Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33103.t1 | XP_003591959.2 | 99.6 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 6.00E-259 | 902.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33103.t1 | O24534 | 95.5 | 448 | 19 | 1 | 1 | 448 | 1 | 447 | 1.2e-252 | 873.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33103.t1 | G7I9L3 | 99.6 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 4.3e-259 | 902.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058469 | MS.gene33103 | 0.996582 | 2.09E-229 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33103.t1 | MTR_1g495705 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 918 |
| MS.gene33103.t1 | MTR_1g095650 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 918 |
| MS.gene33103.t1 | MTR_1g095703 | 99.330 | 448 | 3 | 0 | 1 | 448 | 1 | 448 | 0.0 | 917 |
| MS.gene33103.t1 | MTR_6g021800 | 96.429 | 448 | 15 | 1 | 1 | 448 | 1 | 447 | 0.0 | 893 |
| MS.gene33103.t1 | MTR_6g021805 | 96.429 | 448 | 15 | 1 | 1 | 448 | 1 | 447 | 0.0 | 893 |
| MS.gene33103.t1 | MTR_4g014810 | 96.205 | 448 | 16 | 1 | 1 | 448 | 1 | 447 | 0.0 | 888 |
| MS.gene33103.t1 | MTR_1g013680 | 96.231 | 451 | 14 | 1 | 1 | 448 | 1 | 451 | 0.0 | 886 |
| MS.gene33103.t1 | MTR_1g085410 | 82.719 | 434 | 75 | 0 | 1 | 434 | 1 | 434 | 0.0 | 744 |
| MS.gene33103.t1 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 736 |
| MS.gene33103.t1 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 734 |
| MS.gene33103.t1 | MTR_1g024175 | 79.263 | 434 | 90 | 0 | 1 | 434 | 1 | 434 | 0.0 | 728 |
| MS.gene33103.t1 | MTR_8g014590 | 79.955 | 449 | 88 | 1 | 1 | 447 | 1 | 449 | 0.0 | 724 |
| MS.gene33103.t1 | MTR_1g095650 | 99.424 | 347 | 2 | 0 | 102 | 448 | 1 | 347 | 0.0 | 709 |
| MS.gene33103.t1 | MTR_2g082730 | 72.644 | 435 | 102 | 2 | 1 | 433 | 1 | 420 | 0.0 | 645 |
| MS.gene33103.t1 | MTR_5g037350 | 67.872 | 470 | 114 | 1 | 3 | 435 | 13 | 482 | 0.0 | 635 |
| MS.gene33103.t1 | MTR_1g089520 | 71.395 | 430 | 105 | 3 | 4 | 432 | 5 | 417 | 0.0 | 628 |
| MS.gene33103.t1 | MTR_2g082665 | 67.586 | 435 | 98 | 2 | 1 | 433 | 1 | 394 | 0.0 | 587 |
| MS.gene33103.t1 | MTR_2g037420 | 65.820 | 433 | 105 | 3 | 1 | 431 | 1 | 392 | 0.0 | 562 |
| MS.gene33103.t1 | MTR_8g013910 | 63.920 | 449 | 127 | 5 | 1 | 433 | 1 | 430 | 0.0 | 551 |
| MS.gene33103.t1 | MTR_2g080210 | 64.828 | 435 | 117 | 4 | 1 | 432 | 1 | 402 | 0.0 | 551 |
| MS.gene33103.t1 | MTR_8g008740 | 78.462 | 325 | 69 | 1 | 1 | 324 | 1 | 325 | 0.0 | 539 |
| MS.gene33103.t1 | MTR_1g112460 | 66.107 | 298 | 60 | 4 | 155 | 447 | 1 | 262 | 1.11e-126 | 368 |
| MS.gene33103.t1 | MTR_1g495735 | 76.617 | 201 | 37 | 1 | 240 | 430 | 106 | 306 | 1.63e-101 | 305 |
| MS.gene33103.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 5.30e-17 | 82.0 |
| MS.gene33103.t1 | MTR_6g080420 | 37.963 | 432 | 254 | 6 | 5 | 428 | 89 | 514 | 5.19e-97 | 301 |
| MS.gene33103.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 43 | 470 | 8.11e-94 | 291 |
| MS.gene33103.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 49 | 476 | 9.12e-94 | 291 |
| MS.gene33103.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 70 | 497 | 2.46e-93 | 291 |
| MS.gene33103.t1 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 275 | 704 | 1.06e-91 | 292 |
| MS.gene33103.t1 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 348 | 777 | 5.28e-91 | 292 |
| MS.gene33103.t1 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 8.65e-90 | 274 |
| MS.gene33103.t1 | MTR_4g054970 | 57.025 | 242 | 75 | 4 | 193 | 431 | 50 | 265 | 3.11e-81 | 252 |
| MS.gene33103.t1 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 7.74e-13 | 68.9 |
| MS.gene33103.t1 | MTR_1g024165 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 1.42e-78 | 241 |
| MS.gene33103.t1 | MTR_8g014950 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 1.74e-47 | 159 |
