Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016105.t1 | XP_003591959.2 | 99.6 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 6.00E-259 | 902.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016105.t1 | O24534 | 95.5 | 448 | 19 | 1 | 1 | 448 | 1 | 447 | 1.2e-252 | 873.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016105.t1 | G7I9L3 | 99.6 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 4.3e-259 | 902.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016105.t1 | MTR_1g495705 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 918 |
MS.gene016105.t1 | MTR_1g095650 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 918 |
MS.gene016105.t1 | MTR_1g095703 | 99.330 | 448 | 3 | 0 | 1 | 448 | 1 | 448 | 0.0 | 917 |
MS.gene016105.t1 | MTR_6g021800 | 96.429 | 448 | 15 | 1 | 1 | 448 | 1 | 447 | 0.0 | 893 |
MS.gene016105.t1 | MTR_6g021805 | 96.429 | 448 | 15 | 1 | 1 | 448 | 1 | 447 | 0.0 | 893 |
MS.gene016105.t1 | MTR_4g014810 | 96.205 | 448 | 16 | 1 | 1 | 448 | 1 | 447 | 0.0 | 888 |
MS.gene016105.t1 | MTR_1g013680 | 96.231 | 451 | 14 | 1 | 1 | 448 | 1 | 451 | 0.0 | 886 |
MS.gene016105.t1 | MTR_1g085410 | 82.719 | 434 | 75 | 0 | 1 | 434 | 1 | 434 | 0.0 | 744 |
MS.gene016105.t1 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 736 |
MS.gene016105.t1 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 734 |
MS.gene016105.t1 | MTR_1g024175 | 79.263 | 434 | 90 | 0 | 1 | 434 | 1 | 434 | 0.0 | 728 |
MS.gene016105.t1 | MTR_8g014590 | 79.955 | 449 | 88 | 1 | 1 | 447 | 1 | 449 | 0.0 | 724 |
MS.gene016105.t1 | MTR_1g095650 | 99.424 | 347 | 2 | 0 | 102 | 448 | 1 | 347 | 0.0 | 709 |
MS.gene016105.t1 | MTR_2g082730 | 72.644 | 435 | 102 | 2 | 1 | 433 | 1 | 420 | 0.0 | 645 |
MS.gene016105.t1 | MTR_5g037350 | 67.872 | 470 | 114 | 1 | 3 | 435 | 13 | 482 | 0.0 | 635 |
MS.gene016105.t1 | MTR_1g089520 | 71.395 | 430 | 105 | 3 | 4 | 432 | 5 | 417 | 0.0 | 628 |
MS.gene016105.t1 | MTR_2g082665 | 67.586 | 435 | 98 | 2 | 1 | 433 | 1 | 394 | 0.0 | 587 |
MS.gene016105.t1 | MTR_2g037420 | 65.820 | 433 | 105 | 3 | 1 | 431 | 1 | 392 | 0.0 | 562 |
MS.gene016105.t1 | MTR_8g013910 | 63.920 | 449 | 127 | 5 | 1 | 433 | 1 | 430 | 0.0 | 551 |
MS.gene016105.t1 | MTR_2g080210 | 64.828 | 435 | 117 | 4 | 1 | 432 | 1 | 402 | 0.0 | 551 |
MS.gene016105.t1 | MTR_8g008740 | 78.462 | 325 | 69 | 1 | 1 | 324 | 1 | 325 | 0.0 | 539 |
MS.gene016105.t1 | MTR_1g112460 | 66.107 | 298 | 60 | 4 | 155 | 447 | 1 | 262 | 1.11e-126 | 368 |
MS.gene016105.t1 | MTR_1g495735 | 76.617 | 201 | 37 | 1 | 240 | 430 | 106 | 306 | 1.63e-101 | 305 |
MS.gene016105.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 5.30e-17 | 82.0 |
MS.gene016105.t1 | MTR_6g080420 | 37.963 | 432 | 254 | 6 | 5 | 428 | 89 | 514 | 5.19e-97 | 301 |
MS.gene016105.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 43 | 470 | 8.11e-94 | 291 |
MS.gene016105.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 49 | 476 | 9.12e-94 | 291 |
MS.gene016105.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 70 | 497 | 2.46e-93 | 291 |
MS.gene016105.t1 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 275 | 704 | 1.06e-91 | 292 |
MS.gene016105.t1 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 348 | 777 | 5.28e-91 | 292 |
MS.gene016105.t1 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 8.65e-90 | 274 |
MS.gene016105.t1 | MTR_4g054970 | 57.025 | 242 | 75 | 4 | 193 | 431 | 50 | 265 | 3.11e-81 | 252 |
MS.gene016105.t1 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 7.74e-13 | 68.9 |
MS.gene016105.t1 | MTR_1g024165 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 1.42e-78 | 241 |
MS.gene016105.t1 | MTR_8g014950 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 1.74e-47 | 159 |
