Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074184.t1 | XP_003618775.2 | 100 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 1.70E-258 | 901.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074184.t1 | O64937 | 96.9 | 447 | 14 | 0 | 1 | 447 | 1 | 447 | 1.2e-255 | 883.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074184.t1 | G7KN61 | 100.0 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 1.2e-258 | 901.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene074184 | -0.801803 | 7.58E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene074184 | -0.803994 | 2.67E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene074184 | -0.823259 | 1.52E-53 | -1.69E-46 |
| MS.gene049435 | MS.gene074184 | -0.834388 | 3.09E-56 | -1.69E-46 |
| MS.gene049452 | MS.gene074184 | -0.813067 | 3.09E-51 | -1.69E-46 |
| MS.gene049669 | MS.gene074184 | -0.836361 | 9.79E-57 | -1.69E-46 |
| MS.gene050105 | MS.gene074184 | -0.808592 | 2.87E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene074184 | -0.836755 | 7.77E-57 | -1.69E-46 |
| MS.gene050605 | MS.gene074184 | -0.801206 | 1.00E-48 | -1.69E-46 |
| MS.gene050680 | MS.gene074184 | -0.857122 | 2.02E-62 | -1.69E-46 |
| MS.gene050750 | MS.gene074184 | -0.849407 | 3.30E-60 | -1.69E-46 |
| MS.gene050826 | MS.gene074184 | -0.833422 | 5.38E-56 | -1.69E-46 |
| MS.gene050905 | MS.gene074184 | 0.808472 | 3.05E-50 | -1.69E-46 |
| MS.gene050953 | MS.gene074184 | -0.850064 | 2.16E-60 | -1.69E-46 |
| MS.gene051147 | MS.gene074184 | -0.803035 | 4.22E-49 | -1.69E-46 |
| MS.gene051190 | MS.gene074184 | -0.802597 | 5.20E-49 | -1.69E-46 |
| MS.gene051368 | MS.gene074184 | -0.844092 | 9.36E-59 | -1.69E-46 |
| MS.gene051924 | MS.gene074184 | 0.895247 | 1.15E-75 | -1.69E-46 |
| MS.gene051926 | MS.gene074184 | 0.911968 | 3.33E-83 | -1.69E-46 |
| MS.gene052190 | MS.gene074184 | -0.835021 | 2.14E-56 | -1.69E-46 |
| MS.gene052333 | MS.gene074184 | -0.857038 | 2.14E-62 | -1.69E-46 |
| MS.gene052426 | MS.gene074184 | -0.826806 | 2.22E-54 | -1.69E-46 |
| MS.gene052519 | MS.gene074184 | -0.80764 | 4.58E-50 | -1.69E-46 |
| MS.gene052586 | MS.gene074184 | -0.804554 | 2.04E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene074184 | -0.850691 | 1.44E-60 | -1.69E-46 |
| MS.gene052675 | MS.gene074184 | -0.850899 | 1.26E-60 | -1.69E-46 |
| MS.gene052677 | MS.gene074184 | -0.856864 | 2.41E-62 | -1.69E-46 |
| MS.gene052863 | MS.gene074184 | -0.813219 | 2.86E-51 | -1.69E-46 |
| MS.gene052965 | MS.gene074184 | 0.841655 | 4.17E-58 | -1.69E-46 |
| MS.gene053006 | MS.gene074184 | -0.812827 | 3.48E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene074184 | -0.812081 | 5.07E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene074184 | -0.872034 | 4.34E-67 | -1.69E-46 |
| MS.gene053201 | MS.gene074184 | -0.809799 | 1.58E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene074184 | -0.823672 | 1.22E-53 | -1.69E-46 |
| MS.gene05415 | MS.gene074184 | -0.858767 | 6.57E-63 | -1.69E-46 |
| MS.gene054236 | MS.gene074184 | -0.820238 | 7.62E-53 | -1.69E-46 |
| MS.gene054291 | MS.gene074184 | 0.85868 | 6.98E-63 | -1.69E-46 |
| MS.gene054405 | MS.gene074184 | -0.845908 | 3.03E-59 | -1.69E-46 |
| MS.gene054467 | MS.gene074184 | -0.818012 | 2.45E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene074184 | -0.855172 | 7.54E-62 | -1.69E-46 |
| MS.gene054559 | MS.gene074184 | -0.846471 | 2.13E-59 | -1.69E-46 |
| MS.gene054657 | MS.gene074184 | -0.813333 | 2.70E-51 | -1.69E-46 |
| MS.gene054994 | MS.gene074184 | -0.802897 | 4.51E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene074184 | -0.834617 | 2.70E-56 | -1.69E-46 |
| MS.gene055227 | MS.gene074184 | -0.819709 | 1.01E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene074184 | -0.802985 | 4.33E-49 | -1.69E-46 |
| MS.gene055230 | MS.gene074184 | -0.813774 | 2.16E-51 | -1.69E-46 |
| MS.gene055356 | MS.gene074184 | -0.83434 | 3.17E-56 | -1.69E-46 |
| MS.gene055358 | MS.gene074184 | -0.833535 | 5.04E-56 | -1.69E-46 |
| MS.gene055367 | MS.gene074184 | -0.813597 | 2.36E-51 | -1.69E-46 |
| MS.gene055453 | MS.gene074184 | 0.839346 | 1.67E-57 | -1.69E-46 |
| MS.gene055455 | MS.gene074184 | 0.82418 | 9.28E-54 | -1.69E-46 |
| MS.gene055623 | MS.gene074184 | -0.802809 | 4.70E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene074184 | -0.893954 | 3.88E-75 | -1.69E-46 |
| MS.gene055818 | MS.gene074184 | -0.849499 | 3.11E-60 | -1.69E-46 |
| MS.gene055926 | MS.gene074184 | -0.829253 | 5.71E-55 | -1.69E-46 |
| MS.gene05604 | MS.gene074184 | -0.819633 | 1.05E-52 | -1.69E-46 |
| MS.gene056162 | MS.gene074184 | -0.819093 | 1.39E-52 | -1.69E-46 |
