Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001097.t1 | XP_003618775.2 | 100 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 1.70E-258 | 901.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001097.t1 | O64937 | 96.9 | 447 | 14 | 0 | 1 | 447 | 1 | 447 | 1.2e-255 | 883.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001097.t1 | G7KN61 | 100.0 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 1.2e-258 | 901.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001097.t1 | MTR_6g021800 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
MS.gene001097.t1 | MTR_6g021805 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
MS.gene001097.t1 | MTR_1g495705 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
MS.gene001097.t1 | MTR_1g095650 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
MS.gene001097.t1 | MTR_1g095703 | 96.429 | 448 | 15 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
MS.gene001097.t1 | MTR_4g014810 | 95.302 | 447 | 21 | 0 | 1 | 447 | 1 | 447 | 0.0 | 891 |
MS.gene001097.t1 | MTR_1g013680 | 95.227 | 440 | 18 | 1 | 1 | 437 | 1 | 440 | 0.0 | 865 |
MS.gene001097.t1 | MTR_1g085410 | 81.336 | 434 | 81 | 0 | 1 | 434 | 1 | 434 | 0.0 | 739 |
MS.gene001097.t1 | MTR_1g101870 | 80.182 | 439 | 82 | 3 | 1 | 439 | 1 | 434 | 0.0 | 726 |
MS.gene001097.t1 | MTR_1g101870 | 80.182 | 439 | 82 | 3 | 1 | 439 | 1 | 434 | 0.0 | 724 |
MS.gene001097.t1 | MTR_1g024175 | 78.802 | 434 | 92 | 0 | 1 | 434 | 1 | 434 | 0.0 | 724 |
MS.gene001097.t1 | MTR_8g014590 | 77.951 | 449 | 96 | 2 | 1 | 446 | 1 | 449 | 0.0 | 713 |
MS.gene001097.t1 | MTR_1g095650 | 95.965 | 347 | 13 | 1 | 102 | 447 | 1 | 347 | 0.0 | 688 |
MS.gene001097.t1 | MTR_2g082730 | 70.682 | 440 | 112 | 2 | 1 | 438 | 1 | 425 | 0.0 | 639 |
MS.gene001097.t1 | MTR_5g037350 | 66.383 | 470 | 121 | 1 | 3 | 435 | 13 | 482 | 0.0 | 629 |
MS.gene001097.t1 | MTR_1g089520 | 69.406 | 438 | 116 | 3 | 4 | 440 | 5 | 425 | 0.0 | 623 |
MS.gene001097.t1 | MTR_2g082665 | 65.682 | 440 | 108 | 2 | 1 | 438 | 1 | 399 | 0.0 | 581 |
MS.gene001097.t1 | MTR_2g037420 | 63.053 | 452 | 121 | 4 | 1 | 447 | 1 | 411 | 0.0 | 558 |
MS.gene001097.t1 | MTR_2g080210 | 64.368 | 435 | 119 | 4 | 1 | 432 | 1 | 402 | 0.0 | 549 |
MS.gene001097.t1 | MTR_8g013910 | 63.029 | 449 | 131 | 5 | 1 | 433 | 1 | 430 | 0.0 | 546 |
MS.gene001097.t1 | MTR_8g008740 | 78.154 | 325 | 70 | 1 | 1 | 324 | 1 | 325 | 0.0 | 538 |
MS.gene001097.t1 | MTR_1g112460 | 64.094 | 298 | 65 | 4 | 155 | 446 | 1 | 262 | 3.93e-124 | 362 |
MS.gene001097.t1 | MTR_1g495735 | 74.129 | 201 | 42 | 1 | 240 | 430 | 106 | 306 | 3.35e-99 | 299 |
MS.gene001097.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 4.80e-17 | 82.0 |
MS.gene001097.t1 | MTR_6g080420 | 37.731 | 432 | 255 | 6 | 5 | 428 | 89 | 514 | 1.21e-96 | 300 |
MS.gene001097.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 49 | 476 | 1.45e-93 | 291 |
MS.gene001097.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 43 | 470 | 2.18e-93 | 290 |
MS.gene001097.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 70 | 497 | 4.03e-93 | 290 |
MS.gene001097.t1 | MTR_8g087950 | 35.566 | 433 | 270 | 6 | 7 | 433 | 275 | 704 | 2.05e-90 | 289 |
MS.gene001097.t1 | MTR_8g087950 | 35.566 | 433 | 270 | 6 | 7 | 433 | 348 | 777 | 1.09e-89 | 289 |
MS.gene001097.t1 | MTR_1g101880 | 86.364 | 154 | 21 | 0 | 1 | 154 | 1 | 154 | 1.19e-89 | 273 |
MS.gene001097.t1 | MTR_4g054970 | 55.372 | 242 | 79 | 4 | 193 | 431 | 50 | 265 | 2.03e-79 | 248 |
MS.gene001097.t1 | MTR_4g054970 | 77.273 | 44 | 10 | 0 | 1 | 44 | 1 | 44 | 4.58e-13 | 69.7 |
MS.gene001097.t1 | MTR_1g024165 | 81.884 | 138 | 25 | 0 | 8 | 145 | 12 | 149 | 1.95e-78 | 240 |
MS.gene001097.t1 | MTR_8g014950 | 75.490 | 102 | 25 | 0 | 3 | 104 | 4 | 105 | 2.57e-47 | 158 |
