Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074183.t1 | XP_003618775.2 | 100 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 1.70E-258 | 901.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074183.t1 | O64937 | 96.9 | 447 | 14 | 0 | 1 | 447 | 1 | 447 | 1.2e-255 | 883.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074183.t1 | G7KN61 | 100.0 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 1.2e-258 | 901.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074183.t1 | MTR_6g021800 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
| MS.gene074183.t1 | MTR_6g021805 | 100.000 | 447 | 0 | 0 | 1 | 447 | 1 | 447 | 0.0 | 918 |
| MS.gene074183.t1 | MTR_1g495705 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| MS.gene074183.t1 | MTR_1g095650 | 96.652 | 448 | 14 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| MS.gene074183.t1 | MTR_1g095703 | 96.429 | 448 | 15 | 1 | 1 | 447 | 1 | 448 | 0.0 | 895 |
| MS.gene074183.t1 | MTR_4g014810 | 95.302 | 447 | 21 | 0 | 1 | 447 | 1 | 447 | 0.0 | 891 |
| MS.gene074183.t1 | MTR_1g013680 | 95.227 | 440 | 18 | 1 | 1 | 437 | 1 | 440 | 0.0 | 865 |
| MS.gene074183.t1 | MTR_1g085410 | 81.336 | 434 | 81 | 0 | 1 | 434 | 1 | 434 | 0.0 | 739 |
| MS.gene074183.t1 | MTR_1g101870 | 80.182 | 439 | 82 | 3 | 1 | 439 | 1 | 434 | 0.0 | 726 |
| MS.gene074183.t1 | MTR_1g101870 | 80.182 | 439 | 82 | 3 | 1 | 439 | 1 | 434 | 0.0 | 724 |
| MS.gene074183.t1 | MTR_1g024175 | 78.802 | 434 | 92 | 0 | 1 | 434 | 1 | 434 | 0.0 | 724 |
| MS.gene074183.t1 | MTR_8g014590 | 77.951 | 449 | 96 | 2 | 1 | 446 | 1 | 449 | 0.0 | 713 |
| MS.gene074183.t1 | MTR_1g095650 | 95.965 | 347 | 13 | 1 | 102 | 447 | 1 | 347 | 0.0 | 688 |
| MS.gene074183.t1 | MTR_2g082730 | 70.682 | 440 | 112 | 2 | 1 | 438 | 1 | 425 | 0.0 | 639 |
| MS.gene074183.t1 | MTR_5g037350 | 66.383 | 470 | 121 | 1 | 3 | 435 | 13 | 482 | 0.0 | 629 |
| MS.gene074183.t1 | MTR_1g089520 | 69.406 | 438 | 116 | 3 | 4 | 440 | 5 | 425 | 0.0 | 623 |
| MS.gene074183.t1 | MTR_2g082665 | 65.682 | 440 | 108 | 2 | 1 | 438 | 1 | 399 | 0.0 | 581 |
| MS.gene074183.t1 | MTR_2g037420 | 63.053 | 452 | 121 | 4 | 1 | 447 | 1 | 411 | 0.0 | 558 |
| MS.gene074183.t1 | MTR_2g080210 | 64.368 | 435 | 119 | 4 | 1 | 432 | 1 | 402 | 0.0 | 549 |
| MS.gene074183.t1 | MTR_8g013910 | 63.029 | 449 | 131 | 5 | 1 | 433 | 1 | 430 | 0.0 | 546 |
| MS.gene074183.t1 | MTR_8g008740 | 78.154 | 325 | 70 | 1 | 1 | 324 | 1 | 325 | 0.0 | 538 |
| MS.gene074183.t1 | MTR_1g112460 | 64.094 | 298 | 65 | 4 | 155 | 446 | 1 | 262 | 3.93e-124 | 362 |
| MS.gene074183.t1 | MTR_1g495735 | 74.129 | 201 | 42 | 1 | 240 | 430 | 106 | 306 | 3.35e-99 | 299 |
| MS.gene074183.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 4.80e-17 | 82.0 |
| MS.gene074183.t1 | MTR_6g080420 | 37.731 | 432 | 255 | 6 | 5 | 428 | 89 | 514 | 1.21e-96 | 300 |
| MS.gene074183.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 49 | 476 | 1.45e-93 | 291 |
| MS.gene074183.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 43 | 470 | 2.18e-93 | 290 |
| MS.gene074183.t1 | MTR_8g106700 | 37.731 | 432 | 259 | 6 | 4 | 429 | 70 | 497 | 4.03e-93 | 290 |