MS.gene016105.t1 | MTR_7g094460 | 30.365 | 438 | 245 | 14 | 3 | 429 | 59 | 447 | 1.36e-45 | 164 |
MS.gene016105.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 8.88e-43 | 149 |
MS.gene016105.t1 | MTR_2g021300 | 29.613 | 439 | 247 | 12 | 3 | 429 | 46 | 434 | 4.95e-42 | 154 |
MS.gene016105.t1 | MTR_3g076660 | 29.955 | 444 | 250 | 15 | 3 | 429 | 88 | 487 | 7.17e-41 | 152 |
MS.gene016105.t1 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 213 | 294 | 2 | 83 | 2.31e-28 | 110 |
MS.gene016105.t1 | MTR_3g097250 | 26.471 | 272 | 143 | 9 | 9 | 272 | 85 | 307 | 1.53e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene016105.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
MS.gene016105.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
MS.gene016105.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
MS.gene016105.t1 | AT1G07920 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
MS.gene016105.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
MS.gene016105.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
MS.gene016105.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
MS.gene016105.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
MS.gene016105.t1 | AT1G07930 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
MS.gene016105.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
MS.gene016105.t1 | AT1G07930 | 86.325 | 117 | 15 | 1 | 331 | 447 | 254 | 369 | 4.46e-64 | 211 |
MS.gene016105.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.35e-94 | 294 |
MS.gene016105.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.35e-94 | 294 |
MS.gene016105.t1 | AT1G18070 | 36.927 | 436 | 256 | 6 | 5 | 424 | 99 | 531 | 3.41e-91 | 286 |
MS.gene016105.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 1.02e-90 | 289 |
MS.gene016105.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.05e-90 | 289 |
MS.gene016105.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.05e-90 | 289 |
MS.gene016105.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 5.91e-90 | 289 |
MS.gene016105.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 6.36e-90 | 289 |
MS.gene016105.t1 | AT1G35550 | 78.641 | 103 | 22 | 0 | 335 | 437 | 1 | 103 | 1.45e-53 | 174 |
MS.gene016105.t1 | AT4G02930 | 30.296 | 439 | 245 | 15 | 3 | 429 | 63 | 452 | 7.48e-44 | 160 |
MS.gene016105.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 9.49e-44 | 160 |
MS.gene016105.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 9.49e-44 | 160 |
MS.gene016105.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 3.08e-12 | 69.3 |
MS.gene016105.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.86e-11 | 65.9 |
MS.gene016105.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.92e-11 | 66.2 |
MS.gene016105.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 3.76e-11 | 65.9 |
Find 135 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCACCATTCTTCAAGAATT+TGG | 0.066665 | 1.2:-7697091 | None:intergenic |
GTCTACAAGATTGGAGGAAT+TGG | 0.281818 | 1.2:+7696676 | MS.gene016105:CDS |
GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 1.2:+7696268 | MS.gene016105:CDS |
TTCATTAAGAACATGATTAC+TGG | 0.308905 | 1.2:+7696151 | MS.gene016105:CDS |
TGTTAAGAACGTTGCTGTTA+AGG | 0.312399 | 1.2:+7696852 | MS.gene016105:CDS |
GCCTCTTAGGCTCGTTGATT+TGG | 0.315296 | 1.2:-7696618 | None:intergenic |
ACCAGTGGTGGTTGACTTCC+CGG | 0.329357 | 1.2:-7695912 | None:intergenic |
CACATTAACATTGTTGTCAT+TGG | 0.329838 | 1.2:+7695878 | MS.gene016105:CDS |
TCACCATTCTTCAAGAATTT+GGG | 0.331757 | 1.2:-7697090 | None:intergenic |
ATAGCCAACCTTCTTCAAAT+AGG | 0.332380 | 1.2:-7696482 | None:intergenic |
ACTAAGATTGACAGGCGTTC+TGG | 0.356033 | 1.2:+7697048 | MS.gene016105:CDS |
GAGGTGTGGCAGTCAAGAAC+AGG | 0.357372 | 1.2:-7696994 | None:intergenic |
