7.73e-81	241
Msa0220990	MtrunA17_Chr8g0392931	56.604	212	88	2	5	213	8	218	1.70e-79	237
Msa0220990	MtrunA17_Chr7g0214241	58.937	207	82	2	10	213	14	220	4.80e-79	236
Msa0220990	MtrunA17_Chr1g0189361	55.189	212	88	2	9	213	12	223	6.90e-77	230
Msa0220990	MtrunA17_Chr8g0351861	60.221	181	71	1	2	181	6	186	1.88e-75	227
Msa0220990	MtrunA17_Chr7g0234201	56.373	204	89	0	10	213	12	215	5.51e-75	225
Msa0220990	MtrunA17_Chr2g0290891	46.009	213	104	2	8	213	3	211	1.56e-61	191
Msa0220990	MtrunA17_Chr6g0458081	43.868	212	110	2	8	213	3	211	1.83e-58	183
Msa0220990	MtrunA17_Chr4g0055651	45.498	211	106	1	4	214	1	202	3.16e-58	182
Msa0220990	MtrunA17_Chr7g0250531	45.498	211	106	1	4	214	1	202	5.13e-57	179
Msa0220990	MtrunA17_Chr8g0335471	46.919	211	104	2	4	214	1	203	5.77e-57	179
Msa0220990	MtrunA17_Chr8g0349711	46.154	208	108	2	10	213	5	212	1.47e-54	173
Msa0220990	MtrunA17_Chr2g0276931	44.928	207	104	2	7	212	5	202	3.94e-54	172
Msa0220990	MtrunA17_Chr8g0349681	46.698	212	99	3	8	213	381	584	7.09e-52	176
Msa0220990	MtrunA17_Chr8g0349681	46.988	166	88	0	8	173	172	337	7.78e-46	159
Msa0220990	MtrunA17_Chr8g0349681	50.641	156	77	0	10	165	12	167	9.95e-46	159
Msa0220990	MtrunA17_Chr4g0030911	43.602	211	106	4	7	212	11	213	9.06e-52	166
Msa0220990	MtrunA17_Chr1g0182301	42.453	212	112	3	7	214	11	216	1.06e-51	166
Msa0220990	MtrunA17_Chr7g0263071	42.991	214	108	4	7	214	11	216	1.90e-51	165
Msa0220990	MtrunA17_Chr1g0212521	42.308	208	114	3	7	212	11	214	5.41e-51	164
Msa0220990	MtrunA17_Chr1g0182321	41.981	212	113	3	7	214	11	216	5.70e-51	164
Msa0220990	MtrunA17_Chr8g0384311	46.190	210	101	7	6	212	8	208	1.98e-49	160
Msa0220990	MtrunA17_Chr2g0327911	40.826	218	109	5	3	212	7	212	6.91e-48	156
Msa0220990	MtrunA17_Chr1g0159481	45.455	209	105	6	7	213	13	214	8.44e-48	156
Msa0220990	MtrunA17_Chr1g0199331	44.720	161	88	1	13	172	33	193	1.86e-45	149
Msa0220990	MtrunA17_Chr3g0130271	43.981	216	104	8	3	212	4	208	3.20e-45	149
Msa0220990	MtrunA17_Chr3g0109721	43.125	160	91	0	13	172	12	171	7.41e-45	148
Msa0220990	MtrunA17_Chr5g0433561	42.500	160	92	0	13	172	12	171	1.49e-43	145
Msa0220990	MtrunA17_Chr7g0265001	42.788	208	111	4	8	213	13	214	9.04e-43	143
Msa0220990	MtrunA17_Chr1g0197331	42.453	212	111	5	5	213	9	212	7.74e-42	140
Msa0220990	MtrunA17_Chr1g0180291	43.478	207	108	5	8	212	11	210	9.86e-42	140
Msa0220990	MtrunA17_Chr3g0123971	33.333	195	112	1	12	206	10	186	7.78e-39	133
Msa0220990	MtrunA17_Chr8g0390561	39.375	160	97	0	13	172	11	170	1.37e-38	132
Msa0220990	MtrunA17_Chr4g0055081	33.178	214	113	3	12	213	10	205	1.52e-38	132
Msa0220990	MtrunA17_Chr5g0400131	34.694	196	109	2	12	206	10	187	3.66e-38	131
Msa0220990	MtrunA17_Chr8g0382221	35.057	174	113	0	12	185	10	183	5.22e-38	130
Msa0220990	MtrunA17_Chr6g0466301	40.000	165	92	3	11	168	8	172	2.50e-37	129
Msa0220990	MtrunA17_Chr6g0465491	40.000	165	92	3	11	168	8	172	2.50e-37	129
Msa0220990	MtrunA17_Chr1g0201121	40.964	166	89	4	11	168	8	172	4.65e-36	125
Msa0220990	MtrunA17_Chr8g0383261	39.759	166	91	4	11	168	12	176	3.74e-35	123
Msa0220990	MtrunA17_Chr4g0034871	34.928	209	116	7	11	211	8	204	2.01e-34	121
Msa0220990	MtrunA17_Chr2g0331691	39.286	168	94	4	11	171	10	176	2.79e-34	121
Msa0220990	MtrunA17_Chr4g0004661	39.506	162	91	3	11	165	64	225	1.44e-32	118
Msa0220990	MtrunA17_Chr6g0466161	36.667	150	88	3	26	168	5	154	1.11e-24	96.7
Msa0220990	MtrunA17_Chr6g0465471	36.667	150	88	3	26	168	5	154	1.12e-24	96.7
Msa0220990	MtrunA17_Chr3g0138121	32.258	155	102	2	12	166	14	165	8.87e-24	94.4
Msa0220990	MtrunA17_Chr3g0138111	32.258	155	102	2	12	166	14	165	1.07e-23	94.4
Msa0220990	MtrunA17_Chr3g0138101	32.258	155	102	2	12	166	14	165	1.08e-23	94.4
Msa0220990	MtrunA17_Chr4g0046211	37.500	120	72	3	11	129	6	123	4.38e-17	75.1
Msa0220990	MtrunA17_Chr4g0037021	31.282	195	115	7	11	190	6	196	4.97e-17	75.9
Msa0220990	MtrunA17_Chr5g0405791	37.500	120	72	3	11	129	6	123	5.24e-17	75.9
Msa0220990	MtrunA17_Chr2g0325101	37.500	120	72	3	11	129	6	123	1.17e-16	75.1
Msa0220990	MtrunA17_Chr6g0466431	35.354	99	55	1	11	109	8	97	1.84e-16	72.0
Msa0220990	MtrunA17_Chr6g0465611	35.354	99	55	1	11	109	8	97	1.84e-16	72.0
Msa0220990	MtrunA17_Chr8g0371501	37.500	120	72	3	11	129	6	123	1.91e-16	74.3
