Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54761.t1 | XP_003591959.2 | 99.6 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 1.70E-258 | 901.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54761.t1 | O64937 | 96.7 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 6.5e-254 | 877.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54761.t1 | G7I9L3 | 99.6 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 1.3e-258 | 901.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54761.t1 | MTR_1g495705 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 916 |
| MS.gene54761.t1 | MTR_1g095650 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 916 |
| MS.gene54761.t1 | MTR_1g095703 | 99.330 | 448 | 3 | 0 | 1 | 448 | 1 | 448 | 0.0 | 915 |
| MS.gene54761.t1 | MTR_6g021800 | 96.652 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 0.0 | 896 |
| MS.gene54761.t1 | MTR_6g021805 | 96.652 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 0.0 | 896 |
| MS.gene54761.t1 | MTR_4g014810 | 96.205 | 448 | 16 | 1 | 1 | 448 | 1 | 447 | 0.0 | 890 |
| MS.gene54761.t1 | MTR_1g013680 | 95.565 | 451 | 17 | 1 | 1 | 448 | 1 | 451 | 0.0 | 879 |
| MS.gene54761.t1 | MTR_1g085410 | 81.674 | 442 | 81 | 0 | 1 | 442 | 1 | 442 | 0.0 | 746 |
| MS.gene54761.t1 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 736 |
| MS.gene54761.t1 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 734 |
| MS.gene54761.t1 | MTR_1g024175 | 79.263 | 434 | 90 | 0 | 1 | 434 | 1 | 434 | 0.0 | 728 |
| MS.gene54761.t1 | MTR_8g014590 | 79.733 | 449 | 89 | 1 | 1 | 447 | 1 | 449 | 0.0 | 723 |
| MS.gene54761.t1 | MTR_1g095650 | 99.424 | 347 | 2 | 0 | 102 | 448 | 1 | 347 | 0.0 | 708 |
| MS.gene54761.t1 | MTR_2g082730 | 72.644 | 435 | 102 | 2 | 1 | 433 | 1 | 420 | 0.0 | 645 |
| MS.gene54761.t1 | MTR_5g037350 | 67.660 | 470 | 115 | 1 | 3 | 435 | 13 | 482 | 0.0 | 634 |
| MS.gene54761.t1 | MTR_1g089520 | 71.395 | 430 | 105 | 3 | 4 | 432 | 5 | 417 | 0.0 | 627 |
| MS.gene54761.t1 | MTR_2g082665 | 67.586 | 435 | 98 | 2 | 1 | 433 | 1 | 394 | 0.0 | 587 |
| MS.gene54761.t1 | MTR_2g037420 | 65.820 | 433 | 105 | 3 | 1 | 431 | 1 | 392 | 0.0 | 563 |
| MS.gene54761.t1 | MTR_2g080210 | 63.839 | 448 | 119 | 5 | 1 | 445 | 1 | 408 | 0.0 | 551 |
| MS.gene54761.t1 | MTR_8g013910 | 63.920 | 449 | 127 | 5 | 1 | 433 | 1 | 430 | 0.0 | 551 |
| MS.gene54761.t1 | MTR_8g008740 | 78.462 | 325 | 69 | 1 | 1 | 324 | 1 | 325 | 0.0 | 539 |
| MS.gene54761.t1 | MTR_1g112460 | 66.443 | 298 | 59 | 4 | 155 | 447 | 1 | 262 | 2.52e-128 | 372 |
| MS.gene54761.t1 | MTR_1g495735 | 76.119 | 201 | 38 | 1 | 240 | 430 | 106 | 306 | 1.46e-100 | 303 |
| MS.gene54761.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 5.46e-17 | 81.6 |
| MS.gene54761.t1 | MTR_6g080420 | 37.963 | 432 | 254 | 6 | 5 | 428 | 89 | 514 | 6.09e-97 | 301 |
| MS.gene54761.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 49 | 476 | 7.36e-94 | 291 |
| MS.gene54761.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 43 | 470 | 9.95e-94 | 291 |
| MS.gene54761.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 70 | 497 | 1.86e-93 | 291 |
| MS.gene54761.t1 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 275 | 704 | 2.65e-91 | 291 |
| MS.gene54761.t1 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 348 | 777 | 2.21e-90 | 291 |
| MS.gene54761.t1 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 6.53e-90 | 274 |
| MS.gene54761.t1 | MTR_4g054970 | 57.025 | 242 | 75 | 4 | 193 | 431 | 50 | 265 | 6.41e-81 | 251 |
| MS.gene54761.t1 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 7.81e-13 | 68.9 |
| MS.gene54761.t1 | MTR_1g024165 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 1.45e-78 | 241 |
| MS.gene54761.t1 | MTR_8g014950 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 1.65e-47 | 159 |
| MS.gene54761.t1 | MTR_7g094460 | 30.365 | 438 | 245 | 14 | 3 | 429 | 59 | 447 | 1.59e-45 | 164 |
| MS.gene54761.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 7.51e-43 | 149 |
| MS.gene54761.t1 | MTR_2g021300 | 29.613 | 439 | 247 | 12 | 3 | 429 | 46 | 434 | 5.26e-42 | 154 |