| MS.gene33103.t1 | MTR_7g094460 | 30.365 | 438 | 245 | 14 | 3 | 429 | 59 | 447 | 1.36e-45 | 164 |
| MS.gene33103.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 8.88e-43 | 149 |
| MS.gene33103.t1 | MTR_2g021300 | 29.613 | 439 | 247 | 12 | 3 | 429 | 46 | 434 | 4.95e-42 | 154 |
| MS.gene33103.t1 | MTR_3g076660 | 29.955 | 444 | 250 | 15 | 3 | 429 | 88 | 487 | 7.17e-41 | 152 |
| MS.gene33103.t1 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 213 | 294 | 2 | 83 | 2.31e-28 | 110 |
| MS.gene33103.t1 | MTR_3g097250 | 26.471 | 272 | 143 | 9 | 9 | 272 | 85 | 307 | 1.53e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33103.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
| MS.gene33103.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
| MS.gene33103.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
| MS.gene33103.t1 | AT1G07920 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
| MS.gene33103.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
| MS.gene33103.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
| MS.gene33103.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
| MS.gene33103.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
| MS.gene33103.t1 | AT1G07930 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 881 |
| MS.gene33103.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
| MS.gene33103.t1 | AT1G07930 | 86.325 | 117 | 15 | 1 | 331 | 447 | 254 | 369 | 4.46e-64 | 211 |
| MS.gene33103.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.35e-94 | 294 |
| MS.gene33103.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.35e-94 | 294 |
| MS.gene33103.t1 | AT1G18070 | 36.927 | 436 | 256 | 6 | 5 | 424 | 99 | 531 | 3.41e-91 | 286 |
| MS.gene33103.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 1.02e-90 | 289 |
| MS.gene33103.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.05e-90 | 289 |
| MS.gene33103.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.05e-90 | 289 |
| MS.gene33103.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 5.91e-90 | 289 |
| MS.gene33103.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 6.36e-90 | 289 |
| MS.gene33103.t1 | AT1G35550 | 78.641 | 103 | 22 | 0 | 335 | 437 | 1 | 103 | 1.45e-53 | 174 |
| MS.gene33103.t1 | AT4G02930 | 30.296 | 439 | 245 | 15 | 3 | 429 | 63 | 452 | 7.48e-44 | 160 |
| MS.gene33103.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 9.49e-44 | 160 |
| MS.gene33103.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 9.49e-44 | 160 |
| MS.gene33103.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 3.08e-12 | 69.3 |
| MS.gene33103.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.86e-11 | 65.9 |
| MS.gene33103.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.92e-11 | 66.2 |
| MS.gene33103.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 3.76e-11 | 65.9 |
Find 135 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACCATTCTTCAAGAATT+TGG | 0.066665 | 1.1:-7289391 | None:intergenic |
| GTCTACAAGATTGGAGGAAT+TGG | 0.281818 | 1.1:+7288976 | MS.gene33103:CDS |
| GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 1.1:+7288568 | MS.gene33103:CDS |
| TTCATTAAGAACATGATTAC+TGG | 0.308905 | 1.1:+7288451 | MS.gene33103:CDS |
| TGTTAAGAACGTTGCTGTTA+AGG | 0.312399 | 1.1:+7289152 | MS.gene33103:CDS |
| GCCTCTTAGGCTCGTTGATT+TGG | 0.315296 | 1.1:-7288918 | None:intergenic |
| ACCAGTGGTGGTTGACTTCC+CGG | 0.329357 | 1.1:-7288212 | None:intergenic |
| CACATTAACATTGTTGTCAT+TGG | 0.329838 | 1.1:+7288178 | MS.gene33103:CDS |
| TCACCATTCTTCAAGAATTT+GGG | 0.331757 | 1.1:-7289390 | None:intergenic |
| ATAGCCAACCTTCTTCAAAT+AGG | 0.332380 | 1.1:-7288782 | None:intergenic |
| ACTAAGATTGACAGGCGTTC+TGG | 0.356033 | 1.1:+7289348 | MS.gene33103:CDS |
| GAGGTGTGGCAGTCAAGAAC+AGG | 0.357372 | 1.1:-7289294 | None:intergenic |