| MS.gene056480 | MS.gene074184 | -0.83749 | 5.04E-57 | -1.69E-46 |
| MS.gene056506 | MS.gene074184 | -0.83958 | 1.46E-57 | -1.69E-46 |
| MS.gene056779 | MS.gene074184 | -0.817767 | 2.78E-52 | -1.69E-46 |
| MS.gene056873 | MS.gene074184 | -0.830814 | 2.38E-55 | -1.69E-46 |
| MS.gene057026 | MS.gene074184 | -0.846452 | 2.15E-59 | -1.69E-46 |
| MS.gene057060 | MS.gene074184 | -0.816768 | 4.66E-52 | -1.69E-46 |
| MS.gene057156 | MS.gene074184 | 0.899094 | 2.79E-77 | -1.69E-46 |
| MS.gene057208 | MS.gene074184 | -0.824449 | 8.02E-54 | -1.69E-46 |
| MS.gene057598 | MS.gene074184 | -0.803369 | 3.60E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene074184 | -0.812163 | 4.87E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene074184 | -0.806966 | 6.36E-50 | -1.69E-46 |
| MS.gene057855 | MS.gene074184 | -0.803099 | 4.10E-49 | -1.69E-46 |
| MS.gene058146 | MS.gene074184 | -0.814919 | 1.21E-51 | -1.69E-46 |
| MS.gene058223 | MS.gene074184 | 0.803569 | 3.27E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene074184 | -0.802591 | 5.22E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene074184 | -0.827399 | 1.60E-54 | -1.69E-46 |
| MS.gene059160 | MS.gene074184 | -0.812885 | 3.38E-51 | -1.69E-46 |
| MS.gene059161 | MS.gene074184 | -0.889398 | 2.51E-73 | -1.69E-46 |
| MS.gene059162 | MS.gene074184 | -0.826309 | 2.91E-54 | -1.69E-46 |
| MS.gene059584 | MS.gene074184 | -0.803905 | 2.79E-49 | -1.69E-46 |
| MS.gene059607 | MS.gene074184 | -0.809201 | 2.13E-50 | -1.69E-46 |
| MS.gene059609 | MS.gene074184 | -0.831602 | 1.52E-55 | -1.69E-46 |
| MS.gene060011 | MS.gene074184 | -0.821089 | 4.86E-53 | -1.69E-46 |
| MS.gene060137 | MS.gene074184 | 0.825865 | 3.71E-54 | -1.69E-46 |
| MS.gene060322 | MS.gene074184 | -0.88833 | 6.50E-73 | -1.69E-46 |
| MS.gene06052 | MS.gene074184 | -0.849189 | 3.79E-60 | -1.69E-46 |
| MS.gene060634 | MS.gene074184 | 0.814323 | 1.63E-51 | -1.69E-46 |
| MS.gene060683 | MS.gene074184 | -0.832719 | 8.05E-56 | -1.69E-46 |
| MS.gene060685 | MS.gene074184 | -0.835524 | 1.60E-56 | -1.69E-46 |
| MS.gene060802 | MS.gene074184 | -0.842135 | 3.11E-58 | -1.69E-46 |
| MS.gene060803 | MS.gene074184 | -0.820268 | 7.50E-53 | -1.69E-46 |
| MS.gene060851 | MS.gene074184 | -0.804528 | 2.07E-49 | -1.69E-46 |
| MS.gene060852 | MS.gene074184 | -0.802252 | 6.13E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene074184 | -0.810894 | 9.19E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene074184 | 0.821163 | 4.67E-53 | -1.69E-46 |
| MS.gene061114 | MS.gene074184 | 0.834813 | 2.41E-56 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074184.t1 | MTR_6g021800 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
| MS.gene074184.t1 | MTR_6g021805 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
| MS.gene074184.t1 | MTR_1g495705 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| MS.gene074184.t1 | MTR_1g095650 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| MS.gene074184.t1 | MTR_1g095703 | 96.429 | 448 | 15 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| MS.gene074184.t1 | MTR_4g014810 | 95.302 | 447 | 21 | 0 | 1 | 447 | 1 | 447 | 0.0 | 891 |
| MS.gene074184.t1 | MTR_1g013680 | 95.227 | 440 | 18 | 1 | 1 | 437 | 1 | 440 | 0.0 | 865 |
| MS.gene074184.t1 | MTR_1g085410 | 81.336 | 434 | 81 | 0 | 1 | 434 | 1 | 434 | 0.0 | 739 |
| MS.gene074184.t1 | MTR_1g101870 | 80.182 | 439 | 82 | 3 | 1 | 439 | 1 | 434 | 0.0 | 726 |
| MS.gene074184.t1 | MTR_1g101870 | 80.182 | 439 | 82 | 3 | 1 | 439 | 1 | 434 | 0.0 | 724 |
| MS.gene074184.t1 | MTR_1g024175 | 78.802 | 434 | 92 | 0 | 1 | 434 | 1 | 434 | 0.0 | 724 |
| MS.gene074184.t1 | MTR_8g014590 | 77.951 | 449 | 96 | 2 | 1 | 446 | 1 | 449 | 0.0 | 713 |
| MS.gene074184.t1 | MTR_1g095650 | 95.965 | 347 | 13 | 1 | 102 | 447 | 1 | 347 | 0.0 | 688 |
| MS.gene074184.t1 | MTR_2g082730 | 70.682 | 440 | 112 | 2 | 1 | 438 | 1 | 425 | 0.0 | 639 |
| MS.gene074184.t1 | MTR_5g037350 | 66.383 | 470 | 121 | 1 | 3 | 435 | 13 | 482 | 0.0 | 629 |
| MS.gene074184.t1 | MTR_1g089520 | 69.406 | 438 | 116 | 3 | 4 | 440 | 5 | 425 | 0.0 | 623 |
| MS.gene074184.t1 | MTR_2g082665 | 65.682 | 440 | 108 | 2 | 1 | 438 | 1 | 399 | 0.0 | 581 |
| MS.gene074184.t1 | MTR_2g037420 | 63.053 | 452 | 121 | 4 | 1 | 447 | 1 | 411 | 0.0 | 558 |
| MS.gene074184.t1 | MTR_2g080210 | 64.368 | 435 | 119 | 4 | 1 | 432 | 1 | 402 | 0.0 | 549 |
| MS.gene074184.t1 | MTR_8g013910 | 63.029 | 449 | 131 | 5 | 1 | 433 | 1 | 430 | 0.0 | 546 |
| MS.gene074184.t1 | MTR_8g008740 | 78.154 | 325 | 70 | 1 | 1 | 324 | 1 | 325 | 0.0 | 538 |
