Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001098.t1 | XP_003618775.2 | 100 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 1.70E-258 | 901.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001098.t1 | O64937 | 96.9 | 447 | 14 | 0 | 1 | 447 | 1 | 447 | 1.2e-255 | 883.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001098.t1 | G7KN61 | 100.0 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 1.2e-258 | 901.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001098.t1 | MTR_6g021800 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
| MS.gene001098.t1 | MTR_6g021805 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
| MS.gene001098.t1 | MTR_1g495705 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| MS.gene001098.t1 | MTR_1g095650 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| MS.gene001098.t1 | MTR_1g095703 | 96.429 | 448 | 15 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| MS.gene001098.t1 | MTR_4g014810 | 95.302 | 447 | 21 | 0 | 1 | 447 | 1 | 447 | 0.0 | 891 |
| MS.gene001098.t1 | MTR_1g013680 | 95.227 | 440 | 18 | 1 | 1 | 437 | 1 | 440 | 0.0 | 865 |
| MS.gene001098.t1 | MTR_1g085410 | 81.336 | 434 | 81 | 0 | 1 | 434 | 1 | 434 | 0.0 | 739 |
| MS.gene001098.t1 | MTR_1g101870 | 80.182 | 439 | 82 | 3 | 1 | 439 | 1 | 434 | 0.0 | 726 |
| MS.gene001098.t1 | MTR_1g101870 | 80.182 | 439 | 82 | 3 | 1 | 439 | 1 | 434 | 0.0 | 724 |
| MS.gene001098.t1 | MTR_1g024175 | 78.802 | 434 | 92 | 0 | 1 | 434 | 1 | 434 | 0.0 | 724 |
| MS.gene001098.t1 | MTR_8g014590 | 77.951 | 449 | 96 | 2 | 1 | 446 | 1 | 449 | 0.0 | 713 |
| MS.gene001098.t1 | MTR_1g095650 | 95.965 | 347 | 13 | 1 | 102 | 447 | 1 | 347 | 0.0 | 688 |
| MS.gene001098.t1 | MTR_2g082730 | 70.682 | 440 | 112 | 2 | 1 | 438 | 1 | 425 | 0.0 | 639 |
| MS.gene001098.t1 | MTR_5g037350 | 66.383 | 470 | 121 | 1 | 3 | 435 | 13 | 482 | 0.0 | 629 |
| MS.gene001098.t1 | MTR_1g089520 | 69.406 | 438 | 116 | 3 | 4 | 440 | 5 | 425 | 0.0 | 623 |
| MS.gene001098.t1 | MTR_2g082665 | 65.682 | 440 | 108 | 2 | 1 | 438 | 1 | 399 | 0.0 | 581 |
| MS.gene001098.t1 | MTR_2g037420 | 63.053 | 452 | 121 | 4 | 1 | 447 | 1 | 411 | 0.0 | 558 |
| MS.gene001098.t1 | MTR_2g080210 | 64.368 | 435 | 119 | 4 | 1 | 432 | 1 | 402 | 0.0 | 549 |
| MS.gene001098.t1 | MTR_8g013910 | 63.029 | 449 | 131 | 5 | 1 | 433 | 1 | 430 | 0.0 | 546 |
| MS.gene001098.t1 | MTR_8g008740 | 78.154 | 325 | 70 | 1 | 1 | 324 | 1 | 325 | 0.0 | 538 |
| MS.gene001098.t1 | MTR_1g112460 | 64.094 | 298 | 65 | 4 | 155 | 446 | 1 | 262 | 3.93e-124 | 362 |
| MS.gene001098.t1 | MTR_1g495735 | 74.129 | 201 | 42 | 1 | 240 | 430 | 106 | 306 | 3.35e-99 | 299 |
| MS.gene001098.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 4.80e-17 | 82.0 |
| MS.gene001098.t1 | MTR_6g080420 | 37.731 | 432 | 255 | 6 | 5 | 428 | 89 | 514 | 1.21e-96 | 300 |
| MS.gene001098.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 49 | 476 | 1.45e-93 | 291 |
| MS.gene001098.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 43 | 470 | 2.18e-93 | 290 |
| MS.gene001098.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 70 | 497 | 4.03e-93 | 290 |
| MS.gene001098.t1 | MTR_8g087950 | 35.566 | 433 | 270 | 6 | 7 | 433 | 275 | 704 | 2.05e-90 | 289 |
| MS.gene001098.t1 | MTR_8g087950 | 35.566 | 433 | 270 | 6 | 7 | 433 | 348 | 777 | 1.09e-89 | 289 |
| MS.gene001098.t1 | MTR_1g101880 | 86.364 | 154 | 21 | 0 | 1 | 154 | 1 | 154 | 1.19e-89 | 273 |
| MS.gene001098.t1 | MTR_4g054970 | 55.372 | 242 | 79 | 4 | 193 | 431 | 50 | 265 | 2.03e-79 | 248 |
| MS.gene001098.t1 | MTR_4g054970 | 77.273 | 44 | 10 | 0 | 1 | 44 | 1 | 44 | 4.58e-13 | 69.7 |
| MS.gene001098.t1 | MTR_1g024165 | 81.884 | 138 | 25 | 0 | 8 | 145 | 12 | 149 | 1.95e-78 | 240 |
| MS.gene001098.t1 | MTR_8g014950 | 75.490 | 102 | 25 | 0 | 3 | 104 | 4 | 105 | 2.57e-47 | 158 |
| MS.gene001098.t1 | MTR_7g094460 | 30.227 | 440 | 243 | 14 | 3 | 429 | 59 | 447 | 1.67e-45 | 164 |