| MS.gene54761.t1 | MTR_3g076660 | 29.955 | 444 | 250 | 15 | 3 | 429 | 88 | 487 | 1.61e-40 | 151 |
| MS.gene54761.t1 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 213 | 294 | 2 | 83 | 2.64e-28 | 110 |
| MS.gene54761.t1 | MTR_3g097250 | 26.471 | 272 | 143 | 9 | 9 | 272 | 85 | 307 | 1.38e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54761.t1 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene54761.t1 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene54761.t1 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene54761.t1 | AT1G07920 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene54761.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene54761.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene54761.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene54761.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene54761.t1 | AT1G07930 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene54761.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
| MS.gene54761.t1 | AT1G07930 | 88.034 | 117 | 13 | 1 | 331 | 447 | 254 | 369 | 1.10e-65 | 215 |
| MS.gene54761.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.39e-94 | 294 |
| MS.gene54761.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.39e-94 | 294 |
| MS.gene54761.t1 | AT1G18070 | 36.927 | 436 | 256 | 6 | 5 | 424 | 99 | 531 | 3.96e-91 | 286 |
| MS.gene54761.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 2.20e-90 | 288 |
| MS.gene54761.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 2.25e-90 | 288 |
| MS.gene54761.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 2.25e-90 | 288 |
| MS.gene54761.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 1.28e-89 | 288 |
| MS.gene54761.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 1.34e-89 | 288 |
| MS.gene54761.t1 | AT1G35550 | 78.641 | 103 | 22 | 0 | 335 | 437 | 1 | 103 | 1.58e-53 | 174 |
| MS.gene54761.t1 | AT4G02930 | 30.296 | 439 | 245 | 15 | 3 | 429 | 63 | 452 | 7.25e-44 | 160 |
| MS.gene54761.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 1.66e-43 | 159 |
| MS.gene54761.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 1.66e-43 | 159 |
| MS.gene54761.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 3.22e-12 | 68.9 |
| MS.gene54761.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.25e-11 | 66.6 |
| MS.gene54761.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.32e-11 | 66.2 |
| MS.gene54761.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 4.64e-11 | 65.5 |
Find 148 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACCATTCTTCAAGAATT+TGG | 0.066665 | 1.2:-72727151 | None:intergenic |
| GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 1.2:+72726307 | MS.gene54761:CDS |
| GTCTACAAGATTGGAGGAAT+TGG | 0.315206 | 1.2:+72726736 | MS.gene54761:CDS |
| GCCTCTTAGGCTCATTGATT+TGG | 0.315866 | 1.2:-72726678 | None:intergenic |
| TGTCAAGAATGTTGCTGTTA+AGG | 0.325240 | 1.2:+72726912 | MS.gene54761:CDS |
| TCACCATTCTTCAAGAATTT+GGG | 0.331757 | 1.2:-72727150 | None:intergenic |
| ATAGCCAACCTTCTTCAAAT+AGG | 0.332380 | 1.2:-72726542 | None:intergenic |
| ATTCCATTTGTTCCCATCTC+TGG | 0.368209 | 1.2:+72726577 | MS.gene54761:CDS |
| AAGCTCGCAGCCTCCTTGGC+TGG | 0.368924 | 1.2:-72726976 | None:intergenic |
| CTTCTTCTTCAATGCTGACT+TGG | 0.371330 | 1.2:-72727337 | None:intergenic |
| CTCCTTGGCTGGGTCATCCT+TGG | 0.371873 | 1.2:-72726965 | None:intergenic |
| ATATCTACCCTTGGAGTACT+TGG | 0.380807 | 1.2:-72726494 | None:intergenic |
| ACTAAGATTGATAGGCGTTC+TGG | 0.382761 | 1.2:+72727108 | MS.gene54761:CDS |
| GCTCTAACAGAGGCCCTTCC+TGG | 0.389893 | 1.2:+72726871 | MS.gene54761:CDS |
| GGATCCCAGTGGAGGACTTA+AGG | 0.415493 | 1.2:+72727311 | MS.gene54761:CDS |
| GCAAAAGTGACAACCATTCC+AGG | 0.418006 | 1.2:-72726799 | None:intergenic |
| CTCATCATTGATTCCACTAC+TGG | 0.419293 | 1.2:+72726238 | MS.gene54761:CDS |
| GAGGTGTGGCAGTCAAGAAC+AGG | 0.420700 | 1.2:-72727054 | None:intergenic |
| ATGAATCACCCTGGCCAGAT+TGG | 0.425183 | 1.2:+72727018 | MS.gene54761:CDS |
| CCTGTGGGGCGTGTCGAGAC+TGG | 0.431830 | 1.2:+72726766 | MS.gene54761:CDS |
| CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 1.2:+72727024 | MS.gene54761:CDS |
| GCCCCTTCGACTACCACTTC+AGG | 0.433104 | 1.2:+72726711 | MS.gene54761:CDS |
| GTCATCGGCCATGTTGACTC+TGG | 0.440627 | 1.2:+72725932 | MS.gene54761:CDS |
| AGGACTAATGGGTAAGGAAA+AGG | 0.440646 | 1.2:+72725892 | None:intergenic |
| AGCGTTCATTCAAGTATGCC+TGG | 0.444655 | 1.2:+72726050 | MS.gene54761:CDS |
| GGGCATAGCCATTTCCAATC+TGG | 0.448022 | 1.2:-72727032 | None:intergenic |
| AGCTCGCAGCCTCCTTGGCT+GGG | 0.449031 | 1.2:-72726975 | None:intergenic |
| AAACCAGAGATGGGAACAAA+TGG | 0.449170 | 1.2:-72726580 | None:intergenic |
| ACTTCAGTTGTCAGTCCAGT+AGG | 0.456008 | 1.2:-72726823 | None:intergenic |
| CTTCAGGATGTCTACAAGAT+TGG | 0.458119 | 1.2:+72726727 | MS.gene54761:CDS |
| AGTCTCAACCACCATGGGCT+TGG | 0.462350 | 1.2:-72727199 | None:intergenic |
| ACCAAATCAATGAGCCTAAG+AGG | 0.463105 | 1.2:+72726677 | MS.gene54761:CDS |
| TGGGTCATCCTTGGAGTTTG+AGG | 0.465051 | 1.2:-72726956 | None:intergenic |
| CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 1.2:-72727196 | None:intergenic |
| TAGGCTCATTGATTTGGTCA+AGG | 0.472707 | 1.2:-72726672 | None:intergenic |
| GGCTTGTCTGAAGGCCTCTT+AGG | 0.473139 | 1.2:-72726691 | None:intergenic |
| TAGCCATTTCCAATCTGGCC+AGG | 0.474048 | 1.2:-72727027 | None:intergenic |
| AGGCTCATTGATTTGGTCAA+GGG | 0.475242 | 1.2:-72726671 | None:intergenic |
| TGCACTGTCATTGATGCCCC+TGG | 0.477178 | 1.2:+72726157 | MS.gene54761:CDS |
| TTAATGAAATCCCTGTGTCC+AGG | 0.479234 | 1.2:-72726175 | None:intergenic |
| TCACCATTGACATTGCTCTC+TGG | 0.481623 | 1.2:+72726110 | MS.gene54761:CDS |
| AGCTTGTTACTAAGATTGAT+AGG | 0.481965 | 1.2:+72727100 | MS.gene54761:CDS |
| ACAGTCAGCTTGGGATGTTC+CGG | 0.483896 | 1.2:-72726209 | None:intergenic |
| TACAAACCTTGACTGGTACA+AGG | 0.490199 | 1.2:+72726630 | MS.gene54761:CDS |
| TCATCCTATTTGAAGAAGGT+TGG | 0.491235 | 1.2:+72726538 | MS.gene54761:CDS |
| GATTGATAGGCGTTCTGGTA+AGG | 0.495592 | 1.2:+72727113 | MS.gene54761:CDS |
| ATCTCCCTCAAAACCAGAGA+TGG | 0.496573 | 1.2:-72726590 | None:intergenic |
| TGAGAACGGCACAGTCAGCT+TGG | 0.498317 | 1.2:-72726219 | None:intergenic |
| CTGACCATCCTTAGAAATAC+CGG | 0.501461 | 1.2:-72726272 | None:intergenic |
| AGTTTCATCCTATTTGAAGA+AGG | 0.501588 | 1.2:+72726534 | MS.gene54761:CDS |
| ATCATTGATTCCACTACTGG+TGG | 0.502099 | 1.2:+72726241 | MS.gene54761:CDS |
| GAGAACGGCACAGTCAGCTT+GGG | 0.505334 | 1.2:-72726218 | None:intergenic |
| CTTCAGTTGTCAGTCCAGTA+GGG | 0.506099 | 1.2:-72726822 | None:intergenic |
| AGTAAAGCTCGCAGCCTCCT+TGG | 0.506205 | 1.2:-72726980 | None:intergenic |
| AATTTCATCATATCTACCCT+TGG | 0.508007 | 1.2:-72726503 | None:intergenic |
| AATGACAGTGCAGTAGTACT+TGG | 0.509426 | 1.2:-72726146 | None:intergenic |
| CATCAAGGCTGTGGAGAAGA+AGG | 0.510945 | 1.2:+72727290 | MS.gene54761:CDS |
| AGGAATTGGAACTGTGCCTG+TGG | 0.517140 | 1.2:+72726750 | MS.gene54761:CDS |
| GGTCACCTTAAGTCCTCCAC+TGG | 0.520286 | 1.2:-72727316 | None:intergenic |
| CAGGATGTCTACAAGATTGG+AGG | 0.523217 | 1.2:+72726730 | MS.gene54761:CDS |
| TAATGAAATCCCTGTGTCCA+GGG | 0.528272 | 1.2:-72726174 | None:intergenic |
| GAGCCCAAATTCTTGAAGAA+TGG | 0.528480 | 1.2:+72727147 | MS.gene54761:CDS |
| TCCCACATTGTCACCAGGAA+GGG | 0.528721 | 1.2:-72726884 | None:intergenic |
| CATTGATGCCCCTGGACACA+GGG | 0.535845 | 1.2:+72726165 | MS.gene54761:CDS |
| GGAATTGGAACTGTGCCTGT+GGG | 0.536194 | 1.2:+72726751 | MS.gene54761:CDS |
| TCATTGATGCCCCTGGACAC+AGG | 0.539611 | 1.2:+72726164 | MS.gene54761:CDS |
| CTTCCAGAGAGCAATGTCAA+TGG | 0.541189 | 1.2:-72726113 | None:intergenic |
| CATATCAACATTGTGGTCAT+CGG | 0.541947 | 1.2:+72725917 | MS.gene54761:CDS |
| AGTCGAAGGGGCTTGTCTGA+AGG | 0.542120 | 1.2:-72726700 | None:intergenic |
| CACTTGATCTACAAGCTTGG+AGG | 0.545798 | 1.2:+72725974 | MS.gene54761:CDS |
| GGCTTCAAAACCACCAGTAG+TGG | 0.551737 | 1.2:-72726251 | None:intergenic |
| TGTGGCTGTTGGCGTCATCA+AGG | 0.552638 | 1.2:+72727275 | MS.gene54761:CDS |
| GGTCACTTGATCTACAAGCT+TGG | 0.555547 | 1.2:+72725971 | MS.gene54761:CDS |
| CCAGTCTCGACACGCCCCAC+AGG | 0.557031 | 1.2:-72726766 | None:intergenic |