| MS.gene074183.t1 | MTR_8g087950 | 35.566 | 433 | 270 | 6 | 7 | 433 | 275 | 704 | 2.05e-90 | 289 |
| MS.gene074183.t1 | MTR_8g087950 | 35.566 | 433 | 270 | 6 | 7 | 433 | 348 | 777 | 1.09e-89 | 289 |
| MS.gene074183.t1 | MTR_1g101880 | 86.364 | 154 | 21 | 0 | 1 | 154 | 1 | 154 | 1.19e-89 | 273 |
| MS.gene074183.t1 | MTR_4g054970 | 55.372 | 242 | 79 | 4 | 193 | 431 | 50 | 265 | 2.03e-79 | 248 |
| MS.gene074183.t1 | MTR_4g054970 | 77.273 | 44 | 10 | 0 | 1 | 44 | 1 | 44 | 4.58e-13 | 69.7 |
| MS.gene074183.t1 | MTR_1g024165 | 81.884 | 138 | 25 | 0 | 8 | 145 | 12 | 149 | 1.95e-78 | 240 |
| MS.gene074183.t1 | MTR_8g014950 | 75.490 | 102 | 25 | 0 | 3 | 104 | 4 | 105 | 2.57e-47 | 158 |
| MS.gene074183.t1 | MTR_7g094460 | 30.227 | 440 | 243 | 14 | 3 | 429 | 59 | 447 | 1.67e-45 | 164 |
| MS.gene074183.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 1.17e-42 | 149 |
| MS.gene074183.t1 | MTR_3g076660 | 30.631 | 444 | 247 | 15 | 3 | 429 | 88 | 487 | 5.23e-42 | 155 |
| MS.gene074183.t1 | MTR_2g021300 | 29.385 | 439 | 248 | 12 | 3 | 429 | 46 | 434 | 1.09e-41 | 153 |
| MS.gene074183.t1 | MTR_8g014960 | 62.195 | 82 | 31 | 0 | 213 | 294 | 2 | 83 | 2.88e-27 | 107 |
| MS.gene074183.t1 | MTR_3g097250 | 26.103 | 272 | 144 | 9 | 9 | 272 | 85 | 307 | 2.92e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074183.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074183.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074183.t1 | AT5G60390 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074183.t1 | AT1G07920 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074183.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074183.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074183.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074183.t1 | AT1G07940 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074183.t1 | AT1G07930 | 95.516 | 446 | 20 | 0 | 1 | 446 | 1 | 446 | 0.0 | 890 |
| MS.gene074183.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
| MS.gene074183.t1 | AT1G07930 | 90.517 | 116 | 11 | 0 | 331 | 446 | 254 | 369 | 1.79e-68 | 223 |
| MS.gene074183.t1 | AT1G18070 | 37.412 | 425 | 258 | 5 | 5 | 424 | 99 | 520 | 6.59e-94 | 293 |
| MS.gene074183.t1 | AT1G18070 | 37.412 | 425 | 258 | 5 | 5 | 424 | 99 | 520 | 6.59e-94 | 293 |
| MS.gene074183.t1 | AT1G18070 | 36.697 | 436 | 257 | 6 | 5 | 424 | 99 | 531 | 1.04e-90 | 285 |
| MS.gene074183.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 1.84e-90 | 288 |
| MS.gene074183.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.88e-90 | 288 |
| MS.gene074183.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.88e-90 | 288 |
| MS.gene074183.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 9.81e-90 | 288 |
| MS.gene074183.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 1.10e-89 | 288 |
| MS.gene074183.t1 | AT1G35550 | 77.885 | 104 | 23 | 0 | 335 | 438 | 1 | 104 | 5.60e-54 | 176 |
| MS.gene074183.t1 | AT4G20360 | 30.594 | 438 | 255 | 10 | 3 | 429 | 75 | 474 | 1.27e-44 | 162 |
| MS.gene074183.t1 | AT4G20360 | 30.594 | 438 | 255 | 10 | 3 | 429 | 75 | 474 | 1.27e-44 | 162 |