GCTCTCACTGAGGCTCTTCC+CGG | 0.361996 | 1.2:+7696811 | MS.gene016105:CDS |
ATTCCATTTGTTCCCATCTC+TGG | 0.368209 | 1.2:+7696517 | MS.gene016105:CDS |
AAGTTAGCGGCCTCCTTGGC+AGG | 0.394061 | 1.2:-7696916 | None:intergenic |
CTGATCATTGATTCCACTAC+TGG | 0.405045 | 1.2:+7696199 | MS.gene016105:CDS |
CTCCTTGGCAGGGTCATCCT+TGG | 0.412873 | 1.2:-7696905 | None:intergenic |
ATGAATCACCCTGGCCAGAT+TGG | 0.417716 | 1.2:+7696958 | MS.gene016105:CDS |
GCAAAAGTGACAACCATTCC+AGG | 0.418006 | 1.2:-7696739 | None:intergenic |
CCTGTGGGGCGTGTCGAGAC+TGG | 0.431830 | 1.2:+7696706 | MS.gene016105:CDS |
GGCTTGTCTGATGGCCTCTT+AGG | 0.432559 | 1.2:-7696631 | None:intergenic |
CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 1.2:+7696964 | MS.gene016105:CDS |
GCCCCTCCGACTACCACTTC+AGG | 0.433104 | 1.2:+7696651 | MS.gene016105:CDS |
AGGACAAATGGGTAAGGAAA+AGG | 0.440646 | 1.2:+7695853 | None:intergenic |
GGGCATAGCCATTTCCAATC+TGG | 0.448022 | 1.2:-7696972 | None:intergenic |
AAACCAGAGATGGGAACAAA+TGG | 0.449170 | 1.2:-7696520 | None:intergenic |
CTGACCATCCTTTGAAATAC+CGG | 0.450328 | 1.2:-7696233 | None:intergenic |
GTCATTGGCCATGTCGACTC+CGG | 0.454084 | 1.2:+7695893 | MS.gene016105:CDS |
ACTTCAGTTGTCAGTCCAGT+AGG | 0.456008 | 1.2:-7696763 | None:intergenic |
CTTCAGGATGTCTACAAGAT+TGG | 0.458119 | 1.2:+7696667 | MS.gene016105:CDS |
AGCGTTCATTCAAGTATGCT+TGG | 0.461530 | 1.2:+7696011 | MS.gene016105:CDS |
AGTCTCAACCACCATGGGCT+TGG | 0.462350 | 1.2:-7697139 | None:intergenic |
AGGAATTGGGACTGTGCCTG+TGG | 0.463901 | 1.2:+7696690 | MS.gene016105:CDS |
TCTACAAGATTGGAGGAATT+GGG | 0.467601 | 1.2:+7696677 | MS.gene016105:CDS |
ACCAAATCAACGAGCCTAAG+AGG | 0.467614 | 1.2:+7696617 | MS.gene016105:CDS |
CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 1.2:-7697136 | None:intergenic |
TAGCCATTTCCAATCTGGCC+AGG | 0.474048 | 1.2:-7696967 | None:intergenic |
TGCACTGTCATTGATGCCCC+TGG | 0.477178 | 1.2:+7696118 | MS.gene016105:CDS |
TTAATGAAATCCCTGTGTCC+AGG | 0.479234 | 1.2:-7696136 | None:intergenic |
TACCTACCCTTCGAGTACTT+TGG | 0.480160 | 1.2:-7696433 | None:intergenic |
GCGTTCATTCAAGTATGCTT+GGG | 0.487854 | 1.2:+7696012 | MS.gene016105:CDS |
TCATCCTATTTGAAGAAGGT+TGG | 0.491235 | 1.2:+7696478 | MS.gene016105:CDS |
AGCAAATTTGACAGCAATGT+GGG | 0.494938 | 1.2:-7697016 | None:intergenic |
AGTAAAGTTAGCGGCCTCCT+TGG | 0.495389 | 1.2:-7696920 | None:intergenic |
AGTCGGAGGGGCTTGTCTGA+TGG | 0.496444 | 1.2:-7696640 | None:intergenic |
ATCTCCCTCAAAACCAGAGA+TGG | 0.496573 | 1.2:-7696530 | None:intergenic |
GGAATTGGGACTGTGCCTGT+GGG | 0.501531 | 1.2:+7696691 | MS.gene016105:CDS |
AGTTTCATCCTATTTGAAGA+AGG | 0.501588 | 1.2:+7696474 | MS.gene016105:CDS |
ATCATTGATTCCACTACTGG+TGG | 0.502099 | 1.2:+7696202 | MS.gene016105:CDS |
TACAAATCTTGACTGGTACA+AGG | 0.502738 | 1.2:+7696570 | MS.gene016105:CDS |
AGCTTGTTACTAAGATTGAC+AGG | 0.504274 | 1.2:+7697040 | MS.gene016105:CDS |
CTTCAGTTGTCAGTCCAGTA+GGG | 0.506099 | 1.2:-7696762 | None:intergenic |
ATTAAATCCCACATTGTCAC+CGG | 0.519224 | 1.2:-7696830 | None:intergenic |
TCCGGGAAGTCAACCACCAC+TGG | 0.520912 | 1.2:+7695911 | MS.gene016105:CDS |
AGGGTCATCCTTGGAGTTTG+AGG | 0.522734 | 1.2:-7696896 | None:intergenic |
CAGGATGTCTACAAGATTGG+AGG | 0.523217 | 1.2:+7696670 | MS.gene016105:CDS |
TCATTGGCCATGTCGACTCC+GGG | 0.523741 | 1.2:+7695894 | MS.gene016105:CDS |
TAATGAAATCCCTGTGTCCA+GGG | 0.528272 | 1.2:-7696135 | None:intergenic |
GAGCCCAAATTCTTGAAGAA+TGG | 0.528480 | 1.2:+7697087 | MS.gene016105:CDS |
TTCTCTGAGTATCCTCCACT+TGG | 0.530256 | 1.2:+7697162 | MS.gene016105:CDS |
TATCAAGGCTGTGGAGAAGA+AGG | 0.530959 | 1.2:+7697230 | MS.gene016105:CDS |
CTCAAAGCTGAACGTGAAAG+AGG | 0.531334 | 1.2:+7696046 | MS.gene016105:CDS |
CATTGATGCCCCTGGACACA+GGG | 0.535845 | 1.2:+7696126 | MS.gene016105:CDS |
TCATTGATGCCCCTGGACAC+AGG | 0.539611 | 1.2:+7696125 | MS.gene016105:CDS |