MS.gene001097.t1 | MTR_7g094460 | 30.227 | 440 | 243 | 14 | 3 | 429 | 59 | 447 | 1.67e-45 | 164 |
MS.gene001097.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 1.17e-42 | 149 |
MS.gene001097.t1 | MTR_3g076660 | 30.631 | 444 | 247 | 15 | 3 | 429 | 88 | 487 | 5.23e-42 | 155 |
MS.gene001097.t1 | MTR_2g021300 | 29.385 | 439 | 248 | 12 | 3 | 429 | 46 | 434 | 1.09e-41 | 153 |
MS.gene001097.t1 | MTR_8g014960 | 62.195 | 82 | 31 | 0 | 213 | 294 | 2 | 83 | 2.88e-27 | 107 |
MS.gene001097.t1 | MTR_3g097250 | 26.103 | 272 | 144 | 9 | 9 | 272 | 85 | 307 | 2.92e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001097.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene001097.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene001097.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene001097.t1 | AT1G07920 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene001097.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene001097.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene001097.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene001097.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene001097.t1 | AT1G07930 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
MS.gene001097.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
MS.gene001097.t1 | AT1G07930 | 90.517 | 116 | 11 | 0 | 331 | 446 | 254 | 369 | 1.79e-68 | 223 |
MS.gene001097.t1 | AT1G18070 | 37.412 | 425 | 258 | 5 | 5 | 424 | 99 | 520 | 6.59e-94 | 293 |
MS.gene001097.t1 | AT1G18070 | 37.412 | 425 | 258 | 5 | 5 | 424 | 99 | 520 | 6.59e-94 | 293 |
MS.gene001097.t1 | AT1G18070 | 36.697 | 436 | 257 | 6 | 5 | 424 | 99 | 531 | 1.04e-90 | 285 |
MS.gene001097.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 1.84e-90 | 288 |
MS.gene001097.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.88e-90 | 288 |
MS.gene001097.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.88e-90 | 288 |
MS.gene001097.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 9.81e-90 | 288 |
MS.gene001097.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 1.10e-89 | 288 |
MS.gene001097.t1 | AT1G35550 | 77.885 | 104 | 23 | 0 | 335 | 438 | 1 | 104 | 5.60e-54 | 176 |
MS.gene001097.t1 | AT4G20360 | 30.594 | 438 | 255 | 10 | 3 | 429 | 75 | 474 | 1.27e-44 | 162 |
MS.gene001097.t1 | AT4G20360 | 30.594 | 438 | 255 | 10 | 3 | 429 | 75 | 474 | 1.27e-44 | 162 |
MS.gene001097.t1 | AT4G02930 | 29.977 | 437 | 249 | 13 | 3 | 429 | 63 | 452 | 2.02e-44 | 161 |
MS.gene001097.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 1.60e-12 | 70.1 |
MS.gene001097.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 2.25e-11 | 66.6 |
MS.gene001097.t1 | AT5G08650 | 27.037 | 270 | 144 | 10 | 9 | 272 | 88 | 310 | 2.46e-11 | 66.2 |
MS.gene001097.t1 | AT5G08650 | 27.037 | 270 | 144 | 10 | 9 | 272 | 88 | 310 | 2.73e-11 | 66.2 |
Find 135 sgRNAs with CRISPR-Local
Find 145 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCGGTATGGTTGTGACTTT+TGG | 0.190241 | 6.2:+15168365 | MS.gene001097:CDS |
GGGCTTGTCTGTGGGTCTCT+TGG | 0.228126 | 6.2:-15168258 | None:intergenic |
CTTCTTCTTGGCAGCAGCTT+TGG | 0.247525 | 6.2:-15168900 | None:intergenic |
GGCTTGTCTGTGGGTCTCTT+GGG | 0.275199 | 6.2:-15168257 | None:intergenic |
TTCATTAAGAACATGATTAC+TGG | 0.308905 | 6.2:+15167777 | MS.gene001097:CDS |
GGTGGGAGATCACTTCTTCT+TGG | 0.325386 | 6.2:-15168912 | None:intergenic |
GCTCTCACTGAAGCTCTTCC+AGG | 0.343392 | 6.2:+15168437 | MS.gene001097:CDS |
TTGCAAGATGTTTACAAGAT+TGG | 0.346171 | 6.2:+15168293 | MS.gene001097:CDS |
GTCTCTTGGGCTCGTTGATC+TGG | 0.347889 | 6.2:-15168244 | None:intergenic |
CATATCAACATTGTCGTCAT+TGG | 0.354281 | 6.2:+15167504 | MS.gene001097:CDS |
ATCACCATTCTTCAAGAACT+TGG | 0.354818 | 6.2:-15168717 | None:intergenic |