| MS.gene074183.t1 | AT4G02930 | 29.977 | 437 | 249 | 13 | 3 | 429 | 63 | 452 | 2.02e-44 | 161 |
| MS.gene074183.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 1.60e-12 | 70.1 |
| MS.gene074183.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 2.25e-11 | 66.6 |
| MS.gene074183.t1 | AT5G08650 | 27.037 | 270 | 144 | 10 | 9 | 272 | 88 | 310 | 2.46e-11 | 66.2 |
| MS.gene074183.t1 | AT5G08650 | 27.037 | 270 | 144 | 10 | 9 | 272 | 88 | 310 | 2.73e-11 | 66.2 |
Find 136 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCGGTATGGTTGTGACTTT+TGG | 0.190241 | 6.1:+5400824 | MS.gene074183:CDS |
| GGCTTGTCTGTGGGTCTCTT+TGG | 0.228629 | 6.1:-5400716 | None:intergenic |
| GTTGTGACATTACTTCTTCT+TGG | 0.266998 | 6.1:-5401371 | None:intergenic |
| GGCAGCAGCCTTTGTGACCT+TGG | 0.325868 | 6.1:-5401350 | None:intergenic |
| GCTCTCACTGAAGCTCTTCC+AGG | 0.343392 | 6.1:+5400896 | MS.gene074183:CDS |
| GTCTCTTTGGCTCGTTGATC+TGG | 0.343863 | 6.1:-5400703 | None:intergenic |
| TTGCAAGATGTTTACAAGAT+TGG | 0.346171 | 6.1:+5400752 | MS.gene074183:CDS |
| TTCATCAAGAACATGATTAC+TGG | 0.350652 | 6.1:+5400065 | MS.gene074183:CDS |
| CATATCAACATTGTCGTCAT+TGG | 0.354281 | 6.1:+5399792 | MS.gene074183:CDS |
| GTTTACAAGATTGGTGGTAT+TGG | 0.363154 | 6.1:+5400761 | MS.gene074183:CDS |
| AAGTTGGCAGCTTCCTTGGC+AGG | 0.382611 | 6.1:-5401001 | None:intergenic |
| GCTCTTCTTGCATTTACTCT+TGG | 0.389052 | 6.1:+5400182 | MS.gene074183:CDS |
| AGTGAAGTTGGCAGCTTCCT+TGG | 0.410082 | 6.1:-5401005 | None:intergenic |
| CATGTTGTCGCCTTCAAATC+CGG | 0.418140 | 6.1:-5400621 | None:intergenic |
| ACCTGGCCTTCGAGTACTTA+GGG | 0.418829 | 6.1:-5400517 | None:intergenic |
| ACCAGATCGCCTGTCAATCT+TGG | 0.419719 | 6.1:-5401134 | None:intergenic |
| GTTCCCATCTCCGGATTTGA+AGG | 0.422459 | 6.1:+5400611 | MS.gene074183:CDS |
| TTCCTTGGCAGGGTCATCCT+TGG | 0.427055 | 6.1:-5400990 | None:intergenic |
| ATTCCCTTTGTTCCCATCTC+CGG | 0.428420 | 6.1:+5400602 | MS.gene074183:CDS |
| AAGCCTGAGGGGCTTGTCTG+TGG | 0.432212 | 6.1:-5400726 | None:intergenic |
| TCTGGAAAATCAACAACAAC+TGG | 0.436226 | 6.1:+5399825 | MS.gene074183:CDS |
| AGCCTGAGGGGCTTGTCTGT+GGG | 0.440652 | 6.1:-5400725 | None:intergenic |
| ATGGGTTCTTGACAAACTTA+AGG | 0.442151 | 6.1:+5399944 | MS.gene074183:CDS |
| TATCCGTTTCCGATCTGTCC+AGG | 0.445786 | 6.1:-5401052 | None:intergenic |
| CCGGTCTCAACACGTCCAAC+TGG | 0.449484 | 6.1:-5400791 | None:intergenic |
| GGCAGGGTCATCCTTGGAGT+TGG | 0.452433 | 6.1:-5400984 | None:intergenic |
| GGTCTCAACCACCATGGGCT+TGG | 0.458699 | 6.1:-5401224 | None:intergenic |
| CTTATCATTGACTCCACCAC+TGG | 0.461752 | 6.1:+5400113 | MS.gene074183:CDS |
| CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 6.1:-5401221 | None:intergenic |
| ACCAAGATTGACAGGCGATC+TGG | 0.474566 | 6.1:+5401133 | MS.gene074183:CDS |
| CAAGATGTTTACAAGATTGG+TGG | 0.475647 | 6.1:+5400755 | MS.gene074183:CDS |
| TAAGAACAGCACAATCAGCC+TGG | 0.478298 | 6.1:-5400094 | None:intergenic |
| AGCCTTTGTGACCTTGGCTC+CGG | 0.480538 | 6.1:-5401344 | None:intergenic |
| CTTCACGATTTCATCGTACC+TGG | 0.484982 | 6.1:-5400534 | None:intergenic |
| CTTAAGGCTGAGCGTGAAAG+AGG | 0.490014 | 6.1:+5399960 | MS.gene074183:CDS |
