Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041766.t1 | XP_003591959.2 | 99.6 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 1.70E-258 | 901.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041766.t1 | O64937 | 96.7 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 6.5e-254 | 877.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041766.t1 | G7I9L3 | 99.6 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 1.3e-258 | 901.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041766.t1 | MTR_1g495705 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 916 |
MS.gene041766.t1 | MTR_1g095650 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 916 |
MS.gene041766.t1 | MTR_1g095703 | 99.330 | 448 | 3 | 0 | 1 | 448 | 1 | 448 | 0.0 | 915 |
MS.gene041766.t1 | MTR_6g021800 | 96.652 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 0.0 | 896 |
MS.gene041766.t1 | MTR_6g021805 | 96.652 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 0.0 | 896 |
MS.gene041766.t1 | MTR_4g014810 | 96.205 | 448 | 16 | 1 | 1 | 448 | 1 | 447 | 0.0 | 890 |
MS.gene041766.t1 | MTR_1g013680 | 95.565 | 451 | 17 | 1 | 1 | 448 | 1 | 451 | 0.0 | 879 |
MS.gene041766.t1 | MTR_1g085410 | 81.674 | 442 | 81 | 0 | 1 | 442 | 1 | 442 | 0.0 | 746 |
MS.gene041766.t1 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 736 |
MS.gene041766.t1 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 734 |
MS.gene041766.t1 | MTR_1g024175 | 79.263 | 434 | 90 | 0 | 1 | 434 | 1 | 434 | 0.0 | 728 |
MS.gene041766.t1 | MTR_8g014590 | 79.733 | 449 | 89 | 1 | 1 | 447 | 1 | 449 | 0.0 | 723 |
MS.gene041766.t1 | MTR_1g095650 | 99.424 | 347 | 2 | 0 | 102 | 448 | 1 | 347 | 0.0 | 708 |
MS.gene041766.t1 | MTR_2g082730 | 72.644 | 435 | 102 | 2 | 1 | 433 | 1 | 420 | 0.0 | 645 |
MS.gene041766.t1 | MTR_5g037350 | 67.660 | 470 | 115 | 1 | 3 | 435 | 13 | 482 | 0.0 | 634 |
MS.gene041766.t1 | MTR_1g089520 | 71.395 | 430 | 105 | 3 | 4 | 432 | 5 | 417 | 0.0 | 627 |
MS.gene041766.t1 | MTR_2g082665 | 67.586 | 435 | 98 | 2 | 1 | 433 | 1 | 394 | 0.0 | 587 |
MS.gene041766.t1 | MTR_2g037420 | 65.820 | 433 | 105 | 3 | 1 | 431 | 1 | 392 | 0.0 | 563 |
MS.gene041766.t1 | MTR_2g080210 | 63.839 | 448 | 119 | 5 | 1 | 445 | 1 | 408 | 0.0 | 551 |
MS.gene041766.t1 | MTR_8g013910 | 63.920 | 449 | 127 | 5 | 1 | 433 | 1 | 430 | 0.0 | 551 |
MS.gene041766.t1 | MTR_8g008740 | 78.462 | 325 | 69 | 1 | 1 | 324 | 1 | 325 | 0.0 | 539 |
MS.gene041766.t1 | MTR_1g112460 | 66.443 | 298 | 59 | 4 | 155 | 447 | 1 | 262 | 2.52e-128 | 372 |
MS.gene041766.t1 | MTR_1g495735 | 76.119 | 201 | 38 | 1 | 240 | 430 | 106 | 306 | 1.46e-100 | 303 |
MS.gene041766.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 5.46e-17 | 81.6 |
MS.gene041766.t1 | MTR_6g080420 | 37.963 | 432 | 254 | 6 | 5 | 428 | 89 | 514 | 6.09e-97 | 301 |
MS.gene041766.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 49 | 476 | 7.36e-94 | 291 |
MS.gene041766.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 43 | 470 | 9.95e-94 | 291 |
MS.gene041766.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 70 | 497 | 1.86e-93 | 291 |
MS.gene041766.t1 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 275 | 704 | 2.65e-91 | 291 |
MS.gene041766.t1 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 348 | 777 | 2.21e-90 | 291 |
MS.gene041766.t1 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 6.53e-90 | 274 |
MS.gene041766.t1 | MTR_4g054970 | 57.025 | 242 | 75 | 4 | 193 | 431 | 50 | 265 | 6.41e-81 | 251 |
MS.gene041766.t1 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 7.81e-13 | 68.9 |
MS.gene041766.t1 | MTR_1g024165 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 1.45e-78 | 241 |
MS.gene041766.t1 | MTR_8g014950 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 1.65e-47 | 159 |
MS.gene041766.t1 | MTR_7g094460 | 30.365 | 438 | 245 | 14 | 3 | 429 | 59 | 447 | 1.59e-45 | 164 |
MS.gene041766.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 7.51e-43 | 149 |
MS.gene041766.t1 | MTR_2g021300 | 29.613 | 439 | 247 | 12 | 3 | 429 | 46 | 434 | 5.26e-42 | 154 |
