Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34006.t1 | XP_003591959.2 | 99.6 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 1.70E-258 | 901.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34006.t1 | O64937 | 96.7 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 6.5e-254 | 877.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34006.t1 | G7I9L3 | 99.6 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 1.3e-258 | 901.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34006.t1 | MTR_1g495705 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 916 |
MS.gene34006.t1 | MTR_1g095650 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 916 |
MS.gene34006.t1 | MTR_1g095703 | 99.330 | 448 | 3 | 0 | 1 | 448 | 1 | 448 | 0.0 | 915 |
MS.gene34006.t1 | MTR_6g021800 | 96.652 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 0.0 | 896 |
MS.gene34006.t1 | MTR_6g021805 | 96.652 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 0.0 | 896 |
MS.gene34006.t1 | MTR_4g014810 | 96.205 | 448 | 16 | 1 | 1 | 448 | 1 | 447 | 0.0 | 890 |
MS.gene34006.t1 | MTR_1g013680 | 95.565 | 451 | 17 | 1 | 1 | 448 | 1 | 451 | 0.0 | 879 |
MS.gene34006.t1 | MTR_1g085410 | 81.674 | 442 | 81 | 0 | 1 | 442 | 1 | 442 | 0.0 | 746 |
MS.gene34006.t1 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 736 |
MS.gene34006.t1 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 734 |
MS.gene34006.t1 | MTR_1g024175 | 79.263 | 434 | 90 | 0 | 1 | 434 | 1 | 434 | 0.0 | 728 |
MS.gene34006.t1 | MTR_8g014590 | 79.733 | 449 | 89 | 1 | 1 | 447 | 1 | 449 | 0.0 | 723 |
MS.gene34006.t1 | MTR_1g095650 | 99.424 | 347 | 2 | 0 | 102 | 448 | 1 | 347 | 0.0 | 708 |
MS.gene34006.t1 | MTR_2g082730 | 72.644 | 435 | 102 | 2 | 1 | 433 | 1 | 420 | 0.0 | 645 |
MS.gene34006.t1 | MTR_5g037350 | 67.660 | 470 | 115 | 1 | 3 | 435 | 13 | 482 | 0.0 | 634 |
MS.gene34006.t1 | MTR_1g089520 | 71.395 | 430 | 105 | 3 | 4 | 432 | 5 | 417 | 0.0 | 627 |
MS.gene34006.t1 | MTR_2g082665 | 67.586 | 435 | 98 | 2 | 1 | 433 | 1 | 394 | 0.0 | 587 |
MS.gene34006.t1 | MTR_2g037420 | 65.820 | 433 | 105 | 3 | 1 | 431 | 1 | 392 | 0.0 | 563 |
MS.gene34006.t1 | MTR_2g080210 | 63.839 | 448 | 119 | 5 | 1 | 445 | 1 | 408 | 0.0 | 551 |
MS.gene34006.t1 | MTR_8g013910 | 63.920 | 449 | 127 | 5 | 1 | 433 | 1 | 430 | 0.0 | 551 |
MS.gene34006.t1 | MTR_8g008740 | 78.462 | 325 | 69 | 1 | 1 | 324 | 1 | 325 | 0.0 | 539 |
MS.gene34006.t1 | MTR_1g112460 | 66.443 | 298 | 59 | 4 | 155 | 447 | 1 | 262 | 2.52e-128 | 372 |
MS.gene34006.t1 | MTR_1g495735 | 76.119 | 201 | 38 | 1 | 240 | 430 | 106 | 306 | 1.46e-100 | 303 |
MS.gene34006.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 5.46e-17 | 81.6 |
MS.gene34006.t1 | MTR_6g080420 | 37.963 | 432 | 254 | 6 | 5 | 428 | 89 | 514 | 6.09e-97 | 301 |
MS.gene34006.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 49 | 476 | 7.36e-94 | 291 |
MS.gene34006.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 43 | 470 | 9.95e-94 | 291 |
MS.gene34006.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 70 | 497 | 1.86e-93 | 291 |
MS.gene34006.t1 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 275 | 704 | 2.65e-91 | 291 |
MS.gene34006.t1 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 348 | 777 | 2.21e-90 | 291 |
MS.gene34006.t1 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 6.53e-90 | 274 |
MS.gene34006.t1 | MTR_4g054970 | 57.025 | 242 | 75 | 4 | 193 | 431 | 50 | 265 | 6.41e-81 | 251 |
MS.gene34006.t1 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 7.81e-13 | 68.9 |
MS.gene34006.t1 | MTR_1g024165 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 1.45e-78 | 241 |
MS.gene34006.t1 | MTR_8g014950 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 1.65e-47 | 159 |
MS.gene34006.t1 | MTR_7g094460 | 30.365 | 438 | 245 | 14 | 3 | 429 | 59 | 447 | 1.59e-45 | 164 |
MS.gene34006.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 7.51e-43 | 149 |
MS.gene34006.t1 | MTR_2g021300 | 29.613 | 439 | 247 | 12 | 3 | 429 | 46 | 434 | 5.26e-42 | 154 |