ACCTAGCCTTTGAGTACTTA+GGG | 0.356571 | 6.2:-15168058 | None:intergenic |
GTTTACAAGATTGGTGGTAT+TGG | 0.363154 | 6.2:+15168302 | MS.gene001097:CDS |
ATCCCATTCGTTCCAATCTC+TGG | 0.368437 | 6.2:+15168143 | MS.gene001097:CDS |
GGCAGCAGCTTTGGTGACTT+TGG | 0.372842 | 6.2:-15168891 | None:intergenic |
AAGTTGGCAGCTTCCTTGGC+AGG | 0.382611 | 6.2:-15168542 | None:intergenic |
AGTGAAGTTGGCAGCTTCCT+TGG | 0.410082 | 6.2:-15168546 | None:intergenic |
ACCAGATCGCCTGTCAATCT+TGG | 0.419719 | 6.2:-15168675 | None:intergenic |
TTCCTTGGCAGGGTCATCCT+TGG | 0.427055 | 6.2:-15168531 | None:intergenic |
ATGGGTTCTTGACAAGCTTA+AGG | 0.430277 | 6.2:+15167656 | MS.gene001097:CDS |
AAGCCTGAGGGGCTTGTCTG+TGG | 0.432212 | 6.2:-15168267 | None:intergenic |
TCACCTTCAAAACCAGAGAT+TGG | 0.432839 | 6.2:-15168155 | None:intergenic |
TCTGGAAAATCAACAACAAC+TGG | 0.436226 | 6.2:+15167537 | MS.gene001097:CDS |
AGCCTGAGGGGCTTGTCTGT+GGG | 0.440652 | 6.2:-15168266 | None:intergenic |
CTCGACCACCATGGGCTTGG+TGG | 0.447012 | 6.2:-15168762 | None:intergenic |
GGCAGGGTCATCCTTGGAGT+TGG | 0.452433 | 6.2:-15168525 | None:intergenic |
ATGAACCACCCTGGTCAGAT+TGG | 0.454810 | 6.2:+15168584 | MS.gene001097:CDS |
CTTATCATTGACTCCACCAC+TGG | 0.461752 | 6.2:+15167825 | MS.gene001097:CDS |
TTTGGTGACTTTGGCTCCAG+TGG | 0.473646 | 6.2:-15168882 | None:intergenic |
ACCAAGATTGACAGGCGATC+TGG | 0.474566 | 6.2:+15168674 | MS.gene001097:CDS |
CAAGATGTTTACAAGATTGG+TGG | 0.475647 | 6.2:+15168296 | MS.gene001097:CDS |
TAAGAACAGCACAATCAGCC+TGG | 0.478298 | 6.2:-15167806 | None:intergenic |
GGTCTCGACCACCATGGGCT+TGG | 0.479606 | 6.2:-15168765 | None:intergenic |
AGTTTCTTCCTACTTGAAGA+AGG | 0.482389 | 6.2:+15168100 | MS.gene001097:CDS |
TACCTAGCCTTTGAGTACTT+AGG | 0.484966 | 6.2:-15168059 | None:intergenic |
GTCATTGGACATGTCGACTC+TGG | 0.490675 | 6.2:+15167519 | MS.gene001097:CDS |
TCCAAAAGTCACAACCATAC+CGG | 0.497778 | 6.2:-15168366 | None:intergenic |
CTTAAGGCTGAGCGTGAAAG+AGG | 0.501131 | 6.2:+15167672 | MS.gene001097:CDS |
CATCAAGGCTGTGGAGAAGA+AGG | 0.501366 | 6.2:+15168856 | MS.gene001097:CDS |
CACCAACCTTGACTGGTACA+AGG | 0.502465 | 6.2:+15168196 | MS.gene001097:CDS |
TCTTCCTACTTGAAGAAGGT+TGG | 0.503467 | 6.2:+15168104 | MS.gene001097:CDS |
TCGACCACCATGGGCTTGGT+GGG | 0.509916 | 6.2:-15168761 | None:intergenic |
AACTTGTTACCAAGATTGAC+AGG | 0.511236 | 6.2:+15168666 | MS.gene001097:CDS |
CACCCTGGTCAGATTGGAAA+CGG | 0.512174 | 6.2:+15168590 | MS.gene001097:CDS |
GACCCACAGACAAGCCCCTC+AGG | 0.515484 | 6.2:+15168264 | MS.gene001097:CDS |
GATTGACAGGCGATCTGGTA+AGG | 0.518046 | 6.2:+15168679 | MS.gene001097:CDS |
CTTGTACCAGTCAAGGTTGG+TGG | 0.518944 | 6.2:-15168195 | None:intergenic |
TTGGTGACTTTGGCTCCAGT+GGG | 0.520107 | 6.2:-15168881 | None:intergenic |
ATCATTGACTCCACCACTGG+TGG | 0.521304 | 6.2:+15167828 | MS.gene001097:CDS |
AAACCAGAGATTGGAACGAA+TGG | 0.521400 | 6.2:-15168146 | None:intergenic |
AACCAGAGATTGGAACGAAT+GGG | 0.522921 | 6.2:-15168145 | None:intergenic |
AGAGGTCCACCAACCTTGAC+TGG | 0.523105 | 6.2:+15168189 | MS.gene001097:CDS |
CCGGTCTCAACACGTCCGAC+TGG | 0.523632 | 6.2:-15168332 | None:intergenic |
TTGAATCCGACATTGTCTCC+TGG | 0.526013 | 6.2:-15168455 | None:intergenic |
TTAATGAAATCACGATGTCC+TGG | 0.532533 | 6.2:-15167762 | None:intergenic |
GAGCCCAAGTTCTTGAAGAA+TGG | 0.532631 | 6.2:+15168713 | MS.gene001097:CDS |
AGCGTTCATTCAAGTACGCA+TGG | 0.534658 | 6.2:+15167637 | MS.gene001097:CDS |
TGCACAGTCATTGATGCTCC+AGG | 0.539947 | 6.2:+15167744 | MS.gene001097:CDS |
TCACCATTCTTCAAGAACTT+GGG | 0.540637 | 6.2:-15168716 | None:intergenic |
CCAAAAGTCACAACCATACC+GGG | 0.540748 | 6.2:-15168365 | None:intergenic |
GATGACTTGGGAAGTGAAGT+TGG | 0.546093 | 6.2:-15168558 | None:intergenic |
TCCCTTGTACCAGTCAAGGT+TGG | 0.546130 | 6.2:-15168198 | None:intergenic |
