Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34008.t1 | XP_003591959.2 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 1.60E-259 | 904.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34008.t1 | O24534 | 95.5 | 448 | 19 | 1 | 1 | 448 | 1 | 447 | 9.3e-253 | 873.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34008.t1 | G7I9L3 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 1.1e-259 | 904.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34008.t1 | MTR_1g495705 | 99.777 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 0.0 | 920 |
| MS.gene34008.t1 | MTR_1g095650 | 99.777 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 0.0 | 920 |
| MS.gene34008.t1 | MTR_1g095703 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 920 |
| MS.gene34008.t1 | MTR_4g014810 | 96.205 | 448 | 16 | 1 | 1 | 448 | 1 | 447 | 0.0 | 889 |
| MS.gene34008.t1 | MTR_6g021800 | 97.477 | 436 | 11 | 0 | 1 | 436 | 1 | 436 | 0.0 | 887 |
| MS.gene34008.t1 | MTR_6g021805 | 97.477 | 436 | 11 | 0 | 1 | 436 | 1 | 436 | 0.0 | 887 |
| MS.gene34008.t1 | MTR_1g013680 | 95.565 | 451 | 17 | 1 | 1 | 448 | 1 | 451 | 0.0 | 882 |
| MS.gene34008.t1 | MTR_1g085410 | 82.488 | 434 | 76 | 0 | 1 | 434 | 1 | 434 | 0.0 | 743 |
| MS.gene34008.t1 | MTR_1g101870 | 81.922 | 437 | 74 | 3 | 1 | 437 | 1 | 432 | 0.0 | 735 |
| MS.gene34008.t1 | MTR_1g101870 | 81.922 | 437 | 74 | 3 | 1 | 437 | 1 | 432 | 0.0 | 734 |
| MS.gene34008.t1 | MTR_1g024175 | 79.032 | 434 | 91 | 0 | 1 | 434 | 1 | 434 | 0.0 | 726 |
| MS.gene34008.t1 | MTR_8g014590 | 79.733 | 449 | 89 | 1 | 1 | 447 | 1 | 449 | 0.0 | 722 |
| MS.gene34008.t1 | MTR_1g095650 | 99.712 | 347 | 1 | 0 | 102 | 448 | 1 | 347 | 0.0 | 712 |
| MS.gene34008.t1 | MTR_2g082730 | 71.141 | 447 | 111 | 3 | 1 | 445 | 1 | 431 | 0.0 | 644 |
| MS.gene34008.t1 | MTR_5g037350 | 67.660 | 470 | 115 | 1 | 3 | 435 | 13 | 482 | 0.0 | 634 |
| MS.gene34008.t1 | MTR_1g089520 | 71.163 | 430 | 106 | 3 | 4 | 432 | 5 | 417 | 0.0 | 627 |
| MS.gene34008.t1 | MTR_2g082665 | 66.219 | 447 | 107 | 3 | 1 | 445 | 1 | 405 | 0.0 | 586 |
| MS.gene34008.t1 | MTR_2g037420 | 65.589 | 433 | 106 | 3 | 1 | 431 | 1 | 392 | 0.0 | 561 |
| MS.gene34008.t1 | MTR_8g013910 | 63.920 | 449 | 127 | 5 | 1 | 433 | 1 | 430 | 0.0 | 551 |
| MS.gene34008.t1 | MTR_2g080210 | 64.598 | 435 | 118 | 4 | 1 | 432 | 1 | 402 | 0.0 | 550 |
| MS.gene34008.t1 | MTR_8g008740 | 78.221 | 326 | 70 | 1 | 1 | 325 | 1 | 326 | 0.0 | 540 |
| MS.gene34008.t1 | MTR_1g112460 | 66.107 | 298 | 60 | 4 | 155 | 447 | 1 | 262 | 5.10e-127 | 369 |
| MS.gene34008.t1 | MTR_1g495735 | 76.119 | 201 | 38 | 1 | 240 | 430 | 106 | 306 | 4.14e-101 | 304 |
| MS.gene34008.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 5.20e-17 | 82.0 |
| MS.gene34008.t1 | MTR_6g080420 | 37.963 | 432 | 254 | 6 | 5 | 428 | 89 | 514 | 9.27e-97 | 300 |
| MS.gene34008.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 43 | 470 | 1.33e-93 | 291 |
| MS.gene34008.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 49 | 476 | 1.58e-93 | 291 |
| MS.gene34008.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 70 | 497 | 4.03e-93 | 290 |
| MS.gene34008.t1 | MTR_8g087950 | 35.797 | 433 | 269 | 6 | 7 | 433 | 275 | 704 | 4.41e-91 | 291 |
| MS.gene34008.t1 | MTR_8g087950 | 35.797 | 433 | 269 | 6 | 7 | 433 | 348 | 777 | 1.97e-90 | 291 |
| MS.gene34008.t1 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 8.11e-90 | 274 |
| MS.gene34008.t1 | MTR_4g054970 | 56.612 | 242 | 76 | 4 | 193 | 431 | 50 | 265 | 8.66e-81 | 251 |
| MS.gene34008.t1 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 7.74e-13 | 68.9 |
| MS.gene34008.t1 | MTR_1g024165 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 1.51e-78 | 241 |
| MS.gene34008.t1 | MTR_8g014950 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 1.54e-47 | 159 |
| MS.gene34008.t1 | MTR_7g094460 | 30.594 | 438 | 244 | 14 | 3 | 429 | 59 | 447 | 5.74e-46 | 165 |
| MS.gene34008.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 8.52e-43 | 149 |
| MS.gene34008.t1 | MTR_2g021300 | 29.613 | 439 | 247 | 12 | 3 | 429 | 46 | 434 | 4.29e-42 | 154 |
| MS.gene34008.t1 | MTR_3g076660 | 29.955 | 444 | 250 | 15 | 3 | 429 | 88 | 487 | 4.94e-41 | 152 |
