Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47051.t1 | XP_003618775.2 | 100 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 1.70E-258 | 901.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47051.t1 | O64937 | 96.9 | 447 | 14 | 0 | 1 | 447 | 1 | 447 | 1.2e-255 | 883.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47051.t1 | G7KN61 | 100.0 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 1.2e-258 | 901.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47051.t1 | MTR_6g021800 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
MS.gene47051.t1 | MTR_6g021805 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
MS.gene47051.t1 | MTR_1g495705 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
MS.gene47051.t1 | MTR_1g095650 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
MS.gene47051.t1 | MTR_1g095703 | 96.429 | 448 | 15 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
MS.gene47051.t1 | MTR_4g014810 | 95.302 | 447 | 21 | 0 | 1 | 447 | 1 | 447 | 0.0 | 891 |
MS.gene47051.t1 | MTR_1g013680 | 95.227 | 440 | 18 | 1 | 1 | 437 | 1 | 440 | 0.0 | 865 |
MS.gene47051.t1 | MTR_1g085410 | 81.336 | 434 | 81 | 0 | 1 | 434 | 1 | 434 | 0.0 | 739 |
MS.gene47051.t1 | MTR_1g101870 | 80.182 | 439 | 82 | 3 | 1 | 439 | 1 | 434 | 0.0 | 726 |
MS.gene47051.t1 | MTR_1g101870 | 80.182 | 439 | 82 | 3 | 1 | 439 | 1 | 434 | 0.0 | 724 |
MS.gene47051.t1 | MTR_1g024175 | 78.802 | 434 | 92 | 0 | 1 | 434 | 1 | 434 | 0.0 | 724 |
MS.gene47051.t1 | MTR_8g014590 | 77.951 | 449 | 96 | 2 | 1 | 446 | 1 | 449 | 0.0 | 713 |
MS.gene47051.t1 | MTR_1g095650 | 95.965 | 347 | 13 | 1 | 102 | 447 | 1 | 347 | 0.0 | 688 |
MS.gene47051.t1 | MTR_2g082730 | 70.682 | 440 | 112 | 2 | 1 | 438 | 1 | 425 | 0.0 | 639 |
MS.gene47051.t1 | MTR_5g037350 | 66.383 | 470 | 121 | 1 | 3 | 435 | 13 | 482 | 0.0 | 629 |
MS.gene47051.t1 | MTR_1g089520 | 69.406 | 438 | 116 | 3 | 4 | 440 | 5 | 425 | 0.0 | 623 |
MS.gene47051.t1 | MTR_2g082665 | 65.682 | 440 | 108 | 2 | 1 | 438 | 1 | 399 | 0.0 | 581 |
MS.gene47051.t1 | MTR_2g037420 | 63.053 | 452 | 121 | 4 | 1 | 447 | 1 | 411 | 0.0 | 558 |
MS.gene47051.t1 | MTR_2g080210 | 64.368 | 435 | 119 | 4 | 1 | 432 | 1 | 402 | 0.0 | 549 |
MS.gene47051.t1 | MTR_8g013910 | 63.029 | 449 | 131 | 5 | 1 | 433 | 1 | 430 | 0.0 | 546 |
MS.gene47051.t1 | MTR_8g008740 | 78.154 | 325 | 70 | 1 | 1 | 324 | 1 | 325 | 0.0 | 538 |
MS.gene47051.t1 | MTR_1g112460 | 64.094 | 298 | 65 | 4 | 155 | 446 | 1 | 262 | 3.93e-124 | 362 |
MS.gene47051.t1 | MTR_1g495735 | 74.129 | 201 | 42 | 1 | 240 | 430 | 106 | 306 | 3.35e-99 | 299 |
MS.gene47051.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 4.80e-17 | 82.0 |
MS.gene47051.t1 | MTR_6g080420 | 37.731 | 432 | 255 | 6 | 5 | 428 | 89 | 514 | 1.21e-96 | 300 |
MS.gene47051.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 49 | 476 | 1.45e-93 | 291 |
MS.gene47051.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 43 | 470 | 2.18e-93 | 290 |
MS.gene47051.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 70 | 497 | 4.03e-93 | 290 |
MS.gene47051.t1 | MTR_8g087950 | 35.566 | 433 | 270 | 6 | 7 | 433 | 275 | 704 | 2.05e-90 | 289 |
MS.gene47051.t1 | MTR_8g087950 | 35.566 | 433 | 270 | 6 | 7 | 433 | 348 | 777 | 1.09e-89 | 289 |
MS.gene47051.t1 | MTR_1g101880 | 86.364 | 154 | 21 | 0 | 1 | 154 | 1 | 154 | 1.19e-89 | 273 |
MS.gene47051.t1 | MTR_4g054970 | 55.372 | 242 | 79 | 4 | 193 | 431 | 50 | 265 | 2.03e-79 | 248 |
MS.gene47051.t1 | MTR_4g054970 | 77.273 | 44 | 10 | 0 | 1 | 44 | 1 | 44 | 4.58e-13 | 69.7 |
MS.gene47051.t1 | MTR_1g024165 | 81.884 | 138 | 25 | 0 | 8 | 145 | 12 | 149 | 1.95e-78 | 240 |
MS.gene47051.t1 | MTR_8g014950 | 75.490 | 102 | 25 | 0 | 3 | 104 | 4 | 105 | 2.57e-47 | 158 |