AAGCGAGAAGAGCGTGCTCA+CGG | 0.547764 | 6.2:-15167884 | None:intergenic |
TATCCGTTTCCAATCTGACC+AGG | 0.548901 | 6.2:-15168593 | None:intergenic |
GCAAAGGTCTCGACCACCAT+GGG | 0.551044 | 6.2:-15168770 | None:intergenic |
CGGTATTGTGAAGCCCGGTA+TGG | 0.551104 | 6.2:+15168352 | MS.gene001097:CDS |
GTAACCAACCTTCTTCAAGT+AGG | 0.553863 | 6.2:-15168108 | None:intergenic |
TTCTTGAAGAATGGTGATGC+TGG | 0.554703 | 6.2:+15168722 | MS.gene001097:CDS |
ATCTTGCAATGGAAGCCTGA+GGG | 0.556985 | 6.2:-15168279 | None:intergenic |
TGTTGCTGTTGGTGTCATCA+AGG | 0.557300 | 6.2:+15168841 | MS.gene001097:CDS |
CATACCGGGCTTCACAATAC+CGG | 0.558131 | 6.2:-15168351 | None:intergenic |
ACCAACCTTGACTGGTACAA+GGG | 0.559612 | 6.2:+15168197 | MS.gene001097:CDS |
AGTTGGCAGCTTCCTTGGCA+GGG | 0.564600 | 6.2:-15168541 | None:intergenic |
GGTGGTTCATGATGATGACT+TGG | 0.569890 | 6.2:-15168571 | None:intergenic |
AGCTTCAAAACCACCAGTGG+TGG | 0.571917 | 6.2:-15167838 | None:intergenic |
TTGGTCCCTTGTACCAGTCA+AGG | 0.575920 | 6.2:-15168202 | None:intergenic |
AGCGAGAAGAGCGTGCTCAC+GGG | 0.577686 | 6.2:-15167883 | None:intergenic |
GACTGTGCAGTAGTACTTGG+TGG | 0.578462 | 6.2:-15167730 | None:intergenic |
CCAGTCGGACGTGTTGAGAC+CGG | 0.578770 | 6.2:+15168332 | MS.gene001097:CDS |
TGTTAAGAATGTTGCTGTGA+AGG | 0.579878 | 6.2:+15168478 | MS.gene001097:CDS |
CATGATTACTGGAACCTCCC+AGG | 0.581850 | 6.2:+15167788 | MS.gene001097:CDS |
AACTTCAGTTGTCAAACCAG+TGG | 0.589445 | 6.2:-15168390 | None:intergenic |
AATGACTGTGCAGTAGTACT+TGG | 0.591989 | 6.2:-15167733 | None:intergenic |
TCAAGAGCCTCGAGGAGAGT+TGG | 0.592023 | 6.2:-15168221 | None:intergenic |
GAAGCTGGTATCTCTAAGGA+TGG | 0.592030 | 6.2:+15167855 | MS.gene001097:CDS |
ATCTTGTAAACATCTTGCAA+TGG | 0.592677 | 6.2:-15168290 | None:intergenic |
TTTGCTGAATATCCTCCACT+TGG | 0.598309 | 6.2:+15168788 | MS.gene001097:CDS |
GTGGAGAAGAAGGATCCCAC+TGG | 0.600566 | 6.2:+15168866 | MS.gene001097:CDS |
GGTCACTTGATCTACAAGCT+AGG | 0.604596 | 6.2:+15167558 | MS.gene001097:CDS |
AAGAACAGCACAATCAGCCT+GGG | 0.607202 | 6.2:-15167805 | None:intergenic |
TGTTGGTGTCATCAAGGCTG+TGG | 0.608422 | 6.2:+15168847 | MS.gene001097:CDS |
GATGGTTCCCACCAAGCCCA+TGG | 0.611182 | 6.2:+15168754 | MS.gene001097:CDS |
TTTCCACAAGGCAATATCGA+TGG | 0.613258 | 6.2:-15167700 | None:intergenic |
GCGTTCATTCAAGTACGCAT+GGG | 0.615188 | 6.2:+15167638 | MS.gene001097:CDS |
ACTTCAGTTGTCAAACCAGT+GGG | 0.615673 | 6.2:-15168389 | None:intergenic |
CTCCAAGGATGACCCTGCCA+AGG | 0.619064 | 6.2:+15168529 | MS.gene001097:CDS |
TTTCGTTGCATCCAACTCCA+AGG | 0.619372 | 6.2:+15168514 | MS.gene001097:CDS |
ATGCGTCAAACTGTTGCTGT+TGG | 0.619748 | 6.2:+15168830 | MS.gene001097:CDS |
AAGGTGACAACATGATTGAG+AGG | 0.624581 | 6.2:+15168171 | MS.gene001097:CDS |
GAGACCGGTATTGTGAAGCC+CGG | 0.625104 | 6.2:+15168347 | MS.gene001097:CDS |
TCTTGCAATGGAAGCCTGAG+GGG | 0.631058 | 6.2:-15168278 | None:intergenic |
ATCTGGTAAGGAGATTGAGA+AGG | 0.634092 | 6.2:+15168691 | MS.gene001097:CDS |
GATGATCTGTTGTTGTAACA+AGG | 0.635291 | 6.2:+15167926 | MS.gene001097:CDS |
AGCCTTTGAGTACTTAGGGG+TGG | 0.635633 | 6.2:-15168054 | None:intergenic |
TGATGCTGGTATCATTAAGA+TGG | 0.636151 | 6.2:+15168736 | MS.gene001097:CDS |
TGTGATCGAGAGATTCGAGA+AGG | 0.638590 | 6.2:+15167596 | MS.gene001097:CDS |
AGCAAAGGTCTCGACCACCA+TGG | 0.644138 | 6.2:-15168771 | None:intergenic |
CCTAGCCTTTGAGTACTTAG+GGG | 0.644234 | 6.2:-15168057 | None:intergenic |
CACTTGATCTACAAGCTAGG+AGG | 0.645428 | 6.2:+15167561 | MS.gene001097:CDS |
GAGGTGTGGCAATCAAGCAC+TGG | 0.646700 | 6.2:-15168620 | None:intergenic |
TTACCATCGATATTGCCTTG+TGG | 0.647445 | 6.2:+15167697 | MS.gene001097:CDS |
GTCATCATCATGAACCACCC+TGG | 0.650188 | 6.2:+15168575 | MS.gene001097:CDS |
GCTCTTCCAGGAGACAATGT+CGG | 0.651488 | 6.2:+15168449 | MS.gene001097:CDS |