| MS.gene001098.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 1.17e-42 | 149 |
| MS.gene001098.t1 | MTR_3g076660 | 30.631 | 444 | 247 | 15 | 3 | 429 | 88 | 487 | 5.23e-42 | 155 |
| MS.gene001098.t1 | MTR_2g021300 | 29.385 | 439 | 248 | 12 | 3 | 429 | 46 | 434 | 1.09e-41 | 153 |
| MS.gene001098.t1 | MTR_8g014960 | 62.195 | 82 | 31 | 0 | 213 | 294 | 2 | 83 | 2.88e-27 | 107 |
| MS.gene001098.t1 | MTR_3g097250 | 26.103 | 272 | 144 | 9 | 9 | 272 | 85 | 307 | 2.92e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene001098.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene001098.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene001098.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene001098.t1 | AT1G07920 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene001098.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene001098.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene001098.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene001098.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene001098.t1 | AT1G07930 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene001098.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
| MS.gene001098.t1 | AT1G07930 | 90.517 | 116 | 11 | 0 | 331 | 446 | 254 | 369 | 1.79e-68 | 223 |
| MS.gene001098.t1 | AT1G18070 | 37.412 | 425 | 258 | 5 | 5 | 424 | 99 | 520 | 6.59e-94 | 293 |
| MS.gene001098.t1 | AT1G18070 | 37.412 | 425 | 258 | 5 | 5 | 424 | 99 | 520 | 6.59e-94 | 293 |
| MS.gene001098.t1 | AT1G18070 | 36.697 | 436 | 257 | 6 | 5 | 424 | 99 | 531 | 1.04e-90 | 285 |
| MS.gene001098.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 1.84e-90 | 288 |
| MS.gene001098.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.88e-90 | 288 |
| MS.gene001098.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.88e-90 | 288 |
| MS.gene001098.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 9.81e-90 | 288 |
| MS.gene001098.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 1.10e-89 | 288 |
| MS.gene001098.t1 | AT1G35550 | 77.885 | 104 | 23 | 0 | 335 | 438 | 1 | 104 | 5.60e-54 | 176 |
| MS.gene001098.t1 | AT4G20360 | 30.594 | 438 | 255 | 10 | 3 | 429 | 75 | 474 | 1.27e-44 | 162 |
| MS.gene001098.t1 | AT4G20360 | 30.594 | 438 | 255 | 10 | 3 | 429 | 75 | 474 | 1.27e-44 | 162 |
| MS.gene001098.t1 | AT4G02930 | 29.977 | 437 | 249 | 13 | 3 | 429 | 63 | 452 | 2.02e-44 | 161 |
| MS.gene001098.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 1.60e-12 | 70.1 |
| MS.gene001098.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 2.25e-11 | 66.6 |
| MS.gene001098.t1 | AT5G08650 | 27.037 | 270 | 144 | 10 | 9 | 272 | 88 | 310 | 2.46e-11 | 66.2 |
| MS.gene001098.t1 | AT5G08650 | 27.037 | 270 | 144 | 10 | 9 | 272 | 88 | 310 | 2.73e-11 | 66.2 |
Find 138 sgRNAs with CRISPR-Local
Find 149 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCGGTATGGTTGTGACTTT+TGG | 0.190241 | 6.2:+15179152 | MS.gene001098:CDS |
| GGCTTGTCTGTGGGTCTCTT+TGG | 0.228629 | 6.2:-15179044 | None:intergenic |
| GTTGTGACATTACTTCTTCT+TGG | 0.266998 | 6.2:-15179699 | None:intergenic |
| GCTCTCACTGAAGCTCTTCC+AGG | 0.343392 | 6.2:+15179224 | MS.gene001098:CDS |
| GTCTCTTTGGCTCGTTGATC+TGG | 0.343863 | 6.2:-15179031 | None:intergenic |
| TTGCAAGATGTTTACAAGAT+TGG | 0.346171 | 6.2:+15179080 | MS.gene001098:CDS |
| TTCATCAAGAACATGATTAC+TGG | 0.350652 | 6.2:+15178393 | MS.gene001098:CDS |
| CATATCAACATTGTCGTCAT+TGG | 0.354281 | 6.2:+15178120 | MS.gene001098:CDS |
| ATCACCATTCTTCAAGAACT+TGG | 0.354818 | 6.2:-15179504 | None:intergenic |
| GTTTACAAGATTGGTGGTAT+TGG | 0.363154 | 6.2:+15179089 | MS.gene001098:CDS |
| CTTCTTCTTGGCAGCAGCCT+TGG | 0.371495 | 6.2:-15179687 | None:intergenic |
| AAGTTGGCAGCTTCCTTGGC+AGG | 0.382611 | 6.2:-15179329 | None:intergenic |
| GCTCTTCTTGCATTTACTCT+TGG | 0.389052 | 6.2:+15178510 | MS.gene001098:CDS |
| AGTGAAGTTGGCAGCTTCCT+TGG | 0.410082 | 6.2:-15179333 | None:intergenic |