| MS.gene34008.t1 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 213 | 294 | 2 | 83 | 2.38e-28 | 110 |
| MS.gene34008.t1 | MTR_3g097250 | 26.471 | 272 | 143 | 9 | 9 | 272 | 85 | 307 | 1.38e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34008.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene34008.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene34008.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene34008.t1 | AT1G07920 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene34008.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene34008.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene34008.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene34008.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene34008.t1 | AT1G07930 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene34008.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 529 |
| MS.gene34008.t1 | AT1G07930 | 87.179 | 117 | 14 | 1 | 331 | 447 | 254 | 369 | 9.04e-65 | 213 |
| MS.gene34008.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 5.85e-94 | 293 |
| MS.gene34008.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 5.85e-94 | 293 |
| MS.gene34008.t1 | AT1G18070 | 36.927 | 436 | 256 | 6 | 5 | 424 | 99 | 531 | 6.61e-91 | 286 |
| MS.gene34008.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 239 | 660 | 2.50e-90 | 288 |
| MS.gene34008.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 240 | 661 | 2.55e-90 | 288 |
| MS.gene34008.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 240 | 661 | 2.55e-90 | 288 |
| MS.gene34008.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 310 | 731 | 1.83e-89 | 287 |
| MS.gene34008.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 315 | 736 | 1.94e-89 | 287 |
| MS.gene34008.t1 | AT1G35550 | 78.641 | 103 | 22 | 0 | 335 | 437 | 1 | 103 | 1.53e-53 | 174 |
| MS.gene34008.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 6.19e-44 | 160 |
| MS.gene34008.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 6.19e-44 | 160 |
| MS.gene34008.t1 | AT4G02930 | 30.296 | 439 | 245 | 15 | 3 | 429 | 63 | 452 | 7.33e-44 | 160 |
| MS.gene34008.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 3.00e-12 | 69.3 |
| MS.gene34008.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.42e-11 | 66.2 |
| MS.gene34008.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.72e-11 | 66.2 |
| MS.gene34008.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 4.14e-11 | 65.5 |
Find 152 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACCATTCTTCAAGAATT+TGG | 0.066665 | 1.4:-74355200 | None:intergenic |
| GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 1.4:+74354356 | MS.gene34008:CDS |
| GTCTACAAGATTGGAGGAAT+TGG | 0.315206 | 1.4:+74354785 | MS.gene34008:CDS |
| GCCTCTTAGGCTCATTGATT+TGG | 0.315866 | 1.4:-74354727 | None:intergenic |
| TGTCAAGAATGTTGCTGTTA+AGG | 0.325240 | 1.4:+74354961 | MS.gene34008:CDS |
| TCACCATTCTTCAAGAATTT+GGG | 0.331757 | 1.4:-74355199 | None:intergenic |
| ATAGCCAACCTTCTTCAAAT+AGG | 0.332380 | 1.4:-74354591 | None:intergenic |
| CTTCTTCTTCAATGCTGACT+TGG | 0.345006 | 1.4:-74355386 | None:intergenic |
| CACATCAACATTGTGGTCAT+TGG | 0.354316 | 1.4:+74353966 | MS.gene34008:CDS |
| TTCCTTGGCTGGGTCATCCT+TGG | 0.355973 | 1.4:-74355014 | None:intergenic |
| AAGTTGGCAGATTCCTTGGC+TGG | 0.367989 | 1.4:-74355025 | None:intergenic |
| ATTCCATTTGTTCCCATCTC+TGG | 0.368209 | 1.4:+74354626 | MS.gene34008:CDS |
| GCTCTCACAGAGGCCCTTCC+TGG | 0.369900 | 1.4:+74354920 | MS.gene34008:CDS |
| ATATCTACCCTTGGAGTACT+TGG | 0.380807 | 1.4:-74354543 | None:intergenic |
| ACTAAGATTGATAGGCGTTC+TGG | 0.382761 | 1.4:+74355157 | MS.gene34008:CDS |
| TCACCATTGACATTGCTCTT+TGG | 0.386025 | 1.4:+74354159 | MS.gene34008:CDS |
| TGCGTCAAACTGTGGCTGTT+GGG | 0.386099 | 1.4:+74355314 | MS.gene34008:CDS |
| GTCATTGGCCATGTCGACTC+TGG | 0.395247 | 1.4:+74353981 | MS.gene34008:CDS |
| GCAAAAGTGACAACCATTCC+AGG | 0.418006 | 1.4:-74354848 | None:intergenic |
| CTCATCATTGATTCCACTAC+TGG | 0.419293 | 1.4:+74354287 | MS.gene34008:CDS |
| ATGAATCACCCTGGCCAGAT+TGG | 0.425183 | 1.4:+74355067 | MS.gene34008:CDS |
| CTTAATGAAATCCCTGTGTC+CGG | 0.429384 | 1.4:-74354225 | None:intergenic |