Msa0220990	MtrunA17_Chr3g0117931	31.138	167	101	5	11	165	8	172	3.29e-16	74.3
Msa0220990	MtrunA17_Chr6g0486041	36.364	121	74	3	11	130	6	124	8.01e-16	73.2
Msa0220990	MtrunA17_Chr1g0182951	69.048	42	13	0	120	161	1	42	8.68e-14	63.5
Msa0220990	MtrunA17_Chr1g0178291	31.737	167	101	5	8	171	428	584	2.37e-13	68.2
Msa0220990	MtrunA17_Chr5g0443631	24.852	169	121	2	12	175	105	272	1.20e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0220990	AT5G60860.1	81.429	210	38	1	5	213	7	216	8.61e-127	357
Msa0220990	AT3G15060.1	78.199	211	45	1	5	214	7	217	4.91e-123	347
Msa0220990	AT4G18430.1	76.852	216	47	2	1	213	1	216	3.38e-122	345
Msa0220990	AT1G28550.1	76.498	217	47	3	1	213	1	217	7.46e-122	344
Msa0220990	AT2G33870.1	76.415	212	48	2	5	214	7	218	1.02e-119	339
Msa0220990	AT5G45750.1	77.619	210	45	2	5	213	7	215	1.30e-118	336
Msa0220990	AT4G18800.1	77.143	210	44	2	5	213	7	213	5.30e-117	332
Msa0220990	AT1G16920.1	73.460	211	54	2	4	213	6	215	8.28e-113	322
Msa0220990	AT1G06400.1	73.333	210	54	2	5	213	7	215	8.47e-113	322
Msa0220990	AT1G09630.1	65.728	213	70	2	5	215	6	217	1.20e-103	298
Msa0220990	AT1G07410.1	64.623	212	72	2	4	214	5	214	2.47e-100	290
Msa0220990	AT5G59150.1	64.186	215	71	3	4	214	5	217	9.70e-96	278
Msa0220990	AT3G46830.1	63.721	215	72	3	4	214	5	217	1.42e-95	278
Msa0220990	AT3G46830.2	63.721	215	72	3	4	214	5	217	1.42e-95	278
Msa0220990	AT5G47960.1	58.796	216	83	3	5	215	9	223	7.34e-88	258
Msa0220990	AT3G12160.1	57.209	215	87	2	2	212	6	219	1.53e-87	258
Msa0220990	AT4G39990.1	57.143	210	87	1	9	215	15	224	6.81e-85	251
Msa0220990	AT5G65270.1	55.708	219	91	2	2	214	8	226	1.69e-84	250
Msa0220990	AT5G47520.1	56.542	214	89	1	5	214	8	221	4.11e-82	244
Msa0220990	AT1G18200.1	53.812	223	86	3	5	212	7	227	6.47e-80	239
Msa0220990	AT1G05810.1	58.373	209	83	2	9	214	10	217	1.54e-78	234
Msa0220990	AT1G73640.1	55.556	207	85	2	5	204	7	213	3.92e-78	234
Msa0220990	AT1G05810.2	58.373	209	83	2	9	214	56	263	4.11e-78	235
Msa0220990	AT3G07410.1	57.407	216	89	2	1	213	1	216	5.05e-78	233
Msa0220990	AT2G31680.1	55.714	210	90	1	9	215	10	219	7.49e-78	233
Msa0220990	AT2G43130.1	58.173	208	80	2	9	213	10	213	8.54e-78	233
Msa0220990	AT1G01200.1	55.093	216	91	4	4	213	21	236	2.92e-77	232
Msa0220990	AT5G59150.2	58.434	166	63	3	53	214	3	166	5.75e-63	193
Msa0220990	AT4G17170.1	46.009	213	104	2	8	213	3	211	1.21e-61	191
Msa0220990	AT4G35860.1	44.976	209	112	1	8	213	3	211	2.23e-59	186
Msa0220990	AT4G17160.1	45.411	207	106	2	8	212	3	204	5.23e-58	182
Msa0220990	AT1G02130.1	46.445	211	105	3	4	214	1	203	9.90e-57	179
Msa0220990	AT4G17530.1	46.445	211	104	3	4	214	1	202	2.16e-55	175
Msa0220990	AT5G47200.1	45.116	215	101	3	4	214	1	202	4.37e-55	174
Msa0220990	AT3G11730.1	44.712	208	105	3	7	212	4	203	1.61e-53	171
Msa0220990	AT5G03520.1	45.755	212	102	4	7	213	11	214	6.93e-53	169
Msa0220990	AT3G46060.2	43.458	214	107	4	7	214	11	216	4.43e-51	165
Msa0220990	AT3G46060.3	43.458	214	107	4	7	214	11	216	4.43e-51	165
Msa0220990	AT3G46060.1	43.458	214	107	4	7	214	11	216	4.43e-51	165
Msa0220990	AT3G53610.2	42.523	214	109	4	7	214	11	216	1.21e-50	164
Msa0220990	AT3G53610.3	42.523	214	109	4	7	214	11	216	1.21e-50	164
Msa0220990	AT3G53610.1	42.523	214	109	4	7	214	11	216	1.21e-50	164
Msa0220990	AT3G09900.1	43.925	214	105	4	7	213	11	216	1.29e-50	164
Msa0220990	AT5G59840.1	42.523	214	109	4	7	214	11	216	5.14e-50	162
Msa0220990	AT5G45130.1	40.299	201	108	4	13	213	12	200	5.63e-47	154
Msa0220990	AT1G43890.3	47.701	174	88	3	6	177	8	180	4.53e-46	152
Msa0220990	AT1G43890.1	47.701	174	88	3	6	177	8	180	4.53e-46	152
Msa0220990	AT1G43890.2	47.701	174	88	3	6	177	8	180	4.53e-46	152
Msa0220990	AT3G54840.1	47.134	157	82	1	13	168	35	191	6.28e-46	151
Msa0220990	AT3G54840.3	46.795	156	82	1	14	168	2	157	1.71e-45	149
Msa0220990	AT5G45130.2	39.698	199	108	4	15	213	22	208	2.60e-45	150
Msa0220990	AT3G54840.2	47.403	154	80	1	13	165	35	188	3.66e-45	149
Msa0220990	AT4G19640.1	42.331	163	94	0	13	175	12	174	4.25e-45	149
Msa0220990	AT5G03530.2	44.231	208	107	5	8	213	10	210	2.50e-44	147
Msa0220990	AT5G03530.1	44.231	208	107	5	8	213	10	210	2.50e-44	147
Msa0220990	AT4G35860.2	41.463	164	93	1	53	213	2	165	2.00e-40	136
Msa0220990	AT5G64990.1	37.267	161	101	0	12	172	8	168	2.54e-38	132