| GCTCTCACTGAGGCTCTTCC+CGG | 0.361996 | 1.1:+7289111 | MS.gene33103:CDS |
| ATTCCATTTGTTCCCATCTC+TGG | 0.368209 | 1.1:+7288817 | MS.gene33103:CDS |
| AAGTTAGCGGCCTCCTTGGC+AGG | 0.394061 | 1.1:-7289216 | None:intergenic |
| CTGATCATTGATTCCACTAC+TGG | 0.405045 | 1.1:+7288499 | MS.gene33103:CDS |
| CTCCTTGGCAGGGTCATCCT+TGG | 0.412873 | 1.1:-7289205 | None:intergenic |
| ATGAATCACCCTGGCCAGAT+TGG | 0.417716 | 1.1:+7289258 | MS.gene33103:CDS |
| GCAAAAGTGACAACCATTCC+AGG | 0.418006 | 1.1:-7289039 | None:intergenic |
| CCTGTGGGGCGTGTCGAGAC+TGG | 0.431830 | 1.1:+7289006 | MS.gene33103:CDS |
| GGCTTGTCTGATGGCCTCTT+AGG | 0.432559 | 1.1:-7288931 | None:intergenic |
| CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 1.1:+7289264 | MS.gene33103:CDS |
| GCCCCTCCGACTACCACTTC+AGG | 0.433104 | 1.1:+7288951 | MS.gene33103:CDS |
| AGGACAAATGGGTAAGGAAA+AGG | 0.440646 | 1.1:+7288153 | None:intergenic |
| GGGCATAGCCATTTCCAATC+TGG | 0.448022 | 1.1:-7289272 | None:intergenic |
| AAACCAGAGATGGGAACAAA+TGG | 0.449170 | 1.1:-7288820 | None:intergenic |
| CTGACCATCCTTTGAAATAC+CGG | 0.450328 | 1.1:-7288533 | None:intergenic |
| GTCATTGGCCATGTCGACTC+CGG | 0.454084 | 1.1:+7288193 | MS.gene33103:CDS |
| ACTTCAGTTGTCAGTCCAGT+AGG | 0.456008 | 1.1:-7289063 | None:intergenic |
| CTTCAGGATGTCTACAAGAT+TGG | 0.458119 | 1.1:+7288967 | MS.gene33103:CDS |
| AGCGTTCATTCAAGTATGCT+TGG | 0.461530 | 1.1:+7288311 | MS.gene33103:CDS |
| AGTCTCAACCACCATGGGCT+TGG | 0.462350 | 1.1:-7289439 | None:intergenic |
| AGGAATTGGGACTGTGCCTG+TGG | 0.463901 | 1.1:+7288990 | MS.gene33103:CDS |
| TCTACAAGATTGGAGGAATT+GGG | 0.467601 | 1.1:+7288977 | MS.gene33103:CDS |
| ACCAAATCAACGAGCCTAAG+AGG | 0.467614 | 1.1:+7288917 | MS.gene33103:CDS |
| CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 1.1:-7289436 | None:intergenic |
| TAGCCATTTCCAATCTGGCC+AGG | 0.474048 | 1.1:-7289267 | None:intergenic |
| TGCACTGTCATTGATGCCCC+TGG | 0.477178 | 1.1:+7288418 | MS.gene33103:CDS |
| TTAATGAAATCCCTGTGTCC+AGG | 0.479234 | 1.1:-7288436 | None:intergenic |
| TACCTACCCTTCGAGTACTT+TGG | 0.480160 | 1.1:-7288733 | None:intergenic |
| GCGTTCATTCAAGTATGCTT+GGG | 0.487854 | 1.1:+7288312 | MS.gene33103:CDS |
| TCATCCTATTTGAAGAAGGT+TGG | 0.491235 | 1.1:+7288778 | MS.gene33103:CDS |
| AGCAAATTTGACAGCAATGT+GGG | 0.494938 | 1.1:-7289316 | None:intergenic |
| AGTAAAGTTAGCGGCCTCCT+TGG | 0.495389 | 1.1:-7289220 | None:intergenic |
| AGTCGGAGGGGCTTGTCTGA+TGG | 0.496444 | 1.1:-7288940 | None:intergenic |
| ATCTCCCTCAAAACCAGAGA+TGG | 0.496573 | 1.1:-7288830 | None:intergenic |
| GGAATTGGGACTGTGCCTGT+GGG | 0.501531 | 1.1:+7288991 | MS.gene33103:CDS |
| AGTTTCATCCTATTTGAAGA+AGG | 0.501588 | 1.1:+7288774 | MS.gene33103:CDS |
| ATCATTGATTCCACTACTGG+TGG | 0.502099 | 1.1:+7288502 | MS.gene33103:CDS |
| TACAAATCTTGACTGGTACA+AGG | 0.502738 | 1.1:+7288870 | MS.gene33103:CDS |
| AGCTTGTTACTAAGATTGAC+AGG | 0.504274 | 1.1:+7289340 | MS.gene33103:CDS |
| CTTCAGTTGTCAGTCCAGTA+GGG | 0.506099 | 1.1:-7289062 | None:intergenic |
| ATTAAATCCCACATTGTCAC+CGG | 0.519224 | 1.1:-7289130 | None:intergenic |
| TCCGGGAAGTCAACCACCAC+TGG | 0.520912 | 1.1:+7288211 | MS.gene33103:CDS |
| AGGGTCATCCTTGGAGTTTG+AGG | 0.522734 | 1.1:-7289196 | None:intergenic |
| CAGGATGTCTACAAGATTGG+AGG | 0.523217 | 1.1:+7288970 | MS.gene33103:CDS |
| TCATTGGCCATGTCGACTCC+GGG | 0.523741 | 1.1:+7288194 | MS.gene33103:CDS |
| TAATGAAATCCCTGTGTCCA+GGG | 0.528272 | 1.1:-7288435 | None:intergenic |
| GAGCCCAAATTCTTGAAGAA+TGG | 0.528480 | 1.1:+7289387 | MS.gene33103:CDS |
| TTCTCTGAGTATCCTCCACT+TGG | 0.530256 | 1.1:+7289462 | MS.gene33103:CDS |
| TATCAAGGCTGTGGAGAAGA+AGG | 0.530959 | 1.1:+7289530 | MS.gene33103:CDS |
| CTCAAAGCTGAACGTGAAAG+AGG | 0.531334 | 1.1:+7288346 | MS.gene33103:CDS |
| CATTGATGCCCCTGGACACA+GGG | 0.535845 | 1.1:+7288426 | MS.gene33103:CDS |