| CCTGTGGGGCGTGTCGAGAC+TGG | 0.431830 | 1.4:+74354815 | MS.gene34008:CDS |
| CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 1.4:+74355073 | MS.gene34008:CDS |
| GCCCCTCCGACTACCACTTC+AGG | 0.433104 | 1.4:+74354760 | MS.gene34008:CDS |
| TGTAAAGTTGGCAGATTCCT+TGG | 0.433201 | 1.4:-74355029 | None:intergenic |
| TGACAAGCTTAAGGCTGAAC+GGG | 0.436450 | 1.4:+74354127 | MS.gene34008:CDS |
| AGCGTTCATTCAAGTATGCC+TGG | 0.444655 | 1.4:+74354099 | MS.gene34008:CDS |
| GAGCATAGCCATTTCCAATC+TGG | 0.445726 | 1.4:-74355081 | None:intergenic |
| GGCTTGTCTGAAGGCCTCTT+AGG | 0.446650 | 1.4:-74354740 | None:intergenic |
| AAACCAGAGATGGGAACAAA+TGG | 0.449170 | 1.4:-74354629 | None:intergenic |
| GGTCTGCTTAAGTCCTCCAC+TGG | 0.451209 | 1.4:-74355365 | None:intergenic |
| ACTTCAGTTGTCAGTCCAGT+AGG | 0.456008 | 1.4:-74354872 | None:intergenic |
| CTTCAGGATGTCTACAAGAT+TGG | 0.458119 | 1.4:+74354776 | MS.gene34008:CDS |
| AGTCTCAACCACCATGGGCT+TGG | 0.462350 | 1.4:-74355248 | None:intergenic |
| ACCAAATCAATGAGCCTAAG+AGG | 0.463105 | 1.4:+74354726 | MS.gene34008:CDS |
| CTGGGTCCTTGACAAGCTTA+AGG | 0.464518 | 1.4:+74354118 | MS.gene34008:CDS |
| TGGGTCATCCTTGGAGTTTG+AGG | 0.465051 | 1.4:-74355005 | None:intergenic |
| CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 1.4:-74355245 | None:intergenic |
| TAGGCTCATTGATTTGGTCA+AGG | 0.472707 | 1.4:-74354721 | None:intergenic |
| TTAATGAAATCCCTGTGTCC+GGG | 0.473933 | 1.4:-74354224 | None:intergenic |
| AGTCCAAATGGGTAAGGAAA+AGG | 0.474535 | 1.4:+74353941 | None:intergenic |
| AGGCTCATTGATTTGGTCAA+GGG | 0.475242 | 1.4:-74354720 | None:intergenic |
| AACTTGTTACTAAGATTGAT+AGG | 0.478352 | 1.4:+74355149 | MS.gene34008:CDS |
| TAGCCATTTCCAATCTGGCC+AGG | 0.481484 | 1.4:-74355076 | None:intergenic |
| ACAATCAGCTTGGGATGTTC+CGG | 0.483792 | 1.4:-74354258 | None:intergenic |
| TACAAACCTTGACTGGTACA+AGG | 0.490199 | 1.4:+74354679 | MS.gene34008:CDS |
| TCATCCTATTTGAAGAAGGT+TGG | 0.491235 | 1.4:+74354587 | MS.gene34008:CDS |
| GATTGATAGGCGTTCTGGTA+AGG | 0.495592 | 1.4:+74355162 | MS.gene34008:CDS |
| ATCTCCCTCAAAACCAGAGA+TGG | 0.496573 | 1.4:-74354639 | None:intergenic |
| CATCAAGGCTGTGGAGAAGA+AGG | 0.499167 | 1.4:+74355339 | MS.gene34008:CDS |
| CTGACCATCCTTAGAAATAC+CGG | 0.501461 | 1.4:-74354321 | None:intergenic |
| AGTTTCATCCTATTTGAAGA+AGG | 0.501588 | 1.4:+74354583 | MS.gene34008:CDS |
| ATCATTGATTCCACTACTGG+TGG | 0.502099 | 1.4:+74354290 | MS.gene34008:CDS |
| GAGGTGTGGCAGTCAAGAAC+AGG | 0.504238 | 1.4:-74355103 | None:intergenic |
| CTTCAGTTGTCAGTCCAGTA+GGG | 0.506099 | 1.4:-74354871 | None:intergenic |
| AATTTCATCATATCTACCCT+TGG | 0.508007 | 1.4:-74354552 | None:intergenic |
| AATGACAGTGCAGTAGTACT+TGG | 0.509426 | 1.4:-74354195 | None:intergenic |
| CTCTTAAGTCCAAATGGGTA+AGG | 0.512110 | 1.4:+74353935 | None:intergenic |
| TGAGAACGGCACAATCAGCT+TGG | 0.516820 | 1.4:-74354268 | None:intergenic |
| AGGAATTGGAACTGTGCCTG+TGG | 0.517140 | 1.4:+74354799 | MS.gene34008:CDS |
| GATCACTTGAGATGTAAAGT+TGG | 0.519518 | 1.4:-74355041 | None:intergenic |
| CAGGATGTCTACAAGATTGG+AGG | 0.523217 | 1.4:+74354779 | MS.gene34008:CDS |
| CTTAAGGCTGAACGGGAAAG+AGG | 0.523952 | 1.4:+74354134 | MS.gene34008:CDS |
| GAGCCCAAATTCTTGAAGAA+TGG | 0.528480 | 1.4:+74355196 | MS.gene34008:CDS |
| TCCCACATTGTCACCAGGAA+GGG | 0.528721 | 1.4:-74354933 | None:intergenic |
| AGTCGGAGGGGCTTGTCTGA+AGG | 0.529275 | 1.4:-74354749 | None:intergenic |
| GAGAACGGCACAATCAGCTT+GGG | 0.529995 | 1.4:-74354267 | None:intergenic |
| TGTTGGGGTCATCAAGGCTG+TGG | 0.532596 | 1.4:+74355330 | MS.gene34008:CDS |
| CTTCCAAAGAGCAATGTCAA+TGG | 0.534369 | 1.4:-74354162 | None:intergenic |
| GGAATTGGAACTGTGCCTGT+GGG | 0.536194 | 1.4:+74354800 | MS.gene34008:CDS |
| AGCAAACTTGACAGCAATGT+GGG | 0.543557 | 1.4:-74355125 | None:intergenic |
| TGCACTGTCATTGATGCCCC+CGG | 0.544718 | 1.4:+74354206 | MS.gene34008:CDS |
| CACTTGATCTACAAGCTTGG+AGG | 0.545798 | 1.4:+74354023 | MS.gene34008:CDS |
| TGTGGCTGTTGGGGTCATCA+AGG | 0.547535 | 1.4:+74355324 | MS.gene34008:CDS |
| GTCTGCTTAAGTCCTCCACT+GGG | 0.549538 | 1.4:-74355364 | None:intergenic |
| GGCTTCAAAACCACCAGTAG+TGG | 0.551737 | 1.4:-74354300 | None:intergenic |
| GGTCACTTGATCTACAAGCT+TGG | 0.555547 | 1.4:+74354020 | MS.gene34008:CDS |