| ACCTGGCCTTCGAGTACTTA+GGG | 0.418829 | 6.2:-15178845 | None:intergenic |
| ACCAGATCGCCTGTCAATCT+TGG | 0.419719 | 6.2:-15179462 | None:intergenic |
| TTCCTTGGCAGGGTCATCCT+TGG | 0.427055 | 6.2:-15179318 | None:intergenic |
| GTTCCCATCTCCGGATTTGA+AGG | 0.431146 | 6.2:+15178939 | MS.gene001098:CDS |
| AAGCCTGAGGGGCTTGTCTG+TGG | 0.432212 | 6.2:-15179054 | None:intergenic |
| TCTGGAAAATCAACAACAAC+TGG | 0.436226 | 6.2:+15178153 | MS.gene001098:CDS |
| AGCCTGAGGGGCTTGTCTGT+GGG | 0.440652 | 6.2:-15179053 | None:intergenic |
| ATGGGTTCTTGACAAACTTA+AGG | 0.442151 | 6.2:+15178272 | MS.gene001098:CDS |
| CATGTTGTCACCTTCAAATC+CGG | 0.442623 | 6.2:-15178949 | None:intergenic |
| TATCCGTTTCCGATCTGTCC+AGG | 0.445786 | 6.2:-15179380 | None:intergenic |
| CCGGTCTCAACACGTCCAAC+TGG | 0.449484 | 6.2:-15179119 | None:intergenic |
| ATTCCCTTCGTTCCCATCTC+CGG | 0.450165 | 6.2:+15178930 | MS.gene001098:CDS |
| GGCAGGGTCATCCTTGGAGT+TGG | 0.452433 | 6.2:-15179312 | None:intergenic |
| GGTCTCAACCACCATGGGCT+TGG | 0.458699 | 6.2:-15179552 | None:intergenic |
| CTTATCATTGACTCCACCAC+TGG | 0.461752 | 6.2:+15178441 | MS.gene001098:CDS |
| CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 6.2:-15179549 | None:intergenic |
| ACCAAGATTGACAGGCGATC+TGG | 0.474566 | 6.2:+15179461 | MS.gene001098:CDS |
| CAAGATGTTTACAAGATTGG+TGG | 0.475647 | 6.2:+15179083 | MS.gene001098:CDS |
| TAAGAACAGCACAATCAGCC+TGG | 0.478298 | 6.2:-15178422 | None:intergenic |
| CTTCACGATTTCATCGTACC+TGG | 0.484982 | 6.2:-15178862 | None:intergenic |
| CTTAAGGCTGAGCGTGAAAG+AGG | 0.490014 | 6.2:+15178288 | MS.gene001098:CDS |
| GTCATTGGACATGTCGACTC+TGG | 0.490675 | 6.2:+15178135 | MS.gene001098:CDS |
| CACCCTGGACAGATCGGAAA+CGG | 0.491987 | 6.2:+15179377 | MS.gene001098:CDS |
| GTCACCTTCAAATCCGGAGA+TGG | 0.495769 | 6.2:-15178943 | None:intergenic |
| AGTTTCATCCTACTTGAAGA+AGG | 0.496964 | 6.2:+15178887 | MS.gene001098:CDS |
| TCCAAAAGTCACAACCATAC+CGG | 0.497778 | 6.2:-15179153 | None:intergenic |
| CATCAAGGCTGTGGAGAAGA+AGG | 0.501366 | 6.2:+15179643 | MS.gene001098:CDS |
| CACCAACCTTGACTGGTACA+AGG | 0.502465 | 6.2:+15178983 | MS.gene001098:CDS |
| TCATCCTACTTGAAGAAGGT+TGG | 0.505639 | 6.2:+15178891 | MS.gene001098:CDS |
| AACTTGTTACCAAGATTGAC+AGG | 0.511236 | 6.2:+15179453 | MS.gene001098:CDS |
| GACCCACAGACAAGCCCCTC+AGG | 0.515484 | 6.2:+15179051 | MS.gene001098:CDS |
| GATTGACAGGCGATCTGGTA+AGG | 0.518046 | 6.2:+15179466 | MS.gene001098:CDS |
| CTTGTACCAGTCAAGGTTGG+TGG | 0.518944 | 6.2:-15178982 | None:intergenic |
| TACCTGGCCTTCGAGTACTT+AGG | 0.520657 | 6.2:-15178846 | None:intergenic |
| ATCATTGACTCCACCACTGG+TGG | 0.521304 | 6.2:+15178444 | MS.gene001098:CDS |
| AGAGGTCCACCAACCTTGAC+TGG | 0.523105 | 6.2:+15178976 | MS.gene001098:CDS |
| TTGAATCCGACATTGTCTCC+TGG | 0.526013 | 6.2:-15179242 | None:intergenic |
| TCAACCACCATGGGCTTGGT+GGG | 0.529820 | 6.2:-15179548 | None:intergenic |
| GAGCCCAAGTTCTTGAAGAA+TGG | 0.532631 | 6.2:+15179500 | MS.gene001098:CDS |
| AGCGTTCATTCAAGTACGCA+TGG | 0.534658 | 6.2:+15178253 | MS.gene001098:CDS |
| GTGGAGAAGAAGGATCCTAC+TGG | 0.535855 | 6.2:+15179653 | MS.gene001098:CDS |
| TCACCATTCTTCAAGAACTT+GGG | 0.540637 | 6.2:-15179503 | None:intergenic |
| CCAAAAGTCACAACCATACC+GGG | 0.540748 | 6.2:-15179152 | None:intergenic |
| GATGACTTGGGAAGTGAAGT+TGG | 0.546093 | 6.2:-15179345 | None:intergenic |
| TCCCTTGTACCAGTCAAGGT+TGG | 0.546130 | 6.2:-15178985 | None:intergenic |
| ATGCAAGAAGAGCGTGCTCA+CGG | 0.549857 | 6.2:-15178500 | None:intergenic |
| CGGTATTGTGAAGCCCGGTA+TGG | 0.551104 | 6.2:+15179139 | MS.gene001098:CDS |
| GAAGGATCCTACTGGAGCTA+AGG | 0.552001 | 6.2:+15179661 | MS.gene001098:CDS |
| CCCCTAAGTACTCGAAGGCC+AGG | 0.553487 | 6.2:+15178844 | MS.gene001098:CDS |
| TTCTTGAAGAATGGTGATGC+TGG | 0.554703 | 6.2:+15179509 | MS.gene001098:CDS |
| TGCACAGTCATTGATGCACC+TGG | 0.556287 | 6.2:+15178360 | MS.gene001098:CDS |