| TCAAGGGCCTCAAGAAGGGT+TGG | 0.557590 | 1.2:-72726655 | None:intergenic |
| TCAACCACCATGGGCTTGGT+GGG | 0.557624 | 1.2:-72727195 | None:intergenic |
| TTGGTCAAGGGCCTCAAGAA+GGG | 0.558003 | 1.2:-72726659 | None:intergenic |
| TTGGACCCTTGTACCAGTCA+AGG | 0.558366 | 1.2:-72726636 | None:intergenic |
| AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 1.2:-72726297 | None:intergenic |
| CTCAAGGCTGAACGTGAAAG+AGG | 0.559327 | 1.2:+72726085 | MS.gene54761:CDS |
| TTTGGTCAAGGGCCTCAAGA+AGG | 0.560467 | 1.2:-72726660 | None:intergenic |
| TTCTTGAAGAATGGTGATGC+TGG | 0.561159 | 1.2:+72727156 | MS.gene54761:CDS |
| TCTGGGAAATCAACCACCAC+TGG | 0.562550 | 1.2:+72725950 | MS.gene54761:CDS |
| GAAGCCGGTATTTCTAAGGA+TGG | 0.564413 | 1.2:+72726268 | MS.gene54761:CDS |
| ACAAACCTTGACTGGTACAA+GGG | 0.567625 | 1.2:+72726631 | MS.gene54761:CDS |
| TCATCGGCCATGTTGACTCT+GGG | 0.571507 | 1.2:+72725933 | MS.gene54761:CDS |
| TTCATTAAGAACATGATCAC+CGG | 0.572337 | 1.2:+72726190 | MS.gene54761:CDS |
| AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 1.2:-72726296 | None:intergenic |
| AGCGCTCTACAAACCTTGAC+TGG | 0.575793 | 1.2:+72726623 | MS.gene54761:CDS |
| GAGAAAGTCTCAACCACCAT+GGG | 0.575954 | 1.2:-72727204 | None:intergenic |
| ATCCTGAAGTGGTAGTCGAA+GGG | 0.576252 | 1.2:-72726713 | None:intergenic |
| CTTGAGCTTGTCAAGGACCC+AGG | 0.577041 | 1.2:-72726068 | None:intergenic |
| TATCTACCCTTGGAGTACTT+GGG | 0.580849 | 1.2:-72726493 | None:intergenic |
| TTGACAAGCGTGTCATTGAG+AGG | 0.584549 | 1.2:+72725999 | MS.gene54761:CDS |
| ATCCCACATTGTCACCAGGA+AGG | 0.585536 | 1.2:-72726885 | None:intergenic |
| GAGACTGGTGTCATAAAACC+TGG | 0.585699 | 1.2:+72726781 | MS.gene54761:CDS |
| CTGGGTCCTTGACAAGCTCA+AGG | 0.585742 | 1.2:+72726069 | MS.gene54761:CDS |
| GGCCCTTCCTGGTGACAATG+TGG | 0.586985 | 1.2:+72726882 | MS.gene54761:CDS |
| CTGTTAAGGATCTCAAGCGT+GGG | 0.589274 | 1.2:+72726926 | MS.gene54761:CDS |
| CATCCTGAAGTGGTAGTCGA+AGG | 0.591035 | 1.2:-72726714 | None:intergenic |
| TTCTCTGAATATCCTCCACT+CGG | 0.591172 | 1.2:+72727222 | MS.gene54761:CDS |
| GCCCTTCCTGGTGACAATGT+GGG | 0.592402 | 1.2:+72726883 | MS.gene54761:CDS |
| TTGATTTCCCAGAGTCAACA+TGG | 0.596206 | 1.2:-72725940 | None:intergenic |
| TAGATATGATGAAATTGTGA+AGG | 0.599770 | 1.2:+72726510 | MS.gene54761:CDS |
| GCATGTCTCTAACAGCAAAA+CGG | 0.600985 | 1.2:-72727245 | None:intergenic |
| CTCCAAGGATGACCCAGCCA+AGG | 0.602045 | 1.2:+72726963 | MS.gene54761:CDS |
| GCGTTCATTCAAGTATGCCT+GGG | 0.605879 | 1.2:+72726051 | MS.gene54761:CDS |
| GTCACCTTAAGTCCTCCACT+GGG | 0.606003 | 1.2:-72727315 | None:intergenic |
| TCTCCCTCAAAACCAGAGAT+GGG | 0.607478 | 1.2:-72726589 | None:intergenic |
| GATGATTCCCACCAAGCCCA+TGG | 0.611182 | 1.2:+72727188 | MS.gene54761:CDS |
| TACTACACCCAAGTACTCCA+AGG | 0.613862 | 1.2:+72726486 | MS.gene54761:CDS |
| AAAGGTTCATATCAACATTG+TGG | 0.619488 | 1.2:+72725910 | MS.gene54761:CDS |
| CAAGGGTCCAACCCTTCTTG+AGG | 0.620566 | 1.2:+72726648 | MS.gene54761:CDS |
| TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 1.2:-72726312 | None:intergenic |
| ATCTTGTAGACATCCTGAAG+TGG | 0.621388 | 1.2:-72726724 | None:intergenic |
| GCTGTTAAGGATCTCAAGCG+TGG | 0.622485 | 1.2:+72726925 | MS.gene54761:CDS |
| TGTTGGCGTCATCAAGGCTG+TGG | 0.622557 | 1.2:+72727281 | MS.gene54761:CDS |
| TTCAGTTGTCAGTCCAGTAG+GGG | 0.622733 | 1.2:-72726821 | None:intergenic |
| AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 1.2:-72727026 | None:intergenic |
| GACAACTGAAGTCAAGTCTG+TGG | 0.624055 | 1.2:+72726834 | MS.gene54761:CDS |
| ACAGCAAAACGGCCGAGTGG+AGG | 0.624787 | 1.2:-72727234 | None:intergenic |
| TGGTGTCATAAAACCTGGAA+TGG | 0.625384 | 1.2:+72726786 | MS.gene54761:CDS |
| TCCTGAAGTGGTAGTCGAAG+GGG | 0.627928 | 1.2:-72726712 | None:intergenic |
| AGGTGTGGCAGTCAAGAACA+GGG | 0.628146 | 1.2:-72727053 | None:intergenic |
| GTTCAGCCTTGAGCTTGTCA+AGG | 0.628494 | 1.2:-72726075 | None:intergenic |
| GCATCATGAAGCTCTAACAG+AGG | 0.633418 | 1.2:+72726861 | MS.gene54761:CDS |
| GTATGTTGCCTCAAACTCCA+AGG | 0.633897 | 1.2:+72726948 | MS.gene54761:CDS |
| AGAGAAAGTCTCAACCACCA+TGG | 0.641605 | 1.2:-72727205 | None:intergenic |