| CCAGTCTCGACACGCCCCAC+AGG | 0.557031 | 1.4:-74354815 | None:intergenic |
| TCAAGGGCCTCAAGAAGGGT+TGG | 0.557590 | 1.4:-74354704 | None:intergenic |
| TCAACCACCATGGGCTTGGT+GGG | 0.557624 | 1.4:-74355244 | None:intergenic |
| TTGGTCAAGGGCCTCAAGAA+GGG | 0.558003 | 1.4:-74354708 | None:intergenic |
| TTGGACCCTTGTACCAGTCA+AGG | 0.558366 | 1.4:-74354685 | None:intergenic |
| AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 1.4:-74354346 | None:intergenic |
| TCATTGGCCATGTCGACTCT+GGG | 0.559180 | 1.4:+74353982 | MS.gene34008:CDS |
| TTTGGTCAAGGGCCTCAAGA+AGG | 0.560467 | 1.4:-74354709 | None:intergenic |
| TTCTTGAAGAATGGTGATGC+TGG | 0.561159 | 1.4:+74355205 | MS.gene34008:CDS |
| GAAGCCGGTATTTCTAAGGA+TGG | 0.564413 | 1.4:+74354317 | MS.gene34008:CDS |
| TCTGGGAAATCAACCACCAC+TGG | 0.564990 | 1.4:+74353999 | MS.gene34008:CDS |
| ACAAACCTTGACTGGTACAA+GGG | 0.567625 | 1.4:+74354680 | MS.gene34008:CDS |
| TAATGAAATCCCTGTGTCCG+GGG | 0.570266 | 1.4:-74354223 | None:intergenic |
| ATGCGTCAAACTGTGGCTGT+TGG | 0.571110 | 1.4:+74355313 | MS.gene34008:CDS |
| TTCATTAAGAACATGATCAC+CGG | 0.572337 | 1.4:+74354239 | MS.gene34008:CDS |
| AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 1.4:-74354345 | None:intergenic |
| CTTAAGCTTGTCAAGGACCC+AGG | 0.575518 | 1.4:-74354117 | None:intergenic |
| GAGAAAGTCTCAACCACCAT+GGG | 0.575954 | 1.4:-74355253 | None:intergenic |
| ATCCTGAAGTGGTAGTCGGA+GGG | 0.576252 | 1.4:-74354762 | None:intergenic |
| AGCGCTCTACAAACCTTGAC+TGG | 0.578233 | 1.4:+74354672 | MS.gene34008:CDS |
| TATCTACCCTTGGAGTACTT+GGG | 0.580849 | 1.4:-74354542 | None:intergenic |
| GCGTCAAACTGTGGCTGTTG+GGG | 0.582443 | 1.4:+74355315 | MS.gene34008:CDS |
| ATCCCACATTGTCACCAGGA+AGG | 0.585536 | 1.4:-74354934 | None:intergenic |
| GAGACTGGTGTCATAAAACC+TGG | 0.585699 | 1.4:+74354830 | MS.gene34008:CDS |
| AGTTGGCAGATTCCTTGGCT+GGG | 0.586600 | 1.4:-74355024 | None:intergenic |
| GGCCCTTCCTGGTGACAATG+TGG | 0.586985 | 1.4:+74354931 | MS.gene34008:CDS |
| TTGATTTCCCAGAGTCGACA+TGG | 0.588973 | 1.4:-74353989 | None:intergenic |
| CTGTTAAGGATCTCAAGCGT+GGG | 0.589274 | 1.4:+74354975 | MS.gene34008:CDS |
| TTCTCTGAATATCCTCCACT+CGG | 0.591172 | 1.4:+74355271 | MS.gene34008:CDS |
| GCCCTTCCTGGTGACAATGT+GGG | 0.592402 | 1.4:+74354932 | MS.gene34008:CDS |
| TTGACAAGCTTAAGGCTGAA+CGG | 0.594016 | 1.4:+74354126 | MS.gene34008:CDS |
| CTCCAAGGATGACCCAGCCA+AGG | 0.595225 | 1.4:+74355012 | MS.gene34008:CDS |
| TAGATATGATGAAATTGTGA+AGG | 0.599770 | 1.4:+74354559 | MS.gene34008:CDS |
| GCATGTCTCTAACAGCAAAA+CGG | 0.600985 | 1.4:-74355294 | None:intergenic |
| GCGTTCATTCAAGTATGCCT+GGG | 0.605879 | 1.4:+74354100 | MS.gene34008:CDS |
| GATGATTCCCACCAAGCCCA+TGG | 0.606444 | 1.4:+74355237 | MS.gene34008:CDS |
| TCTCCCTCAAAACCAGAGAT+GGG | 0.607478 | 1.4:-74354638 | None:intergenic |
| TCCTGAAGTGGTAGTCGGAG+GGG | 0.608492 | 1.4:-74354761 | None:intergenic |
| TACTACACCCAAGTACTCCA+AGG | 0.613862 | 1.4:+74354535 | MS.gene34008:CDS |
| GTTCAGCCTTAAGCTTGTCA+AGG | 0.618150 | 1.4:-74354124 | None:intergenic |
| CAAGGGTCCAACCCTTCTTG+AGG | 0.620566 | 1.4:+74354697 | MS.gene34008:CDS |
| TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 1.4:-74354361 | None:intergenic |
| ATCTTGTAGACATCCTGAAG+TGG | 0.621388 | 1.4:-74354773 | None:intergenic |
| GCTGTTAAGGATCTCAAGCG+TGG | 0.622485 | 1.4:+74354974 | MS.gene34008:CDS |
| TTCAGTTGTCAGTCCAGTAG+GGG | 0.622733 | 1.4:-74354870 | None:intergenic |
| AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 1.4:-74355075 | None:intergenic |
| GACAACTGAAGTCAAGTCTG+TGG | 0.624055 | 1.4:+74354883 | MS.gene34008:CDS |
| ACAGCAAAACGGCCGAGTGG+AGG | 0.624787 | 1.4:-74355283 | None:intergenic |
| TTGACAAGCGTGTCATCGAG+AGG | 0.625348 | 1.4:+74354048 | MS.gene34008:CDS |
| TGGTGTCATAAAACCTGGAA+TGG | 0.625384 | 1.4:+74354835 | MS.gene34008:CDS |
| GTATGTTGCCTCAAACTCCA+AGG | 0.633897 | 1.4:+74354997 | MS.gene34008:CDS |
| CATCCTGAAGTGGTAGTCGG+AGG | 0.637451 | 1.4:-74354763 | None:intergenic |
| AGACATCCTGAAGTGGTAGT+CGG | 0.638051 | 1.4:-74354766 | None:intergenic |
| CAGCAAACTTGACAGCAATG+TGG | 0.640811 | 1.4:-74355126 | None:intergenic |
| AGAGAAAGTCTCAACCACCA+TGG | 0.641605 | 1.4:-74355254 | None:intergenic |