Msa0220990	AT2G44610.1	33.333	216	112	3	12	213	10	207	5.78e-38	131
Msa0220990	AT2G22290.1	33.168	202	130	2	12	213	10	206	5.81e-38	131
Msa0220990	AT1G22740.1	42.515	167	85	5	11	168	8	172	9.83e-38	130
Msa0220990	AT5G03520.2	42.197	173	87	4	46	213	40	204	1.73e-37	130
Msa0220990	AT5G10260.1	36.943	157	99	0	12	168	10	166	1.01e-36	128
Msa0220990	AT4G39890.1	36.364	165	104	1	12	175	10	174	1.36e-36	127
Msa0220990	AT4G09720.1	39.394	165	93	3	11	168	8	172	8.91e-36	125
Msa0220990	AT5G64990.2	35.714	168	101	1	12	172	8	175	1.25e-35	125
Msa0220990	AT3G09910.3	42.781	187	100	4	8	192	10	191	3.47e-35	124
Msa0220990	AT3G09910.1	42.781	187	100	4	8	192	10	191	3.47e-35	124
Msa0220990	AT3G09910.2	42.781	187	100	4	8	192	10	191	3.47e-35	124
Msa0220990	AT4G19640.2	43.077	130	74	0	13	142	12	141	3.70e-35	122
Msa0220990	AT5G46025.1	58.491	106	43	1	73	177	6	111	3.86e-35	120
Msa0220990	AT2G21880.1	40.000	165	92	3	11	168	9	173	4.32e-35	124
Msa0220990	AT1G52280.1	40.237	169	91	5	11	171	8	174	1.02e-34	122
Msa0220990	AT4G19640.3	42.748	131	75	0	13	143	12	142	1.12e-34	122
Msa0220990	AT4G09720.4	38.824	170	92	4	11	168	8	177	3.34e-34	121
Msa0220990	AT3G18820.1	39.506	162	91	3	11	165	8	169	1.42e-33	119
Msa0220990	AT3G09910.5	43.114	167	92	3	8	172	10	175	1.88e-33	119
Msa0220990	AT3G09910.4	43.114	167	92	3	8	172	10	175	1.88e-33	119
Msa0220990	AT4G09720.3	37.500	176	92	4	11	168	8	183	3.56e-33	119
Msa0220990	AT3G16100.1	39.264	163	90	4	11	165	8	169	6.45e-33	118
Msa0220990	AT1G49300.2	37.725	167	97	3	11	170	8	174	1.97e-32	117
Msa0220990	AT1G49300.1	37.725	167	97	3	11	170	8	174	1.97e-32	117
Msa0220990	AT5G39620.1	38.415	164	94	3	12	168	6	169	3.40e-32	116
Msa0220990	AT2G21880.4	37.838	148	85	3	28	168	1	148	2.43e-26	100
Msa0220990	AT2G21880.3	37.838	148	85	3	28	168	1	148	2.43e-26	100
Msa0220990	AT4G09720.6	39.130	138	77	3	38	168	1	138	2.55e-25	97.4
Msa0220990	AT4G09720.5	39.130	138	77	3	38	168	1	138	2.55e-25	97.4
Msa0220990	AT4G09720.2	39.130	138	77	3	38	168	1	138	2.55e-25	97.4
Msa0220990	AT2G21880.2	35.152	165	92	4	11	168	9	165	3.71e-25	98.2
Msa0220990	AT5G20020.1	32.258	155	102	2	12	166	14	165	1.30e-23	94.4
Msa0220990	AT5G55190.1	32.258	155	102	2	12	166	14	165	1.46e-23	94.4
Msa0220990	AT5G20010.1	32.258	155	102	2	12	166	14	165	1.54e-23	94.4
Msa0220990	AT5G55080.1	30.435	161	109	2	12	172	14	171	2.76e-23	93.6
Msa0220990	AT2G44690.1	32.222	180	108	5	11	178	18	195	2.40e-19	82.8
Msa0220990	AT4G08190.1	50.704	71	32	1	95	165	60	127	6.70e-18	77.0
Msa0220990	AT4G35020.1	34.667	150	88	4	11	159	6	146	2.75e-17	77.0
Msa0220990	AT4G35020.2	34.667	150	88	4	11	159	6	146	2.75e-17	77.0
Msa0220990	AT4G35020.3	34.667	150	88	4	11	159	6	146	2.75e-17	77.0
Msa0220990	AT1G75840.1	37.500	120	72	3	11	129	6	123	1.78e-16	75.1
Msa0220990	AT1G20090.1	36.667	120	73	3	11	129	5	122	2.94e-16	74.3
Msa0220990	AT3G51300.1	38.136	118	70	3	13	129	8	123	3.60e-16	73.9
Msa0220990	AT2G17800.2	37.500	120	72	3	11	129	6	123	3.60e-16	73.9
Msa0220990	AT2G17800.1	37.500	120	72	3	11	129	6	123	3.60e-16	73.9
Msa0220990	AT4G35950.1	37.500	120	72	3	11	129	6	123	3.75e-16	73.9
Msa0220990	AT3G48040.1	31.737	167	100	5	11	165	8	172	5.07e-16	73.9
Msa0220990	AT4G28950.1	36.667	120	73	3	11	129	6	123	6.96e-16	73.6
Msa0220990	AT5G45970.1	36.667	120	73	3	11	129	6	123	8.40e-16	73.2
Msa0220990	AT5G62880.1	31.461	178	104	6	11	172	8	183	1.25e-15	73.2
Msa0220990	AT3G48040.2	36.667	120	73	3	11	129	8	125	2.56e-15	71.2
Msa0220990	AT5G62880.2	35.833	120	74	3	11	129	8	125	5.85e-15	70.9
Msa0220990	AT4G35020.4	36.066	122	75	3	13	133	8	127	3.39e-14	67.8
Msa0220990	AT4G35020.5	36.066	122	75	3	13	133	8	127	3.39e-14	67.8

Find 51 sgRNAs with CRISPR-Local

Find 206 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAGTAAATTCTCATCATTT+TGG	0.200341	2_1:-69511159	Msa0220990:three_prime_UTR
CATTATTGTTGTTACAATTC+AGG	0.242895	2_1:-69511019	Msa0220990:three_prime_UTR
TTCAACACCGATGGTGGATT+TGG	0.251856	2_1:+69512788	None:intergenic
CTGAATTGTAACAACAATAA+TGG	0.327085	2_1:+69511020	None:intergenic
ATCATCTTTACCAATATTGA+TGG	0.346184	2_1:+69511272	None:intergenic
GCTTGTTAAGGCTCAGATTT+GGG	0.349305	2_1:-69512733	Msa0220990:CDS
TGGAGCTGTTGGCGCATTGC+TGG	0.351844	2_1:-69511610	Msa0220990:CDS