| TCATTGATGCCCCTGGACAC+AGG | 0.539611 | 1.1:+7288425 | MS.gene33103:CDS |
| TGTGGCTGTTGGTGTTATCA+AGG | 0.541484 | 1.1:+7289515 | MS.gene33103:CDS |
| CTTCGAGTACTTTGGTGTAG+TGG | 0.545264 | 1.1:-7288725 | None:intergenic |
| CACTTGATCTACAAGCTTGG+AGG | 0.545798 | 1.1:+7288235 | MS.gene33103:CDS |
| GAGAAAGTCTCAACCACCAT+GGG | 0.549740 | 1.1:-7289444 | None:intergenic |
| GATTGACAGGCGTTCTGGAA+AGG | 0.550491 | 1.1:+7289353 | MS.gene33103:CDS |
| GGCTTCAAAACCACCAGTAG+TGG | 0.551737 | 1.1:-7288512 | None:intergenic |
| GGCTCTTCCCGGTGACAATG+TGG | 0.552654 | 1.1:+7289122 | MS.gene33103:CDS |
| GGTCACTTGATCTACAAGCT+TGG | 0.555547 | 1.1:+7288232 | MS.gene33103:CDS |
| CCAGTCTCGACACGCCCCAC+AGG | 0.557031 | 1.1:-7289006 | None:intergenic |
| TCAACCACCATGGGCTTGGT+GGG | 0.557624 | 1.1:-7289435 | None:intergenic |
| AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 1.1:-7288558 | None:intergenic |
| AGGTGTGGCAGTCAAGAACA+GGG | 0.559985 | 1.1:-7289293 | None:intergenic |
| CACTTGAGAAGTAAAGTTAG+CGG | 0.560708 | 1.1:-7289229 | None:intergenic |
| TTCTTGAAGAATGGTGATGC+TGG | 0.561159 | 1.1:+7289396 | MS.gene33103:CDS |
| TTGACAAGCGTGTGATTGAG+AGG | 0.564366 | 1.1:+7288260 | MS.gene33103:CDS |
| ACAAATCTTGACTGGTACAA+GGG | 0.566035 | 1.1:+7288871 | MS.gene33103:CDS |
| TTTGGTCAAGAGCCTCAAGA+AGG | 0.570297 | 1.1:-7288900 | None:intergenic |
| AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 1.1:-7288557 | None:intergenic |
| GAAGCCGGTATTTCAAAGGA+TGG | 0.572749 | 1.1:+7288529 | MS.gene33103:CDS |
| TTGACTTCCCGGAGTCGACA+TGG | 0.574810 | 1.1:-7288201 | None:intergenic |
| ATCCTGAAGTGGTAGTCGGA+GGG | 0.576252 | 1.1:-7288953 | None:intergenic |
| GAGACTGGTGTCATAAAACC+TGG | 0.585699 | 1.1:+7289021 | MS.gene33103:CDS |
| CAAGGGTCCTACCCTTCTTG+AGG | 0.587059 | 1.1:+7288888 | MS.gene33103:CDS |
| GCTCTTCCCGGTGACAATGT+GGG | 0.588610 | 1.1:+7289123 | MS.gene33103:CDS |
| GCATATCCCTGACAGCAAAA+CGG | 0.593078 | 1.1:-7289485 | None:intergenic |
| TGTTGGTGTTATCAAGGCTG+TGG | 0.597147 | 1.1:+7289521 | MS.gene33103:CDS |
| TAGGTATGATGAAATTGTGA+AGG | 0.599770 | 1.1:+7288750 | MS.gene33103:CDS |
| CACTACACCAAAGTACTCGA+AGG | 0.602464 | 1.1:+7288726 | MS.gene33103:CDS |
| ATGCGTCAAACTGTGGCTGT+TGG | 0.604242 | 1.1:+7289504 | MS.gene33103:CDS |
| TCTCCCTCAAAACCAGAGAT+GGG | 0.607478 | 1.1:-7288829 | None:intergenic |
| TCCTGAAGTGGTAGTCGGAG+GGG | 0.608492 | 1.1:-7288952 | None:intergenic |
| AGCGCTCTACAAATCTTGAC+TGG | 0.610562 | 1.1:+7288863 | MS.gene33103:CDS |
| GATGATTCCCACCAAGCCCA+TGG | 0.611182 | 1.1:+7289428 | MS.gene33103:CDS |
| GAATTGGGACTGTGCCTGTG+GGG | 0.615616 | 1.1:+7288992 | MS.gene33103:CDS |
| GACAACTGAAGTCAAGTCTG+TGG | 0.617234 | 1.1:+7289074 | MS.gene33103:CDS |
| CTCCAAGGATGACCCTGCCA+AGG | 0.619064 | 1.1:+7289203 | MS.gene33103:CDS |
| TCAAGAGCCTCAAGAAGGGT+AGG | 0.620041 | 1.1:-7288895 | None:intergenic |
| TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 1.1:-7288573 | None:intergenic |
| ATCTTGTAGACATCCTGAAG+TGG | 0.621388 | 1.1:-7288964 | None:intergenic |
| TTCAGTTGTCAGTCCAGTAG+GGG | 0.622733 | 1.1:-7289061 | None:intergenic |
| AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 1.1:-7289266 | None:intergenic |
| ACAGCAAAACGGCCAAGTGG+AGG | 0.624787 | 1.1:-7289474 | None:intergenic |
| TGGTGTCATAAAACCTGGAA+TGG | 0.625384 | 1.1:+7289026 | MS.gene33103:CDS |
| AGAGAAAGTCTCAACCACCA+TGG | 0.628507 | 1.1:-7289445 | None:intergenic |
| AATGATTTGTTGCTGCAACA+AGG | 0.628678 | 1.1:+7288600 | MS.gene33103:CDS |
| TTCTGGAAAGGAGATTGAGA+AGG | 0.629354 | 1.1:+7289365 | MS.gene33103:CDS |
| TTATGTTGCCTCAAACTCCA+AGG | 0.633897 | 1.1:+7289188 | MS.gene33103:CDS |
| AGTTAGCGGCCTCCTTGGCA+GGG | 0.634693 | 1.1:-7289215 | None:intergenic |
| CAAGGATGACCCTGCCAAGG+AGG | 0.636072 | 1.1:+7289206 | MS.gene33103:CDS |
| CATCCTGAAGTGGTAGTCGG+AGG | 0.637451 | 1.1:-7288954 | None:intergenic |