AAACTTCACAGCAATGTGAG+AGG | 0.653594 | 6.2:-15168639 | None:intergenic |
AACAGCACAATCAGCCTGGG+AGG | 0.653730 | 6.2:-15167802 | None:intergenic |
CATCTTGCAATGGAAGCCTG+AGG | 0.654491 | 6.2:-15168280 | None:intergenic |
TACCACCCCTAAGTACTCAA+AGG | 0.654719 | 6.2:+15168052 | MS.gene001097:CDS |
ACAGCAAAACGTCCAAGTGG+AGG | 0.656142 | 6.2:-15168800 | None:intergenic |
CCCCTAAGTACTCAAAGGCT+AGG | 0.656218 | 6.2:+15168057 | MS.gene001097:CDS |
TAGGTACGACGAAATCGTGA+AGG | 0.667883 | 6.2:+15168076 | MS.gene001097:CDS |
ACCAGCTTCAAAACCACCAG+TGG | 0.669846 | 6.2:-15167841 | None:intergenic |
TCACAGCAATGTGAGAGGTG+TGG | 0.670228 | 6.2:-15168634 | None:intergenic |
AAGTGGAGGATATTCAGCAA+AGG | 0.671437 | 6.2:-15168786 | None:intergenic |
CGTTTCCAATCTGACCAGGG+TGG | 0.687081 | 6.2:-15168589 | None:intergenic |
ATCCGTTTCCAATCTGACCA+GGG | 0.688739 | 6.2:-15168592 | None:intergenic |
CTGACAGCAAAACGTCCAAG+TGG | 0.689307 | 6.2:-15168803 | None:intergenic |
GTGGTTCATGATGATGACTT+GGG | 0.690284 | 6.2:-15168570 | None:intergenic |
GGTATTGGAACTGTGCCAGT+CGG | 0.702004 | 6.2:+15168317 | MS.gene001097:CDS |
GTCTGTTGAGATGCACCACG+AGG | 0.705830 | 6.2:+15168415 | MS.gene001097:CDS |
GCTGTGAAGGATCTCAAGCG+TGG | 0.706441 | 6.2:+15168491 | MS.gene001097:CDS |
CAAGGGACCAACTCTCCTCG+AGG | 0.714910 | 6.2:+15168214 | MS.gene001097:CDS |
GGTGGTCTCGAATTTCCACA+AGG | 0.719757 | 6.2:-15167712 | None:intergenic |
GGTTCCCACCAAGCCCATGG+TGG | 0.721829 | 6.2:+15168757 | MS.gene001097:CDS |
TGATCTGGTCAAGAGCCTCG+AGG | 0.724586 | 6.2:-15168229 | None:intergenic |
GAGCTTCAGTGAGAGCCTCG+TGG | 0.728674 | 6.2:-15168430 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTCAATTTTTTGTTTCAGA+TGG | + | chr6.2:15168025-15168044 | MS.gene001097:intron | 20.0% |
! | TTCATTAAGAACATGATTAC+TGG | + | chr6.2:15167777-15167796 | MS.gene001097:CDS | 25.0% |
ATCTTGTAAACATCTTGCAA+TGG | - | chr6.2:15168293-15168312 | None:intergenic | 30.0% | |
TTGCAAGATGTTTACAAGAT+TGG | + | chr6.2:15168293-15168312 | MS.gene001097:CDS | 30.0% | |
AGTTTCTTCCTACTTGAAGA+AGG | + | chr6.2:15168100-15168119 | MS.gene001097:CDS | 35.0% | |
ATCACCATTCTTCAAGAACT+TGG | - | chr6.2:15168720-15168739 | None:intergenic | 35.0% | |
CAAGATGTTTACAAGATTGG+TGG | + | chr6.2:15168296-15168315 | MS.gene001097:CDS | 35.0% | |
CATATCAACATTGTCGTCAT+TGG | + | chr6.2:15167504-15167523 | MS.gene001097:CDS | 35.0% | |
GATGATCTGTTGTTGTAACA+AGG | + | chr6.2:15167926-15167945 | MS.gene001097:CDS | 35.0% | |
TCACCATTCTTCAAGAACTT+GGG | - | chr6.2:15168719-15168738 | None:intergenic | 35.0% | |
TCTGGAAAATCAACAACAAC+TGG | + | chr6.2:15167537-15167556 | MS.gene001097:CDS | 35.0% | |
TGAGTTACAGATTCTGACTT+TGG | + | chr6.2:15168002-15168021 | MS.gene001097:intron | 35.0% | |
TGATGCTGGTATCATTAAGA+TGG | + | chr6.2:15168736-15168755 | MS.gene001097:CDS | 35.0% | |
TGTTAAGAATGTTGCTGTGA+AGG | + | chr6.2:15168478-15168497 | MS.gene001097:CDS | 35.0% | |
TTAATGAAATCACGATGTCC+TGG | - | chr6.2:15167765-15167784 | None:intergenic | 35.0% | |
! | GTTTACAAGATTGGTGGTAT+TGG | + | chr6.2:15168302-15168321 | MS.gene001097:CDS | 35.0% |
!! | AACTTGTTACCAAGATTGAC+AGG | + | chr6.2:15168666-15168685 | MS.gene001097:CDS | 35.0% |
!!! | TTTTGAAGCTGGTATCTCTA+AGG | + | chr6.2:15167851-15167870 | MS.gene001097:CDS | 35.0% |
AAACCAGAGATTGGAACGAA+TGG | - | chr6.2:15168149-15168168 | None:intergenic | 40.0% | |
AAACTTCACAGCAATGTGAG+AGG | - | chr6.2:15168642-15168661 | None:intergenic | 40.0% | |
AACCAGAGATTGGAACGAAT+GGG | - | chr6.2:15168148-15168167 | None:intergenic | 40.0% | |
AACTTCAGTTGTCAAACCAG+TGG | - | chr6.2:15168393-15168412 | None:intergenic | 40.0% | |
AAGGTGACAACATGATTGAG+AGG | + | chr6.2:15168171-15168190 | MS.gene001097:CDS | 40.0% | |
AAGTGGAGGATATTCAGCAA+AGG | - | chr6.2:15168789-15168808 | None:intergenic | 40.0% | |