MS.gene041766.t1 | MTR_3g076660 | 29.955 | 444 | 250 | 15 | 3 | 429 | 88 | 487 | 1.61e-40 | 151 |
MS.gene041766.t1 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 213 | 294 | 2 | 83 | 2.64e-28 | 110 |
MS.gene041766.t1 | MTR_3g097250 | 26.471 | 272 | 143 | 9 | 9 | 272 | 85 | 307 | 1.38e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene041766.t1 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene041766.t1 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene041766.t1 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene041766.t1 | AT1G07920 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene041766.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene041766.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene041766.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene041766.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene041766.t1 | AT1G07930 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
MS.gene041766.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
MS.gene041766.t1 | AT1G07930 | 88.034 | 117 | 13 | 1 | 331 | 447 | 254 | 369 | 1.10e-65 | 215 |
MS.gene041766.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.39e-94 | 294 |
MS.gene041766.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.39e-94 | 294 |
MS.gene041766.t1 | AT1G18070 | 36.927 | 436 | 256 | 6 | 5 | 424 | 99 | 531 | 3.96e-91 | 286 |
MS.gene041766.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 2.20e-90 | 288 |
MS.gene041766.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 2.25e-90 | 288 |
MS.gene041766.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 2.25e-90 | 288 |
MS.gene041766.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 1.28e-89 | 288 |
MS.gene041766.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 1.34e-89 | 288 |
MS.gene041766.t1 | AT1G35550 | 78.641 | 103 | 22 | 0 | 335 | 437 | 1 | 103 | 1.58e-53 | 174 |
MS.gene041766.t1 | AT4G02930 | 30.296 | 439 | 245 | 15 | 3 | 429 | 63 | 452 | 7.25e-44 | 160 |
MS.gene041766.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 1.66e-43 | 159 |
MS.gene041766.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 1.66e-43 | 159 |
MS.gene041766.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 3.22e-12 | 68.9 |
MS.gene041766.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.25e-11 | 66.6 |
MS.gene041766.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.32e-11 | 66.2 |
MS.gene041766.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 4.64e-11 | 65.5 |
Find 148 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCACCATTCTTCAAGAATT+TGG | 0.066665 | 1.1:+68985134 | None:intergenic |
GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 1.1:-68985978 | MS.gene041766:CDS |
GTCTACAAGATTGGAGGAAT+TGG | 0.315206 | 1.1:-68985549 | MS.gene041766:CDS |
GCCTCTTAGGCTCATTGATT+TGG | 0.315866 | 1.1:+68985607 | None:intergenic |
TGTCAAGAATGTTGCTGTTA+AGG | 0.325240 | 1.1:-68985373 | MS.gene041766:CDS |
TCACCATTCTTCAAGAATTT+GGG | 0.331757 | 1.1:+68985135 | None:intergenic |
ATAGCCAACCTTCTTCAAAT+AGG | 0.332380 | 1.1:+68985743 | None:intergenic |
ATTCCATTTGTTCCCATCTC+TGG | 0.368209 | 1.1:-68985708 | MS.gene041766:CDS |
CTTCTTCTTCAATGCTGACT+TGG | 0.371330 | 1.1:+68984948 | None:intergenic |
CTCCTTGGCTGGGTCATCCT+TGG | 0.371873 | 1.1:+68985320 | None:intergenic |
ATATCTACCCTTGGAGTACT+TGG | 0.380807 | 1.1:+68985791 | None:intergenic |
ACTAAGATTGATAGGCGTTC+TGG | 0.382761 | 1.1:-68985177 | MS.gene041766:CDS |
GCTCTAACAGAGGCCCTTCC+TGG | 0.389893 | 1.1:-68985414 | MS.gene041766:CDS |
AAGCTAGCAGCCTCCTTGGC+TGG | 0.398839 | 1.1:+68985309 | None:intergenic |
GGATCCCAGTGGAGGACTTA+AGG | 0.415493 | 1.1:-68984974 | MS.gene041766:CDS |
GCAAAAGTGACAACCATTCC+AGG | 0.418006 | 1.1:+68985486 | None:intergenic |
CTCATCATTGATTCCACTAC+TGG | 0.419293 | 1.1:-68986047 | MS.gene041766:CDS |
GAGGTGTGGCAGTCAAGAAC+AGG | 0.420700 | 1.1:+68985231 | None:intergenic |
ATGAATCACCCTGGCCAGAT+TGG | 0.425183 | 1.1:-68985267 | MS.gene041766:CDS |
CCTGTGGGGCGTGTCGAGAC+TGG | 0.431830 | 1.1:-68985519 | MS.gene041766:CDS |
CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 1.1:-68985261 | MS.gene041766:CDS |
GCCCCTTCGACTACCACTTC+AGG | 0.433104 | 1.1:-68985574 | MS.gene041766:CDS |
GTCATCGGCCATGTTGACTC+TGG | 0.440627 | 1.1:-68986353 | MS.gene041766:CDS |
AGGACTAATGGGTAAGGAAA+AGG | 0.440646 | 1.1:-68986393 | None:intergenic |
AGCGTTCATTCAAGTATGCC+TGG | 0.444655 | 1.1:-68986235 | MS.gene041766:CDS |
GGGCATAGCCATTTCCAATC+TGG | 0.448022 | 1.1:+68985253 | None:intergenic |
AAACCAGAGATGGGAACAAA+TGG | 0.449170 | 1.1:+68985705 | None:intergenic |
ACTTCAGTTGTCAGTCCAGT+AGG | 0.456008 | 1.1:+68985462 | None:intergenic |
CTTCAGGATGTCTACAAGAT+TGG | 0.458119 | 1.1:-68985558 | MS.gene041766:CDS |
AGTCTCAACCACCATGGGCT+TGG | 0.462350 | 1.1:+68985086 | None:intergenic |
ACCAAATCAATGAGCCTAAG+AGG | 0.463105 | 1.1:-68985608 | MS.gene041766:CDS |
TGGGTCATCCTTGGAGTTTG+AGG | 0.465051 | 1.1:+68985329 | None:intergenic |
CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 1.1:+68985089 | None:intergenic |
TAGGCTCATTGATTTGGTCA+AGG | 0.472707 | 1.1:+68985613 | None:intergenic |
GGCTTGTCTGAAGGCCTCTT+AGG | 0.473139 | 1.1:+68985594 | None:intergenic |
TAGCCATTTCCAATCTGGCC+AGG | 0.474048 | 1.1:+68985258 | None:intergenic |
AGGCTCATTGATTTGGTCAA+GGG | 0.475242 | 1.1:+68985614 | None:intergenic |
TGCACTGTCATTGATGCCCC+TGG | 0.477178 | 1.1:-68986128 | MS.gene041766:CDS |
TTAATGAAATCCCTGTGTCC+AGG | 0.479234 | 1.1:+68986110 | None:intergenic |
AGTAAAGCTAGCAGCCTCCT+TGG | 0.479718 | 1.1:+68985305 | None:intergenic |
TCACCATTGACATTGCTCTC+TGG | 0.481623 | 1.1:-68986175 | MS.gene041766:CDS |
AGCTTGTTACTAAGATTGAT+AGG | 0.481965 | 1.1:-68985185 | MS.gene041766:CDS |
ACAGTCAGCTTGGGATGTTC+CGG | 0.483896 | 1.1:+68986076 | None:intergenic |
AGCTAGCAGCCTCCTTGGCT+GGG | 0.486002 | 1.1:+68985310 | None:intergenic |
TACAAACCTTGACTGGTACA+AGG | 0.490199 | 1.1:-68985655 | MS.gene041766:CDS |
TCATCCTATTTGAAGAAGGT+TGG | 0.491235 | 1.1:-68985747 | MS.gene041766:CDS |
GATTGATAGGCGTTCTGGTA+AGG | 0.495592 | 1.1:-68985172 | MS.gene041766:CDS |
ATCTCCCTCAAAACCAGAGA+TGG | 0.496573 | 1.1:+68985695 | None:intergenic |
TGAGAACGGCACAGTCAGCT+TGG | 0.498317 | 1.1:+68986066 | None:intergenic |
CTGACCATCCTTAGAAATAC+CGG | 0.501461 | 1.1:+68986013 | None:intergenic |
AGTTTCATCCTATTTGAAGA+AGG | 0.501588 | 1.1:-68985751 | MS.gene041766:CDS |
ATCATTGATTCCACTACTGG+TGG | 0.502099 | 1.1:-68986044 | MS.gene041766:CDS |
GAGAACGGCACAGTCAGCTT+GGG | 0.505334 | 1.1:+68986067 | None:intergenic |
CTTCAGTTGTCAGTCCAGTA+GGG | 0.506099 | 1.1:+68985463 | None:intergenic |
AATTTCATCATATCTACCCT+TGG | 0.508007 | 1.1:+68985782 | None:intergenic |
AATGACAGTGCAGTAGTACT+TGG | 0.509426 | 1.1:+68986139 | None:intergenic |
CATCAAGGCTGTGGAGAAGA+AGG | 0.510945 | 1.1:-68984995 | MS.gene041766:CDS |
AGGAATTGGAACTGTGCCTG+TGG | 0.517140 | 1.1:-68985535 | MS.gene041766:CDS |
GGTCACCTTAAGTCCTCCAC+TGG | 0.520286 | 1.1:+68984969 | None:intergenic |
CAGGATGTCTACAAGATTGG+AGG | 0.523217 | 1.1:-68985555 | MS.gene041766:CDS |
TAATGAAATCCCTGTGTCCA+GGG | 0.528272 | 1.1:+68986111 | None:intergenic |
GAGCCCAAATTCTTGAAGAA+TGG | 0.528480 | 1.1:-68985138 | MS.gene041766:CDS |
TCCCACATTGTCACCAGGAA+GGG | 0.528721 | 1.1:+68985401 | None:intergenic |
CATTGATGCCCCTGGACACA+GGG | 0.535845 | 1.1:-68986120 | MS.gene041766:CDS |
GGAATTGGAACTGTGCCTGT+GGG | 0.536194 | 1.1:-68985534 | MS.gene041766:CDS |
TCATTGATGCCCCTGGACAC+AGG | 0.539611 | 1.1:-68986121 | MS.gene041766:CDS |
CTTCCAGAGAGCAATGTCAA+TGG | 0.541189 | 1.1:+68986172 | None:intergenic |
CATATCAACATTGTGGTCAT+CGG | 0.541947 | 1.1:-68986368 | MS.gene041766:CDS |
AGTCGAAGGGGCTTGTCTGA+AGG | 0.542120 | 1.1:+68985585 | None:intergenic |
CACTTGATCTACAAGCTTGG+AGG | 0.545798 | 1.1:-68986311 | MS.gene041766:CDS |
GGCTTCAAAACCACCAGTAG+TGG | 0.551737 | 1.1:+68986034 | None:intergenic |
TGTGGCTGTTGGCGTCATCA+AGG | 0.552638 | 1.1:-68985010 | MS.gene041766:CDS |
GGTCACTTGATCTACAAGCT+TGG | 0.555547 | 1.1:-68986314 | MS.gene041766:CDS |
CCAGTCTCGACACGCCCCAC+AGG | 0.557031 | 1.1:+68985519 | None:intergenic |