| ATGCGTCAAACTGTGGCTGT+TGG | 0.643159 | 1.2:+72727264 | MS.gene54761:CDS |
| TTCTGGTAAGGAGATTGAGA+AGG | 0.643722 | 1.2:+72727125 | MS.gene54761:CDS |
| GAATTGGAACTGTGCCTGTG+GGG | 0.644316 | 1.2:+72726752 | MS.gene54761:CDS |
| AGTGGAATCAATGATGAGAA+CGG | 0.644693 | 1.2:-72726233 | None:intergenic |
| AAACTTGACAGCAATGTGAG+AGG | 0.653594 | 1.2:-72727073 | None:intergenic |
| AATGAAATCCCTGTGTCCAG+GGG | 0.656838 | 1.2:-72726173 | None:intergenic |
| TTAAATCCCACATTGTCACC+AGG | 0.657091 | 1.2:-72726889 | None:intergenic |
| AATGATCTGCTGTTGCAACA+AGG | 0.659392 | 1.2:+72726339 | MS.gene54761:CDS |
| CAAGGATGACCCAGCCAAGG+AGG | 0.659665 | 1.2:+72726966 | MS.gene54761:CDS |
| GAGAAGAAGGATCCCAGTGG+AGG | 0.667988 | 1.2:+72727303 | MS.gene54761:CDS |
| ACTACACCCAAGTACTCCAA+GGG | 0.678033 | 1.2:+72726487 | MS.gene54761:CDS |
| CTTGTAGATCAAGTGACCAG+TGG | 0.682705 | 1.2:-72725966 | None:intergenic |
| TAGAGACATGCGTCAAACTG+TGG | 0.690315 | 1.2:+72727257 | MS.gene54761:CDS |
| CTAACAGCAAAACGGCCGAG+TGG | 0.692072 | 1.2:-72727237 | None:intergenic |
| GTAGATCAAGTGACCAGTGG+TGG | 0.699002 | 1.2:-72725963 | None:intergenic |
| GTGATCATAATGAATCACCC+TGG | 0.699056 | 1.2:+72727009 | MS.gene54761:CDS |
| GATTCCCACCAAGCCCATGG+TGG | 0.723849 | 1.2:+72727191 | MS.gene54761:CDS |
| GGTGTGGCAGTCAAGAACAG+GGG | 0.727394 | 1.2:-72727052 | None:intergenic |
| TGACAGCAATGTGAGAGGTG+TGG | 0.729691 | 1.2:-72727068 | None:intergenic |
| GTGGAGAAGAAGGATCCCAG+TGG | 0.734762 | 1.2:+72727300 | MS.gene54761:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAAATATACAACTTCAA+GGG | - | chr1.2:72726382-72726401 | None:intergenic | 20.0% |
| !! | TAATCAAATATACAACTTCA+AGG | - | chr1.2:72726383-72726402 | None:intergenic | 20.0% |
| ! | ATCAAATATACAACTTCAAG+GGG | - | chr1.2:72726381-72726400 | None:intergenic | 25.0% |
| ! | TAGATATGATGAAATTGTGA+AGG | + | chr1.2:72726510-72726529 | MS.gene54761:CDS | 25.0% |
| AAAGGTTCATATCAACATTG+TGG | + | chr1.2:72725910-72725929 | MS.gene54761:CDS | 30.0% | |
| AATTTCATCATATCTACCCT+TGG | - | chr1.2:72726506-72726525 | None:intergenic | 30.0% | |
| AGTTTCATCCTATTTGAAGA+AGG | + | chr1.2:72726534-72726553 | MS.gene54761:CDS | 30.0% | |
| ATCACCATTCTTCAAGAATT+TGG | - | chr1.2:72727154-72727173 | None:intergenic | 30.0% | |
| TCACCATTCTTCAAGAATTT+GGG | - | chr1.2:72727153-72727172 | None:intergenic | 30.0% | |
| TTCATTAAGAACATGATCAC+CGG | + | chr1.2:72726190-72726209 | MS.gene54761:CDS | 30.0% | |
| ! | GAACAAATGGAATTTTGTCT+GGG | - | chr1.2:72726570-72726589 | None:intergenic | 30.0% |
| !! | AGCTTGTTACTAAGATTGAT+AGG | + | chr1.2:72727100-72727119 | MS.gene54761:CDS | 30.0% |
| AGTGGAATCAATGATGAGAA+CGG | - | chr1.2:72726236-72726255 | None:intergenic | 35.0% | |
| ATAGCCAACCTTCTTCAAAT+AGG | - | chr1.2:72726545-72726564 | None:intergenic | 35.0% | |
| ATCCATCTGTTCAAGATAGA+TGG | - | chr1.2:72726464-72726483 | None:intergenic | 35.0% | |
| CATATCAACATTGTGGTCAT+CGG | + | chr1.2:72725917-72725936 | MS.gene54761:CDS | 35.0% | |
| TCATCCTATTTGAAGAAGGT+TGG | + | chr1.2:72726538-72726557 | MS.gene54761:CDS | 35.0% | |
| ! | GGAACAAATGGAATTTTGTC+TGG | - | chr1.2:72726571-72726590 | None:intergenic | 35.0% |
| ! | TGTCAAGAATGTTGCTGTTA+AGG | + | chr1.2:72726912-72726931 | MS.gene54761:CDS | 35.0% |
| !!! | TTTTGAAGCCGGTATTTCTA+AGG | + | chr1.2:72726264-72726283 | MS.gene54761:CDS | 35.0% |
| AAACCAGAGATGGGAACAAA+TGG | - | chr1.2:72726583-72726602 | None:intergenic | 40.0% | |
| AAACTTGACAGCAATGTGAG+AGG | - | chr1.2:72727076-72727095 | None:intergenic | 40.0% | |
| AATGACAGTGCAGTAGTACT+TGG | - | chr1.2:72726149-72726168 | None:intergenic | 40.0% | |
| AATGATCTGCTGTTGCAACA+AGG | + | chr1.2:72726339-72726358 | MS.gene54761:CDS | 40.0% | |
| ACAAACCTTGACTGGTACAA+GGG | + | chr1.2:72726631-72726650 | MS.gene54761:CDS | 40.0% | |
| ACCAAATCAATGAGCCTAAG+AGG | + | chr1.2:72726677-72726696 | MS.gene54761:CDS | 40.0% | |
| ACTAAGATTGATAGGCGTTC+TGG | + | chr1.2:72727108-72727127 | MS.gene54761:CDS | 40.0% | |
| ATCTTGTAGACATCCTGAAG+TGG | - | chr1.2:72726727-72726746 | None:intergenic | 40.0% | |
| ATTCCATTTGTTCCCATCTC+TGG | + | chr1.2:72726577-72726596 | MS.gene54761:CDS | 40.0% | |