| MS.gene074184.t1 | MTR_1g112460 | 64.094 | 298 | 65 | 4 | 155 | 446 | 1 | 262 | 3.93e-124 | 362 |
| MS.gene074184.t1 | MTR_1g495735 | 74.129 | 201 | 42 | 1 | 240 | 430 | 106 | 306 | 3.35e-99 | 299 |
| MS.gene074184.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 4.80e-17 | 82.0 |
| MS.gene074184.t1 | MTR_6g080420 | 37.731 | 432 | 255 | 6 | 5 | 428 | 89 | 514 | 1.21e-96 | 300 |
| MS.gene074184.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 49 | 476 | 1.45e-93 | 291 |
| MS.gene074184.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 43 | 470 | 2.18e-93 | 290 |
| MS.gene074184.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 70 | 497 | 4.03e-93 | 290 |
| MS.gene074184.t1 | MTR_8g087950 | 35.566 | 433 | 270 | 6 | 7 | 433 | 275 | 704 | 2.05e-90 | 289 |
| MS.gene074184.t1 | MTR_8g087950 | 35.566 | 433 | 270 | 6 | 7 | 433 | 348 | 777 | 1.09e-89 | 289 |
| MS.gene074184.t1 | MTR_1g101880 | 86.364 | 154 | 21 | 0 | 1 | 154 | 1 | 154 | 1.19e-89 | 273 |
| MS.gene074184.t1 | MTR_4g054970 | 55.372 | 242 | 79 | 4 | 193 | 431 | 50 | 265 | 2.03e-79 | 248 |
| MS.gene074184.t1 | MTR_4g054970 | 77.273 | 44 | 10 | 0 | 1 | 44 | 1 | 44 | 4.58e-13 | 69.7 |
| MS.gene074184.t1 | MTR_1g024165 | 81.884 | 138 | 25 | 0 | 8 | 145 | 12 | 149 | 1.95e-78 | 240 |
| MS.gene074184.t1 | MTR_8g014950 | 75.490 | 102 | 25 | 0 | 3 | 104 | 4 | 105 | 2.57e-47 | 158 |
| MS.gene074184.t1 | MTR_7g094460 | 30.227 | 440 | 243 | 14 | 3 | 429 | 59 | 447 | 1.67e-45 | 164 |
| MS.gene074184.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 1.17e-42 | 149 |
| MS.gene074184.t1 | MTR_3g076660 | 30.631 | 444 | 247 | 15 | 3 | 429 | 88 | 487 | 5.23e-42 | 155 |
| MS.gene074184.t1 | MTR_2g021300 | 29.385 | 439 | 248 | 12 | 3 | 429 | 46 | 434 | 1.09e-41 | 153 |
| MS.gene074184.t1 | MTR_8g014960 | 62.195 | 82 | 31 | 0 | 213 | 294 | 2 | 83 | 2.88e-27 | 107 |
| MS.gene074184.t1 | MTR_3g097250 | 26.103 | 272 | 144 | 9 | 9 | 272 | 85 | 307 | 2.92e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074184.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074184.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074184.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074184.t1 | AT1G07920 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074184.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074184.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074184.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074184.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074184.t1 | AT1G07930 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074184.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
| MS.gene074184.t1 | AT1G07930 | 90.517 | 116 | 11 | 0 | 331 | 446 | 254 | 369 | 1.79e-68 | 223 |
| MS.gene074184.t1 | AT1G18070 | 37.412 | 425 | 258 | 5 | 5 | 424 | 99 | 520 | 6.59e-94 | 293 |
| MS.gene074184.t1 | AT1G18070 | 37.412 | 425 | 258 | 5 | 5 | 424 | 99 | 520 | 6.59e-94 | 293 |
| MS.gene074184.t1 | AT1G18070 | 36.697 | 436 | 257 | 6 | 5 | 424 | 99 | 531 | 1.04e-90 | 285 |
| MS.gene074184.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 1.84e-90 | 288 |
| MS.gene074184.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.88e-90 | 288 |
| MS.gene074184.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.88e-90 | 288 |
| MS.gene074184.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 9.81e-90 | 288 |
| MS.gene074184.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 1.10e-89 | 288 |
| MS.gene074184.t1 | AT1G35550 | 77.885 | 104 | 23 | 0 | 335 | 438 | 1 | 104 | 5.60e-54 | 176 |
| MS.gene074184.t1 | AT4G20360 | 30.594 | 438 | 255 | 10 | 3 | 429 | 75 | 474 | 1.27e-44 | 162 |
| MS.gene074184.t1 | AT4G20360 | 30.594 | 438 | 255 | 10 | 3 | 429 | 75 | 474 | 1.27e-44 | 162 |
| MS.gene074184.t1 | AT4G02930 | 29.977 | 437 | 249 | 13 | 3 | 429 | 63 | 452 | 2.02e-44 | 161 |
| MS.gene074184.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 1.60e-12 | 70.1 |
| MS.gene074184.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 2.25e-11 | 66.6 |
| MS.gene074184.t1 | AT5G08650 | 27.037 | 270 | 144 | 10 | 9 | 272 | 88 | 310 | 2.46e-11 | 66.2 |
| MS.gene074184.t1 | AT5G08650 | 27.037 | 270 | 144 | 10 | 9 | 272 | 88 | 310 | 2.73e-11 | 66.2 |
Find 134 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCGGTATGGTTGTGACTTT+TGG | 0.205642 | 6.1:+5377183 | MS.gene074184:CDS |
| GGGCTTGTCTGTGGGTCTCT+TGG | 0.228126 | 6.1:-5377076 | None:intergenic |
| CTTCTTCTTGGCAGCAGCTT+TGG | 0.247525 | 6.1:-5377718 | None:intergenic |
| GGCTTGTCTGTGGGTCTCTT+GGG | 0.275199 | 6.1:-5377075 | None:intergenic |
| GGAGGGAGATCACTTCTTCT+TGG | 0.339899 | 6.1:-5377730 | None:intergenic |