AGCTTGTTAAGGCTCAGATT+TGG	0.356509	2_1:-69512734	Msa0220990:CDS
GAAAGAAAACATATATTTCA+TGG	0.359463	2_1:-69511424	Msa0220990:CDS
TTTCGGTTGCTGAGATATAT+AGG	0.359856	2_1:-69511064	Msa0220990:three_prime_UTR
AAAATTCGATGGTAAAATAA+AGG	0.371266	2_1:+69511102	None:intergenic
TTGTCCTATGTAATGTGTTT+CGG	0.409806	2_1:-69511081	Msa0220990:three_prime_UTR
GATTCTTGATAAGCTTGTTA+AGG	0.421134	2_1:-69512745	Msa0220990:CDS
GAGAGACGTGTACTCTTTGA+AGG	0.424290	2_1:+69513005	None:intergenic
AAGGGAGAGACCATCAATAT+TGG	0.434305	2_1:-69511282	Msa0220990:CDS
CACTAGAAATGAATTCAACT+TGG	0.437767	2_1:-69512814	Msa0220990:CDS
TGGCTCTGCGTCAGTGCCTA+AGG	0.440225	2_1:-69511301	Msa0220990:CDS
AATTTGCTACTCGCAGTGTC+AGG	0.455604	2_1:-69512767	Msa0220990:CDS
TATGTTGTAATCATGCTTGT+AGG	0.477521	2_1:-69511510	Msa0220990:CDS
TTGATCGGTGATTCTGGTGT+TGG	0.493431	2_1:-69512861	Msa0220990:CDS
AGTGAATCTAGATAAAAGAT+TGG	0.496154	2_1:+69512833	None:intergenic
ATATTGATGGTCTCTCCCTT+AGG	0.505876	2_1:+69511285	None:intergenic
GTAGGAGACTGTTACAGAAA+AGG	0.507063	2_1:+69513036	None:intergenic
TTCTTTCTCAGCAAATGTGG+TGG	0.512980	2_1:+69511440	None:intergenic
AGAGATGTATACATTAGAAG+AGG	0.513980	2_1:-69511196	Msa0220990:three_prime_UTR
AAGACTCTTGAGAAAGAGAA+TGG	0.519287	2_1:-69511321	Msa0220990:CDS
AGCAAATTCAACACCGATGG+TGG	0.523464	2_1:+69512782	None:intergenic
GGGATACTGCTGGTCAAGAA+AGG	0.539209	2_1:-69512713	Msa0220990:intron
ATACGATTACTTGTTCAAGT+TGG	0.541653	2_1:-69512886	Msa0220990:CDS
AAATGTTGAGAGGTGGTTGA+AGG	0.552257	2_1:-69511556	Msa0220990:CDS
GAATGTGGACAATGCTTTCG+TGG	0.554557	2_1:-69511379	Msa0220990:CDS
GCATACTACCGTGGAGCTGT+TGG	0.560757	2_1:-69511621	Msa0220990:CDS
GAGCGTGAATTCTATTCATA+CGG	0.567954	2_1:-69513062	None:intergenic
GACGTGTACTCTTTGAAGGA+AGG	0.571566	2_1:+69513009	None:intergenic
GCTCAGATTTGGGATACTGC+TGG	0.571910	2_1:-69512723	Msa0220990:CDS
TACAAGCATGATTACAACAT+AGG	0.576438	2_1:+69511512	None:intergenic
TGCACTAGAGTCACTGAATG+TGG	0.577750	2_1:-69511394	Msa0220990:CDS
GGCTCTGCGTCAGTGCCTAA+GGG	0.585884	2_1:-69511300	Msa0220990:CDS
ACACTTGCAAGCTGTGTCAA+CGG	0.600216	2_1:-69511469	Msa0220990:CDS
TGCTGGTGTACGACTCAACA+AGG	0.604227	2_1:-69511593	Msa0220990:CDS
GTTTCAGATGTTAAGAAGAG+CGG	0.605436	2_1:-69511249	Msa0220990:CDS
CATTTGAAAATGTTGAGAGG+TGG	0.614736	2_1:-69511563	Msa0220990:CDS
GCAACCGAAACACATTACAT+AGG	0.618709	2_1:+69511077	None:intergenic
TTACATAGGACAAAATTCGA+TGG	0.629469	2_1:+69511091	None:intergenic
AGTAGCAAATTCAACACCGA+TGG	0.634065	2_1:+69512779	None:intergenic
TTGGAATCCAAATCCACCAT+CGG	0.638269	2_1:-69512795	Msa0220990:CDS
GGAGACTGTTACAGAAAAGG+AGG	0.650383	2_1:+69513039	None:intergenic
GCAATGCGCCAACAGCTCCA+CGG	0.668645	2_1:+69511613	None:intergenic
TGACATTTGAAAATGTTGAG+AGG	0.673555	2_1:-69511566	Msa0220990:CDS
TCTTTGAAGGAAGGAAACGT+AGG	0.691114	2_1:+69513018	None:intergenic
ATCACAAGTGCATACTACCG+TGG	0.721157	2_1:-69511630	Msa0220990:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATATAAAAACATTTCAAA+TGG	+	chr2_1:69512923-69512942	None:intergenic	10.0%
!!	AAATATAAAAACATTTCAAA+TGG	+	chr2_1:69512923-69512942	None:intergenic	10.0%
!!!	TACTCTTTCATTTTTAATGT+CGG	-	chr2_1:69511690-69511709	Msa0220990:intron	20.0%
!!	TTCTTAATATTGTAGAGAAT+TGG	-	chr2_1:69511779-69511798	Msa0220990:intron	20.0%
!!	TCTTAATATTGTAGAGAATT+GGG	-	chr2_1:69511780-69511799	Msa0220990:intron	20.0%
!!	ATATTGGAAGAAATAAACAA+TGG	+	chr2_1:69511855-69511874	None:intergenic	20.0%
!!	TGAAAAAACTAAATGGATAT+TGG	+	chr2_1:69511871-69511890	None:intergenic	20.0%
!!!	CAAACTTTGAAAAAACTAAA+TGG	+	chr2_1:69511878-69511897	None:intergenic	20.0%
!!!	AAATTGAACTCTTATTTTAG+AGG	+	chr2_1:69512172-69512191	None:intergenic	20.0%
!!	GAAAGAAAACATATATTTCA+TGG	-	chr2_1:69512629-69512648	Msa0220990:intron	20.0%
!!	AAAATTCGATGGTAAAATAA+AGG	+	chr2_1:69512954-69512973	None:intergenic	20.0%
!!!	TACTCTTTCATTTTTAATGT+CGG	-	chr2_1:69511690-69511709	Msa0220990:intron	20.0%
!!	TTCTTAATATTGTAGAGAAT+TGG	-	chr2_1:69511779-69511798	Msa0220990:intron	20.0%
!!	TCTTAATATTGTAGAGAATT+GGG	-	chr2_1:69511780-69511799	Msa0220990:intron	20.0%
!!	ATATTGGAAGAAATAAACAA+TGG	+	chr2_1:69511855-69511874	None:intergenic	20.0%
!!	TGAAAAAACTAAATGGATAT+TGG	+	chr2_1:69511871-69511890	None:intergenic	20.0%