MS.gene47051.t1 | MTR_7g094460 | 30.227 | 440 | 243 | 14 | 3 | 429 | 59 | 447 | 1.67e-45 | 164 |
MS.gene47051.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 1.17e-42 | 149 |
MS.gene47051.t1 | MTR_3g076660 | 30.631 | 444 | 247 | 15 | 3 | 429 | 88 | 487 | 5.23e-42 | 155 |
MS.gene47051.t1 | MTR_2g021300 | 29.385 | 439 | 248 | 12 | 3 | 429 | 46 | 434 | 1.09e-41 | 153 |
MS.gene47051.t1 | MTR_8g014960 | 62.195 | 82 | 31 | 0 | 213 | 294 | 2 | 83 | 2.88e-27 | 107 |
MS.gene47051.t1 | MTR_3g097250 | 26.103 | 272 | 144 | 9 | 9 | 272 | 85 | 307 | 2.92e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47051.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene47051.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene47051.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene47051.t1 | AT1G07920 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene47051.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene47051.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene47051.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene47051.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene47051.t1 | AT1G07930 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene47051.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
MS.gene47051.t1 | AT1G07930 | 90.517 | 116 | 11 | 0 | 331 | 446 | 254 | 369 | 1.79e-68 | 223 |
MS.gene47051.t1 | AT1G18070 | 37.412 | 425 | 258 | 5 | 5 | 424 | 99 | 520 | 6.59e-94 | 293 |
MS.gene47051.t1 | AT1G18070 | 37.412 | 425 | 258 | 5 | 5 | 424 | 99 | 520 | 6.59e-94 | 293 |
MS.gene47051.t1 | AT1G18070 | 36.697 | 436 | 257 | 6 | 5 | 424 | 99 | 531 | 1.04e-90 | 285 |
MS.gene47051.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 1.84e-90 | 288 |
MS.gene47051.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.88e-90 | 288 |
MS.gene47051.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.88e-90 | 288 |
MS.gene47051.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 9.81e-90 | 288 |
MS.gene47051.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 1.10e-89 | 288 |
MS.gene47051.t1 | AT1G35550 | 77.885 | 104 | 23 | 0 | 335 | 438 | 1 | 104 | 5.60e-54 | 176 |
MS.gene47051.t1 | AT4G20360 | 30.594 | 438 | 255 | 10 | 3 | 429 | 75 | 474 | 1.27e-44 | 162 |
MS.gene47051.t1 | AT4G20360 | 30.594 | 438 | 255 | 10 | 3 | 429 | 75 | 474 | 1.27e-44 | 162 |
MS.gene47051.t1 | AT4G02930 | 29.977 | 437 | 249 | 13 | 3 | 429 | 63 | 452 | 2.02e-44 | 161 |
MS.gene47051.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 1.60e-12 | 70.1 |
MS.gene47051.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 2.25e-11 | 66.6 |
MS.gene47051.t1 | AT5G08650 | 27.037 | 270 | 144 | 10 | 9 | 272 | 88 | 310 | 2.46e-11 | 66.2 |
MS.gene47051.t1 | AT5G08650 | 27.037 | 270 | 144 | 10 | 9 | 272 | 88 | 310 | 2.73e-11 | 66.2 |
Find 137 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCGGTATGGTTGTGACTTT+TGG | 0.190241 | 6.3:+15175550 | MS.gene47051:CDS |
CTTCTTCTTGGCAGCAGCTT+TGG | 0.247525 | 6.3:-15176085 | None:intergenic |
GGGCTTGTCTGTGGGTCTCT+TGG | 0.253944 | 6.3:-15175443 | None:intergenic |
GGCTTGTCTGTGGGTCTCTT+GGG | 0.287757 | 6.3:-15175442 | None:intergenic |
GGTGTGAGATCACTTCTTCT+TGG | 0.342859 | 6.3:-15176097 | None:intergenic |
GCTCTCACTGAAGCTCTTCC+AGG | 0.343392 | 6.3:+15175622 | MS.gene47051:CDS |
TTGCAAGATGTTTACAAGAT+TGG | 0.346171 | 6.3:+15175478 | MS.gene47051:CDS |
GTCTCTTGGGCTCGTTGATC+TGG | 0.347889 | 6.3:-15175429 | None:intergenic |
TTCATCAAGAACATGATTAC+TGG | 0.350652 | 6.3:+15174962 | MS.gene47051:CDS |
CATATCAACATTGTCGTCAT+TGG | 0.354281 | 6.3:+15174689 | MS.gene47051:CDS |
ATCACCATTCTTCAAGAACT+TGG | 0.354818 | 6.3:-15175902 | None:intergenic |
GGCAGCAGCTTTGGTGACTT+TGG | 0.372842 | 6.3:-15176076 | None:intergenic |
ACCTAGCCTTCGAGTACTTA+GGG | 0.375441 | 6.3:-15175243 | None:intergenic |