| GCTCTCACTGAAGCTCTTCC+AGG | 0.343392 | 6.1:+5377255 | MS.gene074184:CDS |
| TTGCAAGATGTTTACAAGAT+TGG | 0.346171 | 6.1:+5377111 | MS.gene074184:CDS |
| TTCATCAAGAACATGATTAC+TGG | 0.350652 | 6.1:+5376595 | MS.gene074184:CDS |
| GTCTCTTGGGCTCATTGATC+TGG | 0.351603 | 6.1:-5377062 | None:intergenic |
| CATATCAACATTGTCGTCAT+TGG | 0.354281 | 6.1:+5376322 | MS.gene074184:CDS |
| GTTTACAAGATTGGTGGTAT+TGG | 0.363154 | 6.1:+5377120 | MS.gene074184:CDS |
| GGCAGCAGCTTTGGTGACTT+TGG | 0.372842 | 6.1:-5377709 | None:intergenic |
| AAGTTGGCAGCTTCCTTGGC+AGG | 0.382611 | 6.1:-5377360 | None:intergenic |
| GTACCGAGCCTTTGAGTACT+TGG | 0.392389 | 6.1:-5376878 | None:intergenic |
| TCACCTTCAAAACCGGAGAT+TGG | 0.405248 | 6.1:-5376973 | None:intergenic |
| AGTGAAGTTGGCAGCTTCCT+TGG | 0.410082 | 6.1:-5377364 | None:intergenic |
| ACCAGATCGCCTGTCAATCT+TGG | 0.419719 | 6.1:-5377493 | None:intergenic |
| TTCCTTGGCAGGGTCATCCT+TGG | 0.427055 | 6.1:-5377349 | None:intergenic |
| ATCCCATTCGTTCCAATCTC+CGG | 0.427548 | 6.1:+5376961 | MS.gene074184:CDS |
| ATGGGTTCTTGACAAGCTTA+AGG | 0.430277 | 6.1:+5376474 | MS.gene074184:CDS |
| AAGCCTGAGGGGCTTGTCTG+TGG | 0.432212 | 6.1:-5377085 | None:intergenic |
| TCTGGAAAATCAACAACAAC+TGG | 0.436226 | 6.1:+5376355 | MS.gene074184:CDS |
| AGCCTGAGGGGCTTGTCTGT+GGG | 0.440652 | 6.1:-5377084 | None:intergenic |
| CCGGTCTCAACACGTCCAAC+TGG | 0.449484 | 6.1:-5377150 | None:intergenic |
| CATGTTGTCACCTTCAAAAC+CGG | 0.451540 | 6.1:-5376980 | None:intergenic |
| GGCAGGGTCATCCTTGGAGT+TGG | 0.452433 | 6.1:-5377343 | None:intergenic |
| TACCGAGCCTTTGAGTACTT+GGG | 0.452472 | 6.1:-5376877 | None:intergenic |
| ATGAACCACCCTGGTCAGAT+TGG | 0.454810 | 6.1:+5377402 | MS.gene074184:CDS |
| GGTCTCAACCACCATGGGCT+TGG | 0.458699 | 6.1:-5377583 | None:intergenic |
| CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 6.1:-5377580 | None:intergenic |
| TAAGGACTGCACAATCAGCC+TGG | 0.473376 | 6.1:-5376624 | None:intergenic |
| TTTGGTGACTTTGGCTCCAG+TGG | 0.473646 | 6.1:-5377700 | None:intergenic |
| ACCAAGATTGACAGGCGATC+TGG | 0.474566 | 6.1:+5377492 | MS.gene074184:CDS |
| CAAGATGTTTACAAGATTGG+TGG | 0.475647 | 6.1:+5377114 | MS.gene074184:CDS |
| GTCATTGGACATGTCGACTC+TGG | 0.490675 | 6.1:+5376337 | MS.gene074184:CDS |
| AGTTTCATCCTACTTGAAGA+AGG | 0.496964 | 6.1:+5376918 | MS.gene074184:CDS |
| TCCAAAAGTCACAACCATAC+CGG | 0.497778 | 6.1:-5377184 | None:intergenic |
| CTTAAGGCTGAGCGTGAAAG+AGG | 0.501131 | 6.1:+5376490 | MS.gene074184:CDS |
| CATCAAGGCTGTGGAGAAGA+AGG | 0.501366 | 6.1:+5377674 | MS.gene074184:CDS |
| CACCAACCTTGACTGGTACA+AGG | 0.502465 | 6.1:+5377014 | MS.gene074184:CDS |
| TCATCCTACTTGAAGAAGGT+TGG | 0.505639 | 6.1:+5376922 | MS.gene074184:CDS |
| AACTTGTTACCAAGATTGAC+AGG | 0.511236 | 6.1:+5377484 | MS.gene074184:CDS |
| CACCCTGGTCAGATTGGAAA+CGG | 0.512174 | 6.1:+5377408 | MS.gene074184:CDS |
| GACCCACAGACAAGCCCCTC+AGG | 0.515484 | 6.1:+5377082 | MS.gene074184:CDS |
| GAGCCTAAGTTCTTGAAGAA+TGG | 0.517492 | 6.1:+5377531 | MS.gene074184:CDS |
| GATTGACAGGCGATCTGGTA+AGG | 0.518046 | 6.1:+5377497 | MS.gene074184:CDS |
| CTTGTACCAGTCAAGGTTGG+TGG | 0.518944 | 6.1:-5377013 | None:intergenic |
| AAACCGGAGATTGGAACGAA+TGG | 0.520045 | 6.1:-5376964 | None:intergenic |
| TTGGTGACTTTGGCTCCAGT+GGG | 0.520107 | 6.1:-5377699 | None:intergenic |
| ATCATTGACTCCACCACTGG+TGG | 0.521304 | 6.1:+5376646 | MS.gene074184:CDS |
| AGAGGTCCACCAACCTTGAC+TGG | 0.523105 | 6.1:+5377007 | MS.gene074184:CDS |
| TCACCATTCTTCAAGAACTT+AGG | 0.524504 | 6.1:-5377534 | None:intergenic |
| ACCGAGCCTTTGAGTACTTG+GGG | 0.525913 | 6.1:-5376876 | None:intergenic |
| TTGAATCCGACATTGTCTCC+TGG | 0.526013 | 6.1:-5377273 | None:intergenic |
| TCAACCACCATGGGCTTGGT+GGG | 0.529820 | 6.1:-5377579 | None:intergenic |
| AACCGGAGATTGGAACGAAT+GGG | 0.531600 | 6.1:-5376963 | None:intergenic |
| CTTATCATTGACTCCACCAC+TGG | 0.532051 | 6.1:+5376643 | MS.gene074184:CDS |
| AGCGTTCATTCAAGTACGCA+TGG | 0.534658 | 6.1:+5376455 | MS.gene074184:CDS |
| TTGATGAAATCACGATGTCC+TGG | 0.536130 | 6.1:-5376580 | None:intergenic |
| TGCACAGTCATTGATGCTCC+AGG | 0.539947 | 6.1:+5376562 | MS.gene074184:CDS |
| GATGACTTGGGAAGTGAAGT+TGG | 0.546093 | 6.1:-5377376 | None:intergenic |
| TCCCTTGTACCAGTCAAGGT+TGG | 0.546130 | 6.1:-5377016 | None:intergenic |
| AAGCGAGAAGAGCGTGCTCA+CGG | 0.547764 | 6.1:-5376702 | None:intergenic |
| CAGTGGTGGAGTCAATGATA+AGG | 0.548349 | 6.1:-5376642 | None:intergenic |
| CCAAAAGTCACAACCATACC+GGG | 0.549217 | 6.1:-5377183 | None:intergenic |
| CGGTATTGTGAAACCCGGTA+TGG | 0.554074 | 6.1:+5377170 | MS.gene074184:CDS |
| TTCTTGAAGAATGGTGATGC+TGG | 0.554703 | 6.1:+5377540 | MS.gene074184:CDS |