!!!	CAAACTTTGAAAAAACTAAA+TGG	+	chr2_1:69511878-69511897	None:intergenic	20.0%
!!!	AAATTGAACTCTTATTTTAG+AGG	+	chr2_1:69512172-69512191	None:intergenic	20.0%
!!	GAAAGAAAACATATATTTCA+TGG	-	chr2_1:69512629-69512648	Msa0220990:intron	20.0%
!!	AAAATTCGATGGTAAAATAA+AGG	+	chr2_1:69512954-69512973	None:intergenic	20.0%
!	GATCGAAAAATGAATGAAAA+GGG	+	chr2_1:69511100-69511119	None:intergenic	25.0%
!	AGATCGAAAAATGAATGAAA+AGG	+	chr2_1:69511101-69511120	None:intergenic	25.0%
!!	TTTTTCATCATCATCATCAA+TGG	-	chr2_1:69511128-69511147	Msa0220990:three_prime_UTR	25.0%
!!	TTTTCATCATCATCATCAAT+GGG	-	chr2_1:69511129-69511148	Msa0220990:three_prime_UTR	25.0%
!	AGTGAATCTAGATAAAAGAT+TGG	+	chr2_1:69511223-69511242	None:intergenic	25.0%
!	AGAATGAAATTGAAGAGAAA+AGG	+	chr2_1:69511371-69511390	None:intergenic	25.0%
!!!	GCAAAAAGTGTTTTTTTTTG+TGG	-	chr2_1:69511425-69511444	Msa0220990:CDS	25.0%
!!!	AGTGTTTTTTTTTGTGGTTT+TGG	-	chr2_1:69511431-69511450	Msa0220990:CDS	25.0%
!!!	GTGTTTTTTTTTGTGGTTTT+GGG	-	chr2_1:69511432-69511451	Msa0220990:CDS	25.0%
!	GATTGATGAATTGAATTGAA+TGG	-	chr2_1:69511532-69511551	Msa0220990:CDS	25.0%
!!!	TACTTTTTTGCTTTTGATCT+TGG	-	chr2_1:69511576-69511595	Msa0220990:CDS	25.0%
!!!	TGTATCTTAGAATTTGTTGT+TGG	-	chr2_1:69511630-69511649	Msa0220990:CDS	25.0%
!!!	GTATCTTAGAATTTGTTGTT+GGG	-	chr2_1:69511631-69511650	Msa0220990:CDS	25.0%
!!!	ACTCTTTCATTTTTAATGTC+GGG	-	chr2_1:69511691-69511710	Msa0220990:intron	25.0%
!	GTTCAATCTGTTGTTAAATA+AGG	-	chr2_1:69511714-69511733	Msa0220990:intron	25.0%
!	ATGATCACAAAAACTATAGA+TGG	-	chr2_1:69511819-69511838	Msa0220990:intron	25.0%
!!	CAATTTGTTCAATATATCGA+AGG	-	chr2_1:69511898-69511917	Msa0220990:intron	25.0%
!	AAAACGAGTTTACAAGATTT+AGG	+	chr2_1:69512258-69512277	None:intergenic	25.0%
!	AGACAGAAAAATTCTCTAAA+TGG	+	chr2_1:69512300-69512319	None:intergenic	25.0%
!	ATCATCTTTACCAATATTGA+TGG	+	chr2_1:69512784-69512803	None:intergenic	25.0%
!!	AGAGTAAATTCTCATCATTT+TGG	-	chr2_1:69512894-69512913	Msa0220990:CDS	25.0%
!!	GAGTAAATTCTCATCATTTT+GGG	-	chr2_1:69512895-69512914	Msa0220990:CDS	25.0%
!	CTGAATTGTAACAACAATAA+TGG	+	chr2_1:69513036-69513055	None:intergenic	25.0%
!!	CATTATTGTTGTTACAATTC+AGG	-	chr2_1:69513034-69513053	Msa0220990:five_prime_UTR	25.0%
!	GATCGAAAAATGAATGAAAA+GGG	+	chr2_1:69511100-69511119	None:intergenic	25.0%
!	AGATCGAAAAATGAATGAAA+AGG	+	chr2_1:69511101-69511120	None:intergenic	25.0%
!!	TTTTTCATCATCATCATCAA+TGG	-	chr2_1:69511128-69511147	Msa0220990:three_prime_UTR	25.0%
!!	TTTTCATCATCATCATCAAT+GGG	-	chr2_1:69511129-69511148	Msa0220990:three_prime_UTR	25.0%
!	AGTGAATCTAGATAAAAGAT+TGG	+	chr2_1:69511223-69511242	None:intergenic	25.0%
!	AGAATGAAATTGAAGAGAAA+AGG	+	chr2_1:69511371-69511390	None:intergenic	25.0%
!!!	GCAAAAAGTGTTTTTTTTTG+TGG	-	chr2_1:69511425-69511444	Msa0220990:CDS	25.0%
!!!	AGTGTTTTTTTTTGTGGTTT+TGG	-	chr2_1:69511431-69511450	Msa0220990:CDS	25.0%
!!!	GTGTTTTTTTTTGTGGTTTT+GGG	-	chr2_1:69511432-69511451	Msa0220990:CDS	25.0%
!	GATTGATGAATTGAATTGAA+TGG	-	chr2_1:69511532-69511551	Msa0220990:CDS	25.0%
!!!	TACTTTTTTGCTTTTGATCT+TGG	-	chr2_1:69511576-69511595	Msa0220990:CDS	25.0%
!!!	TGTATCTTAGAATTTGTTGT+TGG	-	chr2_1:69511630-69511649	Msa0220990:CDS	25.0%
!!!	GTATCTTAGAATTTGTTGTT+GGG	-	chr2_1:69511631-69511650	Msa0220990:CDS	25.0%
!!!	ACTCTTTCATTTTTAATGTC+GGG	-	chr2_1:69511691-69511710	Msa0220990:intron	25.0%
!	GTTCAATCTGTTGTTAAATA+AGG	-	chr2_1:69511714-69511733	Msa0220990:intron	25.0%
!	ATGATCACAAAAACTATAGA+TGG	-	chr2_1:69511819-69511838	Msa0220990:intron	25.0%
!!	CAATTTGTTCAATATATCGA+AGG	-	chr2_1:69511898-69511917	Msa0220990:intron	25.0%
!	AAAACGAGTTTACAAGATTT+AGG	+	chr2_1:69512258-69512277	None:intergenic	25.0%
!	AGACAGAAAAATTCTCTAAA+TGG	+	chr2_1:69512300-69512319	None:intergenic	25.0%
!	ATCATCTTTACCAATATTGA+TGG	+	chr2_1:69512784-69512803	None:intergenic	25.0%
!!	AGAGTAAATTCTCATCATTT+TGG	-	chr2_1:69512894-69512913	Msa0220990:CDS	25.0%
!!	GAGTAAATTCTCATCATTTT+GGG	-	chr2_1:69512895-69512914	Msa0220990:CDS	25.0%
!	CTGAATTGTAACAACAATAA+TGG	+	chr2_1:69513036-69513055	None:intergenic	25.0%
!!	CATTATTGTTGTTACAATTC+AGG	-	chr2_1:69513034-69513053	Msa0220990:five_prime_UTR	25.0%