AAGTTGGCAGCTTCCTTGGC+AGG | 0.382611 | 6.3:-15175727 | None:intergenic |
GTTTACAAGATTGGTGGTAT+TGG | 0.392142 | 6.3:+15175487 | MS.gene47051:CDS |
AGTGAAGTTGGCAGCTTCCT+TGG | 0.410082 | 6.3:-15175731 | None:intergenic |
CATCTTGCAATGGAAGCCTT+AGG | 0.410801 | 6.3:-15175465 | None:intergenic |
ACCAGATCGCCTGTCAATCT+TGG | 0.419719 | 6.3:-15175860 | None:intergenic |
TTCCTTGGCAGGGTCATCCT+TGG | 0.427055 | 6.3:-15175716 | None:intergenic |
GTTCCCATCTCCGGATTTGA+AGG | 0.431146 | 6.3:+15175337 | MS.gene47051:CDS |
ATCTTGCAATGGAAGCCTTA+GGG | 0.434928 | 6.3:-15175464 | None:intergenic |
TCTGGAAAATCAACAACAAC+TGG | 0.436226 | 6.3:+15174722 | MS.gene47051:CDS |
AAGCCTTAGGGGCTTGTCTG+TGG | 0.440142 | 6.3:-15175452 | None:intergenic |
ATGGGTTCTTGACAAACTTA+AGG | 0.442151 | 6.3:+15174841 | MS.gene47051:CDS |
CATGTTGTCACCTTCAAATC+CGG | 0.442623 | 6.3:-15175347 | None:intergenic |
ATTCCCTTCGTTCCCATCTC+CGG | 0.450165 | 6.3:+15175328 | MS.gene47051:CDS |
GGCAGGGTCATCCTTGGAGT+TGG | 0.452433 | 6.3:-15175710 | None:intergenic |
ATGAACCACCCTGGTCAGAT+TGG | 0.454810 | 6.3:+15175769 | MS.gene47051:CDS |
GGTCTCAACCACCATGGGCT+TGG | 0.458699 | 6.3:-15175950 | None:intergenic |
CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 6.3:-15175947 | None:intergenic |
TAAGGACTGCACAATCAGCC+TGG | 0.473376 | 6.3:-15174991 | None:intergenic |
TTTGGTGACTTTGGCTCCAG+TGG | 0.473646 | 6.3:-15176067 | None:intergenic |
ACCAAGATTGACAGGCGATC+TGG | 0.474566 | 6.3:+15175859 | MS.gene47051:CDS |
CAAGATGTTTACAAGATTGG+TGG | 0.475647 | 6.3:+15175481 | MS.gene47051:CDS |
TGCACAGTCATTGATGCTCC+TGG | 0.479590 | 6.3:+15174929 | MS.gene47051:CDS |
AGCCTTAGGGGCTTGTCTGT+GGG | 0.482400 | 6.3:-15175451 | None:intergenic |
CTTAAGGCTGAGCGTGAAAG+AGG | 0.490014 | 6.3:+15174857 | MS.gene47051:CDS |
GTCATTGGACATGTCGACTC+TGG | 0.490675 | 6.3:+15174704 | MS.gene47051:CDS |
GTCACCTTCAAATCCGGAGA+TGG | 0.495769 | 6.3:-15175341 | None:intergenic |
TCATCATACTTGAAGAAGGT+TGG | 0.496066 | 6.3:+15175289 | MS.gene47051:CDS |
TCCAAAAGTCACAACCATAC+CGG | 0.497778 | 6.3:-15175551 | None:intergenic |
CATCAAGGCTGTGGAGAAGA+AGG | 0.501366 | 6.3:+15176041 | MS.gene47051:CDS |
AGTTTCATCATACTTGAAGA+AGG | 0.501588 | 6.3:+15175285 | MS.gene47051:CDS |
CACCAACCTTGACTGGTACA+AGG | 0.502465 | 6.3:+15175381 | MS.gene47051:CDS |
AACTTGTTACCAAGATTGAC+AGG | 0.511236 | 6.3:+15175851 | MS.gene47051:CDS |
CACCCTGGTCAGATTGGAAA+CGG | 0.512174 | 6.3:+15175775 | MS.gene47051:CDS |
TACCTAGCCTTCGAGTACTT+AGG | 0.513356 | 6.3:-15175244 | None:intergenic |
GATTGACAGGCGATCTGGTA+AGG | 0.518046 | 6.3:+15175864 | MS.gene47051:CDS |
CTTGTACCAGTCAAGGTTGG+TGG | 0.518944 | 6.3:-15175380 | None:intergenic |
TTGGTGACTTTGGCTCCAGT+GGG | 0.520107 | 6.3:-15176066 | None:intergenic |
ATCATTGACTCCACCACTGG+TGG | 0.521304 | 6.3:+15175013 | MS.gene47051:CDS |
AGAGGTCCACCAACCTTGAC+TGG | 0.523105 | 6.3:+15175374 | MS.gene47051:CDS |
CCGGTCTCAACACGTCCGAC+TGG | 0.523632 | 6.3:-15175517 | None:intergenic |
GAGCCCAAGTTCTTGAAGAA+TGG | 0.525810 | 6.3:+15175898 | MS.gene47051:CDS |
TTGAATCCGACATTGTCTCC+TGG | 0.526013 | 6.3:-15175640 | None:intergenic |
TCAACCACCATGGGCTTGGT+GGG | 0.529820 | 6.3:-15175946 | None:intergenic |
CTTATCATTGACTCCACCAC+TGG | 0.532051 | 6.3:+15175010 | MS.gene47051:CDS |
AGCGTTCATTCAAGTACGCA+TGG | 0.534658 | 6.3:+15174822 | MS.gene47051:CDS |
TCACCATTCTTCAAGAACTT+GGG | 0.540637 | 6.3:-15175901 | None:intergenic |
CCAAAAGTCACAACCATACC+GGG | 0.540748 | 6.3:-15175550 | None:intergenic |
GATGACTTGGGAAGTGAAGT+TGG | 0.546093 | 6.3:-15175743 | None:intergenic |
TCCCTTGTACCAGTCAAGGT+TGG | 0.546130 | 6.3:-15175383 | None:intergenic |
CAGTGGTGGAGTCAATGATA+AGG | 0.548349 | 6.3:-15175009 | None:intergenic |
TATCCGTTTCCAATCTGACC+AGG | 0.548901 | 6.3:-15175778 | None:intergenic |