TGTGGCTGTTGGTGTTATCA+AGG | 0.541484 | 1.2:+7697215 | MS.gene016105:CDS |
CTTCGAGTACTTTGGTGTAG+TGG | 0.545264 | 1.2:-7696425 | None:intergenic |
CACTTGATCTACAAGCTTGG+AGG | 0.545798 | 1.2:+7695935 | MS.gene016105:CDS |
GAGAAAGTCTCAACCACCAT+GGG | 0.549740 | 1.2:-7697144 | None:intergenic |
GATTGACAGGCGTTCTGGAA+AGG | 0.550491 | 1.2:+7697053 | MS.gene016105:CDS |
GGCTTCAAAACCACCAGTAG+TGG | 0.551737 | 1.2:-7696212 | None:intergenic |
GGCTCTTCCCGGTGACAATG+TGG | 0.552654 | 1.2:+7696822 | MS.gene016105:CDS |
GGTCACTTGATCTACAAGCT+TGG | 0.555547 | 1.2:+7695932 | MS.gene016105:CDS |
CCAGTCTCGACACGCCCCAC+AGG | 0.557031 | 1.2:-7696706 | None:intergenic |
TCAACCACCATGGGCTTGGT+GGG | 0.557624 | 1.2:-7697135 | None:intergenic |
AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 1.2:-7696258 | None:intergenic |
AGGTGTGGCAGTCAAGAACA+GGG | 0.559985 | 1.2:-7696993 | None:intergenic |
CACTTGAGAAGTAAAGTTAG+CGG | 0.560708 | 1.2:-7696929 | None:intergenic |
TTCTTGAAGAATGGTGATGC+TGG | 0.561159 | 1.2:+7697096 | MS.gene016105:CDS |
TTGACAAGCGTGTGATTGAG+AGG | 0.564366 | 1.2:+7695960 | MS.gene016105:CDS |
ACAAATCTTGACTGGTACAA+GGG | 0.566035 | 1.2:+7696571 | MS.gene016105:CDS |
TTTGGTCAAGAGCCTCAAGA+AGG | 0.570297 | 1.2:-7696600 | None:intergenic |
AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 1.2:-7696257 | None:intergenic |
GAAGCCGGTATTTCAAAGGA+TGG | 0.572749 | 1.2:+7696229 | MS.gene016105:CDS |
TTGACTTCCCGGAGTCGACA+TGG | 0.574810 | 1.2:-7695901 | None:intergenic |
ATCCTGAAGTGGTAGTCGGA+GGG | 0.576252 | 1.2:-7696653 | None:intergenic |
GAGACTGGTGTCATAAAACC+TGG | 0.585699 | 1.2:+7696721 | MS.gene016105:CDS |
CAAGGGTCCTACCCTTCTTG+AGG | 0.587059 | 1.2:+7696588 | MS.gene016105:CDS |
GCTCTTCCCGGTGACAATGT+GGG | 0.588610 | 1.2:+7696823 | MS.gene016105:CDS |
GCATATCCCTGACAGCAAAA+CGG | 0.593078 | 1.2:-7697185 | None:intergenic |
TGTTGGTGTTATCAAGGCTG+TGG | 0.597147 | 1.2:+7697221 | MS.gene016105:CDS |
TAGGTATGATGAAATTGTGA+AGG | 0.599770 | 1.2:+7696450 | MS.gene016105:CDS |
CACTACACCAAAGTACTCGA+AGG | 0.602464 | 1.2:+7696426 | MS.gene016105:CDS |
ATGCGTCAAACTGTGGCTGT+TGG | 0.604242 | 1.2:+7697204 | MS.gene016105:CDS |
TCTCCCTCAAAACCAGAGAT+GGG | 0.607478 | 1.2:-7696529 | None:intergenic |
TCCTGAAGTGGTAGTCGGAG+GGG | 0.608492 | 1.2:-7696652 | None:intergenic |
AGCGCTCTACAAATCTTGAC+TGG | 0.610562 | 1.2:+7696563 | MS.gene016105:CDS |
GATGATTCCCACCAAGCCCA+TGG | 0.611182 | 1.2:+7697128 | MS.gene016105:CDS |
GAATTGGGACTGTGCCTGTG+GGG | 0.615616 | 1.2:+7696692 | MS.gene016105:CDS |
GACAACTGAAGTCAAGTCTG+TGG | 0.617234 | 1.2:+7696774 | MS.gene016105:CDS |
CTCCAAGGATGACCCTGCCA+AGG | 0.619064 | 1.2:+7696903 | MS.gene016105:CDS |
TCAAGAGCCTCAAGAAGGGT+AGG | 0.620041 | 1.2:-7696595 | None:intergenic |
TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 1.2:-7696273 | None:intergenic |
ATCTTGTAGACATCCTGAAG+TGG | 0.621388 | 1.2:-7696664 | None:intergenic |
TTCAGTTGTCAGTCCAGTAG+GGG | 0.622733 | 1.2:-7696761 | None:intergenic |
AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 1.2:-7696966 | None:intergenic |
ACAGCAAAACGGCCAAGTGG+AGG | 0.624787 | 1.2:-7697174 | None:intergenic |
TGGTGTCATAAAACCTGGAA+TGG | 0.625384 | 1.2:+7696726 | MS.gene016105:CDS |
AGAGAAAGTCTCAACCACCA+TGG | 0.628507 | 1.2:-7697145 | None:intergenic |
AATGATTTGTTGCTGCAACA+AGG | 0.628678 | 1.2:+7696300 | MS.gene016105:CDS |
TTCTGGAAAGGAGATTGAGA+AGG | 0.629354 | 1.2:+7697065 | MS.gene016105:CDS |
TTATGTTGCCTCAAACTCCA+AGG | 0.633897 | 1.2:+7696888 | MS.gene016105:CDS |
AGTTAGCGGCCTCCTTGGCA+GGG | 0.634693 | 1.2:-7696915 | None:intergenic |
CAAGGATGACCCTGCCAAGG+AGG | 0.636072 | 1.2:+7696906 | MS.gene016105:CDS |
CATCCTGAAGTGGTAGTCGG+AGG | 0.637451 | 1.2:-7696654 | None:intergenic |
AGACATCCTGAAGTGGTAGT+CGG | 0.638051 | 1.2:-7696657 | None:intergenic |