| GTCATTGGACATGTCGACTC+TGG | 0.490675 | 6.1:+5399807 | MS.gene074183:CDS |
| CACCCTGGACAGATCGGAAA+CGG | 0.491987 | 6.1:+5401049 | MS.gene074183:CDS |
| GTCGCCTTCAAATCCGGAGA+TGG | 0.496717 | 6.1:-5400615 | None:intergenic |
| AGTTTCATCCTACTTGAAGA+AGG | 0.496964 | 6.1:+5400559 | MS.gene074183:CDS |
| TCCAAAAGTCACAACCATAC+CGG | 0.497778 | 6.1:-5400825 | None:intergenic |
| CATCAAGGCTGTGGAGAAGA+AGG | 0.501366 | 6.1:+5401315 | MS.gene074183:CDS |
| CACCAACCTTGACTGGTACA+AGG | 0.502465 | 6.1:+5400655 | MS.gene074183:CDS |
| TCATCCTACTTGAAGAAGGT+TGG | 0.505639 | 6.1:+5400563 | MS.gene074183:CDS |
| AACTTGTTACCAAGATTGAC+AGG | 0.511236 | 6.1:+5401125 | MS.gene074183:CDS |
| GACCCACAGACAAGCCCCTC+AGG | 0.515484 | 6.1:+5400723 | MS.gene074183:CDS |
| GAGCCTAAGTTCTTGAAGAA+TGG | 0.517492 | 6.1:+5401172 | MS.gene074183:CDS |
| GATTGACAGGCGATCTGGTA+AGG | 0.518046 | 6.1:+5401138 | MS.gene074183:CDS |
| CTTGTACCAGTCAAGGTTGG+TGG | 0.518944 | 6.1:-5400654 | None:intergenic |
| TACCTGGCCTTCGAGTACTT+AGG | 0.520657 | 6.1:-5400518 | None:intergenic |
| ATCATTGACTCCACCACTGG+TGG | 0.521304 | 6.1:+5400116 | MS.gene074183:CDS |
| AGAGGTCCACCAACCTTGAC+TGG | 0.523105 | 6.1:+5400648 | MS.gene074183:CDS |
| TCACCATTCTTCAAGAACTT+AGG | 0.524504 | 6.1:-5401175 | None:intergenic |
| TTGAATCCGACATTGTCTCC+TGG | 0.526013 | 6.1:-5400914 | None:intergenic |
| TCAACCACCATGGGCTTGGT+GGG | 0.529820 | 6.1:-5401220 | None:intergenic |
| AATCCGGAGATGGGAACAAA+GGG | 0.531601 | 6.1:-5400605 | None:intergenic |
| AGCGTTCATTCAAGTACGCA+TGG | 0.534658 | 6.1:+5399925 | MS.gene074183:CDS |
| CCAAAAGTCACAACCATACC+GGG | 0.540748 | 6.1:-5400824 | None:intergenic |
| GATGACTTGGGAAGTGAAGT+TGG | 0.546093 | 6.1:-5401017 | None:intergenic |
| TCCCTTGTACCAGTCAAGGT+TGG | 0.546130 | 6.1:-5400657 | None:intergenic |
| ATGCAAGAAGAGCGTGCTCA+CGG | 0.549857 | 6.1:-5400172 | None:intergenic |
| CGGTATTGTGAAGCCCGGTA+TGG | 0.551104 | 6.1:+5400811 | MS.gene074183:CDS |
| CCCCTAAGTACTCGAAGGCC+AGG | 0.553487 | 6.1:+5400516 | MS.gene074183:CDS |
| TCGCCTTCAAATCCGGAGAT+GGG | 0.554334 | 6.1:-5400614 | None:intergenic |
| TTCTTGAAGAATGGTGATGC+TGG | 0.554703 | 6.1:+5401181 | MS.gene074183:CDS |
| TGCACAGTCATTGATGCACC+TGG | 0.556287 | 6.1:+5400032 | MS.gene074183:CDS |
| ATCTTGCAATGGAAGCCTGA+GGG | 0.556985 | 6.1:-5400738 | None:intergenic |
| TGTTGCTGTTGGTGTCATCA+AGG | 0.557300 | 6.1:+5401300 | MS.gene074183:CDS |
| CATACCGGGCTTCACAATAC+CGG | 0.558131 | 6.1:-5400810 | None:intergenic |
| ACCAACCTTGACTGGTACAA+GGG | 0.559612 | 6.1:+5400656 | MS.gene074183:CDS |
| TTGATGAAATCACGATGTCC+AGG | 0.561637 | 6.1:-5400050 | None:intergenic |
| GTAACCAACCTTCTTCAAGT+AGG | 0.562921 | 6.1:-5400567 | None:intergenic |
| GCAAAGGTCTCAACCACCAT+GGG | 0.563446 | 6.1:-5401229 | None:intergenic |
| AGTTGGCAGCTTCCTTGGCA+GGG | 0.564600 | 6.1:-5401000 | None:intergenic |
| GGTGGTTCATGATGATGACT+TGG | 0.569890 | 6.1:-5401030 | None:intergenic |
| AGCTTCAAAACCACCAGTGG+TGG | 0.571917 | 6.1:-5400126 | None:intergenic |
| AAATCCGGAGATGGGAACAA+AGG | 0.575106 | 6.1:-5400606 | None:intergenic |
| TTGGTCCCTTGTACCAGTCA+AGG | 0.575920 | 6.1:-5400661 | None:intergenic |
| GACTGTGCAGTAGTACTTGG+TGG | 0.578462 | 6.1:-5400018 | None:intergenic |
