Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54763.t1 | XP_003591959.2 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 1.60E-259 | 904.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54763.t1 | O24534 | 95.5 | 448 | 19 | 1 | 1 | 448 | 1 | 447 | 9.3e-253 | 873.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54763.t1 | G7I9L3 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 1.1e-259 | 904.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54763.t1 | MTR_1g495705 | 99.777 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 0.0 | 920 |
MS.gene54763.t1 | MTR_1g095650 | 99.777 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 0.0 | 920 |
MS.gene54763.t1 | MTR_1g095703 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 920 |
MS.gene54763.t1 | MTR_4g014810 | 96.205 | 448 | 16 | 1 | 1 | 448 | 1 | 447 | 0.0 | 889 |
MS.gene54763.t1 | MTR_6g021800 | 97.477 | 436 | 11 | 0 | 1 | 436 | 1 | 436 | 0.0 | 887 |
MS.gene54763.t1 | MTR_6g021805 | 97.477 | 436 | 11 | 0 | 1 | 436 | 1 | 436 | 0.0 | 887 |
MS.gene54763.t1 | MTR_1g013680 | 95.565 | 451 | 17 | 1 | 1 | 448 | 1 | 451 | 0.0 | 882 |
MS.gene54763.t1 | MTR_1g085410 | 82.488 | 434 | 76 | 0 | 1 | 434 | 1 | 434 | 0.0 | 743 |
MS.gene54763.t1 | MTR_1g101870 | 81.922 | 437 | 74 | 3 | 1 | 437 | 1 | 432 | 0.0 | 735 |
MS.gene54763.t1 | MTR_1g101870 | 81.922 | 437 | 74 | 3 | 1 | 437 | 1 | 432 | 0.0 | 734 |
MS.gene54763.t1 | MTR_1g024175 | 79.032 | 434 | 91 | 0 | 1 | 434 | 1 | 434 | 0.0 | 726 |
MS.gene54763.t1 | MTR_8g014590 | 79.733 | 449 | 89 | 1 | 1 | 447 | 1 | 449 | 0.0 | 722 |
MS.gene54763.t1 | MTR_1g095650 | 99.712 | 347 | 1 | 0 | 102 | 448 | 1 | 347 | 0.0 | 712 |
MS.gene54763.t1 | MTR_2g082730 | 71.141 | 447 | 111 | 3 | 1 | 445 | 1 | 431 | 0.0 | 644 |
MS.gene54763.t1 | MTR_5g037350 | 67.660 | 470 | 115 | 1 | 3 | 435 | 13 | 482 | 0.0 | 634 |
MS.gene54763.t1 | MTR_1g089520 | 71.163 | 430 | 106 | 3 | 4 | 432 | 5 | 417 | 0.0 | 627 |
MS.gene54763.t1 | MTR_2g082665 | 66.219 | 447 | 107 | 3 | 1 | 445 | 1 | 405 | 0.0 | 586 |
MS.gene54763.t1 | MTR_2g037420 | 65.589 | 433 | 106 | 3 | 1 | 431 | 1 | 392 | 0.0 | 561 |
MS.gene54763.t1 | MTR_8g013910 | 63.920 | 449 | 127 | 5 | 1 | 433 | 1 | 430 | 0.0 | 551 |
MS.gene54763.t1 | MTR_2g080210 | 64.598 | 435 | 118 | 4 | 1 | 432 | 1 | 402 | 0.0 | 550 |
MS.gene54763.t1 | MTR_8g008740 | 78.221 | 326 | 70 | 1 | 1 | 325 | 1 | 326 | 0.0 | 540 |
MS.gene54763.t1 | MTR_1g112460 | 66.107 | 298 | 60 | 4 | 155 | 447 | 1 | 262 | 5.10e-127 | 369 |
MS.gene54763.t1 | MTR_1g495735 | 76.119 | 201 | 38 | 1 | 240 | 430 | 106 | 306 | 4.14e-101 | 304 |
MS.gene54763.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 5.20e-17 | 82.0 |
MS.gene54763.t1 | MTR_6g080420 | 37.963 | 432 | 254 | 6 | 5 | 428 | 89 | 514 | 9.27e-97 | 300 |
MS.gene54763.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 43 | 470 | 1.33e-93 | 291 |
MS.gene54763.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 49 | 476 | 1.58e-93 | 291 |
MS.gene54763.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 70 | 497 | 4.03e-93 | 290 |
MS.gene54763.t1 | MTR_8g087950 | 35.797 | 433 | 269 | 6 | 7 | 433 | 275 | 704 | 4.41e-91 | 291 |
MS.gene54763.t1 | MTR_8g087950 | 35.797 | 433 | 269 | 6 | 7 | 433 | 348 | 777 | 1.97e-90 | 291 |
MS.gene54763.t1 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 8.11e-90 | 274 |
MS.gene54763.t1 | MTR_4g054970 | 56.612 | 242 | 76 | 4 | 193 | 431 | 50 | 265 | 8.66e-81 | 251 |
MS.gene54763.t1 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 7.74e-13 | 68.9 |
MS.gene54763.t1 | MTR_1g024165 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 1.51e-78 | 241 |
MS.gene54763.t1 | MTR_8g014950 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 1.54e-47 | 159 |
MS.gene54763.t1 | MTR_7g094460 | 30.594 | 438 | 244 | 14 | 3 | 429 | 59 | 447 | 5.74e-46 | 165 |
MS.gene54763.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 8.52e-43 | 149 |
MS.gene54763.t1 | MTR_2g021300 | 29.613 | 439 | 247 | 12 | 3 | 429 | 46 | 434 | 4.29e-42 | 154 |
MS.gene54763.t1 | MTR_3g076660 | 29.955 | 444 | 250 | 15 | 3 | 429 | 88 | 487 | 4.94e-41 | 152 |