CAGCAAATTTGACAGCAATG+TGG | 0.639349 | 1.2:-7697017 | None:intergenic |
TTGGTCAAGAGCCTCAAGAA+GGG | 0.643393 | 1.2:-7696599 | None:intergenic |
TGACAGCAATGTGGGAGGTG+TGG | 0.647495 | 1.2:-7697008 | None:intergenic |
CACCAAAGTACTCGAAGGGT+AGG | 0.649681 | 1.2:+7696431 | MS.gene016105:CDS |
AATGAAATCCCTGTGTCCAG+GGG | 0.656838 | 1.2:-7696134 | None:intergenic |
GCTGTTAAGGATCTCAAGCG+TGG | 0.663761 | 1.2:+7696865 | MS.gene016105:CDS |
TTAAATCCCACATTGTCACC+GGG | 0.665158 | 1.2:-7696829 | None:intergenic |
ACTACACCAAAGTACTCGAA+GGG | 0.668068 | 1.2:+7696427 | MS.gene016105:CDS |
CAGGGATATGCGTCAAACTG+TGG | 0.672188 | 1.2:+7697197 | MS.gene016105:CDS |
GAGAAGAAGGATCCCAGCGG+AGG | 0.673598 | 1.2:+7697243 | MS.gene016105:CDS |
AAATTTGACAGCAATGTGGG+AGG | 0.676474 | 1.2:-7697013 | None:intergenic |
CTGACAGCAAAACGGCCAAG+TGG | 0.682401 | 1.2:-7697177 | None:intergenic |
CTTGTAGATCAAGTGACCAG+TGG | 0.682705 | 1.2:-7695927 | None:intergenic |
GTGATCATCATGAATCACCC+TGG | 0.684375 | 1.2:+7696949 | MS.gene016105:CDS |
GTAGATCAAGTGACCAGTGG+TGG | 0.699002 | 1.2:-7695924 | None:intergenic |
TCACAATTGACATTGCTCTG+TGG | 0.708352 | 1.2:+7696071 | MS.gene016105:CDS |
GGTGTGGCAGTCAAGAACAG+GGG | 0.711459 | 1.2:-7696992 | None:intergenic |
GATTCCCACCAAGCCCATGG+TGG | 0.723849 | 1.2:+7697131 | MS.gene016105:CDS |
GCATCATGAAGCTCTCACTG+AGG | 0.742195 | 1.2:+7696801 | MS.gene016105:CDS |
GTGGAGAAGAAGGATCCCAG+CGG | 0.769725 | 1.2:+7697240 | MS.gene016105:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTAATTACAATAATAATCAG+AGG | - | chr1.2:7696355-7696374 | None:intergenic | 20.0% |
! | TTCATTAAGAACATGATTAC+TGG | + | chr1.2:7696151-7696170 | MS.gene016105:CDS | 25.0% |
AGTTTCATCCTATTTGAAGA+AGG | + | chr1.2:7696474-7696493 | MS.gene016105:CDS | 30.0% | |
ATCACCATTCTTCAAGAATT+TGG | - | chr1.2:7697094-7697113 | None:intergenic | 30.0% | |
CACATTAACATTGTTGTCAT+TGG | + | chr1.2:7695878-7695897 | MS.gene016105:CDS | 30.0% | |
TAGGTATGATGAAATTGTGA+AGG | + | chr1.2:7696450-7696469 | MS.gene016105:CDS | 30.0% | |
TCACCATTCTTCAAGAATTT+GGG | - | chr1.2:7697093-7697112 | None:intergenic | 30.0% | |
! | GAACAAATGGAATTTTGTCT+GGG | - | chr1.2:7696510-7696529 | None:intergenic | 30.0% |
!! | TTTTTGCTATCTTGAACAGA+TGG | + | chr1.2:7696399-7696418 | MS.gene016105:intron | 30.0% |
ACAAATCTTGACTGGTACAA+GGG | + | chr1.2:7696571-7696590 | MS.gene016105:CDS | 35.0% | |
AGCAAATTTGACAGCAATGT+GGG | - | chr1.2:7697019-7697038 | None:intergenic | 35.0% | |
ATAGCCAACCTTCTTCAAAT+AGG | - | chr1.2:7696485-7696504 | None:intergenic | 35.0% | |
ATTAAATCCCACATTGTCAC+CGG | - | chr1.2:7696833-7696852 | None:intergenic | 35.0% | |
CACTTGAGAAGTAAAGTTAG+CGG | - | chr1.2:7696932-7696951 | None:intergenic | 35.0% | |
TACAAATCTTGACTGGTACA+AGG | + | chr1.2:7696570-7696589 | MS.gene016105:CDS | 35.0% | |
TCATCCTATTTGAAGAAGGT+TGG | + | chr1.2:7696478-7696497 | MS.gene016105:CDS | 35.0% | |
TCTACAAGATTGGAGGAATT+GGG | + | chr1.2:7696677-7696696 | MS.gene016105:CDS | 35.0% | |
! | GGAACAAATGGAATTTTGTC+TGG | - | chr1.2:7696511-7696530 | None:intergenic | 35.0% |
! | TGTTAAGAACGTTGCTGTTA+AGG | + | chr1.2:7696852-7696871 | MS.gene016105:CDS | 35.0% |
!! | AATGATTTGTTGCTGCAACA+AGG | + | chr1.2:7696300-7696319 | MS.gene016105:CDS | 35.0% |
!! | AGCTTGTTACTAAGATTGAC+AGG | + | chr1.2:7697040-7697059 | MS.gene016105:CDS | 35.0% |
!!! | TTTTGAAGCCGGTATTTCAA+AGG | + | chr1.2:7696225-7696244 | MS.gene016105:CDS | 35.0% |
AAACCAGAGATGGGAACAAA+TGG | - | chr1.2:7696523-7696542 | None:intergenic | 40.0% | |
AAATTTGACAGCAATGTGGG+AGG | - | chr1.2:7697016-7697035 | None:intergenic | 40.0% | |
AGCGTTCATTCAAGTATGCT+TGG | + | chr1.2:7696011-7696030 | MS.gene016105:CDS | 40.0% | |
ATCTTGTAGACATCCTGAAG+TGG | - | chr1.2:7696667-7696686 | None:intergenic | 40.0% | |