MS.gene34006.t1 | MTR_3g076660 | 29.955 | 444 | 250 | 15 | 3 | 429 | 88 | 487 | 1.61e-40 | 151 |
MS.gene34006.t1 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 213 | 294 | 2 | 83 | 2.64e-28 | 110 |
MS.gene34006.t1 | MTR_3g097250 | 26.471 | 272 | 143 | 9 | 9 | 272 | 85 | 307 | 1.38e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene34006.t1 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene34006.t1 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene34006.t1 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene34006.t1 | AT1G07920 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene34006.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene34006.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene34006.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene34006.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene34006.t1 | AT1G07930 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene34006.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
MS.gene34006.t1 | AT1G07930 | 88.034 | 117 | 13 | 1 | 331 | 447 | 254 | 369 | 1.10e-65 | 215 |
MS.gene34006.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.39e-94 | 294 |
MS.gene34006.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.39e-94 | 294 |
MS.gene34006.t1 | AT1G18070 | 36.927 | 436 | 256 | 6 | 5 | 424 | 99 | 531 | 3.96e-91 | 286 |
MS.gene34006.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 2.20e-90 | 288 |
MS.gene34006.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 2.25e-90 | 288 |
MS.gene34006.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 2.25e-90 | 288 |
MS.gene34006.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 1.28e-89 | 288 |
MS.gene34006.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 1.34e-89 | 288 |
MS.gene34006.t1 | AT1G35550 | 78.641 | 103 | 22 | 0 | 335 | 437 | 1 | 103 | 1.58e-53 | 174 |
MS.gene34006.t1 | AT4G02930 | 30.296 | 439 | 245 | 15 | 3 | 429 | 63 | 452 | 7.25e-44 | 160 |
MS.gene34006.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 1.66e-43 | 159 |
MS.gene34006.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 1.66e-43 | 159 |
MS.gene34006.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 3.22e-12 | 68.9 |
MS.gene34006.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.25e-11 | 66.6 |
MS.gene34006.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.32e-11 | 66.2 |
MS.gene34006.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 4.64e-11 | 65.5 |
Find 148 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCACCATTCTTCAAGAATT+TGG | 0.066665 | 1.4:+74372781 | None:intergenic |
GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 1.4:-74373625 | MS.gene34006:CDS |
GTCTACAAGATTGGAGGAAT+TGG | 0.315206 | 1.4:-74373196 | MS.gene34006:CDS |
GCCTCTTAGGCTCATTGATT+TGG | 0.315866 | 1.4:+74373254 | None:intergenic |
TGTCAAGAATGTTGCTGTTA+AGG | 0.325240 | 1.4:-74373020 | MS.gene34006:CDS |
TCACCATTCTTCAAGAATTT+GGG | 0.331757 | 1.4:+74372782 | None:intergenic |
ATAGCCAACCTTCTTCAAAT+AGG | 0.332380 | 1.4:+74373390 | None:intergenic |
ATTCCATTTGTTCCCATCTC+TGG | 0.368209 | 1.4:-74373355 | MS.gene34006:CDS |
AAGCTCGCAGCCTCCTTGGC+TGG | 0.368924 | 1.4:+74372956 | None:intergenic |
CTTCTTCTTCAATGCTGACT+TGG | 0.371330 | 1.4:+74372595 | None:intergenic |
CTCCTTGGCTGGGTCATCCT+TGG | 0.371873 | 1.4:+74372967 | None:intergenic |
ATATCTACCCTTGGAGTACT+TGG | 0.380807 | 1.4:+74373438 | None:intergenic |
ACTAAGATTGATAGGCGTTC+TGG | 0.382761 | 1.4:-74372824 | MS.gene34006:CDS |
GCTCTAACAGAGGCCCTTCC+TGG | 0.389893 | 1.4:-74373061 | MS.gene34006:CDS |
GGATCCCAGTGGAGGACTTA+AGG | 0.415493 | 1.4:-74372621 | MS.gene34006:CDS |
GCAAAAGTGACAACCATTCC+AGG | 0.418006 | 1.4:+74373133 | None:intergenic |
CTCATCATTGATTCCACTAC+TGG | 0.419293 | 1.4:-74373694 | MS.gene34006:CDS |
GAGGTGTGGCAGTCAAGAAC+AGG | 0.420700 | 1.4:+74372878 | None:intergenic |
ATGAATCACCCTGGCCAGAT+TGG | 0.425183 | 1.4:-74372914 | MS.gene34006:CDS |
CCTGTGGGGCGTGTCGAGAC+TGG | 0.431830 | 1.4:-74373166 | MS.gene34006:CDS |
CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 1.4:-74372908 | MS.gene34006:CDS |
GCCCCTTCGACTACCACTTC+AGG | 0.433104 | 1.4:-74373221 | MS.gene34006:CDS |
GTCATCGGCCATGTTGACTC+TGG | 0.440627 | 1.4:-74374000 | MS.gene34006:CDS |
AGGACTAATGGGTAAGGAAA+AGG | 0.440646 | 1.4:-74374040 | None:intergenic |
AGCGTTCATTCAAGTATGCC+TGG | 0.444655 | 1.4:-74373882 | MS.gene34006:CDS |
GGGCATAGCCATTTCCAATC+TGG | 0.448022 | 1.4:+74372900 | None:intergenic |
AGCTCGCAGCCTCCTTGGCT+GGG | 0.449031 | 1.4:+74372957 | None:intergenic |
AAACCAGAGATGGGAACAAA+TGG | 0.449170 | 1.4:+74373352 | None:intergenic |
ACTTCAGTTGTCAGTCCAGT+AGG | 0.456008 | 1.4:+74373109 | None:intergenic |
CTTCAGGATGTCTACAAGAT+TGG | 0.458119 | 1.4:-74373205 | MS.gene34006:CDS |
AGTCTCAACCACCATGGGCT+TGG | 0.462350 | 1.4:+74372733 | None:intergenic |
ACCAAATCAATGAGCCTAAG+AGG | 0.463105 | 1.4:-74373255 | MS.gene34006:CDS |
TGGGTCATCCTTGGAGTTTG+AGG | 0.465051 | 1.4:+74372976 | None:intergenic |
CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 1.4:+74372736 | None:intergenic |
TAGGCTCATTGATTTGGTCA+AGG | 0.472707 | 1.4:+74373260 | None:intergenic |
GGCTTGTCTGAAGGCCTCTT+AGG | 0.473139 | 1.4:+74373241 | None:intergenic |
TAGCCATTTCCAATCTGGCC+AGG | 0.474048 | 1.4:+74372905 | None:intergenic |
AGGCTCATTGATTTGGTCAA+GGG | 0.475242 | 1.4:+74373261 | None:intergenic |
TGCACTGTCATTGATGCCCC+TGG | 0.477178 | 1.4:-74373775 | MS.gene34006:CDS |
TTAATGAAATCCCTGTGTCC+AGG | 0.479234 | 1.4:+74373757 | None:intergenic |
TCACCATTGACATTGCTCTC+TGG | 0.481623 | 1.4:-74373822 | MS.gene34006:CDS |
AGCTTGTTACTAAGATTGAT+AGG | 0.481965 | 1.4:-74372832 | MS.gene34006:CDS |
ACAGTCAGCTTGGGATGTTC+CGG | 0.483896 | 1.4:+74373723 | None:intergenic |
TACAAACCTTGACTGGTACA+AGG | 0.490199 | 1.4:-74373302 | MS.gene34006:CDS |
TCATCCTATTTGAAGAAGGT+TGG | 0.491235 | 1.4:-74373394 | MS.gene34006:CDS |
GATTGATAGGCGTTCTGGTA+AGG | 0.495592 | 1.4:-74372819 | MS.gene34006:CDS |
ATCTCCCTCAAAACCAGAGA+TGG | 0.496573 | 1.4:+74373342 | None:intergenic |
TGAGAACGGCACAGTCAGCT+TGG | 0.498317 | 1.4:+74373713 | None:intergenic |
CTGACCATCCTTAGAAATAC+CGG | 0.501461 | 1.4:+74373660 | None:intergenic |
AGTTTCATCCTATTTGAAGA+AGG | 0.501588 | 1.4:-74373398 | MS.gene34006:CDS |
ATCATTGATTCCACTACTGG+TGG | 0.502099 | 1.4:-74373691 | MS.gene34006:CDS |
GAGAACGGCACAGTCAGCTT+GGG | 0.505334 | 1.4:+74373714 | None:intergenic |
CTTCAGTTGTCAGTCCAGTA+GGG | 0.506099 | 1.4:+74373110 | None:intergenic |
AGTAAAGCTCGCAGCCTCCT+TGG | 0.506205 | 1.4:+74372952 | None:intergenic |
AATTTCATCATATCTACCCT+TGG | 0.508007 | 1.4:+74373429 | None:intergenic |
AATGACAGTGCAGTAGTACT+TGG | 0.509426 | 1.4:+74373786 | None:intergenic |
CATCAAGGCTGTGGAGAAGA+AGG | 0.510945 | 1.4:-74372642 | MS.gene34006:CDS |
AGGAATTGGAACTGTGCCTG+TGG | 0.517140 | 1.4:-74373182 | MS.gene34006:CDS |
GGTCACCTTAAGTCCTCCAC+TGG | 0.520286 | 1.4:+74372616 | None:intergenic |
CAGGATGTCTACAAGATTGG+AGG | 0.523217 | 1.4:-74373202 | MS.gene34006:CDS |
TAATGAAATCCCTGTGTCCA+GGG | 0.528272 | 1.4:+74373758 | None:intergenic |
GAGCCCAAATTCTTGAAGAA+TGG | 0.528480 | 1.4:-74372785 | MS.gene34006:CDS |
TCCCACATTGTCACCAGGAA+GGG | 0.528721 | 1.4:+74373048 | None:intergenic |
CATTGATGCCCCTGGACACA+GGG | 0.535845 | 1.4:-74373767 | MS.gene34006:CDS |
GGAATTGGAACTGTGCCTGT+GGG | 0.536194 | 1.4:-74373181 | MS.gene34006:CDS |
TCATTGATGCCCCTGGACAC+AGG | 0.539611 | 1.4:-74373768 | MS.gene34006:CDS |
CTTCCAGAGAGCAATGTCAA+TGG | 0.541189 | 1.4:+74373819 | None:intergenic |
CATATCAACATTGTGGTCAT+CGG | 0.541947 | 1.4:-74374015 | MS.gene34006:CDS |
AGTCGAAGGGGCTTGTCTGA+AGG | 0.542120 | 1.4:+74373232 | None:intergenic |
CACTTGATCTACAAGCTTGG+AGG | 0.545798 | 1.4:-74373958 | MS.gene34006:CDS |
GGCTTCAAAACCACCAGTAG+TGG | 0.551737 | 1.4:+74373681 | None:intergenic |
TGTGGCTGTTGGCGTCATCA+AGG | 0.552638 | 1.4:-74372657 | MS.gene34006:CDS |
GGTCACTTGATCTACAAGCT+TGG | 0.555547 | 1.4:-74373961 | MS.gene34006:CDS |
CCAGTCTCGACACGCCCCAC+AGG | 0.557031 | 1.4:+74373166 | None:intergenic |