MS.gene54763.t1 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 213 | 294 | 2 | 83 | 2.38e-28 | 110 |
MS.gene54763.t1 | MTR_3g097250 | 26.471 | 272 | 143 | 9 | 9 | 272 | 85 | 307 | 1.38e-12 | 70.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene54763.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
MS.gene54763.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
MS.gene54763.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
MS.gene54763.t1 | AT1G07920 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
MS.gene54763.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
MS.gene54763.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
MS.gene54763.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
MS.gene54763.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
MS.gene54763.t1 | AT1G07930 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
MS.gene54763.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 529 |
MS.gene54763.t1 | AT1G07930 | 87.179 | 117 | 14 | 1 | 331 | 447 | 254 | 369 | 9.04e-65 | 213 |
MS.gene54763.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 5.85e-94 | 293 |
MS.gene54763.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 5.85e-94 | 293 |
MS.gene54763.t1 | AT1G18070 | 36.927 | 436 | 256 | 6 | 5 | 424 | 99 | 531 | 6.61e-91 | 286 |
MS.gene54763.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 239 | 660 | 2.50e-90 | 288 |
MS.gene54763.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 240 | 661 | 2.55e-90 | 288 |
MS.gene54763.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 240 | 661 | 2.55e-90 | 288 |
MS.gene54763.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 310 | 731 | 1.83e-89 | 287 |
MS.gene54763.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 315 | 736 | 1.94e-89 | 287 |
MS.gene54763.t1 | AT1G35550 | 78.641 | 103 | 22 | 0 | 335 | 437 | 1 | 103 | 1.53e-53 | 174 |
MS.gene54763.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 6.19e-44 | 160 |
MS.gene54763.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 6.19e-44 | 160 |
MS.gene54763.t1 | AT4G02930 | 30.296 | 439 | 245 | 15 | 3 | 429 | 63 | 452 | 7.33e-44 | 160 |
MS.gene54763.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 3.00e-12 | 69.3 |
MS.gene54763.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.42e-11 | 66.2 |
MS.gene54763.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.72e-11 | 66.2 |
MS.gene54763.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 4.14e-11 | 65.5 |
Find 151 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCACCATTCTTCAAGAATT+TGG | 0.066665 | 1.2:+72746482 | None:intergenic |
GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 1.2:-72747337 | MS.gene54763:CDS |
GTCTACAAGATTGGAGGAAT+TGG | 0.315206 | 1.2:-72746897 | MS.gene54763:CDS |
GCCTCTTAGGCTCATTGATT+TGG | 0.315866 | 1.2:+72746955 | None:intergenic |
TGTCAAGAATGTTGCTGTTA+AGG | 0.325240 | 1.2:-72746721 | MS.gene54763:CDS |
TCACCATTCTTCAAGAATTT+GGG | 0.331757 | 1.2:+72746483 | None:intergenic |
ATAGCCAACCTTCTTCAAAT+AGG | 0.332380 | 1.2:+72747091 | None:intergenic |
CTTCTTCTTCAATGCTGACT+TGG | 0.345006 | 1.2:+72746296 | None:intergenic |
CACATCAACATTGTGGTCAT+TGG | 0.354316 | 1.2:-72747727 | MS.gene54763:CDS |
TTCCTTGGCTGGGTCATCCT+TGG | 0.355973 | 1.2:+72746668 | None:intergenic |
AAGTTGGCAGATTCCTTGGC+TGG | 0.367989 | 1.2:+72746657 | None:intergenic |
ATTCCATTTGTTCCCATCTC+TGG | 0.368209 | 1.2:-72747056 | MS.gene54763:CDS |
GCTCTCACAGAGGCCCTTCC+TGG | 0.369900 | 1.2:-72746762 | MS.gene54763:CDS |
ATATCTACCCTTGGAGTACT+TGG | 0.380807 | 1.2:+72747139 | None:intergenic |
ACTAAGATTGATAGGCGTTC+TGG | 0.382761 | 1.2:-72746525 | MS.gene54763:CDS |
TGCGTCAAACTGTGGCTGTT+GGG | 0.386099 | 1.2:-72746368 | MS.gene54763:CDS |
GTCATTGGCCATGTCGACTC+TGG | 0.395247 | 1.2:-72747712 | MS.gene54763:CDS |
GCAAAAGTGACAACCATTCC+AGG | 0.418006 | 1.2:+72746834 | None:intergenic |
CTCATCATTGATTCCACTAC+TGG | 0.419293 | 1.2:-72747406 | MS.gene54763:CDS |
ATGAATCACCCTGGCCAGAT+TGG | 0.425183 | 1.2:-72746615 | MS.gene54763:CDS |
CTTAATGAAATCCCTGTGTC+CGG | 0.429384 | 1.2:+72747468 | None:intergenic |