| ATCTTGCAATGGAAGCCTGA+GGG | 0.556985 | 6.2:-15179066 | None:intergenic |
| TGTTGCTGTTGGTGTCATCA+AGG | 0.557300 | 6.2:+15179628 | MS.gene001098:CDS |
| TCACCTTCAAATCCGGAGAT+GGG | 0.557788 | 6.2:-15178942 | None:intergenic |
| CATACCGGGCTTCACAATAC+CGG | 0.558131 | 6.2:-15179138 | None:intergenic |
| ACCAACCTTGACTGGTACAA+GGG | 0.559612 | 6.2:+15178984 | MS.gene001098:CDS |
| TTGATGAAATCACGATGTCC+AGG | 0.561637 | 6.2:-15178378 | None:intergenic |
| GTAACCAACCTTCTTCAAGT+AGG | 0.562921 | 6.2:-15178895 | None:intergenic |
| GCAAAGGTCTCAACCACCAT+GGG | 0.563446 | 6.2:-15179557 | None:intergenic |
| AGTTGGCAGCTTCCTTGGCA+GGG | 0.564600 | 6.2:-15179328 | None:intergenic |
| GGTGGTTCATGATGATGACT+TGG | 0.569890 | 6.2:-15179358 | None:intergenic |
| AGCTTCAAAACCACCAGTGG+TGG | 0.571917 | 6.2:-15178454 | None:intergenic |
| TTGGTCCCTTGTACCAGTCA+AGG | 0.575920 | 6.2:-15178989 | None:intergenic |
| AACTTCAGTTGTCAATCCAG+TGG | 0.577026 | 6.2:-15179177 | None:intergenic |
| GACTGTGCAGTAGTACTTGG+TGG | 0.578462 | 6.2:-15178346 | None:intergenic |
| TGCAAGAAGAGCGTGCTCAC+GGG | 0.579779 | 6.2:-15178499 | None:intergenic |
| TGTTAAGAATGTTGCTGTGA+AGG | 0.579878 | 6.2:+15179265 | MS.gene001098:CDS |
| ATGAACCACCCTGGACAGAT+CGG | 0.581582 | 6.2:+15179371 | MS.gene001098:CDS |
| CATGATTACTGGAACCTCCC+AGG | 0.581850 | 6.2:+15178404 | MS.gene001098:CDS |
| TCAAGAGCCTCAAGAAGAGT+TGG | 0.584894 | 6.2:-15179008 | None:intergenic |
| ATCCGTTTCCGATCTGTCCA+GGG | 0.587827 | 6.2:-15179379 | None:intergenic |
| AATGACTGTGCAGTAGTACT+TGG | 0.591989 | 6.2:-15178349 | None:intergenic |
| GAAGCTGGTATCTCTAAGGA+TGG | 0.592030 | 6.2:+15178471 | MS.gene001098:CDS |
| CCAGTTGGACGTGTTGAGAC+CGG | 0.592088 | 6.2:+15179119 | MS.gene001098:CDS |
| ATCTTGTAAACATCTTGCAA+TGG | 0.592677 | 6.2:-15179077 | None:intergenic |
| TTTGCTGAATATCCTCCACT+TGG | 0.598309 | 6.2:+15179575 | MS.gene001098:CDS |
| ACTTCAGTTGTCAATCCAGT+GGG | 0.599610 | 6.2:-15179176 | None:intergenic |
| GAGGTGTGGCAATCAAGCAC+TGG | 0.600600 | 6.2:-15179407 | None:intergenic |
| GGTCACTTGATCTACAAGCT+AGG | 0.604596 | 6.2:+15178174 | MS.gene001098:CDS |
| TTTCCACAAGGCAATATCGA+TGG | 0.606438 | 6.2:-15178316 | None:intergenic |
| AAGAACAGCACAATCAGCCT+GGG | 0.607202 | 6.2:-15178421 | None:intergenic |
| TGTTGGTGTCATCAAGGCTG+TGG | 0.608422 | 6.2:+15179634 | MS.gene001098:CDS |
| AAATCCGGAGATGGGAACGA+AGG | 0.610633 | 6.2:-15178934 | None:intergenic |
| GATGGTTCCCACCAAGCCCA+TGG | 0.611182 | 6.2:+15179541 | MS.gene001098:CDS |
| AATCCGGAGATGGGAACGAA+GGG | 0.611560 | 6.2:-15178933 | None:intergenic |
| GCGTTCATTCAAGTACGCAT+GGG | 0.615188 | 6.2:+15178254 | MS.gene001098:CDS |
| AGCAAAGGTCTCAACCACCA+TGG | 0.617611 | 6.2:-15179558 | None:intergenic |
| CTCCAAGGATGACCCTGCCA+AGG | 0.619064 | 6.2:+15179316 | MS.gene001098:CDS |
| TTTCGTTGCATCCAACTCCA+AGG | 0.619372 | 6.2:+15179301 | MS.gene001098:CDS |
| ATGCGTCAAACTGTTGCTGT+TGG | 0.619748 | 6.2:+15179617 | MS.gene001098:CDS |
| AAGGTGACAACATGATTGAG+AGG | 0.624581 | 6.2:+15178958 | MS.gene001098:CDS |
| GAGACCGGTATTGTGAAGCC+CGG | 0.625104 | 6.2:+15179134 | MS.gene001098:CDS |
| TCTTGCAATGGAAGCCTGAG+GGG | 0.631058 | 6.2:-15179065 | None:intergenic |
| CAAGGGACCAACTCTTCTTG+AGG | 0.634066 | 6.2:+15179001 | MS.gene001098:CDS |
| ATCTGGTAAGGAGATTGAGA+AGG | 0.634092 | 6.2:+15179478 | MS.gene001098:CDS |
| GATGATCTGTTGTTGTAACA+AGG | 0.635291 | 6.2:+15178542 | MS.gene001098:CDS |
| GTCATCATCATGAACCACCC+TGG | 0.635348 | 6.2:+15179362 | MS.gene001098:CDS |
| TGATGCTGGTATCATTAAGA+TGG | 0.636151 | 6.2:+15179523 | MS.gene001098:CDS |
| TGTGATCGAGAGATTCGAGA+AGG | 0.638590 | 6.2:+15178212 | MS.gene001098:CDS |
| CCTGGCCTTCGAGTACTTAG+GGG | 0.644615 | 6.2:-15178844 | None:intergenic |
| CACTTGATCTACAAGCTAGG+AGG | 0.645428 | 6.2:+15178177 | MS.gene001098:CDS |
| TTACCATCGATATTGCCTTG+TGG | 0.647445 | 6.2:+15178313 | MS.gene001098:CDS |
| TACTGGAGCTAAGGTCACCA+AGG | 0.647527 | 6.2:+15179670 | MS.gene001098:CDS |