| TGCAAGAAGAGCGTGCTCAC+GGG | 0.579779 | 6.1:-5400171 | None:intergenic |
| TGTTAAGAATGTTGCTGTGA+AGG | 0.579878 | 6.1:+5400937 | MS.gene074183:CDS |
| AGTTTAAGACATCATGGGAA+AGG | 0.580665 | 6.1:+5399761 | None:intergenic |
| ATGAACCACCCTGGACAGAT+CGG | 0.581582 | 6.1:+5401043 | MS.gene074183:CDS |
| CATGATTACTGGAACCTCCC+AGG | 0.581850 | 6.1:+5400076 | MS.gene074183:CDS |
| TCAAGAGCCTCAAGAAGAGT+TGG | 0.584894 | 6.1:-5400680 | None:intergenic |
| GAAGGATCCTACCGGAGCCA+AGG | 0.587221 | 6.1:+5401333 | MS.gene074183:CDS |
| ATCCGTTTCCGATCTGTCCA+GGG | 0.587827 | 6.1:-5401051 | None:intergenic |
| AACTTCAGTTGTCAAACCAG+TGG | 0.589445 | 6.1:-5400849 | None:intergenic |
| AATGACTGTGCAGTAGTACT+TGG | 0.591989 | 6.1:-5400021 | None:intergenic |
| GAAGCTGGTATCTCTAAGGA+TGG | 0.592030 | 6.1:+5400143 | MS.gene074183:CDS |
| CCAGTTGGACGTGTTGAGAC+CGG | 0.592088 | 6.1:+5400791 | MS.gene074183:CDS |
| ATCTTGTAAACATCTTGCAA+TGG | 0.592677 | 6.1:-5400749 | None:intergenic |
| TTTGCTGAATATCCTCCACT+TGG | 0.598309 | 6.1:+5401247 | MS.gene074183:CDS |
| GAGGTGTGACAATCAAGCAC+TGG | 0.601945 | 6.1:-5401079 | None:intergenic |
| GGTCACTTGATCTACAAGCT+AGG | 0.604596 | 6.1:+5399846 | MS.gene074183:CDS |
| TTTCCACAAGGCAATATCGA+TGG | 0.606438 | 6.1:-5399988 | None:intergenic |
| AAGAACAGCACAATCAGCCT+GGG | 0.607202 | 6.1:-5400093 | None:intergenic |
| TGTTGGTGTCATCAAGGCTG+TGG | 0.608422 | 6.1:+5401306 | MS.gene074183:CDS |
| GATGGTTCCCACCAAGCCCA+TGG | 0.611182 | 6.1:+5401213 | MS.gene074183:CDS |
| GCGTTCATTCAAGTACGCAT+GGG | 0.615188 | 6.1:+5399926 | MS.gene074183:CDS |
| ACTTCAGTTGTCAAACCAGT+GGG | 0.615673 | 6.1:-5400848 | None:intergenic |
| AGCAAAGGTCTCAACCACCA+TGG | 0.617611 | 6.1:-5401230 | None:intergenic |
| CTCCAAGGATGACCCTGCCA+AGG | 0.619064 | 6.1:+5400988 | MS.gene074183:CDS |
| ATGCGTCAAACTGTTGCTGT+TGG | 0.619748 | 6.1:+5401289 | MS.gene074183:CDS |
| GTGGAGAAGAAGGATCCTAC+CGG | 0.623203 | 6.1:+5401325 | MS.gene074183:CDS |
| GAGACCGGTATTGTGAAGCC+CGG | 0.625104 | 6.1:+5400806 | MS.gene074183:CDS |
| TTTGTGACCTTGGCTCCGGT+AGG | 0.627427 | 6.1:-5401340 | None:intergenic |
| TCTTGCAATGGAAGCCTGAG+GGG | 0.631058 | 6.1:-5400737 | None:intergenic |
| AAGGCGACAACATGATTGAG+AGG | 0.632475 | 6.1:+5400630 | MS.gene074183:CDS |
| CAAGGGACCAACTCTTCTTG+AGG | 0.634066 | 6.1:+5400673 | MS.gene074183:CDS |
| ATCTGGTAAGGAGATTGAGA+AGG | 0.634092 | 6.1:+5401150 | MS.gene074183:CDS |
| GATGATCTGTTGTTGTAACA+AGG | 0.635291 | 6.1:+5400214 | MS.gene074183:CDS |
| GTCATCATCATGAACCACCC+TGG | 0.635348 | 6.1:+5401034 | MS.gene074183:CDS |
| TGATGCTGGTATCATTAAGA+TGG | 0.636151 | 6.1:+5401195 | MS.gene074183:CDS |
| TGTGATCGAGAGATTCGAGA+AGG | 0.638590 | 6.1:+5399884 | MS.gene074183:CDS |
| CCTGGCCTTCGAGTACTTAG+GGG | 0.644615 | 6.1:-5400516 | None:intergenic |
| CACTTGATCTACAAGCTAGG+AGG | 0.645428 | 6.1:+5399849 | MS.gene074183:CDS |
| TTACCATCGATATTGCCTTG+TGG | 0.647445 | 6.1:+5399985 | MS.gene074183:CDS |
| GGTATTGGAACTGTGCCAGT+TGG | 0.649080 | 6.1:+5400776 | MS.gene074183:CDS |
| GCTCTTCCAGGAGACAATGT+CGG | 0.651488 | 6.1:+5400908 | MS.gene074183:CDS |
| TTTCGTAGCATCCAACTCCA+AGG | 0.653237 | 6.1:+5400973 | MS.gene074183:CDS |