CCTGTGGGGCGTGTCGAGAC+TGG | 0.431830 | 1.2:-72746867 | MS.gene54763:CDS |
CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 1.2:-72746609 | MS.gene54763:CDS |
GCCCCTCCGACTACCACTTC+AGG | 0.433104 | 1.2:-72746922 | MS.gene54763:CDS |
TGTAAAGTTGGCAGATTCCT+TGG | 0.433201 | 1.2:+72746653 | None:intergenic |
AGCGTTCATTCAAGTATGCC+TGG | 0.444655 | 1.2:-72747594 | MS.gene54763:CDS |
GAGCATAGCCATTTCCAATC+TGG | 0.445726 | 1.2:+72746601 | None:intergenic |
GGCTTGTCTGAAGGCCTCTT+AGG | 0.446650 | 1.2:+72746942 | None:intergenic |
AAACCAGAGATGGGAACAAA+TGG | 0.449170 | 1.2:+72747053 | None:intergenic |
GGTCTGCTTAAGTCCTCCAC+TGG | 0.451209 | 1.2:+72746317 | None:intergenic |
ACTTCAGTTGTCAGTCCAGT+AGG | 0.456008 | 1.2:+72746810 | None:intergenic |
CTTCAGGATGTCTACAAGAT+TGG | 0.458119 | 1.2:-72746906 | MS.gene54763:CDS |
AGTCTCAACCACCATGGGCT+TGG | 0.462350 | 1.2:+72746434 | None:intergenic |
ACCAAATCAATGAGCCTAAG+AGG | 0.463105 | 1.2:-72746956 | MS.gene54763:CDS |
TGGGTCATCCTTGGAGTTTG+AGG | 0.465051 | 1.2:+72746677 | None:intergenic |
CACAAACCTTGACTGGTACA+AGG | 0.466653 | 1.2:-72747003 | MS.gene54763:CDS |
CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 1.2:+72746437 | None:intergenic |
TAGGCTCATTGATTTGGTCA+AGG | 0.472707 | 1.2:+72746961 | None:intergenic |
TTAATGAAATCCCTGTGTCC+GGG | 0.473933 | 1.2:+72747469 | None:intergenic |
AGTCCAAATGGGTAAGGAAA+AGG | 0.474535 | 1.2:-72747752 | None:intergenic |
AGGCTCATTGATTTGGTCAA+GGG | 0.475242 | 1.2:+72746962 | None:intergenic |
AACTTGTTACTAAGATTGAT+AGG | 0.478352 | 1.2:-72746533 | MS.gene54763:CDS |
TAGCCATTTCCAATCTGGCC+AGG | 0.481484 | 1.2:+72746606 | None:intergenic |
TCACCATTGACATTGCTCTC+TGG | 0.481623 | 1.2:-72747534 | MS.gene54763:CDS |
ACAATCAGCTTGGGATGTTC+CGG | 0.483792 | 1.2:+72747435 | None:intergenic |
TCATCCTATTTGAAGAAGGT+TGG | 0.491235 | 1.2:-72747095 | MS.gene54763:CDS |
CTTGTACCAGTCAAGGTTTG+TGG | 0.492698 | 1.2:+72747004 | None:intergenic |
GATTGATAGGCGTTCTGGTA+AGG | 0.495592 | 1.2:-72746520 | MS.gene54763:CDS |
ATCTCCCTCAAAACCAGAGA+TGG | 0.496573 | 1.2:+72747043 | None:intergenic |
CATCAAGGCTGTGGAGAAGA+AGG | 0.499167 | 1.2:-72746343 | MS.gene54763:CDS |
CTGACCATCCTTAGAAATAC+CGG | 0.501461 | 1.2:+72747372 | None:intergenic |
AGTTTCATCCTATTTGAAGA+AGG | 0.501588 | 1.2:-72747099 | MS.gene54763:CDS |
ATCATTGATTCCACTACTGG+TGG | 0.502099 | 1.2:-72747403 | MS.gene54763:CDS |
GAGGTGTGGCAGTCAAGAAC+AGG | 0.504238 | 1.2:+72746579 | None:intergenic |
CTTCAGTTGTCAGTCCAGTA+GGG | 0.506099 | 1.2:+72746811 | None:intergenic |
AATTTCATCATATCTACCCT+TGG | 0.508007 | 1.2:+72747130 | None:intergenic |
AATGACAGTGCAGTAGTACT+TGG | 0.509426 | 1.2:+72747498 | None:intergenic |
CTCTTAAGTCCAAATGGGTA+AGG | 0.512110 | 1.2:-72747758 | None:intergenic |
TGAGAACGGCACAATCAGCT+TGG | 0.516820 | 1.2:+72747425 | None:intergenic |
AGGAATTGGAACTGTGCCTG+TGG | 0.517140 | 1.2:-72746883 | MS.gene54763:CDS |
GATCACTTGAGATGTAAAGT+TGG | 0.519518 | 1.2:+72746641 | None:intergenic |
CAGGATGTCTACAAGATTGG+AGG | 0.523217 | 1.2:-72746903 | MS.gene54763:CDS |
GAGCCCAAATTCTTGAAGAA+TGG | 0.528480 | 1.2:-72746486 | MS.gene54763:CDS |
TCCCACATTGTCACCAGGAA+GGG | 0.528721 | 1.2:+72746749 | None:intergenic |
AGTCGGAGGGGCTTGTCTGA+AGG | 0.529275 | 1.2:+72746933 | None:intergenic |
GAGAACGGCACAATCAGCTT+GGG | 0.529995 | 1.2:+72747426 | None:intergenic |
TGTTGGGGTCATCAAGGCTG+TGG | 0.532596 | 1.2:-72746352 | MS.gene54763:CDS |
GGAATTGGAACTGTGCCTGT+GGG | 0.536194 | 1.2:-72746882 | MS.gene54763:CDS |
CTTCCAGAGAGCAATGTCAA+TGG | 0.541189 | 1.2:+72747531 | None:intergenic |
AGCAAACTTGACAGCAATGT+GGG | 0.543557 | 1.2:+72746557 | None:intergenic |
TGCACTGTCATTGATGCCCC+CGG | 0.544718 | 1.2:-72747487 | MS.gene54763:CDS |
CACTTGATCTACAAGCTTGG+AGG | 0.545798 | 1.2:-72747670 | MS.gene54763:CDS |
TGTGGCTGTTGGGGTCATCA+AGG | 0.547535 | 1.2:-72746358 | MS.gene54763:CDS |
GTCTGCTTAAGTCCTCCACT+GGG | 0.549538 | 1.2:+72746318 | None:intergenic |
GGCTTCAAAACCACCAGTAG+TGG | 0.551737 | 1.2:+72747393 | None:intergenic |
GGTCACTTGATCTACAAGCT+TGG | 0.555547 | 1.2:-72747673 | MS.gene54763:CDS |