| ATCTTGCAATGGAAGCCTGA+GGG | 0.556985 | 6.1:-5377097 | None:intergenic |
| TATCCGTTTCCAATCTGACC+AGG | 0.557011 | 6.1:-5377411 | None:intergenic |
| ACCAACCTTGACTGGTACAA+GGG | 0.559612 | 6.1:+5377015 | MS.gene074184:CDS |
| GTAACCAACCTTCTTCAAGT+AGG | 0.562921 | 6.1:-5376926 | None:intergenic |
| GCAAAGGTCTCAACCACCAT+GGG | 0.563446 | 6.1:-5377588 | None:intergenic |
| AGTTGGCAGCTTCCTTGGCA+GGG | 0.564600 | 6.1:-5377359 | None:intergenic |
| GGTGGTTCATGATGATGACT+TGG | 0.569890 | 6.1:-5377389 | None:intergenic |
| AGCTTCAAAACCACCAGTGG+TGG | 0.571917 | 6.1:-5376656 | None:intergenic |
| TTGGTCCCTTGTACCAGTCA+AGG | 0.575920 | 6.1:-5377020 | None:intergenic |
| AGCGAGAAGAGCGTGCTCAC+GGG | 0.577686 | 6.1:-5376701 | None:intergenic |
| GACTGTGCAGTAGTACTTGG+TGG | 0.578462 | 6.1:-5376548 | None:intergenic |
| TGTTAAGAATGTTGCTGTGA+AGG | 0.579878 | 6.1:+5377296 | MS.gene074184:CDS |
| CATGATTACTGGAACCTCCC+AGG | 0.581850 | 6.1:+5376606 | MS.gene074184:CDS |
| TCAAGAGCCTCAAGGAGAGT+TGG | 0.584894 | 6.1:-5377039 | None:intergenic |
| AACTTCAGTTGTCAAACCAG+TGG | 0.589445 | 6.1:-5377208 | None:intergenic |
| AATGACTGTGCAGTAGTACT+TGG | 0.591989 | 6.1:-5376551 | None:intergenic |
| GAAGCTGGTATCTCTAAGGA+TGG | 0.592030 | 6.1:+5376673 | MS.gene074184:CDS |
| CCAGTTGGACGTGTTGAGAC+CGG | 0.592088 | 6.1:+5377150 | MS.gene074184:CDS |
| ATCTTGTAAACATCTTGCAA+TGG | 0.592677 | 6.1:-5377108 | None:intergenic |
| TTTGCTGAATATCCTCCACT+TGG | 0.598309 | 6.1:+5377606 | MS.gene074184:CDS |
| GTGGAGAAGAAGGATCCCAC+TGG | 0.600566 | 6.1:+5377684 | MS.gene074184:CDS |
| GAGGTGTGGCAATCAAGCAC+TGG | 0.600600 | 6.1:-5377438 | None:intergenic |
| AAGGACTGCACAATCAGCCT+GGG | 0.602280 | 6.1:-5376623 | None:intergenic |
| GGTCACTTGATCTACAAGCT+AGG | 0.604596 | 6.1:+5376376 | MS.gene074184:CDS |
| TTTCCACAAGGCAATATCGA+TGG | 0.606438 | 6.1:-5376518 | None:intergenic |
| TGTTGGTGTCATCAAGGCTG+TGG | 0.608422 | 6.1:+5377665 | MS.gene074184:CDS |
| GATGGTTCCCACCAAGCCCA+TGG | 0.611182 | 6.1:+5377572 | MS.gene074184:CDS |
| CATACCGGGTTTCACAATAC+CGG | 0.612280 | 6.1:-5377169 | None:intergenic |
| GCGTTCATTCAAGTACGCAT+GGG | 0.615188 | 6.1:+5376456 | MS.gene074184:CDS |
| ACTTCAGTTGTCAAACCAGT+GGG | 0.615673 | 6.1:-5377207 | None:intergenic |
| AGCAAAGGTCTCAACCACCA+TGG | 0.617611 | 6.1:-5377589 | None:intergenic |
| CTCCAAGGATGACCCTGCCA+AGG | 0.619064 | 6.1:+5377347 | MS.gene074184:CDS |
| TTTCGTTGCATCCAACTCCA+AGG | 0.619372 | 6.1:+5377332 | MS.gene074184:CDS |
| AGTTGCTGTTGGTGTCATCA+AGG | 0.621005 | 6.1:+5377659 | MS.gene074184:CDS |
| AAGGTGACAACATGATTGAG+AGG | 0.624581 | 6.1:+5376989 | MS.gene074184:CDS |
| TCTTGCAATGGAAGCCTGAG+GGG | 0.631058 | 6.1:-5377096 | None:intergenic |
| ATCTGGTAAGGAGATTGAGA+AGG | 0.634092 | 6.1:+5377509 | MS.gene074184:CDS |
| TGATCTGGTCAAGAGCCTCA+AGG | 0.634180 | 6.1:-5377047 | None:intergenic |
| GATGATCTGTTGTTGTAACA+AGG | 0.635291 | 6.1:+5376744 | MS.gene074184:CDS |
| TGATGCTGGTATCATTAAGA+TGG | 0.636151 | 6.1:+5377554 | MS.gene074184:CDS |
| TGTGATCGAGAGATTCGAGA+AGG | 0.638590 | 6.1:+5376414 | MS.gene074184:CDS |
| GACTGCACAATCAGCCTGGG+AGG | 0.640106 | 6.1:-5376620 | None:intergenic |
| CACTTGATCTACAAGCTAGG+AGG | 0.645428 | 6.1:+5376379 | MS.gene074184:CDS |
| TTACCATCGATATTGCCTTG+TGG | 0.647445 | 6.1:+5376515 | MS.gene074184:CDS |
| GGTATTGGAACTGTGCCAGT+TGG | 0.649080 | 6.1:+5377135 | MS.gene074184:CDS |
| GTCATCATCATGAACCACCC+TGG | 0.650188 | 6.1:+5377393 | MS.gene074184:CDS |
| GCTCTTCCAGGAGACAATGT+CGG | 0.651488 | 6.1:+5377267 | MS.gene074184:CDS |
| AAACTTCACAGCAATGTGAG+AGG | 0.653594 | 6.1:-5377457 | None:intergenic |
| CATCTTGCAATGGAAGCCTG+AGG | 0.654491 | 6.1:-5377098 | None:intergenic |
| ACAGCAAAACGTCCAAGTGG+AGG | 0.656142 | 6.1:-5377618 | None:intergenic |
| ATGCGTCAAACAGTTGCTGT+TGG | 0.665270 | 6.1:+5377648 | MS.gene074184:CDS |
| TCGGTACGATGAAATCGTGA+AGG | 0.669066 | 6.1:+5376894 | MS.gene074184:CDS |
| ACCAGCTTCAAAACCACCAG+TGG | 0.669846 | 6.1:-5376659 | None:intergenic |
| TCACAGCAATGTGAGAGGTG+TGG | 0.670228 | 6.1:-5377452 | None:intergenic |
| AAGTGGAGGATATTCAGCAA+AGG | 0.671437 | 6.1:-5377604 | None:intergenic |
| CAAGGGACCAACTCTCCTTG+AGG | 0.682171 | 6.1:+5377032 | MS.gene074184:CDS |
| CCGAGCCTTTGAGTACTTGG+GGG | 0.683229 | 6.1:-5376875 | None:intergenic |
| CTGACAGCAAAACGTCCAAG+TGG | 0.686824 | 6.1:-5377621 | None:intergenic |
| CGTTTCCAATCTGACCAGGG+TGG | 0.687081 | 6.1:-5377407 | None:intergenic |
| ATCCGTTTCCAATCTGACCA+GGG | 0.688739 | 6.1:-5377410 | None:intergenic |
| GAGACCGGTATTGTGAAACC+CGG | 0.689348 | 6.1:+5377165 | MS.gene074184:CDS |