| AAACTTCACAGCAATGTGAG+AGG | 0.653594 | 6.1:-5401098 | None:intergenic |
| AACAGCACAATCAGCCTGGG+AGG | 0.653730 | 6.1:-5400090 | None:intergenic |
| CATCTTGCAATGGAAGCCTG+AGG | 0.654491 | 6.1:-5400739 | None:intergenic |
| ACAGCAAAACGTCCAAGTGG+AGG | 0.656142 | 6.1:-5401259 | None:intergenic |
| GGCCTTCGAGTACTTAGGGG+TGG | 0.657553 | 6.1:-5400513 | None:intergenic |
| CAGGTACGATGAAATCGTGA+AGG | 0.661162 | 6.1:+5400535 | MS.gene074183:CDS |
| TACCGGAGCCAAGGTCACAA+AGG | 0.662726 | 6.1:+5401342 | MS.gene074183:CDS |
| ACCAGCTTCAAAACCACCAG+TGG | 0.669846 | 6.1:-5400129 | None:intergenic |
| AAGTGGAGGATATTCAGCAA+AGG | 0.671437 | 6.1:-5401245 | None:intergenic |
| CGTTTCCGATCTGTCCAGGG+TGG | 0.684114 | 6.1:-5401048 | None:intergenic |
| CTGACAGCAAAACGTCCAAG+TGG | 0.689307 | 6.1:-5401262 | None:intergenic |
| GTGGTTCATGATGATGACTT+GGG | 0.690284 | 6.1:-5401029 | None:intergenic |
| TACCACCCCTAAGTACTCGA+AGG | 0.691722 | 6.1:+5400511 | MS.gene074183:CDS |
| GGTGGTCTCAAATTTCCACA+AGG | 0.697133 | 6.1:-5400000 | None:intergenic |
| GCTGTGAAGGATCTCAAGCG+TGG | 0.706441 | 6.1:+5400950 | MS.gene074183:CDS |
| GGTTCCCACCAAGCCCATGG+TGG | 0.716413 | 6.1:+5401216 | MS.gene074183:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATGTTATATCTAGTTG+TGG | + | chr6.1:5400448-5400467 | MS.gene074183:intron | 20.0% |
| !!! | TTTCAATATTTTGTTTCAGA+TGG | + | chr6.1:5400484-5400503 | MS.gene074183:intron | 20.0% |
| ATCTTGTAAACATCTTGCAA+TGG | - | chr6.1:5400752-5400771 | None:intergenic | 30.0% | |
| TTCATCAAGAACATGATTAC+TGG | + | chr6.1:5400065-5400084 | MS.gene074183:CDS | 30.0% | |
| TTGCAAGATGTTTACAAGAT+TGG | + | chr6.1:5400752-5400771 | MS.gene074183:CDS | 30.0% | |
| ! | TACTAAATATGTTGAGTTGC+AGG | + | chr6.1:5400282-5400301 | MS.gene074183:intron | 30.0% |
| AGTTTCATCCTACTTGAAGA+AGG | + | chr6.1:5400559-5400578 | MS.gene074183:CDS | 35.0% | |
| ATGGGTTCTTGACAAACTTA+AGG | + | chr6.1:5399944-5399963 | MS.gene074183:CDS | 35.0% | |
| CAAGATGTTTACAAGATTGG+TGG | + | chr6.1:5400755-5400774 | MS.gene074183:CDS | 35.0% | |
| CATATCAACATTGTCGTCAT+TGG | + | chr6.1:5399792-5399811 | MS.gene074183:CDS | 35.0% | |
| GATGATCTGTTGTTGTAACA+AGG | + | chr6.1:5400214-5400233 | MS.gene074183:CDS | 35.0% | |
| TCACCATTCTTCAAGAACTT+AGG | - | chr6.1:5401178-5401197 | None:intergenic | 35.0% | |
| TCTGGAAAATCAACAACAAC+TGG | + | chr6.1:5399825-5399844 | MS.gene074183:CDS | 35.0% | |
| TGATGCTGGTATCATTAAGA+TGG | + | chr6.1:5401195-5401214 | MS.gene074183:CDS | 35.0% | |
| TGTTAAGAATGTTGCTGTGA+AGG | + | chr6.1:5400937-5400956 | MS.gene074183:CDS | 35.0% | |
| ! | GAACAAAGGGAATTTTGTCT+GGG | - | chr6.1:5400595-5400614 | None:intergenic | 35.0% |
| ! | GTTTACAAGATTGGTGGTAT+TGG | + | chr6.1:5400761-5400780 | MS.gene074183:CDS | 35.0% |
| !! | AACTTGTTACCAAGATTGAC+AGG | + | chr6.1:5401125-5401144 | MS.gene074183:CDS | 35.0% |
| !!! | TTTTGAAGCTGGTATCTCTA+AGG | + | chr6.1:5400139-5400158 | MS.gene074183:CDS | 35.0% |
| AAACTTCACAGCAATGTGAG+AGG | - | chr6.1:5401101-5401120 | None:intergenic | 40.0% | |
| AACTTCAGTTGTCAAACCAG+TGG | - | chr6.1:5400852-5400871 | None:intergenic | 40.0% | |