CGGTATTGTGAAGCCCGGTA+TGG | 0.551104 | 6.3:+15175537 | MS.gene47051:CDS |
TTCTTGAAGAATGGTGATGC+TGG | 0.554703 | 6.3:+15175907 | MS.gene47051:CDS |
TTGATGAAATCACGATGTCC+AGG | 0.556820 | 6.3:-15174947 | None:intergenic |
TCACCTTCAAATCCGGAGAT+GGG | 0.557788 | 6.3:-15175340 | None:intergenic |
CATACCGGGCTTCACAATAC+CGG | 0.558131 | 6.3:-15175536 | None:intergenic |
ACCAACCTTGACTGGTACAA+GGG | 0.559612 | 6.3:+15175382 | MS.gene47051:CDS |
GCAAAGGTCTCAACCACCAT+GGG | 0.563446 | 6.3:-15175955 | None:intergenic |
ATCTGGTAAGGAGATTGAAA+AGG | 0.563892 | 6.3:+15175876 | MS.gene47051:CDS |
AGTTGGCAGCTTCCTTGGCA+GGG | 0.564600 | 6.3:-15175726 | None:intergenic |
GGTGGTTCATGATGATGACT+TGG | 0.569890 | 6.3:-15175756 | None:intergenic |
GACCCACAGACAAGCCCCTA+AGG | 0.571251 | 6.3:+15175449 | MS.gene47051:CDS |
AGCTTCAAAACCACCAGTGG+TGG | 0.571917 | 6.3:-15175023 | None:intergenic |
TCTTGCAATGGAAGCCTTAG+GGG | 0.574701 | 6.3:-15175463 | None:intergenic |
TTGGTCCCTTGTACCAGTCA+AGG | 0.575920 | 6.3:-15175387 | None:intergenic |
GACTGTGCAGTAGTACTTGG+TGG | 0.578462 | 6.3:-15174915 | None:intergenic |
CCAGTCGGACGTGTTGAGAC+CGG | 0.578770 | 6.3:+15175517 | MS.gene47051:CDS |
TGTTAAGAATGTTGCTGTGA+AGG | 0.579878 | 6.3:+15175663 | MS.gene47051:CDS |
CATGATTACTGGAACCTCCC+AGG | 0.581850 | 6.3:+15174973 | MS.gene47051:CDS |
TCAAGAGCCTCAAGGAGAGT+TGG | 0.584894 | 6.3:-15175406 | None:intergenic |
AAGCGAGAAGAGCATGCTCA+CGG | 0.587754 | 6.3:-15175069 | None:intergenic |
AACTTCAGTTGTCAAACCAG+TGG | 0.589445 | 6.3:-15175575 | None:intergenic |
AATGACTGTGCAGTAGTACT+TGG | 0.591989 | 6.3:-15174918 | None:intergenic |
GAAGCTGGTATCTCTAAGGA+TGG | 0.592030 | 6.3:+15175040 | MS.gene47051:CDS |
ATCTTGTAAACATCTTGCAA+TGG | 0.592677 | 6.3:-15175475 | None:intergenic |
GAGGTGTGGCAATCGAGCAC+TGG | 0.595189 | 6.3:-15175805 | None:intergenic |
AGCGAGAAGAGCATGCTCAC+GGG | 0.595279 | 6.3:-15175068 | None:intergenic |
TTTGCTGAATATCCTCCACT+TGG | 0.598309 | 6.3:+15175973 | MS.gene47051:CDS |
GTGGAGAAGAAGGATCCCAC+TGG | 0.600566 | 6.3:+15176051 | MS.gene47051:CDS |
AAGGACTGCACAATCAGCCT+GGG | 0.602280 | 6.3:-15174990 | None:intergenic |
GGTCACTTGATCTACAAGCT+AGG | 0.604596 | 6.3:+15174743 | MS.gene47051:CDS |
TGTTGGTGTCATCAAGGCTG+TGG | 0.608422 | 6.3:+15176032 | MS.gene47051:CDS |
AAATCCGGAGATGGGAACGA+AGG | 0.610633 | 6.3:-15175332 | None:intergenic |
GATGGTTCCCACCAAGCCCA+TGG | 0.611182 | 6.3:+15175939 | MS.gene47051:CDS |
AATCCGGAGATGGGAACGAA+GGG | 0.611560 | 6.3:-15175331 | None:intergenic |
TTTCCACAAGGCAATATCGA+TGG | 0.613258 | 6.3:-15174885 | None:intergenic |
GCGTTCATTCAAGTACGCAT+GGG | 0.615188 | 6.3:+15174823 | MS.gene47051:CDS |
ACTTCAGTTGTCAAACCAGT+GGG | 0.615673 | 6.3:-15175574 | None:intergenic |
AGCAAAGGTCTCAACCACCA+TGG | 0.617611 | 6.3:-15175956 | None:intergenic |
CTCCAAGGATGACCCTGCCA+AGG | 0.619064 | 6.3:+15175714 | MS.gene47051:CDS |
TTTCGTTGCATCCAACTCCA+AGG | 0.619372 | 6.3:+15175699 | MS.gene47051:CDS |
AGTTGCTGTTGGTGTCATCA+AGG | 0.621005 | 6.3:+15176026 | MS.gene47051:CDS |
CCCCTAAGTACTCGAAGGCT+AGG | 0.623456 | 6.3:+15175242 | MS.gene47051:CDS |
AAGGTGACAACATGATTGAG+AGG | 0.624581 | 6.3:+15175356 | MS.gene47051:CDS |
GAGACCGGTATTGTGAAGCC+CGG | 0.625104 | 6.3:+15175532 | MS.gene47051:CDS |
TGATCTGGTCAAGAGCCTCA+AGG | 0.634180 | 6.3:-15175414 | None:intergenic |
GATGATCTGTTGTTGTAACA+AGG | 0.635291 | 6.3:+15175111 | MS.gene47051:CDS |
TGATGCTGGTATCATTAAGA+TGG | 0.636151 | 6.3:+15175921 | MS.gene47051:CDS |
TGTGATCGAGAGATTCGAGA+AGG | 0.638590 | 6.3:+15174781 | MS.gene47051:CDS |
GACTGCACAATCAGCCTGGG+AGG | 0.640106 | 6.3:-15174987 | None:intergenic |
CACTTGATCTACAAGCTAGG+AGG | 0.645428 | 6.3:+15174746 | MS.gene47051:CDS |
TTACCATCGATATTGCCTTG+TGG | 0.647445 | 6.3:+15174882 | MS.gene47051:CDS |