ATTCCATTTGTTCCCATCTC+TGG | + | chr1.2:7696517-7696536 | MS.gene016105:CDS | 40.0% | |
CAGCAAATTTGACAGCAATG+TGG | - | chr1.2:7697020-7697039 | None:intergenic | 40.0% | |
CTTCAGGATGTCTACAAGAT+TGG | + | chr1.2:7696667-7696686 | MS.gene016105:CDS | 40.0% | |
GAGCCCAAATTCTTGAAGAA+TGG | + | chr1.2:7697087-7697106 | MS.gene016105:CDS | 40.0% | |
GCGTTCATTCAAGTATGCTT+GGG | + | chr1.2:7696012-7696031 | MS.gene016105:CDS | 40.0% | |
GTCTACAAGATTGGAGGAAT+TGG | + | chr1.2:7696676-7696695 | MS.gene016105:CDS | 40.0% | |
TAATGAAATCCCTGTGTCCA+GGG | - | chr1.2:7696138-7696157 | None:intergenic | 40.0% | |
TCACAATTGACATTGCTCTG+TGG | + | chr1.2:7696071-7696090 | MS.gene016105:CDS | 40.0% | |
TTAAATCCCACATTGTCACC+GGG | - | chr1.2:7696832-7696851 | None:intergenic | 40.0% | |
TTAATGAAATCCCTGTGTCC+AGG | - | chr1.2:7696139-7696158 | None:intergenic | 40.0% | |
TTATGTTGCCTCAAACTCCA+AGG | + | chr1.2:7696888-7696907 | MS.gene016105:CDS | 40.0% | |
! | ACTACACCAAAGTACTCGAA+GGG | + | chr1.2:7696427-7696446 | MS.gene016105:CDS | 40.0% |
! | TTCTGGAAAGGAGATTGAGA+AGG | + | chr1.2:7697065-7697084 | MS.gene016105:CDS | 40.0% |
! | TTCTTGAAGAATGGTGATGC+TGG | + | chr1.2:7697096-7697115 | MS.gene016105:CDS | 40.0% |
!! | ATAATCAGAGGCACCTTCAA+AGG | - | chr1.2:7696343-7696362 | None:intergenic | 40.0% |
!! | ATCATTGATTCCACTACTGG+TGG | + | chr1.2:7696202-7696221 | MS.gene016105:CDS | 40.0% |
!! | CTGACCATCCTTTGAAATAC+CGG | - | chr1.2:7696236-7696255 | None:intergenic | 40.0% |
!! | CTGATCATTGATTCCACTAC+TGG | + | chr1.2:7696199-7696218 | MS.gene016105:CDS | 40.0% |
!! | GTTTTATTAAGTCCTCCGCT+GGG | - | chr1.2:7697258-7697277 | None:intergenic | 40.0% |
!! | TAATCAGAGGCACCTTCAAA+GGG | - | chr1.2:7696342-7696361 | None:intergenic | 40.0% |
!! | TGAACGTTTTAGCCCTTTGA+AGG | + | chr1.2:7696327-7696346 | MS.gene016105:intron | 40.0% |
!! | TGGTGTCATAAAACCTGGAA+TGG | + | chr1.2:7696726-7696745 | MS.gene016105:CDS | 40.0% |
!! | TGTTTTATTAAGTCCTCCGC+TGG | - | chr1.2:7697259-7697278 | None:intergenic | 40.0% |
AATGAAATCCCTGTGTCCAG+GGG | - | chr1.2:7696137-7696156 | None:intergenic | 45.0% | |
ACCAAATCAACGAGCCTAAG+AGG | + | chr1.2:7696617-7696636 | MS.gene016105:CDS | 45.0% | |
ACTAAGATTGACAGGCGTTC+TGG | + | chr1.2:7697048-7697067 | MS.gene016105:CDS | 45.0% | |
ACTTCAGTTGTCAGTCCAGT+AGG | - | chr1.2:7696766-7696785 | None:intergenic | 45.0% | |
AGACATCCTGAAGTGGTAGT+CGG | - | chr1.2:7696660-7696679 | None:intergenic | 45.0% | |
AGAGAAAGTCTCAACCACCA+TGG | - | chr1.2:7697148-7697167 | None:intergenic | 45.0% | |
AGCGCTCTACAAATCTTGAC+TGG | + | chr1.2:7696563-7696582 | MS.gene016105:CDS | 45.0% | |
ATCTCCCTCAAAACCAGAGA+TGG | - | chr1.2:7696533-7696552 | None:intergenic | 45.0% | |
CACTTGATCTACAAGCTTGG+AGG | + | chr1.2:7695935-7695954 | MS.gene016105:CDS | 45.0% | |
CAGGATGTCTACAAGATTGG+AGG | + | chr1.2:7696670-7696689 | MS.gene016105:CDS | 45.0% | |
CTCAAAGCTGAACGTGAAAG+AGG | + | chr1.2:7696046-7696065 | MS.gene016105:CDS | 45.0% | |
CTTCAGTTGTCAGTCCAGTA+GGG | - | chr1.2:7696765-7696784 | None:intergenic | 45.0% | |
CTTGTAGATCAAGTGACCAG+TGG | - | chr1.2:7695930-7695949 | None:intergenic | 45.0% | |
GAAGCCGGTATTTCAAAGGA+TGG | + | chr1.2:7696229-7696248 | MS.gene016105:CDS | 45.0% | |
GACAACTGAAGTCAAGTCTG+TGG | + | chr1.2:7696774-7696793 | MS.gene016105:CDS | 45.0% | |
GAGAAAGTCTCAACCACCAT+GGG | - | chr1.2:7697147-7697166 | None:intergenic | 45.0% | |
GCAAAAGTGACAACCATTCC+AGG | - | chr1.2:7696742-7696761 | None:intergenic | 45.0% | |
GCATATCCCTGACAGCAAAA+CGG | - | chr1.2:7697188-7697207 | None:intergenic | 45.0% | |
GGTCACTTGATCTACAAGCT+TGG | + | chr1.2:7695932-7695951 | MS.gene016105:CDS | 45.0% | |
GTGATCATCATGAATCACCC+TGG | + | chr1.2:7696949-7696968 | MS.gene016105:CDS | 45.0% | |
TACCTACCCTTCGAGTACTT+TGG | - | chr1.2:7696436-7696455 | None:intergenic | 45.0% | |