| AGACATCCTGAAGTGGTAGT+CGG | 0.638051 | 1.1:-7288957 | None:intergenic |
| CAGCAAATTTGACAGCAATG+TGG | 0.639349 | 1.1:-7289317 | None:intergenic |
| TTGGTCAAGAGCCTCAAGAA+GGG | 0.643393 | 1.1:-7288899 | None:intergenic |
| TGACAGCAATGTGGGAGGTG+TGG | 0.647495 | 1.1:-7289308 | None:intergenic |
| CACCAAAGTACTCGAAGGGT+AGG | 0.649681 | 1.1:+7288731 | MS.gene33103:CDS |
| AATGAAATCCCTGTGTCCAG+GGG | 0.656838 | 1.1:-7288434 | None:intergenic |
| GCTGTTAAGGATCTCAAGCG+TGG | 0.663761 | 1.1:+7289165 | MS.gene33103:CDS |
| TTAAATCCCACATTGTCACC+GGG | 0.665158 | 1.1:-7289129 | None:intergenic |
| ACTACACCAAAGTACTCGAA+GGG | 0.668068 | 1.1:+7288727 | MS.gene33103:CDS |
| CAGGGATATGCGTCAAACTG+TGG | 0.672188 | 1.1:+7289497 | MS.gene33103:CDS |
| GAGAAGAAGGATCCCAGCGG+AGG | 0.673598 | 1.1:+7289543 | MS.gene33103:CDS |
| AAATTTGACAGCAATGTGGG+AGG | 0.676474 | 1.1:-7289313 | None:intergenic |
| CTGACAGCAAAACGGCCAAG+TGG | 0.682401 | 1.1:-7289477 | None:intergenic |
| CTTGTAGATCAAGTGACCAG+TGG | 0.682705 | 1.1:-7288227 | None:intergenic |
| GTGATCATCATGAATCACCC+TGG | 0.684375 | 1.1:+7289249 | MS.gene33103:CDS |
| GTAGATCAAGTGACCAGTGG+TGG | 0.699002 | 1.1:-7288224 | None:intergenic |
| TCACAATTGACATTGCTCTG+TGG | 0.708352 | 1.1:+7288371 | MS.gene33103:CDS |
| GGTGTGGCAGTCAAGAACAG+GGG | 0.711459 | 1.1:-7289292 | None:intergenic |
| GATTCCCACCAAGCCCATGG+TGG | 0.723849 | 1.1:+7289431 | MS.gene33103:CDS |
| GCATCATGAAGCTCTCACTG+AGG | 0.742195 | 1.1:+7289101 | MS.gene33103:CDS |
| GTGGAGAAGAAGGATCCCAG+CGG | 0.769725 | 1.1:+7289540 | MS.gene33103:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATTACAATAATAATCAG+AGG | - | chr1.1:7288655-7288674 | None:intergenic | 20.0% |
| ! | TTCATTAAGAACATGATTAC+TGG | + | chr1.1:7288451-7288470 | MS.gene33103:CDS | 25.0% |
| AGTTTCATCCTATTTGAAGA+AGG | + | chr1.1:7288774-7288793 | MS.gene33103:CDS | 30.0% | |
| ATCACCATTCTTCAAGAATT+TGG | - | chr1.1:7289394-7289413 | None:intergenic | 30.0% | |
| CACATTAACATTGTTGTCAT+TGG | + | chr1.1:7288178-7288197 | MS.gene33103:CDS | 30.0% | |
| TAGGTATGATGAAATTGTGA+AGG | + | chr1.1:7288750-7288769 | MS.gene33103:CDS | 30.0% | |
| TCACCATTCTTCAAGAATTT+GGG | - | chr1.1:7289393-7289412 | None:intergenic | 30.0% | |
| ! | GAACAAATGGAATTTTGTCT+GGG | - | chr1.1:7288810-7288829 | None:intergenic | 30.0% |
| !! | TTTTTGCTATCTTGAACAGA+TGG | + | chr1.1:7288699-7288718 | MS.gene33103:intron | 30.0% |
| ACAAATCTTGACTGGTACAA+GGG | + | chr1.1:7288871-7288890 | MS.gene33103:CDS | 35.0% | |
| AGCAAATTTGACAGCAATGT+GGG | - | chr1.1:7289319-7289338 | None:intergenic | 35.0% | |
| ATAGCCAACCTTCTTCAAAT+AGG | - | chr1.1:7288785-7288804 | None:intergenic | 35.0% | |
| ATTAAATCCCACATTGTCAC+CGG | - | chr1.1:7289133-7289152 | None:intergenic | 35.0% | |
| CACTTGAGAAGTAAAGTTAG+CGG | - | chr1.1:7289232-7289251 | None:intergenic | 35.0% | |
| TACAAATCTTGACTGGTACA+AGG | + | chr1.1:7288870-7288889 | MS.gene33103:CDS | 35.0% | |
| TCATCCTATTTGAAGAAGGT+TGG | + | chr1.1:7288778-7288797 | MS.gene33103:CDS | 35.0% | |
| TCTACAAGATTGGAGGAATT+GGG | + | chr1.1:7288977-7288996 | MS.gene33103:CDS | 35.0% | |
| ! | GGAACAAATGGAATTTTGTC+TGG | - | chr1.1:7288811-7288830 | None:intergenic | 35.0% |
| ! | TGTTAAGAACGTTGCTGTTA+AGG | + | chr1.1:7289152-7289171 | MS.gene33103:CDS | 35.0% |
| !! | AATGATTTGTTGCTGCAACA+AGG | + | chr1.1:7288600-7288619 | MS.gene33103:CDS | 35.0% |
| !! | AGCTTGTTACTAAGATTGAC+AGG | + | chr1.1:7289340-7289359 | MS.gene33103:CDS | 35.0% |
| !!! | TTTTGAAGCCGGTATTTCAA+AGG | + | chr1.1:7288525-7288544 | MS.gene33103:CDS | 35.0% |
| AAACCAGAGATGGGAACAAA+TGG | - | chr1.1:7288823-7288842 | None:intergenic | 40.0% | |
| AAATTTGACAGCAATGTGGG+AGG | - | chr1.1:7289316-7289335 | None:intergenic | 40.0% | |
| AGCGTTCATTCAAGTATGCT+TGG | + | chr1.1:7288311-7288330 | MS.gene33103:CDS | 40.0% | |
| ATCTTGTAGACATCCTGAAG+TGG | - | chr1.1:7288967-7288986 | None:intergenic | 40.0% | |