| CTGACCATCCTTAGAAATAC+CGG | - | chr1.2:72726275-72726294 | None:intergenic | 40.0% | |
| CTTCAGGATGTCTACAAGAT+TGG | + | chr1.2:72726727-72726746 | MS.gene54761:CDS | 40.0% | |
| GAGCCCAAATTCTTGAAGAA+TGG | + | chr1.2:72727147-72727166 | MS.gene54761:CDS | 40.0% | |
| GCATGTCTCTAACAGCAAAA+CGG | - | chr1.2:72727248-72727267 | None:intergenic | 40.0% | |
| GTCTACAAGATTGGAGGAAT+TGG | + | chr1.2:72726736-72726755 | MS.gene54761:CDS | 40.0% | |
| GTGATCATAATGAATCACCC+TGG | + | chr1.2:72727009-72727028 | MS.gene54761:CDS | 40.0% | |
| TAATGAAATCCCTGTGTCCA+GGG | - | chr1.2:72726177-72726196 | None:intergenic | 40.0% | |
| TACAAACCTTGACTGGTACA+AGG | + | chr1.2:72726630-72726649 | MS.gene54761:CDS | 40.0% | |
| TGCCATCTATCTTGAACAGA+TGG | + | chr1.2:72726459-72726478 | MS.gene54761:intron | 40.0% | |
| TTAAATCCCACATTGTCACC+AGG | - | chr1.2:72726892-72726911 | None:intergenic | 40.0% | |
| TTAATGAAATCCCTGTGTCC+AGG | - | chr1.2:72726178-72726197 | None:intergenic | 40.0% | |
| TTCTCTGAATATCCTCCACT+CGG | + | chr1.2:72727222-72727241 | MS.gene54761:CDS | 40.0% | |
| TTCTGGTAAGGAGATTGAGA+AGG | + | chr1.2:72727125-72727144 | MS.gene54761:CDS | 40.0% | |
| TTGATTTCCCAGAGTCAACA+TGG | - | chr1.2:72725943-72725962 | None:intergenic | 40.0% | |
| ! | ATATCTACCCTTGGAGTACT+TGG | - | chr1.2:72726497-72726516 | None:intergenic | 40.0% |
| ! | CTTCTTCTTCAATGCTGACT+TGG | - | chr1.2:72727340-72727359 | None:intergenic | 40.0% |
| ! | TATCTACCCTTGGAGTACTT+GGG | - | chr1.2:72726496-72726515 | None:intergenic | 40.0% |
| ! | TTCTTGAAGAATGGTGATGC+TGG | + | chr1.2:72727156-72727175 | MS.gene54761:CDS | 40.0% |
| !! | AGGCTCATTGATTTGGTCAA+GGG | - | chr1.2:72726674-72726693 | None:intergenic | 40.0% |
| !! | ATCATTGATTCCACTACTGG+TGG | + | chr1.2:72726241-72726260 | MS.gene54761:CDS | 40.0% |
| !! | CTCATCATTGATTCCACTAC+TGG | + | chr1.2:72726238-72726257 | MS.gene54761:CDS | 40.0% |
| !! | TAGGCTCATTGATTTGGTCA+AGG | - | chr1.2:72726675-72726694 | None:intergenic | 40.0% |
| !! | TGGTGTCATAAAACCTGGAA+TGG | + | chr1.2:72726786-72726805 | MS.gene54761:CDS | 40.0% |
| AATGAAATCCCTGTGTCCAG+GGG | - | chr1.2:72726176-72726195 | None:intergenic | 45.0% | |
| ACTACACCCAAGTACTCCAA+GGG | + | chr1.2:72726487-72726506 | MS.gene54761:CDS | 45.0% | |
| ACTTCAGTTGTCAGTCCAGT+AGG | - | chr1.2:72726826-72726845 | None:intergenic | 45.0% | |
| AGAGAAAGTCTCAACCACCA+TGG | - | chr1.2:72727208-72727227 | None:intergenic | 45.0% | |
| AGCGTTCATTCAAGTATGCC+TGG | + | chr1.2:72726050-72726069 | MS.gene54761:CDS | 45.0% | |
| ATCCTGAAGTGGTAGTCGAA+GGG | - | chr1.2:72726716-72726735 | None:intergenic | 45.0% | |
| ATCTCCCTCAAAACCAGAGA+TGG | - | chr1.2:72726593-72726612 | None:intergenic | 45.0% | |
| CACTTGATCTACAAGCTTGG+AGG | + | chr1.2:72725974-72725993 | MS.gene54761:CDS | 45.0% | |
| CAGGATGTCTACAAGATTGG+AGG | + | chr1.2:72726730-72726749 | MS.gene54761:CDS | 45.0% | |
| CTGTTAAGGATCTCAAGCGT+GGG | + | chr1.2:72726926-72726945 | MS.gene54761:CDS | 45.0% | |
| CTTCAGTTGTCAGTCCAGTA+GGG | - | chr1.2:72726825-72726844 | None:intergenic | 45.0% | |
| CTTCCAGAGAGCAATGTCAA+TGG | - | chr1.2:72726116-72726135 | None:intergenic | 45.0% | |
| CTTGTAGATCAAGTGACCAG+TGG | - | chr1.2:72725969-72725988 | None:intergenic | 45.0% | |
| GACAACTGAAGTCAAGTCTG+TGG | + | chr1.2:72726834-72726853 | MS.gene54761:CDS | 45.0% | |
| GAGAAAGTCTCAACCACCAT+GGG | - | chr1.2:72727207-72727226 | None:intergenic | 45.0% | |
| GATTGATAGGCGTTCTGGTA+AGG | + | chr1.2:72727113-72727132 | MS.gene54761:CDS | 45.0% | |
| GCAAAAGTGACAACCATTCC+AGG | - | chr1.2:72726802-72726821 | None:intergenic | 45.0% | |
| GCGTTCATTCAAGTATGCCT+GGG | + | chr1.2:72726051-72726070 | MS.gene54761:CDS | 45.0% | |
| GGTCACTTGATCTACAAGCT+TGG | + | chr1.2:72725971-72725990 | MS.gene54761:CDS | 45.0% | |
| GTATGTTGCCTCAAACTCCA+AGG | + | chr1.2:72726948-72726967 | MS.gene54761:CDS | 45.0% | |
| TACTACACCCAAGTACTCCA+AGG | + | chr1.2:72726486-72726505 | MS.gene54761:CDS | 45.0% | |
| TAGAGACATGCGTCAAACTG+TGG | + | chr1.2:72727257-72727276 | MS.gene54761:CDS | 45.0% | |