	ATACGATTACTTGTTCAAGT+TGG	-	chr2_1:69511167-69511186	Msa0220990:three_prime_UTR	30.0%
!!!	TTGTTCAAGTTGGTTTTGAT+CGG	-	chr2_1:69511177-69511196	Msa0220990:three_prime_UTR	30.0%
	CACTAGAAATGAATTCAACT+TGG	-	chr2_1:69511239-69511258	Msa0220990:CDS	30.0%
!!	GATTCTTGATAAGCTTGTTA+AGG	-	chr2_1:69511308-69511327	Msa0220990:CDS	30.0%
!!	GGGTTTTGATCTTAATGTTT+AGG	-	chr2_1:69511452-69511471	Msa0220990:CDS	30.0%
!!	GACAGTGATAATTTGTTGTT+GGG	-	chr2_1:69511474-69511493	Msa0220990:CDS	30.0%
	AATGGAGTGAAAATGCAAAA+GGG	-	chr2_1:69511550-69511569	Msa0220990:CDS	30.0%
!!	CTCTTTCATTTTTAATGTCG+GGG	-	chr2_1:69511692-69511711	Msa0220990:intron	30.0%
	GGAAGAAATAAACAATGGTT+AGG	+	chr2_1:69511850-69511869	None:intergenic	30.0%
!!	GACTTTTAGAAGAGAAACTA+TGG	+	chr2_1:69512022-69512041	None:intergenic	30.0%
	AGGAAAAAGTAAGTGCATAT+TGG	+	chr2_1:69512152-69512171	None:intergenic	30.0%
!	AAATGGAACTCTCATTTTAG+AGG	+	chr2_1:69512283-69512302	None:intergenic	30.0%
	AATAAGAGACTACAAGATTC+AGG	+	chr2_1:69512375-69512394	None:intergenic	30.0%
	TGACATTTGAAAATGTTGAG+AGG	-	chr2_1:69512487-69512506	Msa0220990:intron	30.0%
	TACAAGCATGATTACAACAT+AGG	+	chr2_1:69512544-69512563	None:intergenic	30.0%
	TATGTTGTAATCATGCTTGT+AGG	-	chr2_1:69512543-69512562	Msa0220990:intron	30.0%
	AGAGATGTATACATTAGAAG+AGG	-	chr2_1:69512857-69512876	Msa0220990:CDS	30.0%
	TTACATAGGACAAAATTCGA+TGG	+	chr2_1:69512965-69512984	None:intergenic	30.0%
	TTGTCCTATGTAATGTGTTT+CGG	-	chr2_1:69512972-69512991	Msa0220990:five_prime_UTR	30.0%
	ATACGATTACTTGTTCAAGT+TGG	-	chr2_1:69511167-69511186	Msa0220990:three_prime_UTR	30.0%
!!!	TTGTTCAAGTTGGTTTTGAT+CGG	-	chr2_1:69511177-69511196	Msa0220990:three_prime_UTR	30.0%
	CACTAGAAATGAATTCAACT+TGG	-	chr2_1:69511239-69511258	Msa0220990:CDS	30.0%
!!	GATTCTTGATAAGCTTGTTA+AGG	-	chr2_1:69511308-69511327	Msa0220990:CDS	30.0%
!!	GGGTTTTGATCTTAATGTTT+AGG	-	chr2_1:69511452-69511471	Msa0220990:CDS	30.0%
!!	GACAGTGATAATTTGTTGTT+GGG	-	chr2_1:69511474-69511493	Msa0220990:CDS	30.0%
	AATGGAGTGAAAATGCAAAA+GGG	-	chr2_1:69511550-69511569	Msa0220990:CDS	30.0%
!!	CTCTTTCATTTTTAATGTCG+GGG	-	chr2_1:69511692-69511711	Msa0220990:intron	30.0%
	GGAAGAAATAAACAATGGTT+AGG	+	chr2_1:69511850-69511869	None:intergenic	30.0%
!!	GACTTTTAGAAGAGAAACTA+TGG	+	chr2_1:69512022-69512041	None:intergenic	30.0%
	AGGAAAAAGTAAGTGCATAT+TGG	+	chr2_1:69512152-69512171	None:intergenic	30.0%
!	AAATGGAACTCTCATTTTAG+AGG	+	chr2_1:69512283-69512302	None:intergenic	30.0%
	AATAAGAGACTACAAGATTC+AGG	+	chr2_1:69512375-69512394	None:intergenic	30.0%
	TGACATTTGAAAATGTTGAG+AGG	-	chr2_1:69512487-69512506	Msa0220990:intron	30.0%
	TACAAGCATGATTACAACAT+AGG	+	chr2_1:69512544-69512563	None:intergenic	30.0%
	TATGTTGTAATCATGCTTGT+AGG	-	chr2_1:69512543-69512562	Msa0220990:intron	30.0%
	AGAGATGTATACATTAGAAG+AGG	-	chr2_1:69512857-69512876	Msa0220990:CDS	30.0%
	TTACATAGGACAAAATTCGA+TGG	+	chr2_1:69512965-69512984	None:intergenic	30.0%
	TTGTCCTATGTAATGTGTTT+CGG	-	chr2_1:69512972-69512991	Msa0220990:five_prime_UTR	30.0%
!!	GGACAGTGATAATTTGTTGT+TGG	-	chr2_1:69511473-69511492	Msa0220990:CDS	35.0%
	GAATGGAGTGAAAATGCAAA+AGG	-	chr2_1:69511549-69511568	Msa0220990:CDS	35.0%
	AAGACACTGATCATAAACAG+AGG	-	chr2_1:69511604-69511623	Msa0220990:CDS	35.0%
!!	AATTTGTTGTTGGGTAGAGA+AGG	-	chr2_1:69511483-69511502	Msa0220990:CDS	35.0%
	ATGATTGTTCCAATTACCCT+TGG	-	chr2_1:69511934-69511953	Msa0220990:intron	35.0%
!!	AGTTCTAGAAGAGAATCCAA+GGG	+	chr2_1:69511953-69511972	None:intergenic	35.0%
	GAAGAGAAACTATGGCTAAT+TGG	+	chr2_1:69512014-69512033	None:intergenic	35.0%
	AAGATGTCTTACTGCATGTT+TGG	-	chr2_1:69512087-69512106	Msa0220990:intron	35.0%
	GTAAGTGCATATTGGTATCA+CGG	+	chr2_1:69512144-69512163	None:intergenic	35.0%
	CATTTGAAAATGTTGAGAGG+TGG	-	chr2_1:69512490-69512509	Msa0220990:intron	35.0%
!	GTTTTCTTTCTCAGCAAATG+TGG	+	chr2_1:69512619-69512638	None:intergenic	35.0%
	AAGACTCTTGAGAAAGAGAA+TGG	-	chr2_1:69512732-69512751	Msa0220990:CDS	35.0%
	GTTTCAGATGTTAAGAAGAG+CGG	-	chr2_1:69512804-69512823	Msa0220990:CDS	35.0%
	TTTCGGTTGCTGAGATATAT+AGG	-	chr2_1:69512989-69513008	Msa0220990:five_prime_UTR	35.0%
!!	GGACAGTGATAATTTGTTGT+TGG	-	chr2_1:69511473-69511492	Msa0220990:CDS	35.0%
	GAATGGAGTGAAAATGCAAA+AGG	-	chr2_1:69511549-69511568	Msa0220990:CDS	35.0%