GTCATCATCATGAACCACCC+TGG | 0.650188 | 6.3:+15175760 | MS.gene47051:CDS |
CCTAGCCTTCGAGTACTTAG+GGG | 0.651395 | 6.3:-15175242 | None:intergenic |
GCTCTTCCAGGAGACAATGT+CGG | 0.651488 | 6.3:+15175634 | MS.gene47051:CDS |
AAACTTCACAGCAATGTGAG+AGG | 0.653594 | 6.3:-15175824 | None:intergenic |
ACAGCAAAACGTCCAAGTGG+AGG | 0.656142 | 6.3:-15175985 | None:intergenic |
ATGCGTCAAACAGTTGCTGT+TGG | 0.665270 | 6.3:+15176015 | MS.gene47051:CDS |
TAGGTACGATGAAATCGTGA+AGG | 0.668064 | 6.3:+15175261 | MS.gene47051:CDS |
ACCAGCTTCAAAACCACCAG+TGG | 0.669846 | 6.3:-15175026 | None:intergenic |
TCACAGCAATGTGAGAGGTG+TGG | 0.670228 | 6.3:-15175819 | None:intergenic |
TACCACCCCTAAGTACTCGA+AGG | 0.670350 | 6.3:+15175237 | MS.gene47051:CDS |
AAGTGGAGGATATTCAGCAA+AGG | 0.671437 | 6.3:-15175971 | None:intergenic |
AGCCTTCGAGTACTTAGGGG+TGG | 0.671611 | 6.3:-15175239 | None:intergenic |
GTCTGTTGAGATGCATCACG+AGG | 0.676379 | 6.3:+15175600 | MS.gene47051:CDS |
CAAGGGACCAACTCTCCTTG+AGG | 0.682171 | 6.3:+15175399 | MS.gene47051:CDS |
GGTATTGGTACTGTGCCAGT+CGG | 0.686491 | 6.3:+15175502 | MS.gene47051:CDS |
CTGACAGCAAAACGTCCAAG+TGG | 0.686824 | 6.3:-15175988 | None:intergenic |
CGTTTCCAATCTGACCAGGG+TGG | 0.687081 | 6.3:-15175774 | None:intergenic |
ATCCGTTTCCAATCTGACCA+GGG | 0.688739 | 6.3:-15175777 | None:intergenic |
GTGGTTCATGATGATGACTT+GGG | 0.690284 | 6.3:-15175755 | None:intergenic |
GCTGTGAAGGATCTCAAGCG+TGG | 0.706441 | 6.3:+15175676 | MS.gene47051:CDS |
GGTTCCCACCAAGCCCATGG+TGG | 0.716413 | 6.3:+15175942 | MS.gene47051:CDS |
GGTGGTCTCGAATTTCCACA+AGG | 0.719757 | 6.3:-15174897 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATGATTTTTATGTTGAGTTA+CGG | + | chr6.3:15175174-15175193 | MS.gene47051:intron | 20.0% |
!!! | TTTCAATATTTTGATTCAGA+TGG | + | chr6.3:15175210-15175229 | MS.gene47051:intron | 20.0% |
AGTTTCATCATACTTGAAGA+AGG | + | chr6.3:15175285-15175304 | MS.gene47051:CDS | 30.0% | |
ATCTTGTAAACATCTTGCAA+TGG | - | chr6.3:15175478-15175497 | None:intergenic | 30.0% | |
TTCATCAAGAACATGATTAC+TGG | + | chr6.3:15174962-15174981 | MS.gene47051:CDS | 30.0% | |
TTGCAAGATGTTTACAAGAT+TGG | + | chr6.3:15175478-15175497 | MS.gene47051:CDS | 30.0% | |
ATCACCATTCTTCAAGAACT+TGG | - | chr6.3:15175905-15175924 | None:intergenic | 35.0% | |
ATCTGGTAAGGAGATTGAAA+AGG | + | chr6.3:15175876-15175895 | MS.gene47051:CDS | 35.0% | |
ATGGGTTCTTGACAAACTTA+AGG | + | chr6.3:15174841-15174860 | MS.gene47051:CDS | 35.0% | |
CAAGATGTTTACAAGATTGG+TGG | + | chr6.3:15175481-15175500 | MS.gene47051:CDS | 35.0% | |
CATATCAACATTGTCGTCAT+TGG | + | chr6.3:15174689-15174708 | MS.gene47051:CDS | 35.0% | |
GATGATCTGTTGTTGTAACA+AGG | + | chr6.3:15175111-15175130 | MS.gene47051:CDS | 35.0% | |
TCACCATTCTTCAAGAACTT+GGG | - | chr6.3:15175904-15175923 | None:intergenic | 35.0% | |
TCATCATACTTGAAGAAGGT+TGG | + | chr6.3:15175289-15175308 | MS.gene47051:CDS | 35.0% | |
TCTGGAAAATCAACAACAAC+TGG | + | chr6.3:15174722-15174741 | MS.gene47051:CDS | 35.0% | |
TGATGCTGGTATCATTAAGA+TGG | + | chr6.3:15175921-15175940 | MS.gene47051:CDS | 35.0% | |
TGTTAAGAATGTTGCTGTGA+AGG | + | chr6.3:15175663-15175682 | MS.gene47051:CDS | 35.0% | |
! | GTTTACAAGATTGGTGGTAT+TGG | + | chr6.3:15175487-15175506 | MS.gene47051:CDS | 35.0% |
!! | AACTTGTTACCAAGATTGAC+AGG | + | chr6.3:15175851-15175870 | MS.gene47051:CDS | 35.0% |
!!! | TTTTGAAGCTGGTATCTCTA+AGG | + | chr6.3:15175036-15175055 | MS.gene47051:CDS | 35.0% |
AAACTTCACAGCAATGTGAG+AGG | - | chr6.3:15175827-15175846 | None:intergenic | 40.0% | |
AACTTCAGTTGTCAAACCAG+TGG | - | chr6.3:15175578-15175597 | None:intergenic | 40.0% | |
AAGGTGACAACATGATTGAG+AGG | + | chr6.3:15175356-15175375 | MS.gene47051:CDS | 40.0% | |
AAGTGGAGGATATTCAGCAA+AGG | - | chr6.3:15175974-15175993 | None:intergenic | 40.0% | |