| GGTATTGGAACTGTGCCAGT+TGG | 0.649080 | 6.2:+15179104 | MS.gene001098:CDS |
| GCTCTTCCAGGAGACAATGT+CGG | 0.651488 | 6.2:+15179236 | MS.gene001098:CDS |
| AAACTTCACAGCAATGTGAG+AGG | 0.653594 | 6.2:-15179426 | None:intergenic |
| AACAGCACAATCAGCCTGGG+AGG | 0.653730 | 6.2:-15178418 | None:intergenic |
| CATCTTGCAATGGAAGCCTG+AGG | 0.654491 | 6.2:-15179067 | None:intergenic |
| ACAGCAAAACGTCCAAGTGG+AGG | 0.656142 | 6.2:-15179587 | None:intergenic |
| GGCCTTCGAGTACTTAGGGG+TGG | 0.657553 | 6.2:-15178841 | None:intergenic |
| CAGGTACGATGAAATCGTGA+AGG | 0.661162 | 6.2:+15178863 | MS.gene001098:CDS |
| TTGGTGACCTTAGCTCCAGT+AGG | 0.661771 | 6.2:-15179668 | None:intergenic |
| ACCAGCTTCAAAACCACCAG+TGG | 0.669846 | 6.2:-15178457 | None:intergenic |
| TCACAGCAATGTGAGAGGTG+TGG | 0.670228 | 6.2:-15179421 | None:intergenic |
| AAGTGGAGGATATTCAGCAA+AGG | 0.671437 | 6.2:-15179573 | None:intergenic |
| CGTTTCCGATCTGTCCAGGG+TGG | 0.684114 | 6.2:-15179376 | None:intergenic |
| CTGACAGCAAAACGTCCAAG+TGG | 0.689307 | 6.2:-15179590 | None:intergenic |
| GTGGTTCATGATGATGACTT+GGG | 0.690284 | 6.2:-15179357 | None:intergenic |
| TACCACCCCTAAGTACTCGA+AGG | 0.691722 | 6.2:+15178839 | MS.gene001098:CDS |
| GGTGGTCTCAAATTTCCACA+AGG | 0.697133 | 6.2:-15178328 | None:intergenic |
| GTCTGTTGAGATGCACCACG+AGG | 0.705830 | 6.2:+15179202 | MS.gene001098:CDS |
| GCTGTGAAGGATCTCAAGCG+TGG | 0.706441 | 6.2:+15179278 | MS.gene001098:CDS |
| GGTTCCCACCAAGCCCATGG+TGG | 0.716413 | 6.2:+15179544 | MS.gene001098:CDS |
| GAGCTTCAGTGAGAGCCTCG+TGG | 0.728674 | 6.2:-15179217 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTCAATATTTTGTTTCAGA+TGG | + | chr6.2:15178812-15178831 | MS.gene001098:intron | 20.0% |
| ! | AAATTAGTTACAGTCTGTTA+AGG | + | chr6.2:15178638-15178657 | MS.gene001098:intron | 25.0% |
| ATCTTGTAAACATCTTGCAA+TGG | - | chr6.2:15179080-15179099 | None:intergenic | 30.0% | |
| TTCATCAAGAACATGATTAC+TGG | + | chr6.2:15178393-15178412 | MS.gene001098:CDS | 30.0% | |
| TTGCAAGATGTTTACAAGAT+TGG | + | chr6.2:15179080-15179099 | MS.gene001098:CDS | 30.0% | |
| ! | TACTAAATATGTTGAGTTGC+AGG | + | chr6.2:15178610-15178629 | MS.gene001098:intron | 30.0% |
| !! | TTATTTGCTGATTCTGACTT+TGG | + | chr6.2:15178698-15178717 | MS.gene001098:intron | 30.0% |
| AGTTTCATCCTACTTGAAGA+AGG | + | chr6.2:15178887-15178906 | MS.gene001098:CDS | 35.0% | |
| ATCACCATTCTTCAAGAACT+TGG | - | chr6.2:15179507-15179526 | None:intergenic | 35.0% | |
| ATGGGTTCTTGACAAACTTA+AGG | + | chr6.2:15178272-15178291 | MS.gene001098:CDS | 35.0% | |
| CAAGATGTTTACAAGATTGG+TGG | + | chr6.2:15179083-15179102 | MS.gene001098:CDS | 35.0% | |
| CATATCAACATTGTCGTCAT+TGG | + | chr6.2:15178120-15178139 | MS.gene001098:CDS | 35.0% | |
| CTAGTTGTAGATTCTGACTT+TGG | + | chr6.2:15178789-15178808 | MS.gene001098:intron | 35.0% | |
| GATGATCTGTTGTTGTAACA+AGG | + | chr6.2:15178542-15178561 | MS.gene001098:CDS | 35.0% | |
| TCACCATTCTTCAAGAACTT+GGG | - | chr6.2:15179506-15179525 | None:intergenic | 35.0% | |
| TCTGGAAAATCAACAACAAC+TGG | + | chr6.2:15178153-15178172 | MS.gene001098:CDS | 35.0% | |
| TGATGCTGGTATCATTAAGA+TGG | + | chr6.2:15179523-15179542 | MS.gene001098:CDS | 35.0% | |
| TGTTAAGAATGTTGCTGTGA+AGG | + | chr6.2:15179265-15179284 | MS.gene001098:CDS | 35.0% | |
| ! | GTTTACAAGATTGGTGGTAT+TGG | + | chr6.2:15179089-15179108 | MS.gene001098:CDS | 35.0% |
| !! | AACTTGTTACCAAGATTGAC+AGG | + | chr6.2:15179453-15179472 | MS.gene001098:CDS | 35.0% |
| !!! | TTTTGAAGCTGGTATCTCTA+AGG | + | chr6.2:15178467-15178486 | MS.gene001098:CDS | 35.0% |
| AAACTTCACAGCAATGTGAG+AGG | - | chr6.2:15179429-15179448 | None:intergenic | 40.0% | |
| AACTTCAGTTGTCAATCCAG+TGG | - | chr6.2:15179180-15179199 | None:intergenic | 40.0% | |
| AAGGTGACAACATGATTGAG+AGG | + | chr6.2:15178958-15178977 | MS.gene001098:CDS | 40.0% | |
| AAGTGGAGGATATTCAGCAA+AGG | - | chr6.2:15179576-15179595 | None:intergenic | 40.0% | |
| AATGACTGTGCAGTAGTACT+TGG | - | chr6.2:15178352-15178371 | None:intergenic | 40.0% | |