	AAGACACTGATCATAAACAG+AGG	-	chr2_1:69511604-69511623	Msa0220990:CDS	35.0%
!!	AATTTGTTGTTGGGTAGAGA+AGG	-	chr2_1:69511483-69511502	Msa0220990:CDS	35.0%
	ATGATTGTTCCAATTACCCT+TGG	-	chr2_1:69511934-69511953	Msa0220990:intron	35.0%
!!	AGTTCTAGAAGAGAATCCAA+GGG	+	chr2_1:69511953-69511972	None:intergenic	35.0%
	GAAGAGAAACTATGGCTAAT+TGG	+	chr2_1:69512014-69512033	None:intergenic	35.0%
	AAGATGTCTTACTGCATGTT+TGG	-	chr2_1:69512087-69512106	Msa0220990:intron	35.0%
	GTAAGTGCATATTGGTATCA+CGG	+	chr2_1:69512144-69512163	None:intergenic	35.0%
	CATTTGAAAATGTTGAGAGG+TGG	-	chr2_1:69512490-69512509	Msa0220990:intron	35.0%
!	GTTTTCTTTCTCAGCAAATG+TGG	+	chr2_1:69512619-69512638	None:intergenic	35.0%
	AAGACTCTTGAGAAAGAGAA+TGG	-	chr2_1:69512732-69512751	Msa0220990:CDS	35.0%
	GTTTCAGATGTTAAGAAGAG+CGG	-	chr2_1:69512804-69512823	Msa0220990:CDS	35.0%
	TTTCGGTTGCTGAGATATAT+AGG	-	chr2_1:69512989-69513008	Msa0220990:five_prime_UTR	35.0%
	GTAGGAGACTGTTACAGAAA+AGG	+	chr2_1:69511020-69511039	None:intergenic	40.0%
!	TCTTTGAAGGAAGGAAACGT+AGG	+	chr2_1:69511038-69511057	None:intergenic	40.0%
!!!	TTGGTTTTGATCGGTGATTC+TGG	-	chr2_1:69511186-69511205	Msa0220990:three_prime_UTR	40.0%
	TTGGAATCCAAATCCACCAT+CGG	-	chr2_1:69511258-69511277	Msa0220990:CDS	40.0%
	AGTAGCAAATTCAACACCGA+TGG	+	chr2_1:69511277-69511296	None:intergenic	40.0%
!!	AGCTTGTTAAGGCTCAGATT+TGG	-	chr2_1:69511319-69511338	Msa0220990:CDS	40.0%
!	GCTTGTTAAGGCTCAGATTT+GGG	-	chr2_1:69511320-69511339	Msa0220990:CDS	40.0%
	GTTGGGTAGAGAATGAATTG+AGG	-	chr2_1:69511491-69511510	Msa0220990:CDS	40.0%
	TGTTGGGTAGAGAAGGAATT+TGG	-	chr2_1:69511647-69511666	Msa0220990:intron	40.0%
	GTTGGGTAGAGAAGGAATTT+GGG	-	chr2_1:69511648-69511667	Msa0220990:intron	40.0%
	GAAGAGAATCCAAGGGTAAT+TGG	+	chr2_1:69511946-69511965	None:intergenic	40.0%
!!	GAGTTCTAGAAGAGAATCCA+AGG	+	chr2_1:69511954-69511973	None:intergenic	40.0%
	AAATGTTGAGAGGTGGTTGA+AGG	-	chr2_1:69512497-69512516	Msa0220990:intron	40.0%
	TTCTTTCTCAGCAAATGTGG+TGG	+	chr2_1:69512616-69512635	None:intergenic	40.0%
!	ATATTGATGGTCTCTCCCTT+AGG	+	chr2_1:69512771-69512790	None:intergenic	40.0%
	AAGGGAGAGACCATCAATAT+TGG	-	chr2_1:69512771-69512790	Msa0220990:CDS	40.0%
	GCAACCGAAACACATTACAT+AGG	+	chr2_1:69512979-69512998	None:intergenic	40.0%
	GTAGGAGACTGTTACAGAAA+AGG	+	chr2_1:69511020-69511039	None:intergenic	40.0%
!	TCTTTGAAGGAAGGAAACGT+AGG	+	chr2_1:69511038-69511057	None:intergenic	40.0%
!!!	TTGGTTTTGATCGGTGATTC+TGG	-	chr2_1:69511186-69511205	Msa0220990:three_prime_UTR	40.0%
	TTGGAATCCAAATCCACCAT+CGG	-	chr2_1:69511258-69511277	Msa0220990:CDS	40.0%
	AGTAGCAAATTCAACACCGA+TGG	+	chr2_1:69511277-69511296	None:intergenic	40.0%
!!	AGCTTGTTAAGGCTCAGATT+TGG	-	chr2_1:69511319-69511338	Msa0220990:CDS	40.0%
!	GCTTGTTAAGGCTCAGATTT+GGG	-	chr2_1:69511320-69511339	Msa0220990:CDS	40.0%
	GTTGGGTAGAGAATGAATTG+AGG	-	chr2_1:69511491-69511510	Msa0220990:CDS	40.0%
	TGTTGGGTAGAGAAGGAATT+TGG	-	chr2_1:69511647-69511666	Msa0220990:intron	40.0%
	GTTGGGTAGAGAAGGAATTT+GGG	-	chr2_1:69511648-69511667	Msa0220990:intron	40.0%
	GAAGAGAATCCAAGGGTAAT+TGG	+	chr2_1:69511946-69511965	None:intergenic	40.0%
!!	GAGTTCTAGAAGAGAATCCA+AGG	+	chr2_1:69511954-69511973	None:intergenic	40.0%
	AAATGTTGAGAGGTGGTTGA+AGG	-	chr2_1:69512497-69512516	Msa0220990:intron	40.0%
	TTCTTTCTCAGCAAATGTGG+TGG	+	chr2_1:69512616-69512635	None:intergenic	40.0%
!	ATATTGATGGTCTCTCCCTT+AGG	+	chr2_1:69512771-69512790	None:intergenic	40.0%
	AAGGGAGAGACCATCAATAT+TGG	-	chr2_1:69512771-69512790	Msa0220990:CDS	40.0%
	GCAACCGAAACACATTACAT+AGG	+	chr2_1:69512979-69512998	None:intergenic	40.0%
	GGAGACTGTTACAGAAAAGG+AGG	+	chr2_1:69511017-69511036	None:intergenic	45.0%
!	GACGTGTACTCTTTGAAGGA+AGG	+	chr2_1:69511047-69511066	None:intergenic	45.0%
	GAGAGACGTGTACTCTTTGA+AGG	+	chr2_1:69511051-69511070	None:intergenic	45.0%
	TTGATCGGTGATTCTGGTGT+TGG	-	chr2_1:69511192-69511211	Msa0220990:three_prime_UTR	45.0%
!!	TTCAACACCGATGGTGGATT+TGG	+	chr2_1:69511268-69511287	None:intergenic	45.0%
	AGCAAATTCAACACCGATGG+TGG	+	chr2_1:69511274-69511293	None:intergenic	45.0%
!!	AATTTGCTACTCGCAGTGTC+AGG	-	chr2_1:69511286-69511305	Msa0220990:CDS	45.0%
	ATCACAAGTGCATACTACCG+TGG	-	chr2_1:69512423-69512442	Msa0220990:intron	45.0%