AATGACTGTGCAGTAGTACT+TGG | - | chr6.3:15174921-15174940 | None:intergenic | 40.0% | |
ACTTCAGTTGTCAAACCAGT+GGG | - | chr6.3:15175577-15175596 | None:intergenic | 40.0% | |
ATCTTGCAATGGAAGCCTTA+GGG | - | chr6.3:15175467-15175486 | None:intergenic | 40.0% | |
CATGTTGTCACCTTCAAATC+CGG | - | chr6.3:15175350-15175369 | None:intergenic | 40.0% | |
TAGGTACGATGAAATCGTGA+AGG | + | chr6.3:15175261-15175280 | MS.gene47051:CDS | 40.0% | |
TCCAAAAGTCACAACCATAC+CGG | - | chr6.3:15175554-15175573 | None:intergenic | 40.0% | |
TGAGTTACGGATTCTGACTT+TGG | + | chr6.3:15175187-15175206 | MS.gene47051:intron | 40.0% | |
TTACCATCGATATTGCCTTG+TGG | + | chr6.3:15174882-15174901 | MS.gene47051:CDS | 40.0% | |
TTGATGAAATCACGATGTCC+AGG | - | chr6.3:15174950-15174969 | None:intergenic | 40.0% | |
TTTCCACAAGGCAATATCGA+TGG | - | chr6.3:15174888-15174907 | None:intergenic | 40.0% | |
TTTGCTGAATATCCTCCACT+TGG | + | chr6.3:15175973-15175992 | MS.gene47051:CDS | 40.0% | |
! | GAACGAAGGGAATTTTGTCT+GGG | - | chr6.3:15175321-15175340 | None:intergenic | 40.0% |
! | GTGGTTCATGATGATGACTT+GGG | - | chr6.3:15175758-15175777 | None:intergenic | 40.0% |
! | TTCTTGAAGAATGGTGATGC+TGG | + | chr6.3:15175907-15175926 | MS.gene47051:CDS | 40.0% |
ACCAACCTTGACTGGTACAA+GGG | + | chr6.3:15175382-15175401 | MS.gene47051:CDS | 45.0% | |
AGCGTTCATTCAAGTACGCA+TGG | + | chr6.3:15174822-15174841 | MS.gene47051:CDS | 45.0% | |
ATCCGTTTCCAATCTGACCA+GGG | - | chr6.3:15175780-15175799 | None:intergenic | 45.0% | |
ATGCGTCAAACAGTTGCTGT+TGG | + | chr6.3:15176015-15176034 | MS.gene47051:CDS | 45.0% | |
CACTTGATCTACAAGCTAGG+AGG | + | chr6.3:15174746-15174765 | MS.gene47051:CDS | 45.0% | |
CATCTTGCAATGGAAGCCTT+AGG | - | chr6.3:15175468-15175487 | None:intergenic | 45.0% | |
CCAAAAGTCACAACCATACC+GGG | - | chr6.3:15175553-15175572 | None:intergenic | 45.0% | |
GAGCCCAAGTTCTTGAAGAA+TGG | + | chr6.3:15175898-15175917 | MS.gene47051:CDS | 45.0% | |
GCGTTCATTCAAGTACGCAT+GGG | + | chr6.3:15174823-15174842 | MS.gene47051:CDS | 45.0% | |
GGTCACTTGATCTACAAGCT+AGG | + | chr6.3:15174743-15174762 | MS.gene47051:CDS | 45.0% | |
TATCCGTTTCCAATCTGACC+AGG | - | chr6.3:15175781-15175800 | None:intergenic | 45.0% | |
TCACCTTCAAATCCGGAGAT+GGG | - | chr6.3:15175343-15175362 | None:intergenic | 45.0% | |
TCTTGCAATGGAAGCCTTAG+GGG | - | chr6.3:15175466-15175485 | None:intergenic | 45.0% | |
TGTGATCGAGAGATTCGAGA+AGG | + | chr6.3:15174781-15174800 | MS.gene47051:CDS | 45.0% | |
TTGAATCCGACATTGTCTCC+TGG | - | chr6.3:15175643-15175662 | None:intergenic | 45.0% | |
TTTCGTTGCATCCAACTCCA+AGG | + | chr6.3:15175699-15175718 | MS.gene47051:CDS | 45.0% | |
! | ACCTAGCCTTCGAGTACTTA+GGG | - | chr6.3:15175246-15175265 | None:intergenic | 45.0% |
! | CAGTGGTGGAGTCAATGATA+AGG | - | chr6.3:15175012-15175031 | None:intergenic | 45.0% |
! | GAAGCTGGTATCTCTAAGGA+TGG | + | chr6.3:15175040-15175059 | MS.gene47051:CDS | 45.0% |
! | GATGACTTGGGAAGTGAAGT+TGG | - | chr6.3:15175746-15175765 | None:intergenic | 45.0% |
! | GGAACGAAGGGAATTTTGTC+TGG | - | chr6.3:15175322-15175341 | None:intergenic | 45.0% |
! | GGTGGTTCATGATGATGACT+TGG | - | chr6.3:15175759-15175778 | None:intergenic | 45.0% |
! | TACCTAGCCTTCGAGTACTT+AGG | - | chr6.3:15175247-15175266 | None:intergenic | 45.0% |
!! | AGTTGCTGTTGGTGTCATCA+AGG | + | chr6.3:15176026-15176045 | MS.gene47051:CDS | 45.0% |
!! | CTTATCATTGACTCCACCAC+TGG | + | chr6.3:15175010-15175029 | MS.gene47051:CDS | 45.0% |
!! | GCTCTTCTCGCTTTTACTCT+TGG | + | chr6.3:15175079-15175098 | MS.gene47051:CDS | 45.0% |
AAATCCGGAGATGGGAACGA+AGG | - | chr6.3:15175335-15175354 | None:intergenic | 50.0% | |
AAGGACTGCACAATCAGCCT+GGG | - | chr6.3:15174993-15175012 | None:intergenic | 50.0% | |