TCAAGGGCCTCAAGAAGGGT+TGG | 0.557590 | 1.4:+74373277 | None:intergenic |
TCAACCACCATGGGCTTGGT+GGG | 0.557624 | 1.4:+74372737 | None:intergenic |
TTGGTCAAGGGCCTCAAGAA+GGG | 0.558003 | 1.4:+74373273 | None:intergenic |
TTGGACCCTTGTACCAGTCA+AGG | 0.558366 | 1.4:+74373296 | None:intergenic |
AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 1.4:+74373635 | None:intergenic |
CTCAAGGCTGAACGTGAAAG+AGG | 0.559327 | 1.4:-74373847 | MS.gene34006:CDS |
TTTGGTCAAGGGCCTCAAGA+AGG | 0.560467 | 1.4:+74373272 | None:intergenic |
TTCTTGAAGAATGGTGATGC+TGG | 0.561159 | 1.4:-74372776 | MS.gene34006:CDS |
TCTGGGAAATCAACCACCAC+TGG | 0.562550 | 1.4:-74373982 | MS.gene34006:CDS |
GAAGCCGGTATTTCTAAGGA+TGG | 0.564413 | 1.4:-74373664 | MS.gene34006:CDS |
ACAAACCTTGACTGGTACAA+GGG | 0.567625 | 1.4:-74373301 | MS.gene34006:CDS |
TCATCGGCCATGTTGACTCT+GGG | 0.571507 | 1.4:-74373999 | MS.gene34006:CDS |
TTCATTAAGAACATGATCAC+CGG | 0.572337 | 1.4:-74373742 | MS.gene34006:CDS |
AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 1.4:+74373636 | None:intergenic |
AGCGCTCTACAAACCTTGAC+TGG | 0.575793 | 1.4:-74373309 | MS.gene34006:CDS |
GAGAAAGTCTCAACCACCAT+GGG | 0.575954 | 1.4:+74372728 | None:intergenic |
ATCCTGAAGTGGTAGTCGAA+GGG | 0.576252 | 1.4:+74373219 | None:intergenic |
CTTGAGCTTGTCAAGGACCC+AGG | 0.577041 | 1.4:+74373864 | None:intergenic |
TATCTACCCTTGGAGTACTT+GGG | 0.580849 | 1.4:+74373439 | None:intergenic |
TTGACAAGCGTGTCATTGAG+AGG | 0.584549 | 1.4:-74373933 | MS.gene34006:CDS |
ATCCCACATTGTCACCAGGA+AGG | 0.585536 | 1.4:+74373047 | None:intergenic |
GAGACTGGTGTCATAAAACC+TGG | 0.585699 | 1.4:-74373151 | MS.gene34006:CDS |
CTGGGTCCTTGACAAGCTCA+AGG | 0.585742 | 1.4:-74373863 | MS.gene34006:CDS |
GGCCCTTCCTGGTGACAATG+TGG | 0.586985 | 1.4:-74373050 | MS.gene34006:CDS |
CTGTTAAGGATCTCAAGCGT+GGG | 0.589274 | 1.4:-74373006 | MS.gene34006:CDS |
CATCCTGAAGTGGTAGTCGA+AGG | 0.591035 | 1.4:+74373218 | None:intergenic |
TTCTCTGAATATCCTCCACT+CGG | 0.591172 | 1.4:-74372710 | MS.gene34006:CDS |
GCCCTTCCTGGTGACAATGT+GGG | 0.592402 | 1.4:-74373049 | MS.gene34006:CDS |
TTGATTTCCCAGAGTCAACA+TGG | 0.596206 | 1.4:+74373992 | None:intergenic |
TAGATATGATGAAATTGTGA+AGG | 0.599770 | 1.4:-74373422 | MS.gene34006:CDS |
GCATGTCTCTAACAGCAAAA+CGG | 0.600985 | 1.4:+74372687 | None:intergenic |
CTCCAAGGATGACCCAGCCA+AGG | 0.602045 | 1.4:-74372969 | MS.gene34006:CDS |
GCGTTCATTCAAGTATGCCT+GGG | 0.605879 | 1.4:-74373881 | MS.gene34006:CDS |
GTCACCTTAAGTCCTCCACT+GGG | 0.606003 | 1.4:+74372617 | None:intergenic |
TCTCCCTCAAAACCAGAGAT+GGG | 0.607478 | 1.4:+74373343 | None:intergenic |
GATGATTCCCACCAAGCCCA+TGG | 0.611182 | 1.4:-74372744 | MS.gene34006:CDS |
TACTACACCCAAGTACTCCA+AGG | 0.613862 | 1.4:-74373446 | MS.gene34006:CDS |
AAAGGTTCATATCAACATTG+TGG | 0.619488 | 1.4:-74374022 | MS.gene34006:CDS |
CAAGGGTCCAACCCTTCTTG+AGG | 0.620566 | 1.4:-74373284 | MS.gene34006:CDS |
TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 1.4:+74373620 | None:intergenic |
ATCTTGTAGACATCCTGAAG+TGG | 0.621388 | 1.4:+74373208 | None:intergenic |
GCTGTTAAGGATCTCAAGCG+TGG | 0.622485 | 1.4:-74373007 | MS.gene34006:CDS |
TGTTGGCGTCATCAAGGCTG+TGG | 0.622557 | 1.4:-74372651 | MS.gene34006:CDS |
TTCAGTTGTCAGTCCAGTAG+GGG | 0.622733 | 1.4:+74373111 | None:intergenic |
AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 1.4:+74372906 | None:intergenic |
GACAACTGAAGTCAAGTCTG+TGG | 0.624055 | 1.4:-74373098 | MS.gene34006:CDS |
ACAGCAAAACGGCCGAGTGG+AGG | 0.624787 | 1.4:+74372698 | None:intergenic |
TGGTGTCATAAAACCTGGAA+TGG | 0.625384 | 1.4:-74373146 | MS.gene34006:CDS |
TCCTGAAGTGGTAGTCGAAG+GGG | 0.627928 | 1.4:+74373220 | None:intergenic |
AGGTGTGGCAGTCAAGAACA+GGG | 0.628146 | 1.4:+74372879 | None:intergenic |
GTTCAGCCTTGAGCTTGTCA+AGG | 0.628494 | 1.4:+74373857 | None:intergenic |
GCATCATGAAGCTCTAACAG+AGG | 0.633418 | 1.4:-74373071 | MS.gene34006:CDS |
GTATGTTGCCTCAAACTCCA+AGG | 0.633897 | 1.4:-74372984 | MS.gene34006:CDS |
AGAGAAAGTCTCAACCACCA+TGG | 0.641605 | 1.4:+74372727 | None:intergenic |