| AAGTGGAGGATATTCAGCAA+AGG | - | chr6.1:5401248-5401267 | None:intergenic | 40.0% | |
| AATGACTGTGCAGTAGTACT+TGG | - | chr6.1:5400024-5400043 | None:intergenic | 40.0% | |
| ACTTCAGTTGTCAAACCAGT+GGG | - | chr6.1:5400851-5400870 | None:intergenic | 40.0% | |
| ATCTGGTAAGGAGATTGAGA+AGG | + | chr6.1:5401150-5401169 | MS.gene074183:CDS | 40.0% | |
| CTAGTTGTGGATTCTGACTT+TGG | + | chr6.1:5400461-5400480 | MS.gene074183:intron | 40.0% | |
| GAGCCTAAGTTCTTGAAGAA+TGG | + | chr6.1:5401172-5401191 | MS.gene074183:CDS | 40.0% | |
| GCTCTTCTTGCATTTACTCT+TGG | + | chr6.1:5400182-5400201 | MS.gene074183:CDS | 40.0% | |
| GTAACCAACCTTCTTCAAGT+AGG | - | chr6.1:5400570-5400589 | None:intergenic | 40.0% | |
| TCATCCTACTTGAAGAAGGT+TGG | + | chr6.1:5400563-5400582 | MS.gene074183:CDS | 40.0% | |
| TCCAAAAGTCACAACCATAC+CGG | - | chr6.1:5400828-5400847 | None:intergenic | 40.0% | |
| TTACCATCGATATTGCCTTG+TGG | + | chr6.1:5399985-5400004 | MS.gene074183:CDS | 40.0% | |
| TTGATGAAATCACGATGTCC+AGG | - | chr6.1:5400053-5400072 | None:intergenic | 40.0% | |
| TTTCCACAAGGCAATATCGA+TGG | - | chr6.1:5399991-5400010 | None:intergenic | 40.0% | |
| TTTGCTGAATATCCTCCACT+TGG | + | chr6.1:5401247-5401266 | MS.gene074183:CDS | 40.0% | |
| ! | GGAACAAAGGGAATTTTGTC+TGG | - | chr6.1:5400596-5400615 | None:intergenic | 40.0% |
| ! | GTGGTTCATGATGATGACTT+GGG | - | chr6.1:5401032-5401051 | None:intergenic | 40.0% |
| ! | TTCTTGAAGAATGGTGATGC+TGG | + | chr6.1:5401181-5401200 | MS.gene074183:CDS | 40.0% |
| !! | TGACTTGCTGATTCTGACTT+TGG | + | chr6.1:5400370-5400389 | MS.gene074183:intron | 40.0% |
| AAATCCGGAGATGGGAACAA+AGG | - | chr6.1:5400609-5400628 | None:intergenic | 45.0% | |
| AAGAACAGCACAATCAGCCT+GGG | - | chr6.1:5400096-5400115 | None:intergenic | 45.0% | |
| AAGGCGACAACATGATTGAG+AGG | + | chr6.1:5400630-5400649 | MS.gene074183:CDS | 45.0% | |
| AATCCGGAGATGGGAACAAA+GGG | - | chr6.1:5400608-5400627 | None:intergenic | 45.0% | |
| ACCAACCTTGACTGGTACAA+GGG | + | chr6.1:5400656-5400675 | MS.gene074183:CDS | 45.0% | |
| AGCGTTCATTCAAGTACGCA+TGG | + | chr6.1:5399925-5399944 | MS.gene074183:CDS | 45.0% | |
| ATCTTGCAATGGAAGCCTGA+GGG | - | chr6.1:5400741-5400760 | None:intergenic | 45.0% | |
| ATGCGTCAAACTGTTGCTGT+TGG | + | chr6.1:5401289-5401308 | MS.gene074183:CDS | 45.0% | |
| ATTCCCTTTGTTCCCATCTC+CGG | + | chr6.1:5400602-5400621 | MS.gene074183:CDS | 45.0% | |
| CACTTGATCTACAAGCTAGG+AGG | + | chr6.1:5399849-5399868 | MS.gene074183:CDS | 45.0% | |
| CAGGTACGATGAAATCGTGA+AGG | + | chr6.1:5400535-5400554 | MS.gene074183:CDS | 45.0% | |
| CATGTTGTCGCCTTCAAATC+CGG | - | chr6.1:5400624-5400643 | None:intergenic | 45.0% | |
| CCAAAAGTCACAACCATACC+GGG | - | chr6.1:5400827-5400846 | None:intergenic | 45.0% | |
| CTTCACGATTTCATCGTACC+TGG | - | chr6.1:5400537-5400556 | None:intergenic | 45.0% | |
| GCGTTCATTCAAGTACGCAT+GGG | + | chr6.1:5399926-5399945 | MS.gene074183:CDS | 45.0% | |
| GGTCACTTGATCTACAAGCT+AGG | + | chr6.1:5399846-5399865 | MS.gene074183:CDS | 45.0% | |
| GGTGGTCTCAAATTTCCACA+AGG | - | chr6.1:5400003-5400022 | None:intergenic | 45.0% | |
| TAAGAACAGCACAATCAGCC+TGG | - | chr6.1:5400097-5400116 | None:intergenic | 45.0% | |