CCAGTCTCGACACGCCCCAC+AGG | 0.557031 | 1.2:+72746867 | None:intergenic |
TCAAGGGCCTCAAGAAGGGT+TGG | 0.557590 | 1.2:+72746978 | None:intergenic |
TCAACCACCATGGGCTTGGT+GGG | 0.557624 | 1.2:+72746438 | None:intergenic |
TTGGTCAAGGGCCTCAAGAA+GGG | 0.558003 | 1.2:+72746974 | None:intergenic |
TTGGACCCTTGTACCAGTCA+AGG | 0.558366 | 1.2:+72746997 | None:intergenic |
AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 1.2:+72747347 | None:intergenic |
TCATTGGCCATGTCGACTCT+GGG | 0.559180 | 1.2:-72747711 | MS.gene54763:CDS |
CTCAAGGCTGAACGTGAAAG+AGG | 0.559327 | 1.2:-72747559 | MS.gene54763:CDS |
TTTGGTCAAGGGCCTCAAGA+AGG | 0.560467 | 1.2:+72746973 | None:intergenic |
TTCTTGAAGAATGGTGATGC+TGG | 0.561159 | 1.2:-72746477 | MS.gene54763:CDS |
AGCGCTCCACAAACCTTGAC+TGG | 0.561686 | 1.2:-72747010 | MS.gene54763:CDS |
GAAGCCGGTATTTCTAAGGA+TGG | 0.564413 | 1.2:-72747376 | MS.gene54763:CDS |
TCTGGGAAATCAACCACCAC+TGG | 0.564990 | 1.2:-72747694 | MS.gene54763:CDS |
ACAAACCTTGACTGGTACAA+GGG | 0.567625 | 1.2:-72747002 | MS.gene54763:CDS |
TAATGAAATCCCTGTGTCCG+GGG | 0.570266 | 1.2:+72747470 | None:intergenic |
ATGCGTCAAACTGTGGCTGT+TGG | 0.571110 | 1.2:-72746369 | MS.gene54763:CDS |
TTCATTAAGAACATGATCAC+CGG | 0.572337 | 1.2:-72747454 | MS.gene54763:CDS |
AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 1.2:+72747348 | None:intergenic |
GAGAAAGTCTCAACCACCAT+GGG | 0.575954 | 1.2:+72746429 | None:intergenic |
ATCCTGAAGTGGTAGTCGGA+GGG | 0.576252 | 1.2:+72746920 | None:intergenic |
CTTGAGCTTGTCAAGGACCC+AGG | 0.577041 | 1.2:+72747576 | None:intergenic |
TATCTACCCTTGGAGTACTT+GGG | 0.580849 | 1.2:+72747140 | None:intergenic |
GCGTCAAACTGTGGCTGTTG+GGG | 0.582443 | 1.2:-72746367 | MS.gene54763:CDS |
ATCCCACATTGTCACCAGGA+AGG | 0.585536 | 1.2:+72746748 | None:intergenic |
GAGACTGGTGTCATAAAACC+TGG | 0.585699 | 1.2:-72746852 | MS.gene54763:CDS |
CTGGGTCCTTGACAAGCTCA+AGG | 0.585742 | 1.2:-72747575 | MS.gene54763:CDS |
AGTTGGCAGATTCCTTGGCT+GGG | 0.586600 | 1.2:+72746658 | None:intergenic |
GGCCCTTCCTGGTGACAATG+TGG | 0.586985 | 1.2:-72746751 | MS.gene54763:CDS |
TTGATTTCCCAGAGTCGACA+TGG | 0.588973 | 1.2:+72747704 | None:intergenic |
CTGTTAAGGATCTCAAGCGT+GGG | 0.589274 | 1.2:-72746707 | MS.gene54763:CDS |
TTCTCTGAATATCCTCCACT+CGG | 0.591172 | 1.2:-72746411 | MS.gene54763:CDS |
GCCCTTCCTGGTGACAATGT+GGG | 0.592402 | 1.2:-72746750 | MS.gene54763:CDS |
CTCCAAGGATGACCCAGCCA+AGG | 0.595225 | 1.2:-72746670 | MS.gene54763:CDS |
TAGATATGATGAAATTGTGA+AGG | 0.599770 | 1.2:-72747123 | MS.gene54763:CDS |
GCATGTCTCTAACAGCAAAA+CGG | 0.600985 | 1.2:+72746388 | None:intergenic |
GCGTTCATTCAAGTATGCCT+GGG | 0.605879 | 1.2:-72747593 | MS.gene54763:CDS |
GATGATTCCCACCAAGCCCA+TGG | 0.606444 | 1.2:-72746445 | MS.gene54763:CDS |
TCTCCCTCAAAACCAGAGAT+GGG | 0.607478 | 1.2:+72747044 | None:intergenic |
TCCTGAAGTGGTAGTCGGAG+GGG | 0.608492 | 1.2:+72746921 | None:intergenic |
TACTACACCCAAGTACTCCA+AGG | 0.613862 | 1.2:-72747147 | MS.gene54763:CDS |
CAAGGGTCCAACCCTTCTTG+AGG | 0.620566 | 1.2:-72746985 | MS.gene54763:CDS |
TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 1.2:+72747332 | None:intergenic |
ATCTTGTAGACATCCTGAAG+TGG | 0.621388 | 1.2:+72746909 | None:intergenic |
GCTGTTAAGGATCTCAAGCG+TGG | 0.622485 | 1.2:-72746708 | MS.gene54763:CDS |
TTCAGTTGTCAGTCCAGTAG+GGG | 0.622733 | 1.2:+72746812 | None:intergenic |
AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 1.2:+72746607 | None:intergenic |
GACAACTGAAGTCAAGTCTG+TGG | 0.624055 | 1.2:-72746799 | MS.gene54763:CDS |
ACAGCAAAACGGCCGAGTGG+AGG | 0.624787 | 1.2:+72746399 | None:intergenic |
TTGACAAGCGTGTCATCGAG+AGG | 0.625348 | 1.2:-72747645 | MS.gene54763:CDS |
TGGTGTCATAAAACCTGGAA+TGG | 0.625384 | 1.2:-72746847 | MS.gene54763:CDS |
GTTCAGCCTTGAGCTTGTCA+AGG | 0.628494 | 1.2:+72747569 | None:intergenic |
GTATGTTGCCTCAAACTCCA+AGG | 0.633897 | 1.2:-72746685 | MS.gene54763:CDS |
CATCCTGAAGTGGTAGTCGG+AGG | 0.637451 | 1.2:+72746919 | None:intergenic |
AGACATCCTGAAGTGGTAGT+CGG | 0.638051 | 1.2:+72746916 | None:intergenic |
CAGCAAACTTGACAGCAATG+TGG | 0.640811 | 1.2:+72746556 | None:intergenic |