	ACACTTGCAAGCTGTGTCAA+CGG	-	chr2_1:69512584-69512603	Msa0220990:intron	45.0%
	TGCACTAGAGTCACTGAATG+TGG	-	chr2_1:69512659-69512678	Msa0220990:intron	45.0%
	GAATGTGGACAATGCTTTCG+TGG	-	chr2_1:69512674-69512693	Msa0220990:intron	45.0%
	GGAGACTGTTACAGAAAAGG+AGG	+	chr2_1:69511017-69511036	None:intergenic	45.0%
!	GACGTGTACTCTTTGAAGGA+AGG	+	chr2_1:69511047-69511066	None:intergenic	45.0%
	GAGAGACGTGTACTCTTTGA+AGG	+	chr2_1:69511051-69511070	None:intergenic	45.0%
	TTGATCGGTGATTCTGGTGT+TGG	-	chr2_1:69511192-69511211	Msa0220990:three_prime_UTR	45.0%
!!	TTCAACACCGATGGTGGATT+TGG	+	chr2_1:69511268-69511287	None:intergenic	45.0%
	AGCAAATTCAACACCGATGG+TGG	+	chr2_1:69511274-69511293	None:intergenic	45.0%
!!	AATTTGCTACTCGCAGTGTC+AGG	-	chr2_1:69511286-69511305	Msa0220990:CDS	45.0%
	ATCACAAGTGCATACTACCG+TGG	-	chr2_1:69512423-69512442	Msa0220990:intron	45.0%
	ACACTTGCAAGCTGTGTCAA+CGG	-	chr2_1:69512584-69512603	Msa0220990:intron	45.0%
	TGCACTAGAGTCACTGAATG+TGG	-	chr2_1:69512659-69512678	Msa0220990:intron	45.0%
	GAATGTGGACAATGCTTTCG+TGG	-	chr2_1:69512674-69512693	Msa0220990:intron	45.0%
!	GCTCAGATTTGGGATACTGC+TGG	-	chr2_1:69511330-69511349	Msa0220990:CDS	50.0%
	GGGATACTGCTGGTCAAGAA+AGG	-	chr2_1:69511340-69511359	Msa0220990:CDS	50.0%
	TGCTGGTGTACGACTCAACA+AGG	-	chr2_1:69512460-69512479	Msa0220990:intron	50.0%
!	GCTCAGATTTGGGATACTGC+TGG	-	chr2_1:69511330-69511349	Msa0220990:CDS	50.0%
	GGGATACTGCTGGTCAAGAA+AGG	-	chr2_1:69511340-69511359	Msa0220990:CDS	50.0%
	TGCTGGTGTACGACTCAACA+AGG	-	chr2_1:69512460-69512479	Msa0220990:intron	50.0%
	GCATACTACCGTGGAGCTGT+TGG	-	chr2_1:69512432-69512451	Msa0220990:intron	55.0%
	GCATACTACCGTGGAGCTGT+TGG	-	chr2_1:69512432-69512451	Msa0220990:intron	55.0%
	GCAATGCGCCAACAGCTCCA+CGG	+	chr2_1:69512443-69512462	None:intergenic	60.0%
	TGGAGCTGTTGGCGCATTGC+TGG	-	chr2_1:69512443-69512462	Msa0220990:intron	60.0%
!	TGGCTCTGCGTCAGTGCCTA+AGG	-	chr2_1:69512752-69512771	Msa0220990:CDS	60.0%
	GGCTCTGCGTCAGTGCCTAA+GGG	-	chr2_1:69512753-69512772	Msa0220990:CDS	60.0%
	GCAATGCGCCAACAGCTCCA+CGG	+	chr2_1:69512443-69512462	None:intergenic	60.0%
	TGGAGCTGTTGGCGCATTGC+TGG	-	chr2_1:69512443-69512462	Msa0220990:intron	60.0%
!	TGGCTCTGCGTCAGTGCCTA+AGG	-	chr2_1:69512752-69512771	Msa0220990:CDS	60.0%
	GGCTCTGCGTCAGTGCCTAA+GGG	-	chr2_1:69512753-69512772	Msa0220990:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_1	gene	69510995	69513080	69510995	ID=Msa0220990;Name=Msa0220990
chr2_1	mRNA	69510995	69513080	69510995	ID=Msa0220990-mRNA-1;Parent=Msa0220990;Name=Msa0220990-mRNA-1;_AED=0.02;_eAED=0.02;_QI=152\|1\|1\|1\|1\|1\|2\|235\|215
chr2_1	exon	69510995	69511662	69510995	ID=Msa0220990-mRNA-1:exon:19695;Parent=Msa0220990-mRNA-1
chr2_1	exon	69512714	69513080	69512714	ID=Msa0220990-mRNA-1:exon:19694;Parent=Msa0220990-mRNA-1
chr2_1	five_prime_UTR	69512929	69513080	69512929	ID=Msa0220990-mRNA-1:five_prime_utr;Parent=Msa0220990-mRNA-1
chr2_1	CDS	69512714	69512928	69512714	ID=Msa0220990-mRNA-1:cds;Parent=Msa0220990-mRNA-1
chr2_1	CDS	69511230	69511662	69511230	ID=Msa0220990-mRNA-1:cds;Parent=Msa0220990-mRNA-1
chr2_1	three_prime_UTR	69510995	69511229	69510995	ID=Msa0220990-mRNA-1:three_prime_utr;Parent=Msa0220990-mRNA-1

Gene Sequence

>Msa0220990

ATGGGTGCTGTAGACGAAGAATACGATTACTTGTTCAAGTTGGTTTTGATCGGTGATTCTGGTGTTGGAAAGTCCAATCTTTTATCTAGATTCACTAGAAATGAATTCAACTTGGAATCCAAATCCACCATCGGTGTTGAATTTGCTACTCGCAGTGTCAGGATTCTTGATAAGCTTGTTAAGGCTCAGATTTGGGATACTGCTGGTCAAGAAAGATATCGTGCAATCACAAGTGCATACTACCGTGGAGCTGTTGGCGCATTGCTGGTGTACGACTCAACAAGGCATGTGACATTTGAAAATGTTGAGAGGTGGTTGAAGGAGCTTCGAGATCATACAGATGCCTATGTTGTAATCATGCTTGTAGGAAACAAAGCAGATCTTCGACACTTGCAAGCTGTGTCAACGGAAGAAGCCACCACATTTGCTGAGAAAGAAAACATATATTTCATGGAAACTTCTGCACTAGAGTCACTGAATGTGGACAATGCTTTCGTGGAAGTGCTCACTCAAATATACAATGTTGTGAGTAAGAAGACTCTTGAGAAAGAGAATGGCTCTGCGTCAGTGCCTAAGGGAGAGACCATCAATATTGGTAAAGATGATGTTTCAGATGTTAAGAAGAGCGGATGCTGCAGTACAGCATAG

Protein sequence

>Msa0220990

MGAVDEEYDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRILDKLVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDSTRHVTFENVERWLKELRDHTDAYVVIMLVGNKADLRHLQAVSTEEATTFAEKENIYFMETSALESLNVDNAFVEVLTQIYNVVSKKTLEKENGSASVPKGETINIGKDDVSDVKKSGCCSTA*