TCAAGGGCCTCAAGAAGGGT+TGG | 0.557590 | 1.1:+68985630 | None:intergenic |
TCAACCACCATGGGCTTGGT+GGG | 0.557624 | 1.1:+68985090 | None:intergenic |
TTGGTCAAGGGCCTCAAGAA+GGG | 0.558003 | 1.1:+68985626 | None:intergenic |
TTGGACCCTTGTACCAGTCA+AGG | 0.558366 | 1.1:+68985649 | None:intergenic |
AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 1.1:+68985988 | None:intergenic |
CTCAAGGCTGAACGTGAAAG+AGG | 0.559327 | 1.1:-68986200 | MS.gene041766:CDS |
TTTGGTCAAGGGCCTCAAGA+AGG | 0.560467 | 1.1:+68985625 | None:intergenic |
TTCTTGAAGAATGGTGATGC+TGG | 0.561159 | 1.1:-68985129 | MS.gene041766:CDS |
TCTGGGAAATCAACCACCAC+TGG | 0.562550 | 1.1:-68986335 | MS.gene041766:CDS |
GAAGCCGGTATTTCTAAGGA+TGG | 0.564413 | 1.1:-68986017 | MS.gene041766:CDS |
ACAAACCTTGACTGGTACAA+GGG | 0.567625 | 1.1:-68985654 | MS.gene041766:CDS |
TCATCGGCCATGTTGACTCT+GGG | 0.571507 | 1.1:-68986352 | MS.gene041766:CDS |
TTCATTAAGAACATGATCAC+CGG | 0.572337 | 1.1:-68986095 | MS.gene041766:CDS |
AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 1.1:+68985989 | None:intergenic |
AGCGCTCTACAAACCTTGAC+TGG | 0.575793 | 1.1:-68985662 | MS.gene041766:CDS |
GAGAAAGTCTCAACCACCAT+GGG | 0.575954 | 1.1:+68985081 | None:intergenic |
ATCCTGAAGTGGTAGTCGAA+GGG | 0.576252 | 1.1:+68985572 | None:intergenic |
CTTGAGCTTGTCAAGGACCC+AGG | 0.577041 | 1.1:+68986217 | None:intergenic |
TATCTACCCTTGGAGTACTT+GGG | 0.580849 | 1.1:+68985792 | None:intergenic |
TTGACAAGCGTGTCATTGAG+AGG | 0.584549 | 1.1:-68986286 | MS.gene041766:CDS |
ATCCCACATTGTCACCAGGA+AGG | 0.585536 | 1.1:+68985400 | None:intergenic |
GAGACTGGTGTCATAAAACC+TGG | 0.585699 | 1.1:-68985504 | MS.gene041766:CDS |
CTGGGTCCTTGACAAGCTCA+AGG | 0.585742 | 1.1:-68986216 | MS.gene041766:CDS |
GGCCCTTCCTGGTGACAATG+TGG | 0.586985 | 1.1:-68985403 | MS.gene041766:CDS |
CTGTTAAGGATCTCAAGCGT+GGG | 0.589274 | 1.1:-68985359 | MS.gene041766:CDS |
CATCCTGAAGTGGTAGTCGA+AGG | 0.591035 | 1.1:+68985571 | None:intergenic |
TTCTCTGAATATCCTCCACT+CGG | 0.591172 | 1.1:-68985063 | MS.gene041766:CDS |
GCCCTTCCTGGTGACAATGT+GGG | 0.592402 | 1.1:-68985402 | MS.gene041766:CDS |
TTGATTTCCCAGAGTCAACA+TGG | 0.596206 | 1.1:+68986345 | None:intergenic |
TAGATATGATGAAATTGTGA+AGG | 0.599770 | 1.1:-68985775 | MS.gene041766:CDS |
GCATGTCTCTAACAGCAAAA+CGG | 0.600985 | 1.1:+68985040 | None:intergenic |
CTCCAAGGATGACCCAGCCA+AGG | 0.602045 | 1.1:-68985322 | MS.gene041766:CDS |
GCGTTCATTCAAGTATGCCT+GGG | 0.605879 | 1.1:-68986234 | MS.gene041766:CDS |
GTCACCTTAAGTCCTCCACT+GGG | 0.606003 | 1.1:+68984970 | None:intergenic |
TCTCCCTCAAAACCAGAGAT+GGG | 0.607478 | 1.1:+68985696 | None:intergenic |
GATGATTCCCACCAAGCCCA+TGG | 0.611182 | 1.1:-68985097 | MS.gene041766:CDS |
TACTACACCCAAGTACTCCA+AGG | 0.613862 | 1.1:-68985799 | MS.gene041766:CDS |
AAAGGTTCATATCAACATTG+TGG | 0.619488 | 1.1:-68986375 | MS.gene041766:CDS |
CAAGGGTCCAACCCTTCTTG+AGG | 0.620566 | 1.1:-68985637 | MS.gene041766:CDS |
TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 1.1:+68985973 | None:intergenic |
ATCTTGTAGACATCCTGAAG+TGG | 0.621388 | 1.1:+68985561 | None:intergenic |
GCTGTTAAGGATCTCAAGCG+TGG | 0.622485 | 1.1:-68985360 | MS.gene041766:CDS |
TGTTGGCGTCATCAAGGCTG+TGG | 0.622557 | 1.1:-68985004 | MS.gene041766:CDS |
TTCAGTTGTCAGTCCAGTAG+GGG | 0.622733 | 1.1:+68985464 | None:intergenic |
AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 1.1:+68985259 | None:intergenic |
GACAACTGAAGTCAAGTCTG+TGG | 0.624055 | 1.1:-68985451 | MS.gene041766:CDS |
ACAGCAAAACGGCCGAGTGG+AGG | 0.624787 | 1.1:+68985051 | None:intergenic |
TGGTGTCATAAAACCTGGAA+TGG | 0.625384 | 1.1:-68985499 | MS.gene041766:CDS |
TCCTGAAGTGGTAGTCGAAG+GGG | 0.627928 | 1.1:+68985573 | None:intergenic |
AGGTGTGGCAGTCAAGAACA+GGG | 0.628146 | 1.1:+68985232 | None:intergenic |
GTTCAGCCTTGAGCTTGTCA+AGG | 0.628494 | 1.1:+68986210 | None:intergenic |
GCATCATGAAGCTCTAACAG+AGG | 0.633418 | 1.1:-68985424 | MS.gene041766:CDS |
GTATGTTGCCTCAAACTCCA+AGG | 0.633897 | 1.1:-68985337 | MS.gene041766:CDS |
AGAGAAAGTCTCAACCACCA+TGG | 0.641605 | 1.1:+68985080 | None:intergenic |
ATGCGTCAAACTGTGGCTGT+TGG | 0.643159 | 1.1:-68985021 | MS.gene041766:CDS |