AATGACTGTGCAGTAGTACT+TGG | - | chr6.2:15167736-15167755 | None:intergenic | 40.0% | |
ACTTCAGTTGTCAAACCAGT+GGG | - | chr6.2:15168392-15168411 | None:intergenic | 40.0% | |
ATCTGGTAAGGAGATTGAGA+AGG | + | chr6.2:15168691-15168710 | MS.gene001097:CDS | 40.0% | |
ATGGGTTCTTGACAAGCTTA+AGG | + | chr6.2:15167656-15167675 | MS.gene001097:CDS | 40.0% | |
GTAACCAACCTTCTTCAAGT+AGG | - | chr6.2:15168111-15168130 | None:intergenic | 40.0% | |
TCACCTTCAAAACCAGAGAT+TGG | - | chr6.2:15168158-15168177 | None:intergenic | 40.0% | |
TCCAAAAGTCACAACCATAC+CGG | - | chr6.2:15168369-15168388 | None:intergenic | 40.0% | |
TCTTCCTACTTGAAGAAGGT+TGG | + | chr6.2:15168104-15168123 | MS.gene001097:CDS | 40.0% | |
TTACCATCGATATTGCCTTG+TGG | + | chr6.2:15167697-15167716 | MS.gene001097:CDS | 40.0% | |
TTTCCACAAGGCAATATCGA+TGG | - | chr6.2:15167703-15167722 | None:intergenic | 40.0% | |
TTTGCTGAATATCCTCCACT+TGG | + | chr6.2:15168788-15168807 | MS.gene001097:CDS | 40.0% | |
! | ACCTAGCCTTTGAGTACTTA+GGG | - | chr6.2:15168061-15168080 | None:intergenic | 40.0% |
! | GAACGAATGGGATTTTGTCT+GGG | - | chr6.2:15168136-15168155 | None:intergenic | 40.0% |
! | GTGGTTCATGATGATGACTT+GGG | - | chr6.2:15168573-15168592 | None:intergenic | 40.0% |
! | TACCTAGCCTTTGAGTACTT+AGG | - | chr6.2:15168062-15168081 | None:intergenic | 40.0% |
! | TTCTTGAAGAATGGTGATGC+TGG | + | chr6.2:15168722-15168741 | MS.gene001097:CDS | 40.0% |
!!! | GTTCCAATCTCTGGTTTTGA+AGG | + | chr6.2:15168152-15168171 | MS.gene001097:CDS | 40.0% |
AAGAACAGCACAATCAGCCT+GGG | - | chr6.2:15167808-15167827 | None:intergenic | 45.0% | |
ACCAACCTTGACTGGTACAA+GGG | + | chr6.2:15168197-15168216 | MS.gene001097:CDS | 45.0% | |
AGCGTTCATTCAAGTACGCA+TGG | + | chr6.2:15167637-15167656 | MS.gene001097:CDS | 45.0% | |
ATCCCATTCGTTCCAATCTC+TGG | + | chr6.2:15168143-15168162 | MS.gene001097:CDS | 45.0% | |
ATCCGTTTCCAATCTGACCA+GGG | - | chr6.2:15168595-15168614 | None:intergenic | 45.0% | |
ATCTTGCAATGGAAGCCTGA+GGG | - | chr6.2:15168282-15168301 | None:intergenic | 45.0% | |
ATGCGTCAAACTGTTGCTGT+TGG | + | chr6.2:15168830-15168849 | MS.gene001097:CDS | 45.0% | |
CACTTGATCTACAAGCTAGG+AGG | + | chr6.2:15167561-15167580 | MS.gene001097:CDS | 45.0% | |
CCAAAAGTCACAACCATACC+GGG | - | chr6.2:15168368-15168387 | None:intergenic | 45.0% | |
GAGCCCAAGTTCTTGAAGAA+TGG | + | chr6.2:15168713-15168732 | MS.gene001097:CDS | 45.0% | |
GCGTTCATTCAAGTACGCAT+GGG | + | chr6.2:15167638-15167657 | MS.gene001097:CDS | 45.0% | |
GGTCACTTGATCTACAAGCT+AGG | + | chr6.2:15167558-15167577 | MS.gene001097:CDS | 45.0% | |
TAAGAACAGCACAATCAGCC+TGG | - | chr6.2:15167809-15167828 | None:intergenic | 45.0% | |
TACCACCCCTAAGTACTCAA+AGG | + | chr6.2:15168052-15168071 | MS.gene001097:CDS | 45.0% | |
TAGGTACGACGAAATCGTGA+AGG | + | chr6.2:15168076-15168095 | MS.gene001097:CDS | 45.0% | |
TATCCGTTTCCAATCTGACC+AGG | - | chr6.2:15168596-15168615 | None:intergenic | 45.0% | |
TGTGATCGAGAGATTCGAGA+AGG | + | chr6.2:15167596-15167615 | MS.gene001097:CDS | 45.0% | |
TTGAATCCGACATTGTCTCC+TGG | - | chr6.2:15168458-15168477 | None:intergenic | 45.0% | |
TTTCGTTGCATCCAACTCCA+AGG | + | chr6.2:15168514-15168533 | MS.gene001097:CDS | 45.0% | |
! | CCTAGCCTTTGAGTACTTAG+GGG | - | chr6.2:15168060-15168079 | None:intergenic | 45.0% |
! | GAAGCTGGTATCTCTAAGGA+TGG | + | chr6.2:15167855-15167874 | MS.gene001097:CDS | 45.0% |
! | GATGACTTGGGAAGTGAAGT+TGG | - | chr6.2:15168561-15168580 | None:intergenic | 45.0% |
! | GGAACGAATGGGATTTTGTC+TGG | - | chr6.2:15168137-15168156 | None:intergenic | 45.0% |
! | GGTGGTTCATGATGATGACT+TGG | - | chr6.2:15168574-15168593 | None:intergenic | 45.0% |
!! | ACTTGGACGTTTTGCTGTCA+GGG | + | chr6.2:15168805-15168824 | MS.gene001097:CDS | 45.0% |
!! | CTTATCATTGACTCCACCAC+TGG | + | chr6.2:15167825-15167844 | MS.gene001097:CDS | 45.0% |