TATCAAGGCTGTGGAGAAGA+AGG | + | chr1.2:7697230-7697249 | MS.gene016105:CDS | 45.0% | |
TCACACCAAGAGTGAAAGCA+AGG | - | chr1.2:7696276-7696295 | None:intergenic | 45.0% | |
TCTCCCTCAAAACCAGAGAT+GGG | - | chr1.2:7696532-7696551 | None:intergenic | 45.0% | |
TTCAGTTGTCAGTCCAGTAG+GGG | - | chr1.2:7696764-7696783 | None:intergenic | 45.0% | |
TTCTCTGAGTATCCTCCACT+TGG | + | chr1.2:7697162-7697181 | MS.gene016105:CDS | 45.0% | |
TTGACAAGCGTGTGATTGAG+AGG | + | chr1.2:7695960-7695979 | MS.gene016105:CDS | 45.0% | |
TTGGTCAAGAGCCTCAAGAA+GGG | - | chr1.2:7696602-7696621 | None:intergenic | 45.0% | |
TTTGGTCAAGAGCCTCAAGA+AGG | - | chr1.2:7696603-7696622 | None:intergenic | 45.0% | |
! | AAGCAAGGAGAGCATGTTCA+CGG | - | chr1.2:7696261-7696280 | None:intergenic | 45.0% |
! | CACTACACCAAAGTACTCGA+AGG | + | chr1.2:7696426-7696445 | MS.gene016105:CDS | 45.0% |
! | CTTCGAGTACTTTGGTGTAG+TGG | - | chr1.2:7696428-7696447 | None:intergenic | 45.0% |
!! | GAGACTGGTGTCATAAAACC+TGG | + | chr1.2:7696721-7696740 | MS.gene016105:CDS | 45.0% |
!! | TGTGGCTGTTGGTGTTATCA+AGG | + | chr1.2:7697215-7697234 | MS.gene016105:CDS | 45.0% |
!! | TGTTGGTGTTATCAAGGCTG+TGG | + | chr1.2:7697221-7697240 | MS.gene016105:CDS | 45.0% |
!!! | ACTACTGGTGGTTTTGAAGC+CGG | + | chr1.2:7696214-7696233 | MS.gene016105:CDS | 45.0% |
!!! | GTTCCCATCTCTGGTTTTGA+GGG | + | chr1.2:7696526-7696545 | MS.gene016105:CDS | 45.0% |
!!! | TGTTCCCATCTCTGGTTTTG+AGG | + | chr1.2:7696525-7696544 | MS.gene016105:CDS | 45.0% |
AGCCATTTCCAATCTGGCCA+GGG | - | chr1.2:7696969-7696988 | None:intergenic | 50.0% | |
AGGGTCATCCTTGGAGTTTG+AGG | - | chr1.2:7696899-7696918 | None:intergenic | 50.0% | |
AGGTGTGGCAGTCAAGAACA+GGG | - | chr1.2:7696996-7697015 | None:intergenic | 50.0% | |
AGTAAAGTTAGCGGCCTCCT+TGG | - | chr1.2:7696923-7696942 | None:intergenic | 50.0% | |
ATCCTGAAGTGGTAGTCGGA+GGG | - | chr1.2:7696656-7696675 | None:intergenic | 50.0% | |
ATGAATCACCCTGGCCAGAT+TGG | + | chr1.2:7696958-7696977 | MS.gene016105:CDS | 50.0% | |
ATGCGTCAAACTGTGGCTGT+TGG | + | chr1.2:7697204-7697223 | MS.gene016105:CDS | 50.0% | |
CAGGGATATGCGTCAAACTG+TGG | + | chr1.2:7697197-7697216 | MS.gene016105:CDS | 50.0% | |
GCATCATGAAGCTCTCACTG+AGG | + | chr1.2:7696801-7696820 | MS.gene016105:CDS | 50.0% | |
GCTCTCCTTGCTTTCACTCT+TGG | + | chr1.2:7696268-7696287 | MS.gene016105:CDS | 50.0% | |
GCTGTTAAGGATCTCAAGCG+TGG | + | chr1.2:7696865-7696884 | MS.gene016105:CDS | 50.0% | |
GGCTTCAAAACCACCAGTAG+TGG | - | chr1.2:7696215-7696234 | None:intergenic | 50.0% | |
GGGCATAGCCATTTCCAATC+TGG | - | chr1.2:7696975-7696994 | None:intergenic | 50.0% | |
GTAGATCAAGTGACCAGTGG+TGG | - | chr1.2:7695927-7695946 | None:intergenic | 50.0% | |
TAGCCATTTCCAATCTGGCC+AGG | - | chr1.2:7696970-7696989 | None:intergenic | 50.0% | |
TCAAGAGCCTCAAGAAGGGT+AGG | - | chr1.2:7696598-7696617 | None:intergenic | 50.0% | |
! | AGCAAGGAGAGCATGTTCAC+GGG | - | chr1.2:7696260-7696279 | None:intergenic | 50.0% |
! | CACCAAAGTACTCGAAGGGT+AGG | + | chr1.2:7696431-7696450 | MS.gene016105:CDS | 50.0% |
! | GCCTCTTAGGCTCGTTGATT+TGG | - | chr1.2:7696621-7696640 | None:intergenic | 50.0% |
!! | ACTTGGCCGTTTTGCTGTCA+GGG | + | chr1.2:7697179-7697198 | MS.gene016105:CDS | 50.0% |
!! | GATTGACAGGCGTTCTGGAA+AGG | + | chr1.2:7697053-7697072 | MS.gene016105:CDS | 50.0% |
!!! | GTTGTCACTTTTGCCCCTAC+TGG | + | chr1.2:7696748-7696767 | MS.gene016105:CDS | 50.0% |
ACAGCAAAACGGCCAAGTGG+AGG | - | chr1.2:7697177-7697196 | None:intergenic | 55.0% | |
AGGAATTGGGACTGTGCCTG+TGG | + | chr1.2:7696690-7696709 | MS.gene016105:CDS | 55.0% | |
AGTCTCAACCACCATGGGCT+TGG | - | chr1.2:7697142-7697161 | None:intergenic | 55.0% | |
CAAGGGTCCTACCCTTCTTG+AGG | + | chr1.2:7696588-7696607 | MS.gene016105:CDS | 55.0% | |