AGAGAAAGTCTCAACCACCA+TGG | 0.641605 | 1.2:+72746428 | None:intergenic |
TTCTGGTAAGGAGATTGAGA+AGG | 0.643722 | 1.2:-72746508 | MS.gene54763:CDS |
GAATTGGAACTGTGCCTGTG+GGG | 0.644316 | 1.2:-72746881 | MS.gene54763:CDS |
AGTGGAATCAATGATGAGAA+CGG | 0.644693 | 1.2:+72747411 | None:intergenic |
TGACAGCAATGTGGGAGGTG+TGG | 0.650950 | 1.2:+72746565 | None:intergenic |
TTAAATCCCACATTGTCACC+AGG | 0.657091 | 1.2:+72746744 | None:intergenic |
AATGATCTGCTGTTGCAACA+AGG | 0.659392 | 1.2:-72747305 | MS.gene54763:intron |
AATGAAATCCCTGTGTCCGG+GGG | 0.661737 | 1.2:+72747471 | None:intergenic |
GAGAAGAAGGATCCCAGTGG+AGG | 0.667988 | 1.2:-72746330 | MS.gene54763:CDS |
AAAGGTTCACATCAACATTG+TGG | 0.675059 | 1.2:-72747734 | MS.gene54763:CDS |
ACTACACCCAAGTACTCCAA+GGG | 0.678033 | 1.2:-72747146 | MS.gene54763:CDS |
CTTGTAGATCAAGTGACCAG+TGG | 0.682705 | 1.2:+72747678 | None:intergenic |
TAGAGACATGCGTCAAACTG+TGG | 0.690315 | 1.2:-72746376 | MS.gene54763:CDS |
CTAACAGCAAAACGGCCGAG+TGG | 0.692072 | 1.2:+72746396 | None:intergenic |
AAACTTGACAGCAATGTGGG+AGG | 0.695398 | 1.2:+72746560 | None:intergenic |
GTAGATCAAGTGACCAGTGG+TGG | 0.699002 | 1.2:+72747681 | None:intergenic |
GTGATCATAATGAATCACCC+TGG | 0.699056 | 1.2:-72746624 | MS.gene54763:CDS |
GATTCCCACCAAGCCCATGG+TGG | 0.723849 | 1.2:-72746442 | MS.gene54763:CDS |
GTGGAGAAGAAGGATCCCAG+TGG | 0.734762 | 1.2:-72746333 | MS.gene54763:CDS |
GCATCATGAAGCTCTCACAG+AGG | 0.758446 | 1.2:-72746772 | MS.gene54763:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAAATATACAACTTCAA+GGG | + | chr1.2:72746776-72746795 | None:intergenic | 15.0% |
!! | TAATAAAATATACAACTTCA+AGG | + | chr1.2:72746777-72746796 | None:intergenic | 15.0% |
!! | ATAAAATATACAACTTCAAG+GGG | + | chr1.2:72746775-72746794 | None:intergenic | 20.0% |
! | TAGATATGATGAAATTGTGA+AGG | - | chr1.2:72746915-72746934 | MS.gene54763:CDS | 25.0% |
!!! | AACTTGTTACTAAGATTGAT+AGG | - | chr1.2:72747505-72747524 | MS.gene54763:CDS | 25.0% |
AATTTCATCATATCTACCCT+TGG | + | chr1.2:72746911-72746930 | None:intergenic | 30.0% | |
AGTTTCATCCTATTTGAAGA+AGG | - | chr1.2:72746939-72746958 | MS.gene54763:CDS | 30.0% | |
ATCACCATTCTTCAAGAATT+TGG | + | chr1.2:72747559-72747578 | None:intergenic | 30.0% | |
TCACCATTCTTCAAGAATTT+GGG | + | chr1.2:72747558-72747577 | None:intergenic | 30.0% | |
TTCATTAAGAACATGATCAC+CGG | - | chr1.2:72746584-72746603 | MS.gene54763:CDS | 30.0% | |
! | GAACAAATGGAATTTTGTCT+GGG | + | chr1.2:72746975-72746994 | None:intergenic | 30.0% |
AAAGGTTCACATCAACATTG+TGG | - | chr1.2:72746304-72746323 | MS.gene54763:CDS | 35.0% | |
AGTGGAATCAATGATGAGAA+CGG | + | chr1.2:72746630-72746649 | None:intergenic | 35.0% | |
ATAGCCAACCTTCTTCAAAT+AGG | + | chr1.2:72746950-72746969 | None:intergenic | 35.0% | |
ATCCATCTGTTCAAGATAGA+TGG | + | chr1.2:72746869-72746888 | None:intergenic | 35.0% | |
GATCACTTGAGATGTAAAGT+TGG | + | chr1.2:72747400-72747419 | None:intergenic | 35.0% | |
TCATCCTATTTGAAGAAGGT+TGG | - | chr1.2:72746943-72746962 | MS.gene54763:CDS | 35.0% | |
! | GGAACAAATGGAATTTTGTC+TGG | + | chr1.2:72746976-72746995 | None:intergenic | 35.0% |
! | TGTCAAGAATGTTGCTGTTA+AGG | - | chr1.2:72747317-72747336 | MS.gene54763:CDS | 35.0% |
!!! | TTTTGAAGCCGGTATTTCTA+AGG | - | chr1.2:72746658-72746677 | MS.gene54763:CDS | 35.0% |
AAACCAGAGATGGGAACAAA+TGG | + | chr1.2:72746988-72747007 | None:intergenic | 40.0% | |
AATGACAGTGCAGTAGTACT+TGG | + | chr1.2:72746543-72746562 | None:intergenic | 40.0% | |
AATGATCTGCTGTTGCAACA+AGG | - | chr1.2:72746733-72746752 | MS.gene54763:CDS | 40.0% | |
ACAAACCTTGACTGGTACAA+GGG | - | chr1.2:72747036-72747055 | MS.gene54763:CDS | 40.0% | |
ACCAAATCAATGAGCCTAAG+AGG | - | chr1.2:72747082-72747101 | MS.gene54763:CDS | 40.0% | |
ACTAAGATTGATAGGCGTTC+TGG | - | chr1.2:72747513-72747532 | MS.gene54763:CDS | 40.0% | |
AGCAAACTTGACAGCAATGT+GGG | + | chr1.2:72747484-72747503 | None:intergenic | 40.0% | |
ATCTTGTAGACATCCTGAAG+TGG | + | chr1.2:72747132-72747151 | None:intergenic | 40.0% | |
ATTCCATTTGTTCCCATCTC+TGG | - | chr1.2:72746982-72747001 | MS.gene54763:CDS | 40.0% | |
CACATCAACATTGTGGTCAT+TGG | - | chr1.2:72746311-72746330 | MS.gene54763:CDS | 40.0% | |