| ACTTCAGTTGTCAATCCAGT+GGG | - | chr6.2:15179179-15179198 | None:intergenic | 40.0% | |
| ATCTGGTAAGGAGATTGAGA+AGG | + | chr6.2:15179478-15179497 | MS.gene001098:CDS | 40.0% | |
| CATGTTGTCACCTTCAAATC+CGG | - | chr6.2:15178952-15178971 | None:intergenic | 40.0% | |
| GCTCTTCTTGCATTTACTCT+TGG | + | chr6.2:15178510-15178529 | MS.gene001098:CDS | 40.0% | |
| GTAACCAACCTTCTTCAAGT+AGG | - | chr6.2:15178898-15178917 | None:intergenic | 40.0% | |
| TCATCCTACTTGAAGAAGGT+TGG | + | chr6.2:15178891-15178910 | MS.gene001098:CDS | 40.0% | |
| TCCAAAAGTCACAACCATAC+CGG | - | chr6.2:15179156-15179175 | None:intergenic | 40.0% | |
| TTACCATCGATATTGCCTTG+TGG | + | chr6.2:15178313-15178332 | MS.gene001098:CDS | 40.0% | |
| TTGATGAAATCACGATGTCC+AGG | - | chr6.2:15178381-15178400 | None:intergenic | 40.0% | |
| TTTCCACAAGGCAATATCGA+TGG | - | chr6.2:15178319-15178338 | None:intergenic | 40.0% | |
| TTTGCTGAATATCCTCCACT+TGG | + | chr6.2:15179575-15179594 | MS.gene001098:CDS | 40.0% | |
| ! | GAACGAAGGGAATTTTGTCT+GGG | - | chr6.2:15178923-15178942 | None:intergenic | 40.0% |
| ! | GTGGTTCATGATGATGACTT+GGG | - | chr6.2:15179360-15179379 | None:intergenic | 40.0% |
| ! | TTCTTGAAGAATGGTGATGC+TGG | + | chr6.2:15179509-15179528 | MS.gene001098:CDS | 40.0% |
| AAGAACAGCACAATCAGCCT+GGG | - | chr6.2:15178424-15178443 | None:intergenic | 45.0% | |
| ACCAACCTTGACTGGTACAA+GGG | + | chr6.2:15178984-15179003 | MS.gene001098:CDS | 45.0% | |
| AGCGTTCATTCAAGTACGCA+TGG | + | chr6.2:15178253-15178272 | MS.gene001098:CDS | 45.0% | |
| ATCTTGCAATGGAAGCCTGA+GGG | - | chr6.2:15179069-15179088 | None:intergenic | 45.0% | |
| ATGCGTCAAACTGTTGCTGT+TGG | + | chr6.2:15179617-15179636 | MS.gene001098:CDS | 45.0% | |
| CACTTGATCTACAAGCTAGG+AGG | + | chr6.2:15178177-15178196 | MS.gene001098:CDS | 45.0% | |
| CAGGTACGATGAAATCGTGA+AGG | + | chr6.2:15178863-15178882 | MS.gene001098:CDS | 45.0% | |
| CCAAAAGTCACAACCATACC+GGG | - | chr6.2:15179155-15179174 | None:intergenic | 45.0% | |
| CTTCACGATTTCATCGTACC+TGG | - | chr6.2:15178865-15178884 | None:intergenic | 45.0% | |
| GAGCCCAAGTTCTTGAAGAA+TGG | + | chr6.2:15179500-15179519 | MS.gene001098:CDS | 45.0% | |
| GCGTTCATTCAAGTACGCAT+GGG | + | chr6.2:15178254-15178273 | MS.gene001098:CDS | 45.0% | |
| GGTCACTTGATCTACAAGCT+AGG | + | chr6.2:15178174-15178193 | MS.gene001098:CDS | 45.0% | |
| GGTGGTCTCAAATTTCCACA+AGG | - | chr6.2:15178331-15178350 | None:intergenic | 45.0% | |
| TAAGAACAGCACAATCAGCC+TGG | - | chr6.2:15178425-15178444 | None:intergenic | 45.0% | |
| TCAAGAGCCTCAAGAAGAGT+TGG | - | chr6.2:15179011-15179030 | None:intergenic | 45.0% | |
| TCACCTTCAAATCCGGAGAT+GGG | - | chr6.2:15178945-15178964 | None:intergenic | 45.0% | |
| TGTGATCGAGAGATTCGAGA+AGG | + | chr6.2:15178212-15178231 | MS.gene001098:CDS | 45.0% | |
| TTGAATCCGACATTGTCTCC+TGG | - | chr6.2:15179245-15179264 | None:intergenic | 45.0% | |
| TTTCGTTGCATCCAACTCCA+AGG | + | chr6.2:15179301-15179320 | MS.gene001098:CDS | 45.0% | |
| ! | GAAGCTGGTATCTCTAAGGA+TGG | + | chr6.2:15178471-15178490 | MS.gene001098:CDS | 45.0% |
| ! | GATGACTTGGGAAGTGAAGT+TGG | - | chr6.2:15179348-15179367 | None:intergenic | 45.0% |
| ! | GGAACGAAGGGAATTTTGTC+TGG | - | chr6.2:15178924-15178943 | None:intergenic | 45.0% |
| ! | GGTGGTTCATGATGATGACT+TGG | - | chr6.2:15179361-15179380 | None:intergenic | 45.0% |
| !! | ACTTGGACGTTTTGCTGTCA+GGG | + | chr6.2:15179592-15179611 | MS.gene001098:CDS | 45.0% |
| !! | CTTATCATTGACTCCACCAC+TGG | + | chr6.2:15178441-15178460 | MS.gene001098:CDS | 45.0% |
| !! | TGTTGCTGTTGGTGTCATCA+AGG | + | chr6.2:15179628-15179647 | MS.gene001098:CDS | 45.0% |
| AAATCCGGAGATGGGAACGA+AGG | - | chr6.2:15178937-15178956 | None:intergenic | 50.0% | |
| AATCCGGAGATGGGAACGAA+GGG | - | chr6.2:15178936-15178955 | None:intergenic | 50.0% | |
| ACAGCAAAACGTCCAAGTGG+AGG | - | chr6.2:15179590-15179609 | None:intergenic | 50.0% | |