CACCCTGGCCAGATTGGAAA+TGG | + | chr1.2:7696964-7696983 | MS.gene016105:CDS | 55.0% | |
CATCCTGAAGTGGTAGTCGG+AGG | - | chr1.2:7696657-7696676 | None:intergenic | 55.0% | |
CATTGATGCCCCTGGACACA+GGG | + | chr1.2:7696126-7696145 | MS.gene016105:CDS | 55.0% | |
CTGACAGCAAAACGGCCAAG+TGG | - | chr1.2:7697180-7697199 | None:intergenic | 55.0% | |
GAATTGGGACTGTGCCTGTG+GGG | + | chr1.2:7696692-7696711 | MS.gene016105:CDS | 55.0% | |
GAGGTGTGGCAGTCAAGAAC+AGG | - | chr1.2:7696997-7697016 | None:intergenic | 55.0% | |
GATGATTCCCACCAAGCCCA+TGG | + | chr1.2:7697128-7697147 | MS.gene016105:CDS | 55.0% | |
GCTCTTCCCGGTGACAATGT+GGG | + | chr1.2:7696823-7696842 | MS.gene016105:CDS | 55.0% | |
GGAATTGGGACTGTGCCTGT+GGG | + | chr1.2:7696691-7696710 | MS.gene016105:CDS | 55.0% | |
GGCTTGTCTGATGGCCTCTT+AGG | - | chr1.2:7696634-7696653 | None:intergenic | 55.0% | |
GGTGTGGCAGTCAAGAACAG+GGG | - | chr1.2:7696995-7697014 | None:intergenic | 55.0% | |
GTGGAGAAGAAGGATCCCAG+CGG | + | chr1.2:7697240-7697259 | MS.gene016105:CDS | 55.0% | |
TCATTGATGCCCCTGGACAC+AGG | + | chr1.2:7696125-7696144 | MS.gene016105:CDS | 55.0% | |
TCCTGAAGTGGTAGTCGGAG+GGG | - | chr1.2:7696655-7696674 | None:intergenic | 55.0% | |
TGACAGCAATGTGGGAGGTG+TGG | - | chr1.2:7697011-7697030 | None:intergenic | 55.0% | |
TGCACTGTCATTGATGCCCC+TGG | + | chr1.2:7696118-7696137 | MS.gene016105:CDS | 55.0% | |
TTGACTTCCCGGAGTCGACA+TGG | - | chr1.2:7695904-7695923 | None:intergenic | 55.0% | |
! | ACCAGTGGTGGTTGACTTCC+CGG | - | chr1.2:7695915-7695934 | None:intergenic | 55.0% |
! | TCAACCACCATGGGCTTGGT+GGG | - | chr1.2:7697138-7697157 | None:intergenic | 55.0% |
!! | CACTTGGCCGTTTTGCTGTC+AGG | + | chr1.2:7697178-7697197 | MS.gene016105:CDS | 55.0% |
!! | GTCATTGGCCATGTCGACTC+CGG | + | chr1.2:7695893-7695912 | MS.gene016105:CDS | 55.0% |
!! | TCATTGGCCATGTCGACTCC+GGG | + | chr1.2:7695894-7695913 | MS.gene016105:CDS | 55.0% |
AAGTTAGCGGCCTCCTTGGC+AGG | - | chr1.2:7696919-7696938 | None:intergenic | 60.0% | |
AGTCGGAGGGGCTTGTCTGA+TGG | - | chr1.2:7696643-7696662 | None:intergenic | 60.0% | |
AGTTAGCGGCCTCCTTGGCA+GGG | - | chr1.2:7696918-7696937 | None:intergenic | 60.0% | |
CAAGGATGACCCTGCCAAGG+AGG | + | chr1.2:7696906-7696925 | MS.gene016105:CDS | 60.0% | |
CTCAACCACCATGGGCTTGG+TGG | - | chr1.2:7697139-7697158 | None:intergenic | 60.0% | |
CTCCAAGGATGACCCTGCCA+AGG | + | chr1.2:7696903-7696922 | MS.gene016105:CDS | 60.0% | |
CTCCTTGGCAGGGTCATCCT+TGG | - | chr1.2:7696908-7696927 | None:intergenic | 60.0% | |
GAGAAGAAGGATCCCAGCGG+AGG | + | chr1.2:7697243-7697262 | MS.gene016105:CDS | 60.0% | |
GATTCCCACCAAGCCCATGG+TGG | + | chr1.2:7697131-7697150 | MS.gene016105:CDS | 60.0% | |
GCTCTCACTGAGGCTCTTCC+CGG | + | chr1.2:7696811-7696830 | MS.gene016105:CDS | 60.0% | |
GGCTCTTCCCGGTGACAATG+TGG | + | chr1.2:7696822-7696841 | MS.gene016105:CDS | 60.0% | |
TCCGGGAAGTCAACCACCAC+TGG | + | chr1.2:7695911-7695930 | MS.gene016105:CDS | 60.0% | |
GCCCCTCCGACTACCACTTC+AGG | + | chr1.2:7696651-7696670 | MS.gene016105:CDS | 65.0% | |
CCAGTCTCGACACGCCCCAC+AGG | - | chr1.2:7696709-7696728 | None:intergenic | 70.0% | |
CCTGTGGGGCGTGTCGAGAC+TGG | + | chr1.2:7696706-7696725 | MS.gene016105:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 7695860 | 7697302 | 7695860 | ID=MS.gene016105 |
chr1.2 | mRNA | 7695860 | 7697302 | 7695860 | ID=MS.gene016105.t1;Parent=MS.gene016105 |
chr1.2 | exon | 7695860 | 7696321 | 7695860 | ID=MS.gene016105.t1.exon1;Parent=MS.gene016105.t1 |
chr1.2 | CDS | 7695860 | 7696321 | 7695860 | ID=cds.MS.gene016105.t1;Parent=MS.gene016105.t1 |
chr1.2 | exon | 7696418 | 7697302 | 7696418 | ID=MS.gene016105.t1.exon2;Parent=MS.gene016105.t1 |
chr1.2 | CDS | 7696418 | 7697302 | 7696418 | ID=cds.MS.gene016105.t1;Parent=MS.gene016105.t1 |
Gene Sequence |
Protein sequence |