| ATTCCATTTGTTCCCATCTC+TGG | + | chr1.1:7288817-7288836 | MS.gene33103:CDS | 40.0% | |
| CAGCAAATTTGACAGCAATG+TGG | - | chr1.1:7289320-7289339 | None:intergenic | 40.0% | |
| CTTCAGGATGTCTACAAGAT+TGG | + | chr1.1:7288967-7288986 | MS.gene33103:CDS | 40.0% | |
| GAGCCCAAATTCTTGAAGAA+TGG | + | chr1.1:7289387-7289406 | MS.gene33103:CDS | 40.0% | |
| GCGTTCATTCAAGTATGCTT+GGG | + | chr1.1:7288312-7288331 | MS.gene33103:CDS | 40.0% | |
| GTCTACAAGATTGGAGGAAT+TGG | + | chr1.1:7288976-7288995 | MS.gene33103:CDS | 40.0% | |
| TAATGAAATCCCTGTGTCCA+GGG | - | chr1.1:7288438-7288457 | None:intergenic | 40.0% | |
| TCACAATTGACATTGCTCTG+TGG | + | chr1.1:7288371-7288390 | MS.gene33103:CDS | 40.0% | |
| TTAAATCCCACATTGTCACC+GGG | - | chr1.1:7289132-7289151 | None:intergenic | 40.0% | |
| TTAATGAAATCCCTGTGTCC+AGG | - | chr1.1:7288439-7288458 | None:intergenic | 40.0% | |
| TTATGTTGCCTCAAACTCCA+AGG | + | chr1.1:7289188-7289207 | MS.gene33103:CDS | 40.0% | |
| ! | ACTACACCAAAGTACTCGAA+GGG | + | chr1.1:7288727-7288746 | MS.gene33103:CDS | 40.0% |
| ! | TTCTGGAAAGGAGATTGAGA+AGG | + | chr1.1:7289365-7289384 | MS.gene33103:CDS | 40.0% |
| ! | TTCTTGAAGAATGGTGATGC+TGG | + | chr1.1:7289396-7289415 | MS.gene33103:CDS | 40.0% |
| !! | ATAATCAGAGGCACCTTCAA+AGG | - | chr1.1:7288643-7288662 | None:intergenic | 40.0% |
| !! | ATCATTGATTCCACTACTGG+TGG | + | chr1.1:7288502-7288521 | MS.gene33103:CDS | 40.0% |
| !! | CTGACCATCCTTTGAAATAC+CGG | - | chr1.1:7288536-7288555 | None:intergenic | 40.0% |
| !! | CTGATCATTGATTCCACTAC+TGG | + | chr1.1:7288499-7288518 | MS.gene33103:CDS | 40.0% |
| !! | GTTTTATTAAGTCCTCCGCT+GGG | - | chr1.1:7289558-7289577 | None:intergenic | 40.0% |
| !! | TAATCAGAGGCACCTTCAAA+GGG | - | chr1.1:7288642-7288661 | None:intergenic | 40.0% |
| !! | TGAACGTTTTAGCCCTTTGA+AGG | + | chr1.1:7288627-7288646 | MS.gene33103:intron | 40.0% |
| !! | TGGTGTCATAAAACCTGGAA+TGG | + | chr1.1:7289026-7289045 | MS.gene33103:CDS | 40.0% |
| !! | TGTTTTATTAAGTCCTCCGC+TGG | - | chr1.1:7289559-7289578 | None:intergenic | 40.0% |
| AATGAAATCCCTGTGTCCAG+GGG | - | chr1.1:7288437-7288456 | None:intergenic | 45.0% | |
| ACCAAATCAACGAGCCTAAG+AGG | + | chr1.1:7288917-7288936 | MS.gene33103:CDS | 45.0% | |
| ACTAAGATTGACAGGCGTTC+TGG | + | chr1.1:7289348-7289367 | MS.gene33103:CDS | 45.0% | |
| ACTTCAGTTGTCAGTCCAGT+AGG | - | chr1.1:7289066-7289085 | None:intergenic | 45.0% | |
| AGACATCCTGAAGTGGTAGT+CGG | - | chr1.1:7288960-7288979 | None:intergenic | 45.0% | |
| AGAGAAAGTCTCAACCACCA+TGG | - | chr1.1:7289448-7289467 | None:intergenic | 45.0% | |
| AGCGCTCTACAAATCTTGAC+TGG | + | chr1.1:7288863-7288882 | MS.gene33103:CDS | 45.0% | |
| ATCTCCCTCAAAACCAGAGA+TGG | - | chr1.1:7288833-7288852 | None:intergenic | 45.0% | |
| CACTTGATCTACAAGCTTGG+AGG | + | chr1.1:7288235-7288254 | MS.gene33103:CDS | 45.0% | |
| CAGGATGTCTACAAGATTGG+AGG | + | chr1.1:7288970-7288989 | MS.gene33103:CDS | 45.0% | |
| CTCAAAGCTGAACGTGAAAG+AGG | + | chr1.1:7288346-7288365 | MS.gene33103:CDS | 45.0% | |
| CTTCAGTTGTCAGTCCAGTA+GGG | - | chr1.1:7289065-7289084 | None:intergenic | 45.0% | |
| CTTGTAGATCAAGTGACCAG+TGG | - | chr1.1:7288230-7288249 | None:intergenic | 45.0% | |
| GAAGCCGGTATTTCAAAGGA+TGG | + | chr1.1:7288529-7288548 | MS.gene33103:CDS | 45.0% | |
| GACAACTGAAGTCAAGTCTG+TGG | + | chr1.1:7289074-7289093 | MS.gene33103:CDS | 45.0% | |
| GAGAAAGTCTCAACCACCAT+GGG | - | chr1.1:7289447-7289466 | None:intergenic | 45.0% | |
| GCAAAAGTGACAACCATTCC+AGG | - | chr1.1:7289042-7289061 | None:intergenic | 45.0% | |
| GCATATCCCTGACAGCAAAA+CGG | - | chr1.1:7289488-7289507 | None:intergenic | 45.0% | |
| GGTCACTTGATCTACAAGCT+TGG | + | chr1.1:7288232-7288251 | MS.gene33103:CDS | 45.0% | |
| GTGATCATCATGAATCACCC+TGG | + | chr1.1:7289249-7289268 | MS.gene33103:CDS | 45.0% | |