ATGCGTCAAACTGTGGCTGT+TGG | 0.643159 | 1.4:-74372668 | MS.gene34006:CDS |
TTCTGGTAAGGAGATTGAGA+AGG | 0.643722 | 1.4:-74372807 | MS.gene34006:CDS |
GAATTGGAACTGTGCCTGTG+GGG | 0.644316 | 1.4:-74373180 | MS.gene34006:CDS |
AGTGGAATCAATGATGAGAA+CGG | 0.644693 | 1.4:+74373699 | None:intergenic |
AAACTTGACAGCAATGTGAG+AGG | 0.653594 | 1.4:+74372859 | None:intergenic |
AATGAAATCCCTGTGTCCAG+GGG | 0.656838 | 1.4:+74373759 | None:intergenic |
TTAAATCCCACATTGTCACC+AGG | 0.657091 | 1.4:+74373043 | None:intergenic |
AATGATCTGCTGTTGCAACA+AGG | 0.659392 | 1.4:-74373593 | MS.gene34006:intron |
CAAGGATGACCCAGCCAAGG+AGG | 0.659665 | 1.4:-74372966 | MS.gene34006:CDS |
GAGAAGAAGGATCCCAGTGG+AGG | 0.667988 | 1.4:-74372629 | MS.gene34006:CDS |
ACTACACCCAAGTACTCCAA+GGG | 0.678033 | 1.4:-74373445 | MS.gene34006:CDS |
CTTGTAGATCAAGTGACCAG+TGG | 0.682705 | 1.4:+74373966 | None:intergenic |
TAGAGACATGCGTCAAACTG+TGG | 0.690315 | 1.4:-74372675 | MS.gene34006:CDS |
CTAACAGCAAAACGGCCGAG+TGG | 0.692072 | 1.4:+74372695 | None:intergenic |
GTAGATCAAGTGACCAGTGG+TGG | 0.699002 | 1.4:+74373969 | None:intergenic |
GTGATCATAATGAATCACCC+TGG | 0.699056 | 1.4:-74372923 | MS.gene34006:CDS |
GATTCCCACCAAGCCCATGG+TGG | 0.723849 | 1.4:-74372741 | MS.gene34006:CDS |
GGTGTGGCAGTCAAGAACAG+GGG | 0.727394 | 1.4:+74372880 | None:intergenic |
TGACAGCAATGTGAGAGGTG+TGG | 0.729691 | 1.4:+74372864 | None:intergenic |
GTGGAGAAGAAGGATCCCAG+TGG | 0.734762 | 1.4:-74372632 | MS.gene34006:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATCAAATATACAACTTCAA+GGG | + | chr1.4:74373075-74373094 | None:intergenic | 20.0% |
!! | TAATCAAATATACAACTTCA+AGG | + | chr1.4:74373076-74373095 | None:intergenic | 20.0% |
! | ATCAAATATACAACTTCAAG+GGG | + | chr1.4:74373074-74373093 | None:intergenic | 25.0% |
! | TAGATATGATGAAATTGTGA+AGG | - | chr1.4:74373203-74373222 | MS.gene34006:CDS | 25.0% |
AAAGGTTCATATCAACATTG+TGG | - | chr1.4:74372603-74372622 | MS.gene34006:CDS | 30.0% | |
AATTTCATCATATCTACCCT+TGG | + | chr1.4:74373199-74373218 | None:intergenic | 30.0% | |
AGTTTCATCCTATTTGAAGA+AGG | - | chr1.4:74373227-74373246 | MS.gene34006:CDS | 30.0% | |
ATCACCATTCTTCAAGAATT+TGG | + | chr1.4:74373847-74373866 | None:intergenic | 30.0% | |
TCACCATTCTTCAAGAATTT+GGG | + | chr1.4:74373846-74373865 | None:intergenic | 30.0% | |
TTCATTAAGAACATGATCAC+CGG | - | chr1.4:74372883-74372902 | MS.gene34006:CDS | 30.0% | |
! | GAACAAATGGAATTTTGTCT+GGG | + | chr1.4:74373263-74373282 | None:intergenic | 30.0% |
!! | AGCTTGTTACTAAGATTGAT+AGG | - | chr1.4:74373793-74373812 | MS.gene34006:CDS | 30.0% |
AGTGGAATCAATGATGAGAA+CGG | + | chr1.4:74372929-74372948 | None:intergenic | 35.0% | |
ATAGCCAACCTTCTTCAAAT+AGG | + | chr1.4:74373238-74373257 | None:intergenic | 35.0% | |
ATCCATCTGTTCAAGATAGA+TGG | + | chr1.4:74373157-74373176 | None:intergenic | 35.0% | |
CATATCAACATTGTGGTCAT+CGG | - | chr1.4:74372610-74372629 | MS.gene34006:CDS | 35.0% | |
TCATCCTATTTGAAGAAGGT+TGG | - | chr1.4:74373231-74373250 | MS.gene34006:CDS | 35.0% | |
! | GGAACAAATGGAATTTTGTC+TGG | + | chr1.4:74373264-74373283 | None:intergenic | 35.0% |
! | TGTCAAGAATGTTGCTGTTA+AGG | - | chr1.4:74373605-74373624 | MS.gene34006:CDS | 35.0% |
!!! | TTTTGAAGCCGGTATTTCTA+AGG | - | chr1.4:74372957-74372976 | MS.gene34006:CDS | 35.0% |
AAACCAGAGATGGGAACAAA+TGG | + | chr1.4:74373276-74373295 | None:intergenic | 40.0% | |
AAACTTGACAGCAATGTGAG+AGG | + | chr1.4:74373769-74373788 | None:intergenic | 40.0% | |
AATGACAGTGCAGTAGTACT+TGG | + | chr1.4:74372842-74372861 | None:intergenic | 40.0% | |
AATGATCTGCTGTTGCAACA+AGG | - | chr1.4:74373032-74373051 | MS.gene34006:CDS | 40.0% | |
ACAAACCTTGACTGGTACAA+GGG | - | chr1.4:74373324-74373343 | MS.gene34006:CDS | 40.0% | |
ACCAAATCAATGAGCCTAAG+AGG | - | chr1.4:74373370-74373389 | MS.gene34006:CDS | 40.0% | |
ACTAAGATTGATAGGCGTTC+TGG | - | chr1.4:74373801-74373820 | MS.gene34006:CDS | 40.0% | |
ATCTTGTAGACATCCTGAAG+TGG | + | chr1.4:74373420-74373439 | None:intergenic | 40.0% | |
ATTCCATTTGTTCCCATCTC+TGG | - | chr1.4:74373270-74373289 | MS.gene34006:CDS | 40.0% | |