TTCTGGTAAGGAGATTGAGA+AGG | 0.643722 | 1.1:-68985160 | MS.gene041766:CDS |
GAATTGGAACTGTGCCTGTG+GGG | 0.644316 | 1.1:-68985533 | MS.gene041766:CDS |
AGTGGAATCAATGATGAGAA+CGG | 0.644693 | 1.1:+68986052 | None:intergenic |
AAACTTGACAGCAATGTGAG+AGG | 0.653594 | 1.1:+68985212 | None:intergenic |
AATGAAATCCCTGTGTCCAG+GGG | 0.656838 | 1.1:+68986112 | None:intergenic |
TTAAATCCCACATTGTCACC+AGG | 0.657091 | 1.1:+68985396 | None:intergenic |
AATGATCTGCTGTTGCAACA+AGG | 0.659392 | 1.1:-68985946 | MS.gene041766:intron |
CAAGGATGACCCAGCCAAGG+AGG | 0.659665 | 1.1:-68985319 | MS.gene041766:CDS |
GAGAAGAAGGATCCCAGTGG+AGG | 0.667988 | 1.1:-68984982 | MS.gene041766:CDS |
ACTACACCCAAGTACTCCAA+GGG | 0.678033 | 1.1:-68985798 | MS.gene041766:CDS |
CTTGTAGATCAAGTGACCAG+TGG | 0.682705 | 1.1:+68986319 | None:intergenic |
TAGAGACATGCGTCAAACTG+TGG | 0.690315 | 1.1:-68985028 | MS.gene041766:CDS |
CTAACAGCAAAACGGCCGAG+TGG | 0.692072 | 1.1:+68985048 | None:intergenic |
GTAGATCAAGTGACCAGTGG+TGG | 0.699002 | 1.1:+68986322 | None:intergenic |
GTGATCATAATGAATCACCC+TGG | 0.699056 | 1.1:-68985276 | MS.gene041766:CDS |
GATTCCCACCAAGCCCATGG+TGG | 0.723849 | 1.1:-68985094 | MS.gene041766:CDS |
GGTGTGGCAGTCAAGAACAG+GGG | 0.727394 | 1.1:+68985233 | None:intergenic |
TGACAGCAATGTGAGAGGTG+TGG | 0.729691 | 1.1:+68985217 | None:intergenic |
GTGGAGAAGAAGGATCCCAG+TGG | 0.734762 | 1.1:-68984985 | MS.gene041766:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCAAATTAGTACTTAAATAA+AGG | + | chr1.1:68985463-68985482 | None:intergenic | 15.0% |
!! | AATCAAATATACAACTTCAA+GGG | + | chr1.1:68985428-68985447 | None:intergenic | 20.0% |
!! | TAATCAAATATACAACTTCA+AGG | + | chr1.1:68985429-68985448 | None:intergenic | 20.0% |
! | ATCAAATATACAACTTCAAG+GGG | + | chr1.1:68985427-68985446 | None:intergenic | 25.0% |
! | TAGATATGATGAAATTGTGA+AGG | - | chr1.1:68985556-68985575 | MS.gene041766:CDS | 25.0% |
AAAGGTTCATATCAACATTG+TGG | - | chr1.1:68984956-68984975 | MS.gene041766:CDS | 30.0% | |
AATTTCATCATATCTACCCT+TGG | + | chr1.1:68985552-68985571 | None:intergenic | 30.0% | |
AGTTTCATCCTATTTGAAGA+AGG | - | chr1.1:68985580-68985599 | MS.gene041766:CDS | 30.0% | |
ATCACCATTCTTCAAGAATT+TGG | + | chr1.1:68986200-68986219 | None:intergenic | 30.0% | |
TCACCATTCTTCAAGAATTT+GGG | + | chr1.1:68986199-68986218 | None:intergenic | 30.0% | |
TTCATTAAGAACATGATCAC+CGG | - | chr1.1:68985236-68985255 | MS.gene041766:CDS | 30.0% | |
! | GAACAAATGGAATTTTGTCT+GGG | + | chr1.1:68985616-68985635 | None:intergenic | 30.0% |
!! | AGCTTGTTACTAAGATTGAT+AGG | - | chr1.1:68986146-68986165 | MS.gene041766:CDS | 30.0% |
AGTGGAATCAATGATGAGAA+CGG | + | chr1.1:68985282-68985301 | None:intergenic | 35.0% | |
ATAGCCAACCTTCTTCAAAT+AGG | + | chr1.1:68985591-68985610 | None:intergenic | 35.0% | |
ATCCATCTGTTCAAGATAGA+TGG | + | chr1.1:68985510-68985529 | None:intergenic | 35.0% | |
CATATCAACATTGTGGTCAT+CGG | - | chr1.1:68984963-68984982 | MS.gene041766:CDS | 35.0% | |
TCATCCTATTTGAAGAAGGT+TGG | - | chr1.1:68985584-68985603 | MS.gene041766:CDS | 35.0% | |
! | GGAACAAATGGAATTTTGTC+TGG | + | chr1.1:68985617-68985636 | None:intergenic | 35.0% |
! | TGTCAAGAATGTTGCTGTTA+AGG | - | chr1.1:68985958-68985977 | MS.gene041766:CDS | 35.0% |
!!! | TTTTGAAGCCGGTATTTCTA+AGG | - | chr1.1:68985310-68985329 | MS.gene041766:CDS | 35.0% |
AAACCAGAGATGGGAACAAA+TGG | + | chr1.1:68985629-68985648 | None:intergenic | 40.0% | |
AAACTTGACAGCAATGTGAG+AGG | + | chr1.1:68986122-68986141 | None:intergenic | 40.0% | |
AATGACAGTGCAGTAGTACT+TGG | + | chr1.1:68985195-68985214 | None:intergenic | 40.0% | |
AATGATCTGCTGTTGCAACA+AGG | - | chr1.1:68985385-68985404 | MS.gene041766:CDS | 40.0% | |
ACAAACCTTGACTGGTACAA+GGG | - | chr1.1:68985677-68985696 | MS.gene041766:CDS | 40.0% | |
ACCAAATCAATGAGCCTAAG+AGG | - | chr1.1:68985723-68985742 | MS.gene041766:CDS | 40.0% | |
ACTAAGATTGATAGGCGTTC+TGG | - | chr1.1:68986154-68986173 | MS.gene041766:CDS | 40.0% | |
ATCTTGTAGACATCCTGAAG+TGG | + | chr1.1:68985773-68985792 | None:intergenic | 40.0% | |