AATCCGGAGATGGGAACGAA+GGG | - | chr6.3:15175334-15175353 | None:intergenic | 50.0% | |
ACAGCAAAACGTCCAAGTGG+AGG | - | chr6.3:15175988-15176007 | None:intergenic | 50.0% | |
ACCAAGATTGACAGGCGATC+TGG | + | chr6.3:15175859-15175878 | MS.gene47051:CDS | 50.0% | |
ACCAGATCGCCTGTCAATCT+TGG | - | chr6.3:15175863-15175882 | None:intergenic | 50.0% | |
ACCAGCTTCAAAACCACCAG+TGG | - | chr6.3:15175029-15175048 | None:intergenic | 50.0% | |
AGCAAAGGTCTCAACCACCA+TGG | - | chr6.3:15175959-15175978 | None:intergenic | 50.0% | |
AGCTTCAAAACCACCAGTGG+TGG | - | chr6.3:15175026-15175045 | None:intergenic | 50.0% | |
AGTGAAGTTGGCAGCTTCCT+TGG | - | chr6.3:15175734-15175753 | None:intergenic | 50.0% | |
ATGAACCACCCTGGTCAGAT+TGG | + | chr6.3:15175769-15175788 | MS.gene47051:CDS | 50.0% | |
ATTCCCTTCGTTCCCATCTC+CGG | + | chr6.3:15175328-15175347 | MS.gene47051:CDS | 50.0% | |
CACCAACCTTGACTGGTACA+AGG | + | chr6.3:15175381-15175400 | MS.gene47051:CDS | 50.0% | |
CACCCTGGTCAGATTGGAAA+CGG | + | chr6.3:15175775-15175794 | MS.gene47051:CDS | 50.0% | |
CATACCGGGCTTCACAATAC+CGG | - | chr6.3:15175539-15175558 | None:intergenic | 50.0% | |
CATCAAGGCTGTGGAGAAGA+AGG | + | chr6.3:15176041-15176060 | MS.gene47051:CDS | 50.0% | |
CATGATTACTGGAACCTCCC+AGG | + | chr6.3:15174973-15174992 | MS.gene47051:CDS | 50.0% | |
CTGACAGCAAAACGTCCAAG+TGG | - | chr6.3:15175991-15176010 | None:intergenic | 50.0% | |
CTTAAGGCTGAGCGTGAAAG+AGG | + | chr6.3:15174857-15174876 | MS.gene47051:CDS | 50.0% | |
CTTCTTCTTGGCAGCAGCTT+TGG | - | chr6.3:15176088-15176107 | None:intergenic | 50.0% | |
CTTGTACCAGTCAAGGTTGG+TGG | - | chr6.3:15175383-15175402 | None:intergenic | 50.0% | |
GACTGTGCAGTAGTACTTGG+TGG | - | chr6.3:15174918-15174937 | None:intergenic | 50.0% | |
GATTGACAGGCGATCTGGTA+AGG | + | chr6.3:15175864-15175883 | MS.gene47051:CDS | 50.0% | |
GCAAAGGTCTCAACCACCAT+GGG | - | chr6.3:15175958-15175977 | None:intergenic | 50.0% | |
GCTCTTCCAGGAGACAATGT+CGG | + | chr6.3:15175634-15175653 | MS.gene47051:CDS | 50.0% | |
GGTGGTCTCGAATTTCCACA+AGG | - | chr6.3:15174900-15174919 | None:intergenic | 50.0% | |
GTCACCTTCAAATCCGGAGA+TGG | - | chr6.3:15175344-15175363 | None:intergenic | 50.0% | |
GTCATCATCATGAACCACCC+TGG | + | chr6.3:15175760-15175779 | MS.gene47051:CDS | 50.0% | |
GTCTGTTGAGATGCATCACG+AGG | + | chr6.3:15175600-15175619 | MS.gene47051:CDS | 50.0% | |
GTTCCCATCTCCGGATTTGA+AGG | + | chr6.3:15175337-15175356 | MS.gene47051:CDS | 50.0% | |
TAAGGACTGCACAATCAGCC+TGG | - | chr6.3:15174994-15175013 | None:intergenic | 50.0% | |
TACCACCCCTAAGTACTCGA+AGG | + | chr6.3:15175237-15175256 | MS.gene47051:CDS | 50.0% | |
TCAAGAGCCTCAAGGAGAGT+TGG | - | chr6.3:15175409-15175428 | None:intergenic | 50.0% | |
TCACAGCAATGTGAGAGGTG+TGG | - | chr6.3:15175822-15175841 | None:intergenic | 50.0% | |
TCCCTTGTACCAGTCAAGGT+TGG | - | chr6.3:15175386-15175405 | None:intergenic | 50.0% | |
TGATCTGGTCAAGAGCCTCA+AGG | - | chr6.3:15175417-15175436 | None:intergenic | 50.0% | |
TGCACAGTCATTGATGCTCC+TGG | + | chr6.3:15174929-15174948 | MS.gene47051:CDS | 50.0% | |
TTGGTCCCTTGTACCAGTCA+AGG | - | chr6.3:15175390-15175409 | None:intergenic | 50.0% | |
! | AAGCGAGAAGAGCATGCTCA+CGG | - | chr6.3:15175072-15175091 | None:intergenic | 50.0% |
! | CCCGGTATGGTTGTGACTTT+TGG | + | chr6.3:15175550-15175569 | MS.gene47051:CDS | 50.0% |
! | CCTAGCCTTCGAGTACTTAG+GGG | - | chr6.3:15175245-15175264 | None:intergenic | 50.0% |
! | GTTGTGACTTTTGGACCCAC+TGG | + | chr6.3:15175559-15175578 | MS.gene47051:CDS | 50.0% |
! | TTGGTGACTTTGGCTCCAGT+GGG | - | chr6.3:15176069-15176088 | None:intergenic | 50.0% |
! | TTTGGTGACTTTGGCTCCAG+TGG | - | chr6.3:15176070-15176089 | None:intergenic | 50.0% |
!! | ATCATTGACTCCACCACTGG+TGG | + | chr6.3:15175013-15175032 | MS.gene47051:CDS | 50.0% |