CTGACCATCCTTAGAAATAC+CGG | + | chr1.2:72746669-72746688 | None:intergenic | 40.0% | |
CTTAATGAAATCCCTGTGTC+CGG | + | chr1.2:72746573-72746592 | None:intergenic | 40.0% | |
CTTCAGGATGTCTACAAGAT+TGG | - | chr1.2:72747132-72747151 | MS.gene54763:CDS | 40.0% | |
GAGCCCAAATTCTTGAAGAA+TGG | - | chr1.2:72747552-72747571 | MS.gene54763:CDS | 40.0% | |
GCATGTCTCTAACAGCAAAA+CGG | + | chr1.2:72747653-72747672 | None:intergenic | 40.0% | |
GTCTACAAGATTGGAGGAAT+TGG | - | chr1.2:72747141-72747160 | MS.gene54763:CDS | 40.0% | |
GTGATCATAATGAATCACCC+TGG | - | chr1.2:72747414-72747433 | MS.gene54763:CDS | 40.0% | |
TGCCATCTATCTTGAACAGA+TGG | - | chr1.2:72746864-72746883 | MS.gene54763:CDS | 40.0% | |
TGTAAAGTTGGCAGATTCCT+TGG | + | chr1.2:72747388-72747407 | None:intergenic | 40.0% | |
TTAAATCCCACATTGTCACC+AGG | + | chr1.2:72747297-72747316 | None:intergenic | 40.0% | |
TTAATGAAATCCCTGTGTCC+GGG | + | chr1.2:72746572-72746591 | None:intergenic | 40.0% | |
TTCTCTGAATATCCTCCACT+CGG | - | chr1.2:72747627-72747646 | MS.gene54763:CDS | 40.0% | |
TTCTGGTAAGGAGATTGAGA+AGG | - | chr1.2:72747530-72747549 | MS.gene54763:CDS | 40.0% | |
! | ATATCTACCCTTGGAGTACT+TGG | + | chr1.2:72746902-72746921 | None:intergenic | 40.0% |
! | CTTCTTCTTCAATGCTGACT+TGG | + | chr1.2:72747745-72747764 | None:intergenic | 40.0% |
! | TATCTACCCTTGGAGTACTT+GGG | + | chr1.2:72746901-72746920 | None:intergenic | 40.0% |
! | TTCTTGAAGAATGGTGATGC+TGG | - | chr1.2:72747561-72747580 | MS.gene54763:CDS | 40.0% |
!! | AGGCTCATTGATTTGGTCAA+GGG | + | chr1.2:72747079-72747098 | None:intergenic | 40.0% |
!! | ATCATTGATTCCACTACTGG+TGG | - | chr1.2:72746635-72746654 | MS.gene54763:CDS | 40.0% |
!! | CTCATCATTGATTCCACTAC+TGG | - | chr1.2:72746632-72746651 | MS.gene54763:CDS | 40.0% |
!! | TAGGCTCATTGATTTGGTCA+AGG | + | chr1.2:72747080-72747099 | None:intergenic | 40.0% |
!! | TGGTGTCATAAAACCTGGAA+TGG | - | chr1.2:72747191-72747210 | MS.gene54763:intron | 40.0% |
AAACTTGACAGCAATGTGGG+AGG | + | chr1.2:72747481-72747500 | None:intergenic | 45.0% | |
ACAATCAGCTTGGGATGTTC+CGG | + | chr1.2:72746606-72746625 | None:intergenic | 45.0% | |
ACTACACCCAAGTACTCCAA+GGG | - | chr1.2:72746892-72746911 | MS.gene54763:CDS | 45.0% | |
ACTTCAGTTGTCAGTCCAGT+AGG | + | chr1.2:72747231-72747250 | None:intergenic | 45.0% | |
AGACATCCTGAAGTGGTAGT+CGG | + | chr1.2:72747125-72747144 | None:intergenic | 45.0% | |
AGAGAAAGTCTCAACCACCA+TGG | + | chr1.2:72747613-72747632 | None:intergenic | 45.0% | |
AGCGTTCATTCAAGTATGCC+TGG | - | chr1.2:72746444-72746463 | MS.gene54763:CDS | 45.0% | |
ATCTCCCTCAAAACCAGAGA+TGG | + | chr1.2:72746998-72747017 | None:intergenic | 45.0% | |
CACAAACCTTGACTGGTACA+AGG | - | chr1.2:72747035-72747054 | MS.gene54763:CDS | 45.0% | |
CACTTGATCTACAAGCTTGG+AGG | - | chr1.2:72746368-72746387 | MS.gene54763:CDS | 45.0% | |
CAGCAAACTTGACAGCAATG+TGG | + | chr1.2:72747485-72747504 | None:intergenic | 45.0% | |
CAGGATGTCTACAAGATTGG+AGG | - | chr1.2:72747135-72747154 | MS.gene54763:CDS | 45.0% | |
CTGTTAAGGATCTCAAGCGT+GGG | - | chr1.2:72747331-72747350 | MS.gene54763:CDS | 45.0% | |
CTTCAGTTGTCAGTCCAGTA+GGG | + | chr1.2:72747230-72747249 | None:intergenic | 45.0% | |
CTTCCAGAGAGCAATGTCAA+TGG | + | chr1.2:72746510-72746529 | None:intergenic | 45.0% | |
CTTGTACCAGTCAAGGTTTG+TGG | + | chr1.2:72747037-72747056 | None:intergenic | 45.0% | |
CTTGTAGATCAAGTGACCAG+TGG | + | chr1.2:72746363-72746382 | None:intergenic | 45.0% | |
GACAACTGAAGTCAAGTCTG+TGG | - | chr1.2:72747239-72747258 | MS.gene54763:intron | 45.0% | |
GAGAAAGTCTCAACCACCAT+GGG | + | chr1.2:72747612-72747631 | None:intergenic | 45.0% | |
GAGCATAGCCATTTCCAATC+TGG | + | chr1.2:72747440-72747459 | None:intergenic | 45.0% | |
GATTGATAGGCGTTCTGGTA+AGG | - | chr1.2:72747518-72747537 | MS.gene54763:CDS | 45.0% | |
GCAAAAGTGACAACCATTCC+AGG | + | chr1.2:72747207-72747226 | None:intergenic | 45.0% | |
GCGTTCATTCAAGTATGCCT+GGG | - | chr1.2:72746445-72746464 | MS.gene54763:CDS | 45.0% | |
GGTCACTTGATCTACAAGCT+TGG | - | chr1.2:72746365-72746384 | MS.gene54763:CDS | 45.0% | |
GTATGTTGCCTCAAACTCCA+AGG | - | chr1.2:72747353-72747372 | MS.gene54763:CDS | 45.0% | |