!! | GCTCTTCTCGCTTTTACTCT+TGG | + | chr6.2:15167894-15167913 | MS.gene001097:CDS | 45.0% |
!! | TGTTGCTGTTGGTGTCATCA+AGG | + | chr6.2:15168841-15168860 | MS.gene001097:CDS | 45.0% |
ACAGCAAAACGTCCAAGTGG+AGG | - | chr6.2:15168803-15168822 | None:intergenic | 50.0% | |
ACCAAGATTGACAGGCGATC+TGG | + | chr6.2:15168674-15168693 | MS.gene001097:CDS | 50.0% | |
ACCAGATCGCCTGTCAATCT+TGG | - | chr6.2:15168678-15168697 | None:intergenic | 50.0% | |
ACCAGCTTCAAAACCACCAG+TGG | - | chr6.2:15167844-15167863 | None:intergenic | 50.0% | |
AGCCTTTGAGTACTTAGGGG+TGG | - | chr6.2:15168057-15168076 | None:intergenic | 50.0% | |
AGCTTCAAAACCACCAGTGG+TGG | - | chr6.2:15167841-15167860 | None:intergenic | 50.0% | |
AGTGAAGTTGGCAGCTTCCT+TGG | - | chr6.2:15168549-15168568 | None:intergenic | 50.0% | |
ATGAACCACCCTGGTCAGAT+TGG | + | chr6.2:15168584-15168603 | MS.gene001097:CDS | 50.0% | |
CACCAACCTTGACTGGTACA+AGG | + | chr6.2:15168196-15168215 | MS.gene001097:CDS | 50.0% | |
CACCCTGGTCAGATTGGAAA+CGG | + | chr6.2:15168590-15168609 | MS.gene001097:CDS | 50.0% | |
CATACCGGGCTTCACAATAC+CGG | - | chr6.2:15168354-15168373 | None:intergenic | 50.0% | |
CATCAAGGCTGTGGAGAAGA+AGG | + | chr6.2:15168856-15168875 | MS.gene001097:CDS | 50.0% | |
CATCTTGCAATGGAAGCCTG+AGG | - | chr6.2:15168283-15168302 | None:intergenic | 50.0% | |
CATGATTACTGGAACCTCCC+AGG | + | chr6.2:15167788-15167807 | MS.gene001097:CDS | 50.0% | |
CCCCTAAGTACTCAAAGGCT+AGG | + | chr6.2:15168057-15168076 | MS.gene001097:CDS | 50.0% | |
CTGACAGCAAAACGTCCAAG+TGG | - | chr6.2:15168806-15168825 | None:intergenic | 50.0% | |
CTTAAGGCTGAGCGTGAAAG+AGG | + | chr6.2:15167672-15167691 | MS.gene001097:CDS | 50.0% | |
CTTCTTCTTGGCAGCAGCTT+TGG | - | chr6.2:15168903-15168922 | None:intergenic | 50.0% | |
CTTGTACCAGTCAAGGTTGG+TGG | - | chr6.2:15168198-15168217 | None:intergenic | 50.0% | |
GACTGTGCAGTAGTACTTGG+TGG | - | chr6.2:15167733-15167752 | None:intergenic | 50.0% | |
GATTGACAGGCGATCTGGTA+AGG | + | chr6.2:15168679-15168698 | MS.gene001097:CDS | 50.0% | |
GCTCTTCCAGGAGACAATGT+CGG | + | chr6.2:15168449-15168468 | MS.gene001097:CDS | 50.0% | |
GGTGGTCTCGAATTTCCACA+AGG | - | chr6.2:15167715-15167734 | None:intergenic | 50.0% | |
GTCATCATCATGAACCACCC+TGG | + | chr6.2:15168575-15168594 | MS.gene001097:CDS | 50.0% | |
TCACAGCAATGTGAGAGGTG+TGG | - | chr6.2:15168637-15168656 | None:intergenic | 50.0% | |
TCCCTTGTACCAGTCAAGGT+TGG | - | chr6.2:15168201-15168220 | None:intergenic | 50.0% | |
TCTTGCAATGGAAGCCTGAG+GGG | - | chr6.2:15168281-15168300 | None:intergenic | 50.0% | |
TGCACAGTCATTGATGCTCC+AGG | + | chr6.2:15167744-15167763 | MS.gene001097:CDS | 50.0% | |
TTGGTCCCTTGTACCAGTCA+AGG | - | chr6.2:15168205-15168224 | None:intergenic | 50.0% | |
! | CCCGGTATGGTTGTGACTTT+TGG | + | chr6.2:15168365-15168384 | MS.gene001097:CDS | 50.0% |
! | GGTATTGGAACTGTGCCAGT+CGG | + | chr6.2:15168317-15168336 | MS.gene001097:CDS | 50.0% |
! | GTTGTGACTTTTGGACCCAC+TGG | + | chr6.2:15168374-15168393 | MS.gene001097:CDS | 50.0% |
! | TTGGTGACTTTGGCTCCAGT+GGG | - | chr6.2:15168884-15168903 | None:intergenic | 50.0% |
! | TTTGGTGACTTTGGCTCCAG+TGG | - | chr6.2:15168885-15168904 | None:intergenic | 50.0% |
!! | ATCATTGACTCCACCACTGG+TGG | + | chr6.2:15167828-15167847 | MS.gene001097:CDS | 50.0% |
!! | CACTTGGACGTTTTGCTGTC+AGG | + | chr6.2:15168804-15168823 | MS.gene001097:CDS | 50.0% |
!! | GTCATTGGACATGTCGACTC+TGG | + | chr6.2:15167519-15167538 | MS.gene001097:CDS | 50.0% |
!! | TGTTGGTGTCATCAAGGCTG+TGG | + | chr6.2:15168847-15168866 | MS.gene001097:CDS | 50.0% |
!!! | ACCACTGGTGGTTTTGAAGC+TGG | + | chr6.2:15167840-15167859 | MS.gene001097:CDS | 50.0% |
AACAGCACAATCAGCCTGGG+AGG | - | chr6.2:15167805-15167824 | None:intergenic | 55.0% | |