| ACCAAGATTGACAGGCGATC+TGG | + | chr6.2:15179461-15179480 | MS.gene001098:CDS | 50.0% | |
| ACCAGATCGCCTGTCAATCT+TGG | - | chr6.2:15179465-15179484 | None:intergenic | 50.0% | |
| ACCAGCTTCAAAACCACCAG+TGG | - | chr6.2:15178460-15178479 | None:intergenic | 50.0% | |
| AGCAAAGGTCTCAACCACCA+TGG | - | chr6.2:15179561-15179580 | None:intergenic | 50.0% | |
| AGCTTCAAAACCACCAGTGG+TGG | - | chr6.2:15178457-15178476 | None:intergenic | 50.0% | |
| AGTGAAGTTGGCAGCTTCCT+TGG | - | chr6.2:15179336-15179355 | None:intergenic | 50.0% | |
| ATCCGTTTCCGATCTGTCCA+GGG | - | chr6.2:15179382-15179401 | None:intergenic | 50.0% | |
| ATGAACCACCCTGGACAGAT+CGG | + | chr6.2:15179371-15179390 | MS.gene001098:CDS | 50.0% | |
| ATTCCCTTCGTTCCCATCTC+CGG | + | chr6.2:15178930-15178949 | MS.gene001098:CDS | 50.0% | |
| CAAGGGACCAACTCTTCTTG+AGG | + | chr6.2:15179001-15179020 | MS.gene001098:CDS | 50.0% | |
| CACCAACCTTGACTGGTACA+AGG | + | chr6.2:15178983-15179002 | MS.gene001098:CDS | 50.0% | |
| CATACCGGGCTTCACAATAC+CGG | - | chr6.2:15179141-15179160 | None:intergenic | 50.0% | |
| CATCAAGGCTGTGGAGAAGA+AGG | + | chr6.2:15179643-15179662 | MS.gene001098:CDS | 50.0% | |
| CATCTTGCAATGGAAGCCTG+AGG | - | chr6.2:15179070-15179089 | None:intergenic | 50.0% | |
| CATGATTACTGGAACCTCCC+AGG | + | chr6.2:15178404-15178423 | MS.gene001098:CDS | 50.0% | |
| CTGACAGCAAAACGTCCAAG+TGG | - | chr6.2:15179593-15179612 | None:intergenic | 50.0% | |
| CTTAAGGCTGAGCGTGAAAG+AGG | + | chr6.2:15178288-15178307 | MS.gene001098:CDS | 50.0% | |
| CTTGTACCAGTCAAGGTTGG+TGG | - | chr6.2:15178985-15179004 | None:intergenic | 50.0% | |
| GAAGGATCCTACTGGAGCTA+AGG | + | chr6.2:15179661-15179680 | MS.gene001098:CDS | 50.0% | |
| GACTGTGCAGTAGTACTTGG+TGG | - | chr6.2:15178349-15178368 | None:intergenic | 50.0% | |
| GATTGACAGGCGATCTGGTA+AGG | + | chr6.2:15179466-15179485 | MS.gene001098:CDS | 50.0% | |
| GCAAAGGTCTCAACCACCAT+GGG | - | chr6.2:15179560-15179579 | None:intergenic | 50.0% | |
| GCTCTTCCAGGAGACAATGT+CGG | + | chr6.2:15179236-15179255 | MS.gene001098:CDS | 50.0% | |
| GTCACCTTCAAATCCGGAGA+TGG | - | chr6.2:15178946-15178965 | None:intergenic | 50.0% | |
| GTCATCATCATGAACCACCC+TGG | + | chr6.2:15179362-15179381 | MS.gene001098:CDS | 50.0% | |
| GTGGAGAAGAAGGATCCTAC+TGG | + | chr6.2:15179653-15179672 | MS.gene001098:CDS | 50.0% | |
| GTTCCCATCTCCGGATTTGA+AGG | + | chr6.2:15178939-15178958 | MS.gene001098:CDS | 50.0% | |
| TACCACCCCTAAGTACTCGA+AGG | + | chr6.2:15178839-15178858 | MS.gene001098:CDS | 50.0% | |
| TACTGGAGCTAAGGTCACCA+AGG | + | chr6.2:15179670-15179689 | MS.gene001098:CDS | 50.0% | |
| TATCCGTTTCCGATCTGTCC+AGG | - | chr6.2:15179383-15179402 | None:intergenic | 50.0% | |
| TCACAGCAATGTGAGAGGTG+TGG | - | chr6.2:15179424-15179443 | None:intergenic | 50.0% | |
| TCCCTTGTACCAGTCAAGGT+TGG | - | chr6.2:15178988-15179007 | None:intergenic | 50.0% | |
| TCTTGCAATGGAAGCCTGAG+GGG | - | chr6.2:15179068-15179087 | None:intergenic | 50.0% | |
| TGCACAGTCATTGATGCACC+TGG | + | chr6.2:15178360-15178379 | MS.gene001098:CDS | 50.0% | |
| TTGGTCCCTTGTACCAGTCA+AGG | - | chr6.2:15178992-15179011 | None:intergenic | 50.0% | |
| ! | ACCTGGCCTTCGAGTACTTA+GGG | - | chr6.2:15178848-15178867 | None:intergenic | 50.0% |
| ! | ATGCAAGAAGAGCGTGCTCA+CGG | - | chr6.2:15178503-15178522 | None:intergenic | 50.0% |
| ! | CCCGGTATGGTTGTGACTTT+TGG | + | chr6.2:15179152-15179171 | MS.gene001098:CDS | 50.0% |
| ! | GGTATTGGAACTGTGCCAGT+TGG | + | chr6.2:15179104-15179123 | MS.gene001098:CDS | 50.0% |
| ! | GTCTCTTTGGCTCGTTGATC+TGG | - | chr6.2:15179034-15179053 | None:intergenic | 50.0% |
| ! | GTTGTGACTTTTGGACCCAC+TGG | + | chr6.2:15179161-15179180 | MS.gene001098:CDS | 50.0% |
| ! | TACCTGGCCTTCGAGTACTT+AGG | - | chr6.2:15178849-15178868 | None:intergenic | 50.0% |
| ! | TTGGTGACCTTAGCTCCAGT+AGG | - | chr6.2:15179671-15179690 | None:intergenic | 50.0% |
| !! | ATCATTGACTCCACCACTGG+TGG | + | chr6.2:15178444-15178463 | MS.gene001098:CDS | 50.0% |