| GTGGTTCATGATGATGACTT+GGG | 0.690284 | 6.1:-5377388 | None:intergenic |
| GGTGGTCTCAAATTTCCACA+AGG | 0.697133 | 6.1:-5376530 | None:intergenic |
| GTCTGTTGAGATGCACCACG+AGG | 0.705830 | 6.1:+5377233 | MS.gene074184:CDS |
| GCTGTGAAGGATCTCAAGCG+TGG | 0.706441 | 6.1:+5377309 | MS.gene074184:CDS |
| GGTTCCCACCAAGCCCATGG+TGG | 0.716413 | 6.1:+5377575 | MS.gene074184:CDS |
| GAGCTTCAGTGAGAGCCTCG+TGG | 0.728674 | 6.1:-5377248 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCAATTATTTGTTTCAGA+TGG | + | chr6.1:5376843-5376862 | MS.gene074184:intron | 20.0% |
| ATCTTGTAAACATCTTGCAA+TGG | - | chr6.1:5377111-5377130 | None:intergenic | 30.0% | |
| TGAGTTACATATTCTGACTT+TGG | + | chr6.1:5376820-5376839 | MS.gene074184:intron | 30.0% | |
| TTCATCAAGAACATGATTAC+TGG | + | chr6.1:5376595-5376614 | MS.gene074184:CDS | 30.0% | |
| TTGCAAGATGTTTACAAGAT+TGG | + | chr6.1:5377111-5377130 | MS.gene074184:CDS | 30.0% | |
| AGTTTCATCCTACTTGAAGA+AGG | + | chr6.1:5376918-5376937 | MS.gene074184:CDS | 35.0% | |
| CAAGATGTTTACAAGATTGG+TGG | + | chr6.1:5377114-5377133 | MS.gene074184:CDS | 35.0% | |
| CATATCAACATTGTCGTCAT+TGG | + | chr6.1:5376322-5376341 | MS.gene074184:CDS | 35.0% | |
| GATGATCTGTTGTTGTAACA+AGG | + | chr6.1:5376744-5376763 | MS.gene074184:CDS | 35.0% | |
| TCACCATTCTTCAAGAACTT+AGG | - | chr6.1:5377537-5377556 | None:intergenic | 35.0% | |
| TCTGGAAAATCAACAACAAC+TGG | + | chr6.1:5376355-5376374 | MS.gene074184:CDS | 35.0% | |
| TGATGCTGGTATCATTAAGA+TGG | + | chr6.1:5377554-5377573 | MS.gene074184:CDS | 35.0% | |
| TGTTAAGAATGTTGCTGTGA+AGG | + | chr6.1:5377296-5377315 | MS.gene074184:CDS | 35.0% | |
| ! | GTTTACAAGATTGGTGGTAT+TGG | + | chr6.1:5377120-5377139 | MS.gene074184:CDS | 35.0% |
| !! | AACTTGTTACCAAGATTGAC+AGG | + | chr6.1:5377484-5377503 | MS.gene074184:CDS | 35.0% |
| !!! | TTTTGAAGCTGGTATCTCTA+AGG | + | chr6.1:5376669-5376688 | MS.gene074184:CDS | 35.0% |
| AAACTTCACAGCAATGTGAG+AGG | - | chr6.1:5377460-5377479 | None:intergenic | 40.0% | |
| AACTTCAGTTGTCAAACCAG+TGG | - | chr6.1:5377211-5377230 | None:intergenic | 40.0% | |
| AAGGTGACAACATGATTGAG+AGG | + | chr6.1:5376989-5377008 | MS.gene074184:CDS | 40.0% | |
| AAGTGGAGGATATTCAGCAA+AGG | - | chr6.1:5377607-5377626 | None:intergenic | 40.0% | |
| AATGACTGTGCAGTAGTACT+TGG | - | chr6.1:5376554-5376573 | None:intergenic | 40.0% | |
| ACTTCAGTTGTCAAACCAGT+GGG | - | chr6.1:5377210-5377229 | None:intergenic | 40.0% | |
| ATCTGGTAAGGAGATTGAGA+AGG | + | chr6.1:5377509-5377528 | MS.gene074184:CDS | 40.0% | |
| ATGGGTTCTTGACAAGCTTA+AGG | + | chr6.1:5376474-5376493 | MS.gene074184:CDS | 40.0% | |
| CATGTTGTCACCTTCAAAAC+CGG | - | chr6.1:5376983-5377002 | None:intergenic | 40.0% | |
| GAGCCTAAGTTCTTGAAGAA+TGG | + | chr6.1:5377531-5377550 | MS.gene074184:CDS | 40.0% | |
| GTAACCAACCTTCTTCAAGT+AGG | - | chr6.1:5376929-5376948 | None:intergenic | 40.0% | |
| TCATCCTACTTGAAGAAGGT+TGG | + | chr6.1:5376922-5376941 | MS.gene074184:CDS | 40.0% | |
| TCCAAAAGTCACAACCATAC+CGG | - | chr6.1:5377187-5377206 | None:intergenic | 40.0% | |
| TTACCATCGATATTGCCTTG+TGG | + | chr6.1:5376515-5376534 | MS.gene074184:CDS | 40.0% | |
| TTGATGAAATCACGATGTCC+TGG | - | chr6.1:5376583-5376602 | None:intergenic | 40.0% | |
| TTTCCACAAGGCAATATCGA+TGG | - | chr6.1:5376521-5376540 | None:intergenic | 40.0% | |
| TTTGCTGAATATCCTCCACT+TGG | + | chr6.1:5377606-5377625 | MS.gene074184:CDS | 40.0% | |
| ! | GAACGAATGGGATTTTGTCT+GGG | - | chr6.1:5376954-5376973 | None:intergenic | 40.0% |
| ! | GTGGTTCATGATGATGACTT+GGG | - | chr6.1:5377391-5377410 | None:intergenic | 40.0% |
| ! | TTCTTGAAGAATGGTGATGC+TGG | + | chr6.1:5377540-5377559 | MS.gene074184:CDS | 40.0% |
| AAACCGGAGATTGGAACGAA+TGG | - | chr6.1:5376967-5376986 | None:intergenic | 45.0% | |
| AACCGGAGATTGGAACGAAT+GGG | - | chr6.1:5376966-5376985 | None:intergenic | 45.0% | |
| ACCAACCTTGACTGGTACAA+GGG | + | chr6.1:5377015-5377034 | MS.gene074184:CDS | 45.0% | |
| AGCGTTCATTCAAGTACGCA+TGG | + | chr6.1:5376455-5376474 | MS.gene074184:CDS | 45.0% | |
| ATCCCATTCGTTCCAATCTC+CGG | + | chr6.1:5376961-5376980 | MS.gene074184:CDS | 45.0% | |
| ATCCGTTTCCAATCTGACCA+GGG | - | chr6.1:5377413-5377432 | None:intergenic | 45.0% | |
| ATCTTGCAATGGAAGCCTGA+GGG | - | chr6.1:5377100-5377119 | None:intergenic | 45.0% | |
| ATGCGTCAAACAGTTGCTGT+TGG | + | chr6.1:5377648-5377667 | MS.gene074184:CDS | 45.0% | |
| CACTTGATCTACAAGCTAGG+AGG | + | chr6.1:5376379-5376398 | MS.gene074184:CDS | 45.0% | |
| CATACCGGGTTTCACAATAC+CGG | - | chr6.1:5377172-5377191 | None:intergenic | 45.0% | |
| CCAAAAGTCACAACCATACC+GGG | - | chr6.1:5377186-5377205 | None:intergenic | 45.0% | |