| TACCTACCCTTCGAGTACTT+TGG | - | chr1.1:7288736-7288755 | None:intergenic | 45.0% | |
| TATCAAGGCTGTGGAGAAGA+AGG | + | chr1.1:7289530-7289549 | MS.gene33103:CDS | 45.0% | |
| TCACACCAAGAGTGAAAGCA+AGG | - | chr1.1:7288576-7288595 | None:intergenic | 45.0% | |
| TCTCCCTCAAAACCAGAGAT+GGG | - | chr1.1:7288832-7288851 | None:intergenic | 45.0% | |
| TTCAGTTGTCAGTCCAGTAG+GGG | - | chr1.1:7289064-7289083 | None:intergenic | 45.0% | |
| TTCTCTGAGTATCCTCCACT+TGG | + | chr1.1:7289462-7289481 | MS.gene33103:CDS | 45.0% | |
| TTGACAAGCGTGTGATTGAG+AGG | + | chr1.1:7288260-7288279 | MS.gene33103:CDS | 45.0% | |
| TTGGTCAAGAGCCTCAAGAA+GGG | - | chr1.1:7288902-7288921 | None:intergenic | 45.0% | |
| TTTGGTCAAGAGCCTCAAGA+AGG | - | chr1.1:7288903-7288922 | None:intergenic | 45.0% | |
| ! | AAGCAAGGAGAGCATGTTCA+CGG | - | chr1.1:7288561-7288580 | None:intergenic | 45.0% |
| ! | CACTACACCAAAGTACTCGA+AGG | + | chr1.1:7288726-7288745 | MS.gene33103:CDS | 45.0% |
| ! | CTTCGAGTACTTTGGTGTAG+TGG | - | chr1.1:7288728-7288747 | None:intergenic | 45.0% |
| !! | GAGACTGGTGTCATAAAACC+TGG | + | chr1.1:7289021-7289040 | MS.gene33103:CDS | 45.0% |
| !! | TGTGGCTGTTGGTGTTATCA+AGG | + | chr1.1:7289515-7289534 | MS.gene33103:CDS | 45.0% |
| !! | TGTTGGTGTTATCAAGGCTG+TGG | + | chr1.1:7289521-7289540 | MS.gene33103:CDS | 45.0% |
| !!! | ACTACTGGTGGTTTTGAAGC+CGG | + | chr1.1:7288514-7288533 | MS.gene33103:CDS | 45.0% |
| !!! | GTTCCCATCTCTGGTTTTGA+GGG | + | chr1.1:7288826-7288845 | MS.gene33103:CDS | 45.0% |
| !!! | TGTTCCCATCTCTGGTTTTG+AGG | + | chr1.1:7288825-7288844 | MS.gene33103:CDS | 45.0% |
| AGCCATTTCCAATCTGGCCA+GGG | - | chr1.1:7289269-7289288 | None:intergenic | 50.0% | |
| AGGGTCATCCTTGGAGTTTG+AGG | - | chr1.1:7289199-7289218 | None:intergenic | 50.0% | |
| AGGTGTGGCAGTCAAGAACA+GGG | - | chr1.1:7289296-7289315 | None:intergenic | 50.0% | |
| AGTAAAGTTAGCGGCCTCCT+TGG | - | chr1.1:7289223-7289242 | None:intergenic | 50.0% | |
| ATCCTGAAGTGGTAGTCGGA+GGG | - | chr1.1:7288956-7288975 | None:intergenic | 50.0% | |
| ATGAATCACCCTGGCCAGAT+TGG | + | chr1.1:7289258-7289277 | MS.gene33103:CDS | 50.0% | |
| ATGCGTCAAACTGTGGCTGT+TGG | + | chr1.1:7289504-7289523 | MS.gene33103:CDS | 50.0% | |
| CAGGGATATGCGTCAAACTG+TGG | + | chr1.1:7289497-7289516 | MS.gene33103:CDS | 50.0% | |
| GCATCATGAAGCTCTCACTG+AGG | + | chr1.1:7289101-7289120 | MS.gene33103:CDS | 50.0% | |
| GCTCTCCTTGCTTTCACTCT+TGG | + | chr1.1:7288568-7288587 | MS.gene33103:CDS | 50.0% | |
| GCTGTTAAGGATCTCAAGCG+TGG | + | chr1.1:7289165-7289184 | MS.gene33103:CDS | 50.0% | |
| GGCTTCAAAACCACCAGTAG+TGG | - | chr1.1:7288515-7288534 | None:intergenic | 50.0% | |
| GGGCATAGCCATTTCCAATC+TGG | - | chr1.1:7289275-7289294 | None:intergenic | 50.0% | |
| GTAGATCAAGTGACCAGTGG+TGG | - | chr1.1:7288227-7288246 | None:intergenic | 50.0% | |
| TAGCCATTTCCAATCTGGCC+AGG | - | chr1.1:7289270-7289289 | None:intergenic | 50.0% | |
| TCAAGAGCCTCAAGAAGGGT+AGG | - | chr1.1:7288898-7288917 | None:intergenic | 50.0% | |
| ! | AGCAAGGAGAGCATGTTCAC+GGG | - | chr1.1:7288560-7288579 | None:intergenic | 50.0% |
| ! | CACCAAAGTACTCGAAGGGT+AGG | + | chr1.1:7288731-7288750 | MS.gene33103:CDS | 50.0% |
| ! | GCCTCTTAGGCTCGTTGATT+TGG | - | chr1.1:7288921-7288940 | None:intergenic | 50.0% |
| !! | ACTTGGCCGTTTTGCTGTCA+GGG | + | chr1.1:7289479-7289498 | MS.gene33103:CDS | 50.0% |
| !! | GATTGACAGGCGTTCTGGAA+AGG | + | chr1.1:7289353-7289372 | MS.gene33103:CDS | 50.0% |
| !!! | GTTGTCACTTTTGCCCCTAC+TGG | + | chr1.1:7289048-7289067 | MS.gene33103:CDS | 50.0% |
| ACAGCAAAACGGCCAAGTGG+AGG | - | chr1.1:7289477-7289496 | None:intergenic | 55.0% | |
| AGGAATTGGGACTGTGCCTG+TGG | + | chr1.1:7288990-7289009 | MS.gene33103:CDS | 55.0% | |
| AGTCTCAACCACCATGGGCT+TGG | - | chr1.1:7289442-7289461 | None:intergenic | 55.0% | |
| CAAGGGTCCTACCCTTCTTG+AGG | + | chr1.1:7288888-7288907 | MS.gene33103:CDS | 55.0% | |