| TTCTGGTAAGGAGATTGAGA+AGG | 0.643722 | 1.4:+74355174 | MS.gene34008:CDS |
| GAATTGGAACTGTGCCTGTG+GGG | 0.644316 | 1.4:+74354801 | MS.gene34008:CDS |
| AGTGGAATCAATGATGAGAA+CGG | 0.644693 | 1.4:-74354282 | None:intergenic |
| TGACAGCAATGTGGGAGGTG+TGG | 0.650950 | 1.4:-74355117 | None:intergenic |
| TTAAATCCCACATTGTCACC+AGG | 0.657091 | 1.4:-74354938 | None:intergenic |
| AATGATCTGCTGTTGCAACA+AGG | 0.659392 | 1.4:+74354388 | MS.gene34008:CDS |
| AATGAAATCCCTGTGTCCGG+GGG | 0.661737 | 1.4:-74354222 | None:intergenic |
| GAGAAGAAGGATCCCAGTGG+AGG | 0.667988 | 1.4:+74355352 | MS.gene34008:CDS |
| AAAGGTTCACATCAACATTG+TGG | 0.675059 | 1.4:+74353959 | MS.gene34008:CDS |
| ACTACACCCAAGTACTCCAA+GGG | 0.678033 | 1.4:+74354536 | MS.gene34008:CDS |
| CTTGTAGATCAAGTGACCAG+TGG | 0.682705 | 1.4:-74354015 | None:intergenic |
| TAGAGACATGCGTCAAACTG+TGG | 0.690315 | 1.4:+74355306 | MS.gene34008:CDS |
| CTAACAGCAAAACGGCCGAG+TGG | 0.692072 | 1.4:-74355286 | None:intergenic |
| AAACTTGACAGCAATGTGGG+AGG | 0.695398 | 1.4:-74355122 | None:intergenic |
| GTAGATCAAGTGACCAGTGG+TGG | 0.699002 | 1.4:-74354012 | None:intergenic |
| GTGATCATAATGAATCACCC+TGG | 0.699056 | 1.4:+74355058 | MS.gene34008:CDS |
| GATTCCCACCAAGCCCATGG+TGG | 0.723849 | 1.4:+74355240 | MS.gene34008:CDS |
| GTGGAGAAGAAGGATCCCAG+TGG | 0.734762 | 1.4:+74355349 | MS.gene34008:CDS |
| GCATCATGAAGCTCTCACAG+AGG | 0.758446 | 1.4:+74354910 | MS.gene34008:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATATACAACTTCAA+GGG | - | chr1.4:74354431-74354450 | None:intergenic | 15.0% |
| !! | TAATAAAATATACAACTTCA+AGG | - | chr1.4:74354432-74354451 | None:intergenic | 15.0% |
| !! | ATAAAATATACAACTTCAAG+GGG | - | chr1.4:74354430-74354449 | None:intergenic | 20.0% |
| ! | TAGATATGATGAAATTGTGA+AGG | + | chr1.4:74354559-74354578 | MS.gene34008:CDS | 25.0% |
| !!! | AACTTGTTACTAAGATTGAT+AGG | + | chr1.4:74355149-74355168 | MS.gene34008:CDS | 25.0% |
| AATTTCATCATATCTACCCT+TGG | - | chr1.4:74354555-74354574 | None:intergenic | 30.0% | |
| AGTTTCATCCTATTTGAAGA+AGG | + | chr1.4:74354583-74354602 | MS.gene34008:CDS | 30.0% | |
| ATCACCATTCTTCAAGAATT+TGG | - | chr1.4:74355203-74355222 | None:intergenic | 30.0% | |
| TCACCATTCTTCAAGAATTT+GGG | - | chr1.4:74355202-74355221 | None:intergenic | 30.0% | |
| TTCATTAAGAACATGATCAC+CGG | + | chr1.4:74354239-74354258 | MS.gene34008:CDS | 30.0% | |
| ! | GAACAAATGGAATTTTGTCT+GGG | - | chr1.4:74354619-74354638 | None:intergenic | 30.0% |
| AAAGGTTCACATCAACATTG+TGG | + | chr1.4:74353959-74353978 | MS.gene34008:CDS | 35.0% | |
| AGTGGAATCAATGATGAGAA+CGG | - | chr1.4:74354285-74354304 | None:intergenic | 35.0% | |
| ATAGCCAACCTTCTTCAAAT+AGG | - | chr1.4:74354594-74354613 | None:intergenic | 35.0% | |
| ATCCATCTGTTCAAGATAGA+TGG | - | chr1.4:74354513-74354532 | None:intergenic | 35.0% | |
| GATCACTTGAGATGTAAAGT+TGG | - | chr1.4:74355044-74355063 | None:intergenic | 35.0% | |
| TCATCCTATTTGAAGAAGGT+TGG | + | chr1.4:74354587-74354606 | MS.gene34008:CDS | 35.0% | |
| ! | GGAACAAATGGAATTTTGTC+TGG | - | chr1.4:74354620-74354639 | None:intergenic | 35.0% |
| ! | TGTCAAGAATGTTGCTGTTA+AGG | + | chr1.4:74354961-74354980 | MS.gene34008:CDS | 35.0% |
| !!! | TTTTGAAGCCGGTATTTCTA+AGG | + | chr1.4:74354313-74354332 | MS.gene34008:CDS | 35.0% |
| AAACCAGAGATGGGAACAAA+TGG | - | chr1.4:74354632-74354651 | None:intergenic | 40.0% | |
| AATGACAGTGCAGTAGTACT+TGG | - | chr1.4:74354198-74354217 | None:intergenic | 40.0% | |
| AATGATCTGCTGTTGCAACA+AGG | + | chr1.4:74354388-74354407 | MS.gene34008:CDS | 40.0% | |
| ACAAACCTTGACTGGTACAA+GGG | + | chr1.4:74354680-74354699 | MS.gene34008:CDS | 40.0% | |
| ACCAAATCAATGAGCCTAAG+AGG | + | chr1.4:74354726-74354745 | MS.gene34008:CDS | 40.0% | |
| ACTAAGATTGATAGGCGTTC+TGG | + | chr1.4:74355157-74355176 | MS.gene34008:CDS | 40.0% | |
| AGCAAACTTGACAGCAATGT+GGG | - | chr1.4:74355128-74355147 | None:intergenic | 40.0% | |
| ATCTTGTAGACATCCTGAAG+TGG | - | chr1.4:74354776-74354795 | None:intergenic | 40.0% | |
| ATTCCATTTGTTCCCATCTC+TGG | + | chr1.4:74354626-74354645 | MS.gene34008:CDS | 40.0% | |
| CACATCAACATTGTGGTCAT+TGG | + | chr1.4:74353966-74353985 | MS.gene34008:CDS | 40.0% | |