ATTCCATTTGTTCCCATCTC+TGG | - | chr1.1:68985623-68985642 | MS.gene041766:CDS | 40.0% | |
CTGACCATCCTTAGAAATAC+CGG | + | chr1.1:68985321-68985340 | None:intergenic | 40.0% | |
CTTCAGGATGTCTACAAGAT+TGG | - | chr1.1:68985773-68985792 | MS.gene041766:CDS | 40.0% | |
GAGCCCAAATTCTTGAAGAA+TGG | - | chr1.1:68986193-68986212 | MS.gene041766:CDS | 40.0% | |
GCATGTCTCTAACAGCAAAA+CGG | + | chr1.1:68986294-68986313 | None:intergenic | 40.0% | |
GTCTACAAGATTGGAGGAAT+TGG | - | chr1.1:68985782-68985801 | MS.gene041766:CDS | 40.0% | |
GTGATCATAATGAATCACCC+TGG | - | chr1.1:68986055-68986074 | MS.gene041766:CDS | 40.0% | |
TAATGAAATCCCTGTGTCCA+GGG | + | chr1.1:68985223-68985242 | None:intergenic | 40.0% | |
TACAAACCTTGACTGGTACA+AGG | - | chr1.1:68985676-68985695 | MS.gene041766:CDS | 40.0% | |
TGCCATCTATCTTGAACAGA+TGG | - | chr1.1:68985505-68985524 | MS.gene041766:CDS | 40.0% | |
TTAAATCCCACATTGTCACC+AGG | + | chr1.1:68985938-68985957 | None:intergenic | 40.0% | |
TTAATGAAATCCCTGTGTCC+AGG | + | chr1.1:68985224-68985243 | None:intergenic | 40.0% | |
TTCTCTGAATATCCTCCACT+CGG | - | chr1.1:68986268-68986287 | MS.gene041766:CDS | 40.0% | |
TTCTGGTAAGGAGATTGAGA+AGG | - | chr1.1:68986171-68986190 | MS.gene041766:CDS | 40.0% | |
TTGATTTCCCAGAGTCAACA+TGG | + | chr1.1:68984989-68985008 | None:intergenic | 40.0% | |
! | ATATCTACCCTTGGAGTACT+TGG | + | chr1.1:68985543-68985562 | None:intergenic | 40.0% |
! | CTTCTTCTTCAATGCTGACT+TGG | + | chr1.1:68986386-68986405 | None:intergenic | 40.0% |
! | TATCTACCCTTGGAGTACTT+GGG | + | chr1.1:68985542-68985561 | None:intergenic | 40.0% |
! | TTCTTGAAGAATGGTGATGC+TGG | - | chr1.1:68986202-68986221 | MS.gene041766:CDS | 40.0% |
!! | AGGCTCATTGATTTGGTCAA+GGG | + | chr1.1:68985720-68985739 | None:intergenic | 40.0% |
!! | ATCATTGATTCCACTACTGG+TGG | - | chr1.1:68985287-68985306 | MS.gene041766:CDS | 40.0% |
!! | CTCATCATTGATTCCACTAC+TGG | - | chr1.1:68985284-68985303 | MS.gene041766:CDS | 40.0% |
!! | TAGGCTCATTGATTTGGTCA+AGG | + | chr1.1:68985721-68985740 | None:intergenic | 40.0% |
!! | TGGTGTCATAAAACCTGGAA+TGG | - | chr1.1:68985832-68985851 | MS.gene041766:intron | 40.0% |
AATGAAATCCCTGTGTCCAG+GGG | + | chr1.1:68985222-68985241 | None:intergenic | 45.0% | |
ACTACACCCAAGTACTCCAA+GGG | - | chr1.1:68985533-68985552 | MS.gene041766:CDS | 45.0% | |
ACTTCAGTTGTCAGTCCAGT+AGG | + | chr1.1:68985872-68985891 | None:intergenic | 45.0% | |
AGAGAAAGTCTCAACCACCA+TGG | + | chr1.1:68986254-68986273 | None:intergenic | 45.0% | |
AGCGTTCATTCAAGTATGCC+TGG | - | chr1.1:68985096-68985115 | MS.gene041766:CDS | 45.0% | |
ATCCTGAAGTGGTAGTCGAA+GGG | + | chr1.1:68985762-68985781 | None:intergenic | 45.0% | |
ATCTCCCTCAAAACCAGAGA+TGG | + | chr1.1:68985639-68985658 | None:intergenic | 45.0% | |
CACTTGATCTACAAGCTTGG+AGG | - | chr1.1:68985020-68985039 | MS.gene041766:CDS | 45.0% | |
CAGGATGTCTACAAGATTGG+AGG | - | chr1.1:68985776-68985795 | MS.gene041766:CDS | 45.0% | |
CTGTTAAGGATCTCAAGCGT+GGG | - | chr1.1:68985972-68985991 | MS.gene041766:CDS | 45.0% | |
CTTCAGTTGTCAGTCCAGTA+GGG | + | chr1.1:68985871-68985890 | None:intergenic | 45.0% | |
CTTCCAGAGAGCAATGTCAA+TGG | + | chr1.1:68985162-68985181 | None:intergenic | 45.0% | |
CTTGTAGATCAAGTGACCAG+TGG | + | chr1.1:68985015-68985034 | None:intergenic | 45.0% | |
GACAACTGAAGTCAAGTCTG+TGG | - | chr1.1:68985880-68985899 | MS.gene041766:intron | 45.0% | |
GAGAAAGTCTCAACCACCAT+GGG | + | chr1.1:68986253-68986272 | None:intergenic | 45.0% | |
GATTGATAGGCGTTCTGGTA+AGG | - | chr1.1:68986159-68986178 | MS.gene041766:CDS | 45.0% | |
GCAAAAGTGACAACCATTCC+AGG | + | chr1.1:68985848-68985867 | None:intergenic | 45.0% | |
GCGTTCATTCAAGTATGCCT+GGG | - | chr1.1:68985097-68985116 | MS.gene041766:CDS | 45.0% | |
GGTCACTTGATCTACAAGCT+TGG | - | chr1.1:68985017-68985036 | MS.gene041766:CDS | 45.0% | |
GTATGTTGCCTCAAACTCCA+AGG | - | chr1.1:68985994-68986013 | MS.gene041766:CDS | 45.0% | |
TACTACACCCAAGTACTCCA+AGG | - | chr1.1:68985532-68985551 | MS.gene041766:CDS | 45.0% | |
TAGAGACATGCGTCAAACTG+TGG | - | chr1.1:68986303-68986322 | MS.gene041766:CDS | 45.0% | |