| CACCCTGGCCAGATTGGAAA+TGG | + | chr1.1:7289264-7289283 | MS.gene33103:CDS | 55.0% | |
| CATCCTGAAGTGGTAGTCGG+AGG | - | chr1.1:7288957-7288976 | None:intergenic | 55.0% | |
| CATTGATGCCCCTGGACACA+GGG | + | chr1.1:7288426-7288445 | MS.gene33103:CDS | 55.0% | |
| CTGACAGCAAAACGGCCAAG+TGG | - | chr1.1:7289480-7289499 | None:intergenic | 55.0% | |
| GAATTGGGACTGTGCCTGTG+GGG | + | chr1.1:7288992-7289011 | MS.gene33103:CDS | 55.0% | |
| GAGGTGTGGCAGTCAAGAAC+AGG | - | chr1.1:7289297-7289316 | None:intergenic | 55.0% | |
| GATGATTCCCACCAAGCCCA+TGG | + | chr1.1:7289428-7289447 | MS.gene33103:CDS | 55.0% | |
| GCTCTTCCCGGTGACAATGT+GGG | + | chr1.1:7289123-7289142 | MS.gene33103:CDS | 55.0% | |
| GGAATTGGGACTGTGCCTGT+GGG | + | chr1.1:7288991-7289010 | MS.gene33103:CDS | 55.0% | |
| GGCTTGTCTGATGGCCTCTT+AGG | - | chr1.1:7288934-7288953 | None:intergenic | 55.0% | |
| GGTGTGGCAGTCAAGAACAG+GGG | - | chr1.1:7289295-7289314 | None:intergenic | 55.0% | |
| GTGGAGAAGAAGGATCCCAG+CGG | + | chr1.1:7289540-7289559 | MS.gene33103:CDS | 55.0% | |
| TCATTGATGCCCCTGGACAC+AGG | + | chr1.1:7288425-7288444 | MS.gene33103:CDS | 55.0% | |
| TCCTGAAGTGGTAGTCGGAG+GGG | - | chr1.1:7288955-7288974 | None:intergenic | 55.0% | |
| TGACAGCAATGTGGGAGGTG+TGG | - | chr1.1:7289311-7289330 | None:intergenic | 55.0% | |
| TGCACTGTCATTGATGCCCC+TGG | + | chr1.1:7288418-7288437 | MS.gene33103:CDS | 55.0% | |
| TTGACTTCCCGGAGTCGACA+TGG | - | chr1.1:7288204-7288223 | None:intergenic | 55.0% | |
| ! | ACCAGTGGTGGTTGACTTCC+CGG | - | chr1.1:7288215-7288234 | None:intergenic | 55.0% |
| ! | TCAACCACCATGGGCTTGGT+GGG | - | chr1.1:7289438-7289457 | None:intergenic | 55.0% |
| !! | CACTTGGCCGTTTTGCTGTC+AGG | + | chr1.1:7289478-7289497 | MS.gene33103:CDS | 55.0% |
| !! | GTCATTGGCCATGTCGACTC+CGG | + | chr1.1:7288193-7288212 | MS.gene33103:CDS | 55.0% |
| !! | TCATTGGCCATGTCGACTCC+GGG | + | chr1.1:7288194-7288213 | MS.gene33103:CDS | 55.0% |
| AAGTTAGCGGCCTCCTTGGC+AGG | - | chr1.1:7289219-7289238 | None:intergenic | 60.0% | |
| AGTCGGAGGGGCTTGTCTGA+TGG | - | chr1.1:7288943-7288962 | None:intergenic | 60.0% | |
| AGTTAGCGGCCTCCTTGGCA+GGG | - | chr1.1:7289218-7289237 | None:intergenic | 60.0% | |
| CAAGGATGACCCTGCCAAGG+AGG | + | chr1.1:7289206-7289225 | MS.gene33103:CDS | 60.0% | |
| CTCAACCACCATGGGCTTGG+TGG | - | chr1.1:7289439-7289458 | None:intergenic | 60.0% | |
| CTCCAAGGATGACCCTGCCA+AGG | + | chr1.1:7289203-7289222 | MS.gene33103:CDS | 60.0% | |
| CTCCTTGGCAGGGTCATCCT+TGG | - | chr1.1:7289208-7289227 | None:intergenic | 60.0% | |
| GAGAAGAAGGATCCCAGCGG+AGG | + | chr1.1:7289543-7289562 | MS.gene33103:CDS | 60.0% | |
| GATTCCCACCAAGCCCATGG+TGG | + | chr1.1:7289431-7289450 | MS.gene33103:CDS | 60.0% | |
| GCTCTCACTGAGGCTCTTCC+CGG | + | chr1.1:7289111-7289130 | MS.gene33103:CDS | 60.0% | |
| GGCTCTTCCCGGTGACAATG+TGG | + | chr1.1:7289122-7289141 | MS.gene33103:CDS | 60.0% | |
| TCCGGGAAGTCAACCACCAC+TGG | + | chr1.1:7288211-7288230 | MS.gene33103:CDS | 60.0% | |
| GCCCCTCCGACTACCACTTC+AGG | + | chr1.1:7288951-7288970 | MS.gene33103:CDS | 65.0% | |
| CCAGTCTCGACACGCCCCAC+AGG | - | chr1.1:7289009-7289028 | None:intergenic | 70.0% | |
| CCTGTGGGGCGTGTCGAGAC+TGG | + | chr1.1:7289006-7289025 | MS.gene33103:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 7288160 | 7289602 | 7288160 | ID=MS.gene33103 |
| chr1.1 | mRNA | 7288160 | 7289602 | 7288160 | ID=MS.gene33103.t1;Parent=MS.gene33103 |
| chr1.1 | exon | 7288160 | 7288621 | 7288160 | ID=MS.gene33103.t1.exon1;Parent=MS.gene33103.t1 |
| chr1.1 | CDS | 7288160 | 7288621 | 7288160 | ID=cds.MS.gene33103.t1;Parent=MS.gene33103.t1 |
| chr1.1 | exon | 7288718 | 7289602 | 7288718 | ID=MS.gene33103.t1.exon2;Parent=MS.gene33103.t1 |
| chr1.1 | CDS | 7288718 | 7289602 | 7288718 | ID=cds.MS.gene33103.t1;Parent=MS.gene33103.t1 |
| Gene Sequence |
| Protein sequence |