CTGACCATCCTTAGAAATAC+CGG | + | chr1.4:74372968-74372987 | None:intergenic | 40.0% | |
CTTCAGGATGTCTACAAGAT+TGG | - | chr1.4:74373420-74373439 | MS.gene34006:CDS | 40.0% | |
GAGCCCAAATTCTTGAAGAA+TGG | - | chr1.4:74373840-74373859 | MS.gene34006:CDS | 40.0% | |
GCATGTCTCTAACAGCAAAA+CGG | + | chr1.4:74373941-74373960 | None:intergenic | 40.0% | |
GTCTACAAGATTGGAGGAAT+TGG | - | chr1.4:74373429-74373448 | MS.gene34006:CDS | 40.0% | |
GTGATCATAATGAATCACCC+TGG | - | chr1.4:74373702-74373721 | MS.gene34006:CDS | 40.0% | |
TAATGAAATCCCTGTGTCCA+GGG | + | chr1.4:74372870-74372889 | None:intergenic | 40.0% | |
TACAAACCTTGACTGGTACA+AGG | - | chr1.4:74373323-74373342 | MS.gene34006:CDS | 40.0% | |
TGCCATCTATCTTGAACAGA+TGG | - | chr1.4:74373152-74373171 | MS.gene34006:CDS | 40.0% | |
TTAAATCCCACATTGTCACC+AGG | + | chr1.4:74373585-74373604 | None:intergenic | 40.0% | |
TTAATGAAATCCCTGTGTCC+AGG | + | chr1.4:74372871-74372890 | None:intergenic | 40.0% | |
TTCTCTGAATATCCTCCACT+CGG | - | chr1.4:74373915-74373934 | MS.gene34006:CDS | 40.0% | |
TTCTGGTAAGGAGATTGAGA+AGG | - | chr1.4:74373818-74373837 | MS.gene34006:CDS | 40.0% | |
TTGATTTCCCAGAGTCAACA+TGG | + | chr1.4:74372636-74372655 | None:intergenic | 40.0% | |
! | ATATCTACCCTTGGAGTACT+TGG | + | chr1.4:74373190-74373209 | None:intergenic | 40.0% |
! | CTTCTTCTTCAATGCTGACT+TGG | + | chr1.4:74374033-74374052 | None:intergenic | 40.0% |
! | TATCTACCCTTGGAGTACTT+GGG | + | chr1.4:74373189-74373208 | None:intergenic | 40.0% |
! | TTCTTGAAGAATGGTGATGC+TGG | - | chr1.4:74373849-74373868 | MS.gene34006:CDS | 40.0% |
!! | AGGCTCATTGATTTGGTCAA+GGG | + | chr1.4:74373367-74373386 | None:intergenic | 40.0% |
!! | ATCATTGATTCCACTACTGG+TGG | - | chr1.4:74372934-74372953 | MS.gene34006:CDS | 40.0% |
!! | CTCATCATTGATTCCACTAC+TGG | - | chr1.4:74372931-74372950 | MS.gene34006:CDS | 40.0% |
!! | TAGGCTCATTGATTTGGTCA+AGG | + | chr1.4:74373368-74373387 | None:intergenic | 40.0% |
!! | TGGTGTCATAAAACCTGGAA+TGG | - | chr1.4:74373479-74373498 | MS.gene34006:intron | 40.0% |
AATGAAATCCCTGTGTCCAG+GGG | + | chr1.4:74372869-74372888 | None:intergenic | 45.0% | |
ACTACACCCAAGTACTCCAA+GGG | - | chr1.4:74373180-74373199 | MS.gene34006:CDS | 45.0% | |
ACTTCAGTTGTCAGTCCAGT+AGG | + | chr1.4:74373519-74373538 | None:intergenic | 45.0% | |
AGAGAAAGTCTCAACCACCA+TGG | + | chr1.4:74373901-74373920 | None:intergenic | 45.0% | |
AGCGTTCATTCAAGTATGCC+TGG | - | chr1.4:74372743-74372762 | MS.gene34006:CDS | 45.0% | |
ATCCTGAAGTGGTAGTCGAA+GGG | + | chr1.4:74373409-74373428 | None:intergenic | 45.0% | |
ATCTCCCTCAAAACCAGAGA+TGG | + | chr1.4:74373286-74373305 | None:intergenic | 45.0% | |
CACTTGATCTACAAGCTTGG+AGG | - | chr1.4:74372667-74372686 | MS.gene34006:CDS | 45.0% | |
CAGGATGTCTACAAGATTGG+AGG | - | chr1.4:74373423-74373442 | MS.gene34006:CDS | 45.0% | |
CTGTTAAGGATCTCAAGCGT+GGG | - | chr1.4:74373619-74373638 | MS.gene34006:CDS | 45.0% | |
CTTCAGTTGTCAGTCCAGTA+GGG | + | chr1.4:74373518-74373537 | None:intergenic | 45.0% | |
CTTCCAGAGAGCAATGTCAA+TGG | + | chr1.4:74372809-74372828 | None:intergenic | 45.0% | |
CTTGTAGATCAAGTGACCAG+TGG | + | chr1.4:74372662-74372681 | None:intergenic | 45.0% | |
GACAACTGAAGTCAAGTCTG+TGG | - | chr1.4:74373527-74373546 | MS.gene34006:intron | 45.0% | |
GAGAAAGTCTCAACCACCAT+GGG | + | chr1.4:74373900-74373919 | None:intergenic | 45.0% | |
GATTGATAGGCGTTCTGGTA+AGG | - | chr1.4:74373806-74373825 | MS.gene34006:CDS | 45.0% | |
GCAAAAGTGACAACCATTCC+AGG | + | chr1.4:74373495-74373514 | None:intergenic | 45.0% | |
GCGTTCATTCAAGTATGCCT+GGG | - | chr1.4:74372744-74372763 | MS.gene34006:CDS | 45.0% | |
GGTCACTTGATCTACAAGCT+TGG | - | chr1.4:74372664-74372683 | MS.gene34006:CDS | 45.0% | |
GTATGTTGCCTCAAACTCCA+AGG | - | chr1.4:74373641-74373660 | MS.gene34006:CDS | 45.0% | |
TACTACACCCAAGTACTCCA+AGG | - | chr1.4:74373179-74373198 | MS.gene34006:CDS | 45.0% | |
TAGAGACATGCGTCAAACTG+TGG | - | chr1.4:74373950-74373969 | MS.gene34006:CDS | 45.0% | |