TCACACCAAGAGTGAAAGCA+AGG | + | chr1.1:68985361-68985380 | None:intergenic | 45.0% | |
TCACCATTGACATTGCTCTC+TGG | - | chr1.1:68985156-68985175 | MS.gene041766:CDS | 45.0% | |
TCTCCCTCAAAACCAGAGAT+GGG | + | chr1.1:68985638-68985657 | None:intergenic | 45.0% | |
TTCAGTTGTCAGTCCAGTAG+GGG | + | chr1.1:68985870-68985889 | None:intergenic | 45.0% | |
! | AAGCAAGGAGAGCATGTTCA+CGG | + | chr1.1:68985346-68985365 | None:intergenic | 45.0% |
! | GAAGCCGGTATTTCTAAGGA+TGG | - | chr1.1:68985314-68985333 | MS.gene041766:CDS | 45.0% |
! | GCATCATGAAGCTCTAACAG+AGG | - | chr1.1:68985907-68985926 | MS.gene041766:intron | 45.0% |
! | GCCTCTTAGGCTCATTGATT+TGG | + | chr1.1:68985727-68985746 | None:intergenic | 45.0% |
! | TTGACAAGCGTGTCATTGAG+AGG | - | chr1.1:68985045-68985064 | MS.gene041766:CDS | 45.0% |
!! | GAGACTGGTGTCATAAAACC+TGG | - | chr1.1:68985827-68985846 | MS.gene041766:intron | 45.0% |
!!! | ACTACTGGTGGTTTTGAAGC+CGG | - | chr1.1:68985299-68985318 | MS.gene041766:CDS | 45.0% |
!!! | GTTCCCATCTCTGGTTTTGA+GGG | - | chr1.1:68985632-68985651 | MS.gene041766:CDS | 45.0% |
!!! | TGTTCCCATCTCTGGTTTTG+AGG | - | chr1.1:68985631-68985650 | MS.gene041766:CDS | 45.0% |
ACAGTCAGCTTGGGATGTTC+CGG | + | chr1.1:68985258-68985277 | None:intergenic | 50.0% | |
AGCCATTTCCAATCTGGCCA+GGG | + | chr1.1:68986075-68986094 | None:intergenic | 50.0% | |
AGCGCTCTACAAACCTTGAC+TGG | - | chr1.1:68985669-68985688 | MS.gene041766:CDS | 50.0% | |
AGGAATTGGAACTGTGCCTG+TGG | - | chr1.1:68985796-68985815 | MS.gene041766:CDS | 50.0% | |
AGGTGTGGCAGTCAAGAACA+GGG | + | chr1.1:68986102-68986121 | None:intergenic | 50.0% | |
AGTAAAGCTAGCAGCCTCCT+TGG | + | chr1.1:68986029-68986048 | None:intergenic | 50.0% | |
ATCCCACATTGTCACCAGGA+AGG | + | chr1.1:68985934-68985953 | None:intergenic | 50.0% | |
ATGAATCACCCTGGCCAGAT+TGG | - | chr1.1:68986064-68986083 | MS.gene041766:CDS | 50.0% | |
ATGCGTCAAACTGTGGCTGT+TGG | - | chr1.1:68986310-68986329 | MS.gene041766:CDS | 50.0% | |
CATCAAGGCTGTGGAGAAGA+AGG | - | chr1.1:68986336-68986355 | MS.gene041766:CDS | 50.0% | |
CATCCTGAAGTGGTAGTCGA+AGG | + | chr1.1:68985763-68985782 | None:intergenic | 50.0% | |
CTCAAGGCTGAACGTGAAAG+AGG | - | chr1.1:68985131-68985150 | MS.gene041766:CDS | 50.0% | |
GAATTGGAACTGTGCCTGTG+GGG | - | chr1.1:68985798-68985817 | MS.gene041766:CDS | 50.0% | |
GCTCTCCTTGCTTTCACTCT+TGG | - | chr1.1:68985353-68985372 | MS.gene041766:CDS | 50.0% | |
GCTGTTAAGGATCTCAAGCG+TGG | - | chr1.1:68985971-68985990 | MS.gene041766:CDS | 50.0% | |
GGAATTGGAACTGTGCCTGT+GGG | - | chr1.1:68985797-68985816 | MS.gene041766:CDS | 50.0% | |
GGCTTCAAAACCACCAGTAG+TGG | + | chr1.1:68985300-68985319 | None:intergenic | 50.0% | |
GGGCATAGCCATTTCCAATC+TGG | + | chr1.1:68986081-68986100 | None:intergenic | 50.0% | |
GTAGATCAAGTGACCAGTGG+TGG | + | chr1.1:68985012-68985031 | None:intergenic | 50.0% | |
GTCACCTTAAGTCCTCCACT+GGG | + | chr1.1:68986364-68986383 | None:intergenic | 50.0% | |
GTTCAGCCTTGAGCTTGTCA+AGG | + | chr1.1:68985124-68985143 | None:intergenic | 50.0% | |
TAGCCATTTCCAATCTGGCC+AGG | + | chr1.1:68986076-68986095 | None:intergenic | 50.0% | |
TCCCACATTGTCACCAGGAA+GGG | + | chr1.1:68985933-68985952 | None:intergenic | 50.0% | |
TCCTGAAGTGGTAGTCGAAG+GGG | + | chr1.1:68985761-68985780 | None:intergenic | 50.0% | |
TCTGGGAAATCAACCACCAC+TGG | - | chr1.1:68984996-68985015 | MS.gene041766:CDS | 50.0% | |
TGACAGCAATGTGAGAGGTG+TGG | + | chr1.1:68986117-68986136 | None:intergenic | 50.0% | |
TGGGTCATCCTTGGAGTTTG+AGG | + | chr1.1:68986005-68986024 | None:intergenic | 50.0% | |
TTGGACCCTTGTACCAGTCA+AGG | + | chr1.1:68985685-68985704 | None:intergenic | 50.0% | |
TTGGTCAAGGGCCTCAAGAA+GGG | + | chr1.1:68985708-68985727 | None:intergenic | 50.0% | |
TTTGGTCAAGGGCCTCAAGA+AGG | + | chr1.1:68985709-68985728 | None:intergenic | 50.0% | |
! | AGCAAGGAGAGCATGTTCAC+GGG | + | chr1.1:68985345-68985364 | None:intergenic | 50.0% |
!! | TCATCGGCCATGTTGACTCT+GGG | - | chr1.1:68984979-68984998 | MS.gene041766:CDS | 50.0% |
!!! | GTTGTCACTTTTGCCCCTAC+TGG | - | chr1.1:68985854-68985873 | MS.gene041766:intron | 50.0% |