| GCGTTCATTCAAGTACGCAT+GGG | + | chr6.1:5376456-5376475 | MS.gene074184:CDS | 45.0% | |
| GGTCACTTGATCTACAAGCT+AGG | + | chr6.1:5376376-5376395 | MS.gene074184:CDS | 45.0% | |
| GGTGGTCTCAAATTTCCACA+AGG | - | chr6.1:5376533-5376552 | None:intergenic | 45.0% | |
| TACCGAGCCTTTGAGTACTT+GGG | - | chr6.1:5376880-5376899 | None:intergenic | 45.0% | |
| TATCCGTTTCCAATCTGACC+AGG | - | chr6.1:5377414-5377433 | None:intergenic | 45.0% | |
| TCACCTTCAAAACCGGAGAT+TGG | - | chr6.1:5376976-5376995 | None:intergenic | 45.0% | |
| TCGGTACGATGAAATCGTGA+AGG | + | chr6.1:5376894-5376913 | MS.gene074184:CDS | 45.0% | |
| TGTGATCGAGAGATTCGAGA+AGG | + | chr6.1:5376414-5376433 | MS.gene074184:CDS | 45.0% | |
| TTGAATCCGACATTGTCTCC+TGG | - | chr6.1:5377276-5377295 | None:intergenic | 45.0% | |
| TTTCGTTGCATCCAACTCCA+AGG | + | chr6.1:5377332-5377351 | MS.gene074184:CDS | 45.0% | |
| ! | CAGTGGTGGAGTCAATGATA+AGG | - | chr6.1:5376645-5376664 | None:intergenic | 45.0% |
| ! | GAAGCTGGTATCTCTAAGGA+TGG | + | chr6.1:5376673-5376692 | MS.gene074184:CDS | 45.0% |
| ! | GATGACTTGGGAAGTGAAGT+TGG | - | chr6.1:5377379-5377398 | None:intergenic | 45.0% |
| ! | GGAACGAATGGGATTTTGTC+TGG | - | chr6.1:5376955-5376974 | None:intergenic | 45.0% |
| ! | GGTGGTTCATGATGATGACT+TGG | - | chr6.1:5377392-5377411 | None:intergenic | 45.0% |
| !! | AGTTGCTGTTGGTGTCATCA+AGG | + | chr6.1:5377659-5377678 | MS.gene074184:CDS | 45.0% |
| !! | CTTATCATTGACTCCACCAC+TGG | + | chr6.1:5376643-5376662 | MS.gene074184:CDS | 45.0% |
| !! | GCTCTTCTCGCTTTTACTCT+TGG | + | chr6.1:5376712-5376731 | MS.gene074184:CDS | 45.0% |
| !! | GTTCCAATCTCCGGTTTTGA+AGG | + | chr6.1:5376970-5376989 | MS.gene074184:CDS | 45.0% |
| AAGGACTGCACAATCAGCCT+GGG | - | chr6.1:5376626-5376645 | None:intergenic | 50.0% | |
| ACAGCAAAACGTCCAAGTGG+AGG | - | chr6.1:5377621-5377640 | None:intergenic | 50.0% | |
| ACCAAGATTGACAGGCGATC+TGG | + | chr6.1:5377492-5377511 | MS.gene074184:CDS | 50.0% | |
| ACCAGATCGCCTGTCAATCT+TGG | - | chr6.1:5377496-5377515 | None:intergenic | 50.0% | |
| ACCAGCTTCAAAACCACCAG+TGG | - | chr6.1:5376662-5376681 | None:intergenic | 50.0% | |
| ACCGAGCCTTTGAGTACTTG+GGG | - | chr6.1:5376879-5376898 | None:intergenic | 50.0% | |
| AGCAAAGGTCTCAACCACCA+TGG | - | chr6.1:5377592-5377611 | None:intergenic | 50.0% | |
| AGCTTCAAAACCACCAGTGG+TGG | - | chr6.1:5376659-5376678 | None:intergenic | 50.0% | |
| AGTGAAGTTGGCAGCTTCCT+TGG | - | chr6.1:5377367-5377386 | None:intergenic | 50.0% | |
| ATGAACCACCCTGGTCAGAT+TGG | + | chr6.1:5377402-5377421 | MS.gene074184:CDS | 50.0% | |
| CACCAACCTTGACTGGTACA+AGG | + | chr6.1:5377014-5377033 | MS.gene074184:CDS | 50.0% | |
| CACCCTGGTCAGATTGGAAA+CGG | + | chr6.1:5377408-5377427 | MS.gene074184:CDS | 50.0% | |
| CATCAAGGCTGTGGAGAAGA+AGG | + | chr6.1:5377674-5377693 | MS.gene074184:CDS | 50.0% | |
| CATCTTGCAATGGAAGCCTG+AGG | - | chr6.1:5377101-5377120 | None:intergenic | 50.0% | |
| CATGATTACTGGAACCTCCC+AGG | + | chr6.1:5376606-5376625 | MS.gene074184:CDS | 50.0% | |
| CGGTATTGTGAAACCCGGTA+TGG | + | chr6.1:5377170-5377189 | MS.gene074184:CDS | 50.0% | |
| CTGACAGCAAAACGTCCAAG+TGG | - | chr6.1:5377624-5377643 | None:intergenic | 50.0% | |
| CTTAAGGCTGAGCGTGAAAG+AGG | + | chr6.1:5376490-5376509 | MS.gene074184:CDS | 50.0% | |
| CTTCTTCTTGGCAGCAGCTT+TGG | - | chr6.1:5377721-5377740 | None:intergenic | 50.0% | |
| CTTGTACCAGTCAAGGTTGG+TGG | - | chr6.1:5377016-5377035 | None:intergenic | 50.0% | |
| GACTGTGCAGTAGTACTTGG+TGG | - | chr6.1:5376551-5376570 | None:intergenic | 50.0% | |
| GAGACCGGTATTGTGAAACC+CGG | + | chr6.1:5377165-5377184 | MS.gene074184:CDS | 50.0% | |
| GATTGACAGGCGATCTGGTA+AGG | + | chr6.1:5377497-5377516 | MS.gene074184:CDS | 50.0% | |
| GCAAAGGTCTCAACCACCAT+GGG | - | chr6.1:5377591-5377610 | None:intergenic | 50.0% | |
| GCTCTTCCAGGAGACAATGT+CGG | + | chr6.1:5377267-5377286 | MS.gene074184:CDS | 50.0% | |
| GTACCGAGCCTTTGAGTACT+TGG | - | chr6.1:5376881-5376900 | None:intergenic | 50.0% | |
| GTCATCATCATGAACCACCC+TGG | + | chr6.1:5377393-5377412 | MS.gene074184:CDS | 50.0% | |
| GTCTCTTGGGCTCATTGATC+TGG | - | chr6.1:5377065-5377084 | None:intergenic | 50.0% | |
| TAAGGACTGCACAATCAGCC+TGG | - | chr6.1:5376627-5376646 | None:intergenic | 50.0% | |
| TACCACCCCCAAGTACTCAA+AGG | + | chr6.1:5376870-5376889 | MS.gene074184:CDS | 50.0% | |
| TCAAGAGCCTCAAGGAGAGT+TGG | - | chr6.1:5377042-5377061 | None:intergenic | 50.0% | |
| TCACAGCAATGTGAGAGGTG+TGG | - | chr6.1:5377455-5377474 | None:intergenic | 50.0% | |
| TCCCTTGTACCAGTCAAGGT+TGG | - | chr6.1:5377019-5377038 | None:intergenic | 50.0% | |
| TCTTGCAATGGAAGCCTGAG+GGG | - | chr6.1:5377099-5377118 | None:intergenic | 50.0% | |