| CTGACCATCCTTAGAAATAC+CGG | - | chr1.4:74354324-74354343 | None:intergenic | 40.0% | |
| CTTAATGAAATCCCTGTGTC+CGG | - | chr1.4:74354228-74354247 | None:intergenic | 40.0% | |
| CTTCAGGATGTCTACAAGAT+TGG | + | chr1.4:74354776-74354795 | MS.gene34008:CDS | 40.0% | |
| CTTCCAAAGAGCAATGTCAA+TGG | - | chr1.4:74354165-74354184 | None:intergenic | 40.0% | |
| GAGCCCAAATTCTTGAAGAA+TGG | + | chr1.4:74355196-74355215 | MS.gene34008:CDS | 40.0% | |
| GCATGTCTCTAACAGCAAAA+CGG | - | chr1.4:74355297-74355316 | None:intergenic | 40.0% | |
| GTCTACAAGATTGGAGGAAT+TGG | + | chr1.4:74354785-74354804 | MS.gene34008:CDS | 40.0% | |
| GTGATCATAATGAATCACCC+TGG | + | chr1.4:74355058-74355077 | MS.gene34008:CDS | 40.0% | |
| TACAAACCTTGACTGGTACA+AGG | + | chr1.4:74354679-74354698 | MS.gene34008:CDS | 40.0% | |
| TCACCATTGACATTGCTCTT+TGG | + | chr1.4:74354159-74354178 | MS.gene34008:CDS | 40.0% | |
| TGCCATCTATCTTGAACAGA+TGG | + | chr1.4:74354508-74354527 | MS.gene34008:intron | 40.0% | |
| TGTAAAGTTGGCAGATTCCT+TGG | - | chr1.4:74355032-74355051 | None:intergenic | 40.0% | |
| TTAAATCCCACATTGTCACC+AGG | - | chr1.4:74354941-74354960 | None:intergenic | 40.0% | |
| TTAATGAAATCCCTGTGTCC+GGG | - | chr1.4:74354227-74354246 | None:intergenic | 40.0% | |
| TTCTCTGAATATCCTCCACT+CGG | + | chr1.4:74355271-74355290 | MS.gene34008:CDS | 40.0% | |
| TTCTGGTAAGGAGATTGAGA+AGG | + | chr1.4:74355174-74355193 | MS.gene34008:CDS | 40.0% | |
| TTGACAAGCTTAAGGCTGAA+CGG | + | chr1.4:74354126-74354145 | MS.gene34008:CDS | 40.0% | |
| ! | ATATCTACCCTTGGAGTACT+TGG | - | chr1.4:74354546-74354565 | None:intergenic | 40.0% |
| ! | CTTCTTCTTCAATGCTGACT+TGG | - | chr1.4:74355389-74355408 | None:intergenic | 40.0% |
| ! | TATCTACCCTTGGAGTACTT+GGG | - | chr1.4:74354545-74354564 | None:intergenic | 40.0% |
| ! | TTCTTGAAGAATGGTGATGC+TGG | + | chr1.4:74355205-74355224 | MS.gene34008:CDS | 40.0% |
| !! | AGGCTCATTGATTTGGTCAA+GGG | - | chr1.4:74354723-74354742 | None:intergenic | 40.0% |
| !! | ATCATTGATTCCACTACTGG+TGG | + | chr1.4:74354290-74354309 | MS.gene34008:CDS | 40.0% |
| !! | CTCATCATTGATTCCACTAC+TGG | + | chr1.4:74354287-74354306 | MS.gene34008:CDS | 40.0% |
| !! | TAGGCTCATTGATTTGGTCA+AGG | - | chr1.4:74354724-74354743 | None:intergenic | 40.0% |
| !! | TGGTGTCATAAAACCTGGAA+TGG | + | chr1.4:74354835-74354854 | MS.gene34008:CDS | 40.0% |
| AAACTTGACAGCAATGTGGG+AGG | - | chr1.4:74355125-74355144 | None:intergenic | 45.0% | |
| ACAATCAGCTTGGGATGTTC+CGG | - | chr1.4:74354261-74354280 | None:intergenic | 45.0% | |
| ACTACACCCAAGTACTCCAA+GGG | + | chr1.4:74354536-74354555 | MS.gene34008:CDS | 45.0% | |
| ACTTCAGTTGTCAGTCCAGT+AGG | - | chr1.4:74354875-74354894 | None:intergenic | 45.0% | |
| AGACATCCTGAAGTGGTAGT+CGG | - | chr1.4:74354769-74354788 | None:intergenic | 45.0% | |
| AGAGAAAGTCTCAACCACCA+TGG | - | chr1.4:74355257-74355276 | None:intergenic | 45.0% | |
| AGCGTTCATTCAAGTATGCC+TGG | + | chr1.4:74354099-74354118 | MS.gene34008:CDS | 45.0% | |
| ATCTCCCTCAAAACCAGAGA+TGG | - | chr1.4:74354642-74354661 | None:intergenic | 45.0% | |
| CACTTGATCTACAAGCTTGG+AGG | + | chr1.4:74354023-74354042 | MS.gene34008:CDS | 45.0% | |
| CAGCAAACTTGACAGCAATG+TGG | - | chr1.4:74355129-74355148 | None:intergenic | 45.0% | |
| CAGGATGTCTACAAGATTGG+AGG | + | chr1.4:74354779-74354798 | MS.gene34008:CDS | 45.0% | |
| CTGTTAAGGATCTCAAGCGT+GGG | + | chr1.4:74354975-74354994 | MS.gene34008:CDS | 45.0% | |
| CTTCAGTTGTCAGTCCAGTA+GGG | - | chr1.4:74354874-74354893 | None:intergenic | 45.0% | |
| CTTGTAGATCAAGTGACCAG+TGG | - | chr1.4:74354018-74354037 | None:intergenic | 45.0% | |
| GACAACTGAAGTCAAGTCTG+TGG | + | chr1.4:74354883-74354902 | MS.gene34008:CDS | 45.0% | |
| GAGAAAGTCTCAACCACCAT+GGG | - | chr1.4:74355256-74355275 | None:intergenic | 45.0% | |
| GAGCATAGCCATTTCCAATC+TGG | - | chr1.4:74355084-74355103 | None:intergenic | 45.0% | |
| GATTGATAGGCGTTCTGGTA+AGG | + | chr1.4:74355162-74355181 | MS.gene34008:CDS | 45.0% | |
| GCAAAAGTGACAACCATTCC+AGG | - | chr1.4:74354851-74354870 | None:intergenic | 45.0% | |
| GCGTTCATTCAAGTATGCCT+GGG | + | chr1.4:74354100-74354119 | MS.gene34008:CDS | 45.0% | |
| GGTCACTTGATCTACAAGCT+TGG | + | chr1.4:74354020-74354039 | MS.gene34008:CDS | 45.0% | |