| TCACACCAAGAGTGAAAGCA+AGG | - | chr1.2:72726315-72726334 | None:intergenic | 45.0% | |
| TCACCATTGACATTGCTCTC+TGG | + | chr1.2:72726110-72726129 | MS.gene54761:CDS | 45.0% | |
| TCTCCCTCAAAACCAGAGAT+GGG | - | chr1.2:72726592-72726611 | None:intergenic | 45.0% | |
| TTCAGTTGTCAGTCCAGTAG+GGG | - | chr1.2:72726824-72726843 | None:intergenic | 45.0% | |
| ! | AAGCAAGGAGAGCATGTTCA+CGG | - | chr1.2:72726300-72726319 | None:intergenic | 45.0% |
| ! | GAAGCCGGTATTTCTAAGGA+TGG | + | chr1.2:72726268-72726287 | MS.gene54761:CDS | 45.0% |
| ! | GCATCATGAAGCTCTAACAG+AGG | + | chr1.2:72726861-72726880 | MS.gene54761:CDS | 45.0% |
| ! | GCCTCTTAGGCTCATTGATT+TGG | - | chr1.2:72726681-72726700 | None:intergenic | 45.0% |
| ! | TTGACAAGCGTGTCATTGAG+AGG | + | chr1.2:72725999-72726018 | MS.gene54761:CDS | 45.0% |
| !! | GAGACTGGTGTCATAAAACC+TGG | + | chr1.2:72726781-72726800 | MS.gene54761:CDS | 45.0% |
| !!! | ACTACTGGTGGTTTTGAAGC+CGG | + | chr1.2:72726253-72726272 | MS.gene54761:CDS | 45.0% |
| !!! | GTTCCCATCTCTGGTTTTGA+GGG | + | chr1.2:72726586-72726605 | MS.gene54761:CDS | 45.0% |
| !!! | TGTTCCCATCTCTGGTTTTG+AGG | + | chr1.2:72726585-72726604 | MS.gene54761:CDS | 45.0% |
| ACAGTCAGCTTGGGATGTTC+CGG | - | chr1.2:72726212-72726231 | None:intergenic | 50.0% | |
| AGCCATTTCCAATCTGGCCA+GGG | - | chr1.2:72727029-72727048 | None:intergenic | 50.0% | |
| AGCGCTCTACAAACCTTGAC+TGG | + | chr1.2:72726623-72726642 | MS.gene54761:CDS | 50.0% | |
| AGGAATTGGAACTGTGCCTG+TGG | + | chr1.2:72726750-72726769 | MS.gene54761:CDS | 50.0% | |
| AGGTGTGGCAGTCAAGAACA+GGG | - | chr1.2:72727056-72727075 | None:intergenic | 50.0% | |
| ATCCCACATTGTCACCAGGA+AGG | - | chr1.2:72726888-72726907 | None:intergenic | 50.0% | |
| ATGAATCACCCTGGCCAGAT+TGG | + | chr1.2:72727018-72727037 | MS.gene54761:CDS | 50.0% | |
| ATGCGTCAAACTGTGGCTGT+TGG | + | chr1.2:72727264-72727283 | MS.gene54761:CDS | 50.0% | |
| CATCAAGGCTGTGGAGAAGA+AGG | + | chr1.2:72727290-72727309 | MS.gene54761:CDS | 50.0% | |
| CATCCTGAAGTGGTAGTCGA+AGG | - | chr1.2:72726717-72726736 | None:intergenic | 50.0% | |
| CTCAAGGCTGAACGTGAAAG+AGG | + | chr1.2:72726085-72726104 | MS.gene54761:CDS | 50.0% | |
| GAATTGGAACTGTGCCTGTG+GGG | + | chr1.2:72726752-72726771 | MS.gene54761:CDS | 50.0% | |
| GCTCTCCTTGCTTTCACTCT+TGG | + | chr1.2:72726307-72726326 | MS.gene54761:CDS | 50.0% | |
| GCTGTTAAGGATCTCAAGCG+TGG | + | chr1.2:72726925-72726944 | MS.gene54761:CDS | 50.0% | |
| GGAATTGGAACTGTGCCTGT+GGG | + | chr1.2:72726751-72726770 | MS.gene54761:CDS | 50.0% | |
| GGCTTCAAAACCACCAGTAG+TGG | - | chr1.2:72726254-72726273 | None:intergenic | 50.0% | |
| GGGCATAGCCATTTCCAATC+TGG | - | chr1.2:72727035-72727054 | None:intergenic | 50.0% | |
| GTAGATCAAGTGACCAGTGG+TGG | - | chr1.2:72725966-72725985 | None:intergenic | 50.0% | |
| GTCACCTTAAGTCCTCCACT+GGG | - | chr1.2:72727318-72727337 | None:intergenic | 50.0% | |
| GTTCAGCCTTGAGCTTGTCA+AGG | - | chr1.2:72726078-72726097 | None:intergenic | 50.0% | |
| TAGCCATTTCCAATCTGGCC+AGG | - | chr1.2:72727030-72727049 | None:intergenic | 50.0% | |
| TCCCACATTGTCACCAGGAA+GGG | - | chr1.2:72726887-72726906 | None:intergenic | 50.0% | |
| TCCTGAAGTGGTAGTCGAAG+GGG | - | chr1.2:72726715-72726734 | None:intergenic | 50.0% | |
| TCTGGGAAATCAACCACCAC+TGG | + | chr1.2:72725950-72725969 | MS.gene54761:CDS | 50.0% | |
| TGACAGCAATGTGAGAGGTG+TGG | - | chr1.2:72727071-72727090 | None:intergenic | 50.0% | |
| TGGGTCATCCTTGGAGTTTG+AGG | - | chr1.2:72726959-72726978 | None:intergenic | 50.0% | |
| TTGGACCCTTGTACCAGTCA+AGG | - | chr1.2:72726639-72726658 | None:intergenic | 50.0% | |
| TTGGTCAAGGGCCTCAAGAA+GGG | - | chr1.2:72726662-72726681 | None:intergenic | 50.0% | |
| TTTGGTCAAGGGCCTCAAGA+AGG | - | chr1.2:72726663-72726682 | None:intergenic | 50.0% | |
| ! | AGCAAGGAGAGCATGTTCAC+GGG | - | chr1.2:72726299-72726318 | None:intergenic | 50.0% |
| !! | TCATCGGCCATGTTGACTCT+GGG | + | chr1.2:72725933-72725952 | MS.gene54761:CDS | 50.0% |
| !!! | GTTGTCACTTTTGCCCCTAC+TGG | + | chr1.2:72726808-72726827 | MS.gene54761:CDS | 50.0% |
| AGTAAAGCTCGCAGCCTCCT+TGG | - | chr1.2:72726983-72727002 | None:intergenic | 55.0% | |