AAGTTGGCAGCTTCCTTGGC+AGG | - | chr6.2:15168545-15168564 | None:intergenic | 55.0% | |
AGAGGTCCACCAACCTTGAC+TGG | + | chr6.2:15168189-15168208 | MS.gene001097:CDS | 55.0% | |
AGCAAAGGTCTCGACCACCA+TGG | - | chr6.2:15168774-15168793 | None:intergenic | 55.0% | |
AGTTGGCAGCTTCCTTGGCA+GGG | - | chr6.2:15168544-15168563 | None:intergenic | 55.0% | |
CGGTATTGTGAAGCCCGGTA+TGG | + | chr6.2:15168352-15168371 | MS.gene001097:CDS | 55.0% | |
CGTTTCCAATCTGACCAGGG+TGG | - | chr6.2:15168592-15168611 | None:intergenic | 55.0% | |
GAGACCGGTATTGTGAAGCC+CGG | + | chr6.2:15168347-15168366 | MS.gene001097:CDS | 55.0% | |
GAGGTGTGGCAATCAAGCAC+TGG | - | chr6.2:15168623-15168642 | None:intergenic | 55.0% | |
GCAAAGGTCTCGACCACCAT+GGG | - | chr6.2:15168773-15168792 | None:intergenic | 55.0% | |
GCTCTCACTGAAGCTCTTCC+AGG | + | chr6.2:15168437-15168456 | MS.gene001097:CDS | 55.0% | |
GCTGTGAAGGATCTCAAGCG+TGG | + | chr6.2:15168491-15168510 | MS.gene001097:CDS | 55.0% | |
GGCTTGTCTGTGGGTCTCTT+GGG | - | chr6.2:15168260-15168279 | None:intergenic | 55.0% | |
GTCTCTTGGGCTCGTTGATC+TGG | - | chr6.2:15168247-15168266 | None:intergenic | 55.0% | |
GTCTGTTGAGATGCACCACG+AGG | + | chr6.2:15168415-15168434 | MS.gene001097:CDS | 55.0% | |
GTGGAGAAGAAGGATCCCAC+TGG | + | chr6.2:15168866-15168885 | MS.gene001097:CDS | 55.0% | |
TCAAGAGCCTCGAGGAGAGT+TGG | - | chr6.2:15168224-15168243 | None:intergenic | 55.0% | |
TGATCTGGTCAAGAGCCTCG+AGG | - | chr6.2:15168232-15168251 | None:intergenic | 55.0% | |
TTCCTTGGCAGGGTCATCCT+TGG | - | chr6.2:15168534-15168553 | None:intergenic | 55.0% | |
! | AAGCGAGAAGAGCGTGCTCA+CGG | - | chr6.2:15167887-15167906 | None:intergenic | 55.0% |
! | GGCAGCAGCTTTGGTGACTT+TGG | - | chr6.2:15168894-15168913 | None:intergenic | 55.0% |
AAGCCTGAGGGGCTTGTCTG+TGG | - | chr6.2:15168270-15168289 | None:intergenic | 60.0% | |
AGCCTGAGGGGCTTGTCTGT+GGG | - | chr6.2:15168269-15168288 | None:intergenic | 60.0% | |
CAAGGGACCAACTCTCCTCG+AGG | + | chr6.2:15168214-15168233 | MS.gene001097:CDS | 60.0% | |
CCAGTCGGACGTGTTGAGAC+CGG | + | chr6.2:15168332-15168351 | MS.gene001097:CDS | 60.0% | |
CTCCAAGGATGACCCTGCCA+AGG | + | chr6.2:15168529-15168548 | MS.gene001097:CDS | 60.0% | |
GAGCTTCAGTGAGAGCCTCG+TGG | - | chr6.2:15168433-15168452 | None:intergenic | 60.0% | |
GATGGTTCCCACCAAGCCCA+TGG | + | chr6.2:15168754-15168773 | MS.gene001097:CDS | 60.0% | |
GGCAGGGTCATCCTTGGAGT+TGG | - | chr6.2:15168528-15168547 | None:intergenic | 60.0% | |
GGGCTTGTCTGTGGGTCTCT+TGG | - | chr6.2:15168261-15168280 | None:intergenic | 60.0% | |
! | AGCGAGAAGAGCGTGCTCAC+GGG | - | chr6.2:15167886-15167905 | None:intergenic | 60.0% |
! | TCGACCACCATGGGCTTGGT+GGG | - | chr6.2:15168764-15168783 | None:intergenic | 60.0% |
CCGGTCTCAACACGTCCGAC+TGG | - | chr6.2:15168335-15168354 | None:intergenic | 65.0% | |
CTCGACCACCATGGGCTTGG+TGG | - | chr6.2:15168765-15168784 | None:intergenic | 65.0% | |
GACCCACAGACAAGCCCCTC+AGG | + | chr6.2:15168264-15168283 | MS.gene001097:CDS | 65.0% | |
GGTCTCGACCACCATGGGCT+TGG | - | chr6.2:15168768-15168787 | None:intergenic | 65.0% | |
GGTTCCCACCAAGCCCATGG+TGG | + | chr6.2:15168757-15168776 | MS.gene001097:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 15167486 | 15168925 | 15167486 | ID=MS.gene001097 |
chr6.2 | mRNA | 15167486 | 15168925 | 15167486 | ID=MS.gene001097.t1;Parent=MS.gene001097 |
chr6.2 | exon | 15167486 | 15167947 | 15167486 | ID=MS.gene001097.t1.exon1;Parent=MS.gene001097.t1 |
chr6.2 | CDS | 15167486 | 15167947 | 15167486 | ID=cds.MS.gene001097.t1;Parent=MS.gene001097.t1 |
chr6.2 | exon | 15168044 | 15168925 | 15168044 | ID=MS.gene001097.t1.exon2;Parent=MS.gene001097.t1 |
chr6.2 | CDS | 15168044 | 15168925 | 15168044 | ID=cds.MS.gene001097.t1;Parent=MS.gene001097.t1 |
Gene Sequence |
Protein sequence |