TAATGAAATCCCTGTGTCCG+GGG | + | chr1.2:72746571-72746590 | None:intergenic | 45.0% | |
TACTACACCCAAGTACTCCA+AGG | - | chr1.2:72746891-72746910 | MS.gene54763:CDS | 45.0% | |
TAGAGACATGCGTCAAACTG+TGG | - | chr1.2:72747662-72747681 | MS.gene54763:CDS | 45.0% | |
TCACACCAAGAGTGAAAGCA+AGG | + | chr1.2:72746709-72746728 | None:intergenic | 45.0% | |
TCACCATTGACATTGCTCTC+TGG | - | chr1.2:72746504-72746523 | MS.gene54763:CDS | 45.0% | |
TCTCCCTCAAAACCAGAGAT+GGG | + | chr1.2:72746997-72747016 | None:intergenic | 45.0% | |
TTCAGTTGTCAGTCCAGTAG+GGG | + | chr1.2:72747229-72747248 | None:intergenic | 45.0% | |
TTGATTTCCCAGAGTCGACA+TGG | + | chr1.2:72746337-72746356 | None:intergenic | 45.0% | |
! | AAGCAAGGAGAGCATGTTCA+CGG | + | chr1.2:72746694-72746713 | None:intergenic | 45.0% |
! | GAAGCCGGTATTTCTAAGGA+TGG | - | chr1.2:72746662-72746681 | MS.gene54763:CDS | 45.0% |
! | GCCTCTTAGGCTCATTGATT+TGG | + | chr1.2:72747086-72747105 | None:intergenic | 45.0% |
!! | GAGACTGGTGTCATAAAACC+TGG | - | chr1.2:72747186-72747205 | MS.gene54763:intron | 45.0% |
!!! | ACTACTGGTGGTTTTGAAGC+CGG | - | chr1.2:72746647-72746666 | MS.gene54763:CDS | 45.0% |
!!! | GTTCCCATCTCTGGTTTTGA+GGG | - | chr1.2:72746991-72747010 | MS.gene54763:CDS | 45.0% |
!!! | TGTTCCCATCTCTGGTTTTG+AGG | - | chr1.2:72746990-72747009 | MS.gene54763:CDS | 45.0% |
AAGTTGGCAGATTCCTTGGC+TGG | + | chr1.2:72747384-72747403 | None:intergenic | 50.0% | |
AATGAAATCCCTGTGTCCGG+GGG | + | chr1.2:72746570-72746589 | None:intergenic | 50.0% | |
AGCCATTTCCAATCTGGCCA+GGG | + | chr1.2:72747434-72747453 | None:intergenic | 50.0% | |
AGGAATTGGAACTGTGCCTG+TGG | - | chr1.2:72747155-72747174 | MS.gene54763:CDS | 50.0% | |
AGTTGGCAGATTCCTTGGCT+GGG | + | chr1.2:72747383-72747402 | None:intergenic | 50.0% | |
ATCCCACATTGTCACCAGGA+AGG | + | chr1.2:72747293-72747312 | None:intergenic | 50.0% | |
ATCCTGAAGTGGTAGTCGGA+GGG | + | chr1.2:72747121-72747140 | None:intergenic | 50.0% | |
ATGAATCACCCTGGCCAGAT+TGG | - | chr1.2:72747423-72747442 | MS.gene54763:CDS | 50.0% | |
ATGCGTCAAACTGTGGCTGT+TGG | - | chr1.2:72747669-72747688 | MS.gene54763:CDS | 50.0% | |
CATCAAGGCTGTGGAGAAGA+AGG | - | chr1.2:72747695-72747714 | MS.gene54763:CDS | 50.0% | |
CTCAAGGCTGAACGTGAAAG+AGG | - | chr1.2:72746479-72746498 | MS.gene54763:CDS | 50.0% | |
GAATTGGAACTGTGCCTGTG+GGG | - | chr1.2:72747157-72747176 | MS.gene54763:CDS | 50.0% | |
GAGAACGGCACAATCAGCTT+GGG | + | chr1.2:72746615-72746634 | None:intergenic | 50.0% | |
GCATCATGAAGCTCTCACAG+AGG | - | chr1.2:72747266-72747285 | MS.gene54763:intron | 50.0% | |
GCTCTCCTTGCTTTCACTCT+TGG | - | chr1.2:72746701-72746720 | MS.gene54763:CDS | 50.0% | |
GCTGTTAAGGATCTCAAGCG+TGG | - | chr1.2:72747330-72747349 | MS.gene54763:CDS | 50.0% | |
GGAATTGGAACTGTGCCTGT+GGG | - | chr1.2:72747156-72747175 | MS.gene54763:CDS | 50.0% | |
GGCTTCAAAACCACCAGTAG+TGG | + | chr1.2:72746648-72746667 | None:intergenic | 50.0% | |
GTAGATCAAGTGACCAGTGG+TGG | + | chr1.2:72746360-72746379 | None:intergenic | 50.0% | |
GTCTGCTTAAGTCCTCCACT+GGG | + | chr1.2:72747723-72747742 | None:intergenic | 50.0% | |
GTTCAGCCTTGAGCTTGTCA+AGG | + | chr1.2:72746472-72746491 | None:intergenic | 50.0% | |
TAGCCATTTCCAATCTGGCC+AGG | + | chr1.2:72747435-72747454 | None:intergenic | 50.0% | |
TCCCACATTGTCACCAGGAA+GGG | + | chr1.2:72747292-72747311 | None:intergenic | 50.0% | |
TCTGGGAAATCAACCACCAC+TGG | - | chr1.2:72746344-72746363 | MS.gene54763:CDS | 50.0% | |
TGAGAACGGCACAATCAGCT+TGG | + | chr1.2:72746616-72746635 | None:intergenic | 50.0% | |
TGCGTCAAACTGTGGCTGTT+GGG | - | chr1.2:72747670-72747689 | MS.gene54763:CDS | 50.0% | |
TGGGTCATCCTTGGAGTTTG+AGG | + | chr1.2:72747364-72747383 | None:intergenic | 50.0% | |
TTGACAAGCGTGTCATCGAG+AGG | - | chr1.2:72746393-72746412 | MS.gene54763:CDS | 50.0% | |
TTGGACCCTTGTACCAGTCA+AGG | + | chr1.2:72747044-72747063 | None:intergenic | 50.0% | |
TTGGTCAAGGGCCTCAAGAA+GGG | + | chr1.2:72747067-72747086 | None:intergenic | 50.0% | |
TTTGGTCAAGGGCCTCAAGA+AGG | + | chr1.2:72747068-72747087 | None:intergenic | 50.0% | |