| GTATGTTGCCTCAAACTCCA+AGG | + | chr1.4:74354997-74355016 | MS.gene34008:CDS | 45.0% | |
| GTTCAGCCTTAAGCTTGTCA+AGG | - | chr1.4:74354127-74354146 | None:intergenic | 45.0% | |
| TAATGAAATCCCTGTGTCCG+GGG | - | chr1.4:74354226-74354245 | None:intergenic | 45.0% | |
| TACTACACCCAAGTACTCCA+AGG | + | chr1.4:74354535-74354554 | MS.gene34008:CDS | 45.0% | |
| TAGAGACATGCGTCAAACTG+TGG | + | chr1.4:74355306-74355325 | MS.gene34008:CDS | 45.0% | |
| TCACACCAAGAGTGAAAGCA+AGG | - | chr1.4:74354364-74354383 | None:intergenic | 45.0% | |
| TCTCCCTCAAAACCAGAGAT+GGG | - | chr1.4:74354641-74354660 | None:intergenic | 45.0% | |
| TGACAAGCTTAAGGCTGAAC+GGG | + | chr1.4:74354127-74354146 | MS.gene34008:CDS | 45.0% | |
| TTCAGTTGTCAGTCCAGTAG+GGG | - | chr1.4:74354873-74354892 | None:intergenic | 45.0% | |
| TTGATTTCCCAGAGTCGACA+TGG | - | chr1.4:74353992-74354011 | None:intergenic | 45.0% | |
| ! | AAGCAAGGAGAGCATGTTCA+CGG | - | chr1.4:74354349-74354368 | None:intergenic | 45.0% |
| ! | GAAGCCGGTATTTCTAAGGA+TGG | + | chr1.4:74354317-74354336 | MS.gene34008:CDS | 45.0% |
| ! | GCCTCTTAGGCTCATTGATT+TGG | - | chr1.4:74354730-74354749 | None:intergenic | 45.0% |
| !! | GAGACTGGTGTCATAAAACC+TGG | + | chr1.4:74354830-74354849 | MS.gene34008:CDS | 45.0% |
| !!! | ACTACTGGTGGTTTTGAAGC+CGG | + | chr1.4:74354302-74354321 | MS.gene34008:CDS | 45.0% |
| !!! | GTTCCCATCTCTGGTTTTGA+GGG | + | chr1.4:74354635-74354654 | MS.gene34008:CDS | 45.0% |
| !!! | TGTTCCCATCTCTGGTTTTG+AGG | + | chr1.4:74354634-74354653 | MS.gene34008:CDS | 45.0% |
| AAGTTGGCAGATTCCTTGGC+TGG | - | chr1.4:74355028-74355047 | None:intergenic | 50.0% | |
| AATGAAATCCCTGTGTCCGG+GGG | - | chr1.4:74354225-74354244 | None:intergenic | 50.0% | |
| AGCCATTTCCAATCTGGCCA+GGG | - | chr1.4:74355078-74355097 | None:intergenic | 50.0% | |
| AGCGCTCTACAAACCTTGAC+TGG | + | chr1.4:74354672-74354691 | MS.gene34008:CDS | 50.0% | |
| AGGAATTGGAACTGTGCCTG+TGG | + | chr1.4:74354799-74354818 | MS.gene34008:CDS | 50.0% | |
| AGTTGGCAGATTCCTTGGCT+GGG | - | chr1.4:74355027-74355046 | None:intergenic | 50.0% | |
| ATCCCACATTGTCACCAGGA+AGG | - | chr1.4:74354937-74354956 | None:intergenic | 50.0% | |
| ATCCTGAAGTGGTAGTCGGA+GGG | - | chr1.4:74354765-74354784 | None:intergenic | 50.0% | |
| ATGAATCACCCTGGCCAGAT+TGG | + | chr1.4:74355067-74355086 | MS.gene34008:CDS | 50.0% | |
| ATGCGTCAAACTGTGGCTGT+TGG | + | chr1.4:74355313-74355332 | MS.gene34008:CDS | 50.0% | |
| CATCAAGGCTGTGGAGAAGA+AGG | + | chr1.4:74355339-74355358 | MS.gene34008:CDS | 50.0% | |
| CTGGGTCCTTGACAAGCTTA+AGG | + | chr1.4:74354118-74354137 | MS.gene34008:CDS | 50.0% | |
| CTTAAGCTTGTCAAGGACCC+AGG | - | chr1.4:74354120-74354139 | None:intergenic | 50.0% | |
| CTTAAGGCTGAACGGGAAAG+AGG | + | chr1.4:74354134-74354153 | MS.gene34008:CDS | 50.0% | |
| GAATTGGAACTGTGCCTGTG+GGG | + | chr1.4:74354801-74354820 | MS.gene34008:CDS | 50.0% | |
| GAGAACGGCACAATCAGCTT+GGG | - | chr1.4:74354270-74354289 | None:intergenic | 50.0% | |
| GCATCATGAAGCTCTCACAG+AGG | + | chr1.4:74354910-74354929 | MS.gene34008:CDS | 50.0% | |
| GCTCTCCTTGCTTTCACTCT+TGG | + | chr1.4:74354356-74354375 | MS.gene34008:CDS | 50.0% | |
| GCTGTTAAGGATCTCAAGCG+TGG | + | chr1.4:74354974-74354993 | MS.gene34008:CDS | 50.0% | |
| GGAATTGGAACTGTGCCTGT+GGG | + | chr1.4:74354800-74354819 | MS.gene34008:CDS | 50.0% | |
| GGCTTCAAAACCACCAGTAG+TGG | - | chr1.4:74354303-74354322 | None:intergenic | 50.0% | |
| GTAGATCAAGTGACCAGTGG+TGG | - | chr1.4:74354015-74354034 | None:intergenic | 50.0% | |
| GTCTGCTTAAGTCCTCCACT+GGG | - | chr1.4:74355367-74355386 | None:intergenic | 50.0% | |
| TAGCCATTTCCAATCTGGCC+AGG | - | chr1.4:74355079-74355098 | None:intergenic | 50.0% | |
| TCCCACATTGTCACCAGGAA+GGG | - | chr1.4:74354936-74354955 | None:intergenic | 50.0% | |
| TCTGGGAAATCAACCACCAC+TGG | + | chr1.4:74353999-74354018 | MS.gene34008:CDS | 50.0% | |
| TGAGAACGGCACAATCAGCT+TGG | - | chr1.4:74354271-74354290 | None:intergenic | 50.0% | |
| TGCGTCAAACTGTGGCTGTT+GGG | + | chr1.4:74355314-74355333 | MS.gene34008:CDS | 50.0% | |
| TGGGTCATCCTTGGAGTTTG+AGG | - | chr1.4:74355008-74355027 | None:intergenic | 50.0% | |
| TTGACAAGCGTGTCATCGAG+AGG | + | chr1.4:74354048-74354067 | MS.gene34008:CDS | 50.0% | |