AGTCGAAGGGGCTTGTCTGA+AGG | + | chr1.1:68985749-68985768 | None:intergenic | 55.0% | |
AGTCTCAACCACCATGGGCT+TGG | + | chr1.1:68986248-68986267 | None:intergenic | 55.0% | |
CAAGGGTCCAACCCTTCTTG+AGG | - | chr1.1:68985694-68985713 | MS.gene041766:CDS | 55.0% | |
CACCCTGGCCAGATTGGAAA+TGG | - | chr1.1:68986070-68986089 | MS.gene041766:CDS | 55.0% | |
CATTGATGCCCCTGGACACA+GGG | - | chr1.1:68985211-68985230 | MS.gene041766:CDS | 55.0% | |
CTAACAGCAAAACGGCCGAG+TGG | + | chr1.1:68986286-68986305 | None:intergenic | 55.0% | |
CTGGGTCCTTGACAAGCTCA+AGG | - | chr1.1:68985115-68985134 | MS.gene041766:CDS | 55.0% | |
CTTGAGCTTGTCAAGGACCC+AGG | + | chr1.1:68985117-68985136 | None:intergenic | 55.0% | |
GAGAACGGCACAGTCAGCTT+GGG | + | chr1.1:68985267-68985286 | None:intergenic | 55.0% | |
GAGAAGAAGGATCCCAGTGG+AGG | - | chr1.1:68986349-68986368 | MS.gene041766:CDS | 55.0% | |
GAGGTGTGGCAGTCAAGAAC+AGG | + | chr1.1:68986103-68986122 | None:intergenic | 55.0% | |
GATGATTCCCACCAAGCCCA+TGG | - | chr1.1:68986234-68986253 | MS.gene041766:CDS | 55.0% | |
GCCCTTCCTGGTGACAATGT+GGG | - | chr1.1:68985929-68985948 | MS.gene041766:intron | 55.0% | |
GGATCCCAGTGGAGGACTTA+AGG | - | chr1.1:68986357-68986376 | MS.gene041766:CDS | 55.0% | |
GGCTTGTCTGAAGGCCTCTT+AGG | + | chr1.1:68985740-68985759 | None:intergenic | 55.0% | |
GGTCACCTTAAGTCCTCCAC+TGG | + | chr1.1:68986365-68986384 | None:intergenic | 55.0% | |
GGTGTGGCAGTCAAGAACAG+GGG | + | chr1.1:68986101-68986120 | None:intergenic | 55.0% | |
GTGGAGAAGAAGGATCCCAG+TGG | - | chr1.1:68986346-68986365 | MS.gene041766:CDS | 55.0% | |
TCAAGGGCCTCAAGAAGGGT+TGG | + | chr1.1:68985704-68985723 | None:intergenic | 55.0% | |
TCATTGATGCCCCTGGACAC+AGG | - | chr1.1:68985210-68985229 | MS.gene041766:CDS | 55.0% | |
TGAGAACGGCACAGTCAGCT+TGG | + | chr1.1:68985268-68985287 | None:intergenic | 55.0% | |
TGCACTGTCATTGATGCCCC+TGG | - | chr1.1:68985203-68985222 | MS.gene041766:CDS | 55.0% | |
TGTGGCTGTTGGCGTCATCA+AGG | - | chr1.1:68986321-68986340 | MS.gene041766:CDS | 55.0% | |
TGTTGGCGTCATCAAGGCTG+TGG | - | chr1.1:68986327-68986346 | MS.gene041766:CDS | 55.0% | |
! | TCAACCACCATGGGCTTGGT+GGG | + | chr1.1:68986244-68986263 | None:intergenic | 55.0% |
!! | GTCATCGGCCATGTTGACTC+TGG | - | chr1.1:68984978-68984997 | MS.gene041766:CDS | 55.0% |
AAGCTAGCAGCCTCCTTGGC+TGG | + | chr1.1:68986025-68986044 | None:intergenic | 60.0% | |
ACAGCAAAACGGCCGAGTGG+AGG | + | chr1.1:68986283-68986302 | None:intergenic | 60.0% | |
AGCTAGCAGCCTCCTTGGCT+GGG | + | chr1.1:68986024-68986043 | None:intergenic | 60.0% | |
CAAGGATGACCCAGCCAAGG+AGG | - | chr1.1:68986012-68986031 | MS.gene041766:CDS | 60.0% | |
CTCAACCACCATGGGCTTGG+TGG | + | chr1.1:68986245-68986264 | None:intergenic | 60.0% | |
CTCCAAGGATGACCCAGCCA+AGG | - | chr1.1:68986009-68986028 | MS.gene041766:CDS | 60.0% | |
CTCCTTGGCTGGGTCATCCT+TGG | + | chr1.1:68986014-68986033 | None:intergenic | 60.0% | |
GATTCCCACCAAGCCCATGG+TGG | - | chr1.1:68986237-68986256 | MS.gene041766:CDS | 60.0% | |
GCCCCTTCGACTACCACTTC+AGG | - | chr1.1:68985757-68985776 | MS.gene041766:CDS | 60.0% | |
GCTCTAACAGAGGCCCTTCC+TGG | - | chr1.1:68985917-68985936 | MS.gene041766:intron | 60.0% | |
GGCCCTTCCTGGTGACAATG+TGG | - | chr1.1:68985928-68985947 | MS.gene041766:intron | 60.0% | |
CCAGTCTCGACACGCCCCAC+AGG | + | chr1.1:68985815-68985834 | None:intergenic | 70.0% | |
CCTGTGGGGCGTGTCGAGAC+TGG | - | chr1.1:68985812-68985831 | MS.gene041766:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 68984945 | 68986408 | 68984945 | ID=MS.gene041766 |
chr1.1 | mRNA | 68984945 | 68986408 | 68984945 | ID=MS.gene041766.t1;Parent=MS.gene041766 |
chr1.1 | exon | 68985947 | 68986408 | 68985947 | ID=MS.gene041766.t1.exon1;Parent=MS.gene041766.t1 |
chr1.1 | CDS | 68985947 | 68986408 | 68985947 | ID=cds.MS.gene041766.t1;Parent=MS.gene041766.t1 |
chr1.1 | exon | 68984945 | 68985829 | 68984945 | ID=MS.gene041766.t1.exon2;Parent=MS.gene041766.t1 |
chr1.1 | CDS | 68984945 | 68985829 | 68984945 | ID=cds.MS.gene041766.t1;Parent=MS.gene041766.t1 |
Gene Sequence |
Protein sequence |