! | AGCAAGGAGAGCATGTTCAC+GGG | + | chr1.2:72746693-72746712 | None:intergenic | 50.0% |
!! | TCATTGGCCATGTCGACTCT+GGG | - | chr1.2:72746327-72746346 | MS.gene54763:CDS | 50.0% |
!!! | GTTGTCACTTTTGCCCCTAC+TGG | - | chr1.2:72747213-72747232 | MS.gene54763:intron | 50.0% |
AGCGCTCCACAAACCTTGAC+TGG | - | chr1.2:72747028-72747047 | MS.gene54763:CDS | 55.0% | |
AGTCTCAACCACCATGGGCT+TGG | + | chr1.2:72747607-72747626 | None:intergenic | 55.0% | |
CAAGGGTCCAACCCTTCTTG+AGG | - | chr1.2:72747053-72747072 | MS.gene54763:CDS | 55.0% | |
CACCCTGGCCAGATTGGAAA+TGG | - | chr1.2:72747429-72747448 | MS.gene54763:CDS | 55.0% | |
CATCCTGAAGTGGTAGTCGG+AGG | + | chr1.2:72747122-72747141 | None:intergenic | 55.0% | |
CTAACAGCAAAACGGCCGAG+TGG | + | chr1.2:72747645-72747664 | None:intergenic | 55.0% | |
CTGGGTCCTTGACAAGCTCA+AGG | - | chr1.2:72746463-72746482 | MS.gene54763:CDS | 55.0% | |
CTTGAGCTTGTCAAGGACCC+AGG | + | chr1.2:72746465-72746484 | None:intergenic | 55.0% | |
GAGAAGAAGGATCCCAGTGG+AGG | - | chr1.2:72747708-72747727 | MS.gene54763:CDS | 55.0% | |
GAGGTGTGGCAGTCAAGAAC+AGG | + | chr1.2:72747462-72747481 | None:intergenic | 55.0% | |
GATGATTCCCACCAAGCCCA+TGG | - | chr1.2:72747593-72747612 | MS.gene54763:CDS | 55.0% | |
GCCCTTCCTGGTGACAATGT+GGG | - | chr1.2:72747288-72747307 | MS.gene54763:intron | 55.0% | |
GCGTCAAACTGTGGCTGTTG+GGG | - | chr1.2:72747671-72747690 | MS.gene54763:CDS | 55.0% | |
GGCTTGTCTGAAGGCCTCTT+AGG | + | chr1.2:72747099-72747118 | None:intergenic | 55.0% | |
GGTCTGCTTAAGTCCTCCAC+TGG | + | chr1.2:72747724-72747743 | None:intergenic | 55.0% | |
GTGGAGAAGAAGGATCCCAG+TGG | - | chr1.2:72747705-72747724 | MS.gene54763:CDS | 55.0% | |
TCAAGGGCCTCAAGAAGGGT+TGG | + | chr1.2:72747063-72747082 | None:intergenic | 55.0% | |
TCCTGAAGTGGTAGTCGGAG+GGG | + | chr1.2:72747120-72747139 | None:intergenic | 55.0% | |
TGACAGCAATGTGGGAGGTG+TGG | + | chr1.2:72747476-72747495 | None:intergenic | 55.0% | |
TGCACTGTCATTGATGCCCC+CGG | - | chr1.2:72746551-72746570 | MS.gene54763:CDS | 55.0% | |
TGTGGCTGTTGGGGTCATCA+AGG | - | chr1.2:72747680-72747699 | MS.gene54763:CDS | 55.0% | |
TGTTGGGGTCATCAAGGCTG+TGG | - | chr1.2:72747686-72747705 | MS.gene54763:CDS | 55.0% | |
TTCCTTGGCTGGGTCATCCT+TGG | + | chr1.2:72747373-72747392 | None:intergenic | 55.0% | |
! | TCAACCACCATGGGCTTGGT+GGG | + | chr1.2:72747603-72747622 | None:intergenic | 55.0% |
!! | GTCATTGGCCATGTCGACTC+TGG | - | chr1.2:72746326-72746345 | MS.gene54763:CDS | 55.0% |
ACAGCAAAACGGCCGAGTGG+AGG | + | chr1.2:72747642-72747661 | None:intergenic | 60.0% | |
AGTCGGAGGGGCTTGTCTGA+AGG | + | chr1.2:72747108-72747127 | None:intergenic | 60.0% | |
CATTGATGCCCCCGGACACA+GGG | - | chr1.2:72746559-72746578 | MS.gene54763:CDS | 60.0% | |
CTCAACCACCATGGGCTTGG+TGG | + | chr1.2:72747604-72747623 | None:intergenic | 60.0% | |
CTCCAAGGATGACCCAGCCA+AGG | - | chr1.2:72747368-72747387 | MS.gene54763:CDS | 60.0% | |
GATTCCCACCAAGCCCATGG+TGG | - | chr1.2:72747596-72747615 | MS.gene54763:CDS | 60.0% | |
GGCCCTTCCTGGTGACAATG+TGG | - | chr1.2:72747287-72747306 | MS.gene54763:intron | 60.0% | |
TCATTGATGCCCCCGGACAC+AGG | - | chr1.2:72746558-72746577 | MS.gene54763:CDS | 60.0% | |
GCCCCTCCGACTACCACTTC+AGG | - | chr1.2:72747116-72747135 | MS.gene54763:CDS | 65.0% | |
GCTCTCACAGAGGCCCTTCC+TGG | - | chr1.2:72747276-72747295 | MS.gene54763:intron | 65.0% | |
CCAGTCTCGACACGCCCCAC+AGG | + | chr1.2:72747174-72747193 | None:intergenic | 70.0% | |
CCTGTGGGGCGTGTCGAGAC+TGG | - | chr1.2:72747171-72747190 | MS.gene54763:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 72746293 | 72747767 | 72746293 | ID=MS.gene54763 |
chr1.2 | mRNA | 72746293 | 72747767 | 72746293 | ID=MS.gene54763.t1;Parent=MS.gene54763 |
chr1.2 | exon | 72747306 | 72747767 | 72747306 | ID=MS.gene54763.t1.exon1;Parent=MS.gene54763.t1 |
chr1.2 | CDS | 72747306 | 72747767 | 72747306 | ID=cds.MS.gene54763.t1;Parent=MS.gene54763.t1 |
chr1.2 | exon | 72746293 | 72747177 | 72746293 | ID=MS.gene54763.t1.exon2;Parent=MS.gene54763.t1 |
chr1.2 | CDS | 72746293 | 72747177 | 72746293 | ID=cds.MS.gene54763.t1;Parent=MS.gene54763.t1 |
Gene Sequence |
Protein sequence |