| TTGGACCCTTGTACCAGTCA+AGG | - | chr1.4:74354688-74354707 | None:intergenic | 50.0% | |
| TTGGTCAAGGGCCTCAAGAA+GGG | - | chr1.4:74354711-74354730 | None:intergenic | 50.0% | |
| TTTGGTCAAGGGCCTCAAGA+AGG | - | chr1.4:74354712-74354731 | None:intergenic | 50.0% | |
| ! | AGCAAGGAGAGCATGTTCAC+GGG | - | chr1.4:74354348-74354367 | None:intergenic | 50.0% |
| !! | TCATTGGCCATGTCGACTCT+GGG | + | chr1.4:74353982-74354001 | MS.gene34008:CDS | 50.0% |
| !!! | GTTGTCACTTTTGCCCCTAC+TGG | + | chr1.4:74354857-74354876 | MS.gene34008:CDS | 50.0% |
| AGTCTCAACCACCATGGGCT+TGG | - | chr1.4:74355251-74355270 | None:intergenic | 55.0% | |
| CAAGGGTCCAACCCTTCTTG+AGG | + | chr1.4:74354697-74354716 | MS.gene34008:CDS | 55.0% | |
| CACCCTGGCCAGATTGGAAA+TGG | + | chr1.4:74355073-74355092 | MS.gene34008:CDS | 55.0% | |
| CATCCTGAAGTGGTAGTCGG+AGG | - | chr1.4:74354766-74354785 | None:intergenic | 55.0% | |
| CTAACAGCAAAACGGCCGAG+TGG | - | chr1.4:74355289-74355308 | None:intergenic | 55.0% | |
| GAGAAGAAGGATCCCAGTGG+AGG | + | chr1.4:74355352-74355371 | MS.gene34008:CDS | 55.0% | |
| GAGGTGTGGCAGTCAAGAAC+AGG | - | chr1.4:74355106-74355125 | None:intergenic | 55.0% | |
| GATGATTCCCACCAAGCCCA+TGG | + | chr1.4:74355237-74355256 | MS.gene34008:CDS | 55.0% | |
| GCCCTTCCTGGTGACAATGT+GGG | + | chr1.4:74354932-74354951 | MS.gene34008:CDS | 55.0% | |
| GCGTCAAACTGTGGCTGTTG+GGG | + | chr1.4:74355315-74355334 | MS.gene34008:CDS | 55.0% | |
| GGCTTGTCTGAAGGCCTCTT+AGG | - | chr1.4:74354743-74354762 | None:intergenic | 55.0% | |
| GGTCTGCTTAAGTCCTCCAC+TGG | - | chr1.4:74355368-74355387 | None:intergenic | 55.0% | |
| GTGGAGAAGAAGGATCCCAG+TGG | + | chr1.4:74355349-74355368 | MS.gene34008:CDS | 55.0% | |
| TCAAGGGCCTCAAGAAGGGT+TGG | - | chr1.4:74354707-74354726 | None:intergenic | 55.0% | |
| TCCTGAAGTGGTAGTCGGAG+GGG | - | chr1.4:74354764-74354783 | None:intergenic | 55.0% | |
| TGACAGCAATGTGGGAGGTG+TGG | - | chr1.4:74355120-74355139 | None:intergenic | 55.0% | |
| TGCACTGTCATTGATGCCCC+CGG | + | chr1.4:74354206-74354225 | MS.gene34008:CDS | 55.0% | |
| TGTGGCTGTTGGGGTCATCA+AGG | + | chr1.4:74355324-74355343 | MS.gene34008:CDS | 55.0% | |
| TGTTGGGGTCATCAAGGCTG+TGG | + | chr1.4:74355330-74355349 | MS.gene34008:CDS | 55.0% | |
| TTCCTTGGCTGGGTCATCCT+TGG | - | chr1.4:74355017-74355036 | None:intergenic | 55.0% | |
| ! | TCAACCACCATGGGCTTGGT+GGG | - | chr1.4:74355247-74355266 | None:intergenic | 55.0% |
| !! | GTCATTGGCCATGTCGACTC+TGG | + | chr1.4:74353981-74354000 | MS.gene34008:CDS | 55.0% |
| ACAGCAAAACGGCCGAGTGG+AGG | - | chr1.4:74355286-74355305 | None:intergenic | 60.0% | |
| AGTCGGAGGGGCTTGTCTGA+AGG | - | chr1.4:74354752-74354771 | None:intergenic | 60.0% | |
| CATTGATGCCCCCGGACACA+GGG | + | chr1.4:74354214-74354233 | MS.gene34008:CDS | 60.0% | |
| CTCAACCACCATGGGCTTGG+TGG | - | chr1.4:74355248-74355267 | None:intergenic | 60.0% | |
| CTCCAAGGATGACCCAGCCA+AGG | + | chr1.4:74355012-74355031 | MS.gene34008:CDS | 60.0% | |
| GATTCCCACCAAGCCCATGG+TGG | + | chr1.4:74355240-74355259 | MS.gene34008:CDS | 60.0% | |
| GGCCCTTCCTGGTGACAATG+TGG | + | chr1.4:74354931-74354950 | MS.gene34008:CDS | 60.0% | |
| TCATTGATGCCCCCGGACAC+AGG | + | chr1.4:74354213-74354232 | MS.gene34008:CDS | 60.0% | |
| GCCCCTCCGACTACCACTTC+AGG | + | chr1.4:74354760-74354779 | MS.gene34008:CDS | 65.0% | |
| GCTCTCACAGAGGCCCTTCC+TGG | + | chr1.4:74354920-74354939 | MS.gene34008:CDS | 65.0% | |
| CCAGTCTCGACACGCCCCAC+AGG | - | chr1.4:74354818-74354837 | None:intergenic | 70.0% | |
| CCTGTGGGGCGTGTCGAGAC+TGG | + | chr1.4:74354815-74354834 | MS.gene34008:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 74353948 | 74355411 | 74353948 | ID=MS.gene34008 |
| chr1.4 | mRNA | 74353948 | 74355411 | 74353948 | ID=MS.gene34008.t1;Parent=MS.gene34008 |
| chr1.4 | exon | 74353948 | 74354409 | 74353948 | ID=MS.gene34008.t1.exon1;Parent=MS.gene34008.t1 |
| chr1.4 | CDS | 74353948 | 74354409 | 74353948 | ID=cds.MS.gene34008.t1;Parent=MS.gene34008.t1 |
| chr1.4 | exon | 74354527 | 74355411 | 74354527 | ID=MS.gene34008.t1.exon2;Parent=MS.gene34008.t1 |
| chr1.4 | CDS | 74354527 | 74355411 | 74354527 | ID=cds.MS.gene34008.t1;Parent=MS.gene34008.t1 |
| Gene Sequence |
| Protein sequence |