| TGATCTGGTCAAGAGCCTCA+AGG | - | chr6.1:5377050-5377069 | None:intergenic | 50.0% | |
| TGCACAGTCATTGATGCTCC+AGG | + | chr6.1:5376562-5376581 | MS.gene074184:CDS | 50.0% | |
| TTGGTCCCTTGTACCAGTCA+AGG | - | chr6.1:5377023-5377042 | None:intergenic | 50.0% | |
| ! | CCCGGTATGGTTGTGACTTT+TGG | + | chr6.1:5377183-5377202 | MS.gene074184:CDS | 50.0% |
| ! | GGTATTGGAACTGTGCCAGT+TGG | + | chr6.1:5377135-5377154 | MS.gene074184:CDS | 50.0% |
| ! | GTTGTGACTTTTGGACCCAC+TGG | + | chr6.1:5377192-5377211 | MS.gene074184:CDS | 50.0% |
| ! | TTGGTGACTTTGGCTCCAGT+GGG | - | chr6.1:5377702-5377721 | None:intergenic | 50.0% |
| ! | TTTGGTGACTTTGGCTCCAG+TGG | - | chr6.1:5377703-5377722 | None:intergenic | 50.0% |
| !! | ATCATTGACTCCACCACTGG+TGG | + | chr6.1:5376646-5376665 | MS.gene074184:CDS | 50.0% |
| !! | GTCATTGGACATGTCGACTC+TGG | + | chr6.1:5376337-5376356 | MS.gene074184:CDS | 50.0% |
| !! | TGTTGGTGTCATCAAGGCTG+TGG | + | chr6.1:5377665-5377684 | MS.gene074184:CDS | 50.0% |
| !!! | ACCACTGGTGGTTTTGAAGC+TGG | + | chr6.1:5376658-5376677 | MS.gene074184:CDS | 50.0% |
| AAGTTGGCAGCTTCCTTGGC+AGG | - | chr6.1:5377363-5377382 | None:intergenic | 55.0% | |
| AGAGGTCCACCAACCTTGAC+TGG | + | chr6.1:5377007-5377026 | MS.gene074184:CDS | 55.0% | |
| AGCCTTTGAGTACTTGGGGG+TGG | - | chr6.1:5376875-5376894 | None:intergenic | 55.0% | |
| AGTTGGCAGCTTCCTTGGCA+GGG | - | chr6.1:5377362-5377381 | None:intergenic | 55.0% | |
| CAAGGGACCAACTCTCCTTG+AGG | + | chr6.1:5377032-5377051 | MS.gene074184:CDS | 55.0% | |
| CCAGTTGGACGTGTTGAGAC+CGG | + | chr6.1:5377150-5377169 | MS.gene074184:CDS | 55.0% | |
| CCCCCAAGTACTCAAAGGCT+CGG | + | chr6.1:5376875-5376894 | MS.gene074184:CDS | 55.0% | |
| CCGAGCCTTTGAGTACTTGG+GGG | - | chr6.1:5376878-5376897 | None:intergenic | 55.0% | |
| CGTTTCCAATCTGACCAGGG+TGG | - | chr6.1:5377410-5377429 | None:intergenic | 55.0% | |
| GAGGTGTGGCAATCAAGCAC+TGG | - | chr6.1:5377441-5377460 | None:intergenic | 55.0% | |
| GCTCTCACTGAAGCTCTTCC+AGG | + | chr6.1:5377255-5377274 | MS.gene074184:CDS | 55.0% | |
| GCTGTGAAGGATCTCAAGCG+TGG | + | chr6.1:5377309-5377328 | MS.gene074184:CDS | 55.0% | |
| GGCTTGTCTGTGGGTCTCTT+GGG | - | chr6.1:5377078-5377097 | None:intergenic | 55.0% | |
| GTCTGTTGAGATGCACCACG+AGG | + | chr6.1:5377233-5377252 | MS.gene074184:CDS | 55.0% | |
| GTGGAGAAGAAGGATCCCAC+TGG | + | chr6.1:5377684-5377703 | MS.gene074184:CDS | 55.0% | |
| TTCCTTGGCAGGGTCATCCT+TGG | - | chr6.1:5377352-5377371 | None:intergenic | 55.0% | |
| ! | AAGCGAGAAGAGCGTGCTCA+CGG | - | chr6.1:5376705-5376724 | None:intergenic | 55.0% |
| ! | GGCAGCAGCTTTGGTGACTT+TGG | - | chr6.1:5377712-5377731 | None:intergenic | 55.0% |
| ! | TCAACCACCATGGGCTTGGT+GGG | - | chr6.1:5377582-5377601 | None:intergenic | 55.0% |
| AAGCCTGAGGGGCTTGTCTG+TGG | - | chr6.1:5377088-5377107 | None:intergenic | 60.0% | |
| AGCCTGAGGGGCTTGTCTGT+GGG | - | chr6.1:5377087-5377106 | None:intergenic | 60.0% | |
| CCGGTCTCAACACGTCCAAC+TGG | - | chr6.1:5377153-5377172 | None:intergenic | 60.0% | |
| CTCAACCACCATGGGCTTGG+TGG | - | chr6.1:5377583-5377602 | None:intergenic | 60.0% | |
| CTCCAAGGATGACCCTGCCA+AGG | + | chr6.1:5377347-5377366 | MS.gene074184:CDS | 60.0% | |
| GACTGCACAATCAGCCTGGG+AGG | - | chr6.1:5376623-5376642 | None:intergenic | 60.0% | |
| GAGCTTCAGTGAGAGCCTCG+TGG | - | chr6.1:5377251-5377270 | None:intergenic | 60.0% | |
| GATGGTTCCCACCAAGCCCA+TGG | + | chr6.1:5377572-5377591 | MS.gene074184:CDS | 60.0% | |
| GGCAGGGTCATCCTTGGAGT+TGG | - | chr6.1:5377346-5377365 | None:intergenic | 60.0% | |
| GGGCTTGTCTGTGGGTCTCT+TGG | - | chr6.1:5377079-5377098 | None:intergenic | 60.0% | |
| GGTCTCAACCACCATGGGCT+TGG | - | chr6.1:5377586-5377605 | None:intergenic | 60.0% | |
| ! | AGCGAGAAGAGCGTGCTCAC+GGG | - | chr6.1:5376704-5376723 | None:intergenic | 60.0% |
| GACCCACAGACAAGCCCCTC+AGG | + | chr6.1:5377082-5377101 | MS.gene074184:CDS | 65.0% | |
| GGTTCCCACCAAGCCCATGG+TGG | + | chr6.1:5377575-5377594 | MS.gene074184:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 5376304 | 5377743 | 5376304 | ID=MS.gene074184 |
| chr6.1 | mRNA | 5376304 | 5377743 | 5376304 | ID=MS.gene074184.t1;Parent=MS.gene074184 |
| chr6.1 | exon | 5376304 | 5376765 | 5376304 | ID=MS.gene074184.t1.exon1;Parent=MS.gene074184.t1 |
| chr6.1 | CDS | 5376304 | 5376765 | 5376304 | ID=cds.MS.gene074184.t1;Parent=MS.gene074184.t1 |
| chr6.1 | exon | 5376862 | 5377743 | 5376862 | ID=MS.gene074184.t1.exon2;Parent=MS.gene074184.t1 |
| chr6.1 | CDS | 5376862 | 5377743 | 5376862 | ID=cds.MS.gene074184.t1;Parent=MS.gene074184.t1 |
| Gene Sequence |
| Protein sequence |