| AGTCGAAGGGGCTTGTCTGA+AGG | - | chr1.2:72726703-72726722 | None:intergenic | 55.0% | |
| AGTCTCAACCACCATGGGCT+TGG | - | chr1.2:72727202-72727221 | None:intergenic | 55.0% | |
| CAAGGGTCCAACCCTTCTTG+AGG | + | chr1.2:72726648-72726667 | MS.gene54761:CDS | 55.0% | |
| CACCCTGGCCAGATTGGAAA+TGG | + | chr1.2:72727024-72727043 | MS.gene54761:CDS | 55.0% | |
| CATTGATGCCCCTGGACACA+GGG | + | chr1.2:72726165-72726184 | MS.gene54761:CDS | 55.0% | |
| CTAACAGCAAAACGGCCGAG+TGG | - | chr1.2:72727240-72727259 | None:intergenic | 55.0% | |
| CTGGGTCCTTGACAAGCTCA+AGG | + | chr1.2:72726069-72726088 | MS.gene54761:CDS | 55.0% | |
| CTTGAGCTTGTCAAGGACCC+AGG | - | chr1.2:72726071-72726090 | None:intergenic | 55.0% | |
| GAGAACGGCACAGTCAGCTT+GGG | - | chr1.2:72726221-72726240 | None:intergenic | 55.0% | |
| GAGAAGAAGGATCCCAGTGG+AGG | + | chr1.2:72727303-72727322 | MS.gene54761:CDS | 55.0% | |
| GAGGTGTGGCAGTCAAGAAC+AGG | - | chr1.2:72727057-72727076 | None:intergenic | 55.0% | |
| GATGATTCCCACCAAGCCCA+TGG | + | chr1.2:72727188-72727207 | MS.gene54761:CDS | 55.0% | |
| GCCCTTCCTGGTGACAATGT+GGG | + | chr1.2:72726883-72726902 | MS.gene54761:CDS | 55.0% | |
| GGATCCCAGTGGAGGACTTA+AGG | + | chr1.2:72727311-72727330 | MS.gene54761:CDS | 55.0% | |
| GGCTTGTCTGAAGGCCTCTT+AGG | - | chr1.2:72726694-72726713 | None:intergenic | 55.0% | |
| GGTCACCTTAAGTCCTCCAC+TGG | - | chr1.2:72727319-72727338 | None:intergenic | 55.0% | |
| GGTGTGGCAGTCAAGAACAG+GGG | - | chr1.2:72727055-72727074 | None:intergenic | 55.0% | |
| GTGGAGAAGAAGGATCCCAG+TGG | + | chr1.2:72727300-72727319 | MS.gene54761:CDS | 55.0% | |
| TCAAGGGCCTCAAGAAGGGT+TGG | - | chr1.2:72726658-72726677 | None:intergenic | 55.0% | |
| TCATTGATGCCCCTGGACAC+AGG | + | chr1.2:72726164-72726183 | MS.gene54761:CDS | 55.0% | |
| TGAGAACGGCACAGTCAGCT+TGG | - | chr1.2:72726222-72726241 | None:intergenic | 55.0% | |
| TGCACTGTCATTGATGCCCC+TGG | + | chr1.2:72726157-72726176 | MS.gene54761:CDS | 55.0% | |
| TGTGGCTGTTGGCGTCATCA+AGG | + | chr1.2:72727275-72727294 | MS.gene54761:CDS | 55.0% | |
| TGTTGGCGTCATCAAGGCTG+TGG | + | chr1.2:72727281-72727300 | MS.gene54761:CDS | 55.0% | |
| ! | TCAACCACCATGGGCTTGGT+GGG | - | chr1.2:72727198-72727217 | None:intergenic | 55.0% |
| !! | GTCATCGGCCATGTTGACTC+TGG | + | chr1.2:72725932-72725951 | MS.gene54761:CDS | 55.0% |
| ACAGCAAAACGGCCGAGTGG+AGG | - | chr1.2:72727237-72727256 | None:intergenic | 60.0% | |
| CAAGGATGACCCAGCCAAGG+AGG | + | chr1.2:72726966-72726985 | MS.gene54761:CDS | 60.0% | |
| CTCAACCACCATGGGCTTGG+TGG | - | chr1.2:72727199-72727218 | None:intergenic | 60.0% | |
| CTCCAAGGATGACCCAGCCA+AGG | + | chr1.2:72726963-72726982 | MS.gene54761:CDS | 60.0% | |
| CTCCTTGGCTGGGTCATCCT+TGG | - | chr1.2:72726968-72726987 | None:intergenic | 60.0% | |
| GATTCCCACCAAGCCCATGG+TGG | + | chr1.2:72727191-72727210 | MS.gene54761:CDS | 60.0% | |
| GCCCCTTCGACTACCACTTC+AGG | + | chr1.2:72726711-72726730 | MS.gene54761:CDS | 60.0% | |
| GCTCTAACAGAGGCCCTTCC+TGG | + | chr1.2:72726871-72726890 | MS.gene54761:CDS | 60.0% | |
| GGCCCTTCCTGGTGACAATG+TGG | + | chr1.2:72726882-72726901 | MS.gene54761:CDS | 60.0% | |
| AAGCTCGCAGCCTCCTTGGC+TGG | - | chr1.2:72726979-72726998 | None:intergenic | 65.0% | |
| AGCTCGCAGCCTCCTTGGCT+GGG | - | chr1.2:72726978-72726997 | None:intergenic | 65.0% | |
| CCAGTCTCGACACGCCCCAC+AGG | - | chr1.2:72726769-72726788 | None:intergenic | 70.0% | |
| CCTGTGGGGCGTGTCGAGAC+TGG | + | chr1.2:72726766-72726785 | MS.gene54761:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 72725899 | 72727362 | 72725899 | ID=MS.gene54761 |
| chr1.2 | mRNA | 72725899 | 72727362 | 72725899 | ID=MS.gene54761.t1;Parent=MS.gene54761 |
| chr1.2 | exon | 72725899 | 72726360 | 72725899 | ID=MS.gene54761.t1.exon1;Parent=MS.gene54761.t1 |
| chr1.2 | CDS | 72725899 | 72726360 | 72725899 | ID=cds.MS.gene54761.t1;Parent=MS.gene54761.t1 |
| chr1.2 | exon | 72726478 | 72727362 | 72726478 | ID=MS.gene54761.t1.exon2;Parent=MS.gene54761.t1 |
| chr1.2 | CDS | 72726478 | 72727362 | 72726478 | ID=cds.MS.gene54761.t1;Parent=MS.gene54761.t1 |
| Gene Sequence |
| Protein sequence |