| !! | CACTTGGACGTTTTGCTGTC+AGG | + | chr6.2:15179591-15179610 | MS.gene001098:CDS | 50.0% |
| !! | GTCATTGGACATGTCGACTC+TGG | + | chr6.2:15178135-15178154 | MS.gene001098:CDS | 50.0% |
| !! | TGTTGGTGTCATCAAGGCTG+TGG | + | chr6.2:15179634-15179653 | MS.gene001098:CDS | 50.0% |
| !!! | ACCACTGGTGGTTTTGAAGC+TGG | + | chr6.2:15178456-15178475 | MS.gene001098:CDS | 50.0% |
| AACAGCACAATCAGCCTGGG+AGG | - | chr6.2:15178421-15178440 | None:intergenic | 55.0% | |
| AAGTTGGCAGCTTCCTTGGC+AGG | - | chr6.2:15179332-15179351 | None:intergenic | 55.0% | |
| AGAGGTCCACCAACCTTGAC+TGG | + | chr6.2:15178976-15178995 | MS.gene001098:CDS | 55.0% | |
| AGTTGGCAGCTTCCTTGGCA+GGG | - | chr6.2:15179331-15179350 | None:intergenic | 55.0% | |
| CACCCTGGACAGATCGGAAA+CGG | + | chr6.2:15179377-15179396 | MS.gene001098:CDS | 55.0% | |
| CCAGTTGGACGTGTTGAGAC+CGG | + | chr6.2:15179119-15179138 | MS.gene001098:CDS | 55.0% | |
| CGGTATTGTGAAGCCCGGTA+TGG | + | chr6.2:15179139-15179158 | MS.gene001098:CDS | 55.0% | |
| CTTCTTCTTGGCAGCAGCCT+TGG | - | chr6.2:15179690-15179709 | None:intergenic | 55.0% | |
| GAGACCGGTATTGTGAAGCC+CGG | + | chr6.2:15179134-15179153 | MS.gene001098:CDS | 55.0% | |
| GAGGTGTGGCAATCAAGCAC+TGG | - | chr6.2:15179410-15179429 | None:intergenic | 55.0% | |
| GCTCTCACTGAAGCTCTTCC+AGG | + | chr6.2:15179224-15179243 | MS.gene001098:CDS | 55.0% | |
| GCTGTGAAGGATCTCAAGCG+TGG | + | chr6.2:15179278-15179297 | MS.gene001098:CDS | 55.0% | |
| GGCTTGTCTGTGGGTCTCTT+TGG | - | chr6.2:15179047-15179066 | None:intergenic | 55.0% | |
| GTCTGTTGAGATGCACCACG+AGG | + | chr6.2:15179202-15179221 | MS.gene001098:CDS | 55.0% | |
| TTCCTTGGCAGGGTCATCCT+TGG | - | chr6.2:15179321-15179340 | None:intergenic | 55.0% | |
| ! | CCTGGCCTTCGAGTACTTAG+GGG | - | chr6.2:15178847-15178866 | None:intergenic | 55.0% |
| ! | TCAACCACCATGGGCTTGGT+GGG | - | chr6.2:15179551-15179570 | None:intergenic | 55.0% |
| ! | TGCAAGAAGAGCGTGCTCAC+GGG | - | chr6.2:15178502-15178521 | None:intergenic | 55.0% |
| AAGCCTGAGGGGCTTGTCTG+TGG | - | chr6.2:15179057-15179076 | None:intergenic | 60.0% | |
| AGCCTGAGGGGCTTGTCTGT+GGG | - | chr6.2:15179056-15179075 | None:intergenic | 60.0% | |
| CCCCTAAGTACTCGAAGGCC+AGG | + | chr6.2:15178844-15178863 | MS.gene001098:CDS | 60.0% | |
| CCGGTCTCAACACGTCCAAC+TGG | - | chr6.2:15179122-15179141 | None:intergenic | 60.0% | |
| CGTTTCCGATCTGTCCAGGG+TGG | - | chr6.2:15179379-15179398 | None:intergenic | 60.0% | |
| CTCAACCACCATGGGCTTGG+TGG | - | chr6.2:15179552-15179571 | None:intergenic | 60.0% | |
| CTCCAAGGATGACCCTGCCA+AGG | + | chr6.2:15179316-15179335 | MS.gene001098:CDS | 60.0% | |
| GAGCTTCAGTGAGAGCCTCG+TGG | - | chr6.2:15179220-15179239 | None:intergenic | 60.0% | |
| GATGGTTCCCACCAAGCCCA+TGG | + | chr6.2:15179541-15179560 | MS.gene001098:CDS | 60.0% | |
| GGCAGGGTCATCCTTGGAGT+TGG | - | chr6.2:15179315-15179334 | None:intergenic | 60.0% | |
| GGCCTTCGAGTACTTAGGGG+TGG | - | chr6.2:15178844-15178863 | None:intergenic | 60.0% | |
| GGTCTCAACCACCATGGGCT+TGG | - | chr6.2:15179555-15179574 | None:intergenic | 60.0% | |
| GACCCACAGACAAGCCCCTC+AGG | + | chr6.2:15179051-15179070 | MS.gene001098:CDS | 65.0% | |
| GGTTCCCACCAAGCCCATGG+TGG | + | chr6.2:15179544-15179563 | MS.gene001098:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 15178102 | 15179712 | 15178102 | ID=MS.gene001098 |
| chr6.2 | mRNA | 15178102 | 15179712 | 15178102 | ID=MS.gene001098.t1;Parent=MS.gene001098 |
| chr6.2 | exon | 15178102 | 15178563 | 15178102 | ID=MS.gene001098.t1.exon1;Parent=MS.gene001098.t1 |
| chr6.2 | CDS | 15178102 | 15178563 | 15178102 | ID=cds.MS.gene001098.t1;Parent=MS.gene001098.t1 |
| chr6.2 | exon | 15178831 | 15179712 | 15178831 | ID=MS.gene001098.t1.exon2;Parent=MS.gene001098.t1 |
| chr6.2 | CDS | 15178831 | 15179712 | 15178831 | ID=cds.MS.gene001098.t1;Parent=MS.gene001098.t1 |
| Gene Sequence |
| Protein sequence |