TCACACCAAGAGTGAAAGCA+AGG | + | chr1.4:74373008-74373027 | None:intergenic | 45.0% | |
TCACCATTGACATTGCTCTC+TGG | - | chr1.4:74372803-74372822 | MS.gene34006:CDS | 45.0% | |
TCTCCCTCAAAACCAGAGAT+GGG | + | chr1.4:74373285-74373304 | None:intergenic | 45.0% | |
TTCAGTTGTCAGTCCAGTAG+GGG | + | chr1.4:74373517-74373536 | None:intergenic | 45.0% | |
! | AAGCAAGGAGAGCATGTTCA+CGG | + | chr1.4:74372993-74373012 | None:intergenic | 45.0% |
! | GAAGCCGGTATTTCTAAGGA+TGG | - | chr1.4:74372961-74372980 | MS.gene34006:CDS | 45.0% |
! | GCATCATGAAGCTCTAACAG+AGG | - | chr1.4:74373554-74373573 | MS.gene34006:intron | 45.0% |
! | GCCTCTTAGGCTCATTGATT+TGG | + | chr1.4:74373374-74373393 | None:intergenic | 45.0% |
! | TTGACAAGCGTGTCATTGAG+AGG | - | chr1.4:74372692-74372711 | MS.gene34006:CDS | 45.0% |
!! | GAGACTGGTGTCATAAAACC+TGG | - | chr1.4:74373474-74373493 | MS.gene34006:intron | 45.0% |
!!! | ACTACTGGTGGTTTTGAAGC+CGG | - | chr1.4:74372946-74372965 | MS.gene34006:CDS | 45.0% |
!!! | GTTCCCATCTCTGGTTTTGA+GGG | - | chr1.4:74373279-74373298 | MS.gene34006:CDS | 45.0% |
!!! | TGTTCCCATCTCTGGTTTTG+AGG | - | chr1.4:74373278-74373297 | MS.gene34006:CDS | 45.0% |
ACAGTCAGCTTGGGATGTTC+CGG | + | chr1.4:74372905-74372924 | None:intergenic | 50.0% | |
AGCCATTTCCAATCTGGCCA+GGG | + | chr1.4:74373722-74373741 | None:intergenic | 50.0% | |
AGCGCTCTACAAACCTTGAC+TGG | - | chr1.4:74373316-74373335 | MS.gene34006:CDS | 50.0% | |
AGGAATTGGAACTGTGCCTG+TGG | - | chr1.4:74373443-74373462 | MS.gene34006:CDS | 50.0% | |
AGGTGTGGCAGTCAAGAACA+GGG | + | chr1.4:74373749-74373768 | None:intergenic | 50.0% | |
ATCCCACATTGTCACCAGGA+AGG | + | chr1.4:74373581-74373600 | None:intergenic | 50.0% | |
ATGAATCACCCTGGCCAGAT+TGG | - | chr1.4:74373711-74373730 | MS.gene34006:CDS | 50.0% | |
ATGCGTCAAACTGTGGCTGT+TGG | - | chr1.4:74373957-74373976 | MS.gene34006:CDS | 50.0% | |
CATCAAGGCTGTGGAGAAGA+AGG | - | chr1.4:74373983-74374002 | MS.gene34006:CDS | 50.0% | |
CATCCTGAAGTGGTAGTCGA+AGG | + | chr1.4:74373410-74373429 | None:intergenic | 50.0% | |
CTCAAGGCTGAACGTGAAAG+AGG | - | chr1.4:74372778-74372797 | MS.gene34006:CDS | 50.0% | |
GAATTGGAACTGTGCCTGTG+GGG | - | chr1.4:74373445-74373464 | MS.gene34006:CDS | 50.0% | |
GCTCTCCTTGCTTTCACTCT+TGG | - | chr1.4:74373000-74373019 | MS.gene34006:CDS | 50.0% | |
GCTGTTAAGGATCTCAAGCG+TGG | - | chr1.4:74373618-74373637 | MS.gene34006:CDS | 50.0% | |
GGAATTGGAACTGTGCCTGT+GGG | - | chr1.4:74373444-74373463 | MS.gene34006:CDS | 50.0% | |
GGCTTCAAAACCACCAGTAG+TGG | + | chr1.4:74372947-74372966 | None:intergenic | 50.0% | |
GGGCATAGCCATTTCCAATC+TGG | + | chr1.4:74373728-74373747 | None:intergenic | 50.0% | |
GTAGATCAAGTGACCAGTGG+TGG | + | chr1.4:74372659-74372678 | None:intergenic | 50.0% | |
GTCACCTTAAGTCCTCCACT+GGG | + | chr1.4:74374011-74374030 | None:intergenic | 50.0% | |
GTTCAGCCTTGAGCTTGTCA+AGG | + | chr1.4:74372771-74372790 | None:intergenic | 50.0% | |
TAGCCATTTCCAATCTGGCC+AGG | + | chr1.4:74373723-74373742 | None:intergenic | 50.0% | |
TCCCACATTGTCACCAGGAA+GGG | + | chr1.4:74373580-74373599 | None:intergenic | 50.0% | |
TCCTGAAGTGGTAGTCGAAG+GGG | + | chr1.4:74373408-74373427 | None:intergenic | 50.0% | |
TCTGGGAAATCAACCACCAC+TGG | - | chr1.4:74372643-74372662 | MS.gene34006:CDS | 50.0% | |
TGACAGCAATGTGAGAGGTG+TGG | + | chr1.4:74373764-74373783 | None:intergenic | 50.0% | |
TGGGTCATCCTTGGAGTTTG+AGG | + | chr1.4:74373652-74373671 | None:intergenic | 50.0% | |
TTGGACCCTTGTACCAGTCA+AGG | + | chr1.4:74373332-74373351 | None:intergenic | 50.0% | |
TTGGTCAAGGGCCTCAAGAA+GGG | + | chr1.4:74373355-74373374 | None:intergenic | 50.0% | |
TTTGGTCAAGGGCCTCAAGA+AGG | + | chr1.4:74373356-74373375 | None:intergenic | 50.0% | |
! | AGCAAGGAGAGCATGTTCAC+GGG | + | chr1.4:74372992-74373011 | None:intergenic | 50.0% |
!! | TCATCGGCCATGTTGACTCT+GGG | - | chr1.4:74372626-74372645 | MS.gene34006:CDS | 50.0% |
!!! | GTTGTCACTTTTGCCCCTAC+TGG | - | chr1.4:74373501-74373520 | MS.gene34006:intron | 50.0% |
AGTAAAGCTCGCAGCCTCCT+TGG | + | chr1.4:74373676-74373695 | None:intergenic | 55.0% | |