!! | GGTATTGGTACTGTGCCAGT+CGG | + | chr6.3:15175502-15175521 | MS.gene47051:CDS | 50.0% |
!! | GTCATTGGACATGTCGACTC+TGG | + | chr6.3:15174704-15174723 | MS.gene47051:CDS | 50.0% |
!! | TGTTGGTGTCATCAAGGCTG+TGG | + | chr6.3:15176032-15176051 | MS.gene47051:CDS | 50.0% |
!!! | ACCACTGGTGGTTTTGAAGC+TGG | + | chr6.3:15175025-15175044 | MS.gene47051:CDS | 50.0% |
AAGCCTTAGGGGCTTGTCTG+TGG | - | chr6.3:15175455-15175474 | None:intergenic | 55.0% | |
AAGTTGGCAGCTTCCTTGGC+AGG | - | chr6.3:15175730-15175749 | None:intergenic | 55.0% | |
AGAGGTCCACCAACCTTGAC+TGG | + | chr6.3:15175374-15175393 | MS.gene47051:CDS | 55.0% | |
AGCCTTAGGGGCTTGTCTGT+GGG | - | chr6.3:15175454-15175473 | None:intergenic | 55.0% | |
AGCCTTCGAGTACTTAGGGG+TGG | - | chr6.3:15175242-15175261 | None:intergenic | 55.0% | |
AGTTGGCAGCTTCCTTGGCA+GGG | - | chr6.3:15175729-15175748 | None:intergenic | 55.0% | |
CAAGGGACCAACTCTCCTTG+AGG | + | chr6.3:15175399-15175418 | MS.gene47051:CDS | 55.0% | |
CCCCTAAGTACTCGAAGGCT+AGG | + | chr6.3:15175242-15175261 | MS.gene47051:CDS | 55.0% | |
CGGTATTGTGAAGCCCGGTA+TGG | + | chr6.3:15175537-15175556 | MS.gene47051:CDS | 55.0% | |
CGTTTCCAATCTGACCAGGG+TGG | - | chr6.3:15175777-15175796 | None:intergenic | 55.0% | |
GAGACCGGTATTGTGAAGCC+CGG | + | chr6.3:15175532-15175551 | MS.gene47051:CDS | 55.0% | |
GCTCTCACTGAAGCTCTTCC+AGG | + | chr6.3:15175622-15175641 | MS.gene47051:CDS | 55.0% | |
GCTGTGAAGGATCTCAAGCG+TGG | + | chr6.3:15175676-15175695 | MS.gene47051:CDS | 55.0% | |
GGCTTGTCTGTGGGTCTCTT+GGG | - | chr6.3:15175445-15175464 | None:intergenic | 55.0% | |
GTCTCTTGGGCTCGTTGATC+TGG | - | chr6.3:15175432-15175451 | None:intergenic | 55.0% | |
GTGGAGAAGAAGGATCCCAC+TGG | + | chr6.3:15176051-15176070 | MS.gene47051:CDS | 55.0% | |
TTCCTTGGCAGGGTCATCCT+TGG | - | chr6.3:15175719-15175738 | None:intergenic | 55.0% | |
! | AGCGAGAAGAGCATGCTCAC+GGG | - | chr6.3:15175071-15175090 | None:intergenic | 55.0% |
! | GGCAGCAGCTTTGGTGACTT+TGG | - | chr6.3:15176079-15176098 | None:intergenic | 55.0% |
! | TCAACCACCATGGGCTTGGT+GGG | - | chr6.3:15175949-15175968 | None:intergenic | 55.0% |
CCAGTCGGACGTGTTGAGAC+CGG | + | chr6.3:15175517-15175536 | MS.gene47051:CDS | 60.0% | |
CTCAACCACCATGGGCTTGG+TGG | - | chr6.3:15175950-15175969 | None:intergenic | 60.0% | |
CTCCAAGGATGACCCTGCCA+AGG | + | chr6.3:15175714-15175733 | MS.gene47051:CDS | 60.0% | |
GACCCACAGACAAGCCCCTA+AGG | + | chr6.3:15175449-15175468 | MS.gene47051:CDS | 60.0% | |
GACTGCACAATCAGCCTGGG+AGG | - | chr6.3:15174990-15175009 | None:intergenic | 60.0% | |
GAGGTGTGGCAATCGAGCAC+TGG | - | chr6.3:15175808-15175827 | None:intergenic | 60.0% | |
GATGGTTCCCACCAAGCCCA+TGG | + | chr6.3:15175939-15175958 | MS.gene47051:CDS | 60.0% | |
GGCAGGGTCATCCTTGGAGT+TGG | - | chr6.3:15175713-15175732 | None:intergenic | 60.0% | |
GGGCTTGTCTGTGGGTCTCT+TGG | - | chr6.3:15175446-15175465 | None:intergenic | 60.0% | |
GGTCTCAACCACCATGGGCT+TGG | - | chr6.3:15175953-15175972 | None:intergenic | 60.0% | |
CCGGTCTCAACACGTCCGAC+TGG | - | chr6.3:15175520-15175539 | None:intergenic | 65.0% | |
GGTTCCCACCAAGCCCATGG+TGG | + | chr6.3:15175942-15175961 | MS.gene47051:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 15174671 | 15176110 | 15174671 | ID=MS.gene47051 |
chr6.3 | mRNA | 15174671 | 15176110 | 15174671 | ID=MS.gene47051.t1;Parent=MS.gene47051 |
chr6.3 | exon | 15174671 | 15175132 | 15174671 | ID=MS.gene47051.t1.exon1;Parent=MS.gene47051.t1 |
chr6.3 | CDS | 15174671 | 15175132 | 15174671 | ID=cds.MS.gene47051.t1;Parent=MS.gene47051.t1 |
chr6.3 | exon | 15175229 | 15176110 | 15175229 | ID=MS.gene47051.t1.exon2;Parent=MS.gene47051.t1 |
chr6.3 | CDS | 15175229 | 15176110 | 15175229 | ID=cds.MS.gene47051.t1;Parent=MS.gene47051.t1 |
Gene Sequence |
Protein sequence |