AGTCGAAGGGGCTTGTCTGA+AGG | + | chr1.4:74373396-74373415 | None:intergenic | 55.0% | |
AGTCTCAACCACCATGGGCT+TGG | + | chr1.4:74373895-74373914 | None:intergenic | 55.0% | |
CAAGGGTCCAACCCTTCTTG+AGG | - | chr1.4:74373341-74373360 | MS.gene34006:CDS | 55.0% | |
CACCCTGGCCAGATTGGAAA+TGG | - | chr1.4:74373717-74373736 | MS.gene34006:CDS | 55.0% | |
CATTGATGCCCCTGGACACA+GGG | - | chr1.4:74372858-74372877 | MS.gene34006:CDS | 55.0% | |
CTAACAGCAAAACGGCCGAG+TGG | + | chr1.4:74373933-74373952 | None:intergenic | 55.0% | |
CTGGGTCCTTGACAAGCTCA+AGG | - | chr1.4:74372762-74372781 | MS.gene34006:CDS | 55.0% | |
CTTGAGCTTGTCAAGGACCC+AGG | + | chr1.4:74372764-74372783 | None:intergenic | 55.0% | |
GAGAACGGCACAGTCAGCTT+GGG | + | chr1.4:74372914-74372933 | None:intergenic | 55.0% | |
GAGAAGAAGGATCCCAGTGG+AGG | - | chr1.4:74373996-74374015 | MS.gene34006:CDS | 55.0% | |
GAGGTGTGGCAGTCAAGAAC+AGG | + | chr1.4:74373750-74373769 | None:intergenic | 55.0% | |
GATGATTCCCACCAAGCCCA+TGG | - | chr1.4:74373881-74373900 | MS.gene34006:CDS | 55.0% | |
GCCCTTCCTGGTGACAATGT+GGG | - | chr1.4:74373576-74373595 | MS.gene34006:intron | 55.0% | |
GGATCCCAGTGGAGGACTTA+AGG | - | chr1.4:74374004-74374023 | MS.gene34006:CDS | 55.0% | |
GGCTTGTCTGAAGGCCTCTT+AGG | + | chr1.4:74373387-74373406 | None:intergenic | 55.0% | |
GGTCACCTTAAGTCCTCCAC+TGG | + | chr1.4:74374012-74374031 | None:intergenic | 55.0% | |
GGTGTGGCAGTCAAGAACAG+GGG | + | chr1.4:74373748-74373767 | None:intergenic | 55.0% | |
GTGGAGAAGAAGGATCCCAG+TGG | - | chr1.4:74373993-74374012 | MS.gene34006:CDS | 55.0% | |
TCAAGGGCCTCAAGAAGGGT+TGG | + | chr1.4:74373351-74373370 | None:intergenic | 55.0% | |
TCATTGATGCCCCTGGACAC+AGG | - | chr1.4:74372857-74372876 | MS.gene34006:CDS | 55.0% | |
TGAGAACGGCACAGTCAGCT+TGG | + | chr1.4:74372915-74372934 | None:intergenic | 55.0% | |
TGCACTGTCATTGATGCCCC+TGG | - | chr1.4:74372850-74372869 | MS.gene34006:CDS | 55.0% | |
TGTGGCTGTTGGCGTCATCA+AGG | - | chr1.4:74373968-74373987 | MS.gene34006:CDS | 55.0% | |
TGTTGGCGTCATCAAGGCTG+TGG | - | chr1.4:74373974-74373993 | MS.gene34006:CDS | 55.0% | |
! | TCAACCACCATGGGCTTGGT+GGG | + | chr1.4:74373891-74373910 | None:intergenic | 55.0% |
!! | GTCATCGGCCATGTTGACTC+TGG | - | chr1.4:74372625-74372644 | MS.gene34006:CDS | 55.0% |
ACAGCAAAACGGCCGAGTGG+AGG | + | chr1.4:74373930-74373949 | None:intergenic | 60.0% | |
CAAGGATGACCCAGCCAAGG+AGG | - | chr1.4:74373659-74373678 | MS.gene34006:CDS | 60.0% | |
CTCAACCACCATGGGCTTGG+TGG | + | chr1.4:74373892-74373911 | None:intergenic | 60.0% | |
CTCCAAGGATGACCCAGCCA+AGG | - | chr1.4:74373656-74373675 | MS.gene34006:CDS | 60.0% | |
CTCCTTGGCTGGGTCATCCT+TGG | + | chr1.4:74373661-74373680 | None:intergenic | 60.0% | |
GATTCCCACCAAGCCCATGG+TGG | - | chr1.4:74373884-74373903 | MS.gene34006:CDS | 60.0% | |
GCCCCTTCGACTACCACTTC+AGG | - | chr1.4:74373404-74373423 | MS.gene34006:CDS | 60.0% | |
GCTCTAACAGAGGCCCTTCC+TGG | - | chr1.4:74373564-74373583 | MS.gene34006:intron | 60.0% | |
GGCCCTTCCTGGTGACAATG+TGG | - | chr1.4:74373575-74373594 | MS.gene34006:intron | 60.0% | |
AAGCTCGCAGCCTCCTTGGC+TGG | + | chr1.4:74373672-74373691 | None:intergenic | 65.0% | |
AGCTCGCAGCCTCCTTGGCT+GGG | + | chr1.4:74373671-74373690 | None:intergenic | 65.0% | |
CCAGTCTCGACACGCCCCAC+AGG | + | chr1.4:74373462-74373481 | None:intergenic | 70.0% | |
CCTGTGGGGCGTGTCGAGAC+TGG | - | chr1.4:74373459-74373478 | MS.gene34006:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 74372592 | 74374055 | 74372592 | ID=MS.gene34006 |
chr1.4 | mRNA | 74372592 | 74374055 | 74372592 | ID=MS.gene34006.t1;Parent=MS.gene34006 |
chr1.4 | exon | 74373594 | 74374055 | 74373594 | ID=MS.gene34006.t1.exon1;Parent=MS.gene34006.t1 |
chr1.4 | CDS | 74373594 | 74374055 | 74373594 | ID=cds.MS.gene34006.t1;Parent=MS.gene34006.t1 |
chr1.4 | exon | 74372592 | 74373476 | 74372592 | ID=MS.gene34006.t1.exon2;Parent=MS.gene34006.t1 |
chr1.4 | CDS | 74372592 | 74373476 | 74372592 | ID=cds.MS.gene34006.t1;Parent=MS.gene34006.t1 |
Gene Sequence |
Protein sequence |