| TCAAGAGCCTCAAGAAGAGT+TGG | - | chr6.1:5400683-5400702 | None:intergenic | 45.0% | |
| TGTGATCGAGAGATTCGAGA+AGG | + | chr6.1:5399884-5399903 | MS.gene074183:CDS | 45.0% | |
| TTGAATCCGACATTGTCTCC+TGG | - | chr6.1:5400917-5400936 | None:intergenic | 45.0% | |
| TTTCGTAGCATCCAACTCCA+AGG | + | chr6.1:5400973-5400992 | MS.gene074183:CDS | 45.0% | |
| ! | GAAGCTGGTATCTCTAAGGA+TGG | + | chr6.1:5400143-5400162 | MS.gene074183:CDS | 45.0% |
| ! | GATGACTTGGGAAGTGAAGT+TGG | - | chr6.1:5401020-5401039 | None:intergenic | 45.0% |
| ! | GGTGGTTCATGATGATGACT+TGG | - | chr6.1:5401033-5401052 | None:intergenic | 45.0% |
| !! | ACTTGGACGTTTTGCTGTCA+GGG | + | chr6.1:5401264-5401283 | MS.gene074183:CDS | 45.0% |
| !! | CTTATCATTGACTCCACCAC+TGG | + | chr6.1:5400113-5400132 | MS.gene074183:CDS | 45.0% |
| !! | TGTTGCTGTTGGTGTCATCA+AGG | + | chr6.1:5401300-5401319 | MS.gene074183:CDS | 45.0% |
| ACAGCAAAACGTCCAAGTGG+AGG | - | chr6.1:5401262-5401281 | None:intergenic | 50.0% | |
| ACCAAGATTGACAGGCGATC+TGG | + | chr6.1:5401133-5401152 | MS.gene074183:CDS | 50.0% | |
| ACCAGATCGCCTGTCAATCT+TGG | - | chr6.1:5401137-5401156 | None:intergenic | 50.0% | |
| ACCAGCTTCAAAACCACCAG+TGG | - | chr6.1:5400132-5400151 | None:intergenic | 50.0% | |
| AGCAAAGGTCTCAACCACCA+TGG | - | chr6.1:5401233-5401252 | None:intergenic | 50.0% | |
| AGCTTCAAAACCACCAGTGG+TGG | - | chr6.1:5400129-5400148 | None:intergenic | 50.0% | |
| AGTGAAGTTGGCAGCTTCCT+TGG | - | chr6.1:5401008-5401027 | None:intergenic | 50.0% | |
| ATCCGTTTCCGATCTGTCCA+GGG | - | chr6.1:5401054-5401073 | None:intergenic | 50.0% | |
| ATGAACCACCCTGGACAGAT+CGG | + | chr6.1:5401043-5401062 | MS.gene074183:CDS | 50.0% | |
| CAAGGGACCAACTCTTCTTG+AGG | + | chr6.1:5400673-5400692 | MS.gene074183:CDS | 50.0% | |
| CACCAACCTTGACTGGTACA+AGG | + | chr6.1:5400655-5400674 | MS.gene074183:CDS | 50.0% | |
| CATACCGGGCTTCACAATAC+CGG | - | chr6.1:5400813-5400832 | None:intergenic | 50.0% | |
| CATCAAGGCTGTGGAGAAGA+AGG | + | chr6.1:5401315-5401334 | MS.gene074183:CDS | 50.0% | |
| CATCTTGCAATGGAAGCCTG+AGG | - | chr6.1:5400742-5400761 | None:intergenic | 50.0% | |
| CATGATTACTGGAACCTCCC+AGG | + | chr6.1:5400076-5400095 | MS.gene074183:CDS | 50.0% | |
| CTGACAGCAAAACGTCCAAG+TGG | - | chr6.1:5401265-5401284 | None:intergenic | 50.0% | |
| CTTAAGGCTGAGCGTGAAAG+AGG | + | chr6.1:5399960-5399979 | MS.gene074183:CDS | 50.0% | |
| CTTGTACCAGTCAAGGTTGG+TGG | - | chr6.1:5400657-5400676 | None:intergenic | 50.0% | |
| GACTGTGCAGTAGTACTTGG+TGG | - | chr6.1:5400021-5400040 | None:intergenic | 50.0% | |
| GAGGTGTGACAATCAAGCAC+TGG | - | chr6.1:5401082-5401101 | None:intergenic | 50.0% | |
| GATTGACAGGCGATCTGGTA+AGG | + | chr6.1:5401138-5401157 | MS.gene074183:CDS | 50.0% | |
| GCAAAGGTCTCAACCACCAT+GGG | - | chr6.1:5401232-5401251 | None:intergenic | 50.0% | |
| GCTCTTCCAGGAGACAATGT+CGG | + | chr6.1:5400908-5400927 | MS.gene074183:CDS | 50.0% | |
| GTCATCATCATGAACCACCC+TGG | + | chr6.1:5401034-5401053 | MS.gene074183:CDS | 50.0% | |
| GTGGAGAAGAAGGATCCTAC+CGG | + | chr6.1:5401325-5401344 | MS.gene074183:CDS | 50.0% | |
| GTTCCCATCTCCGGATTTGA+AGG | + | chr6.1:5400611-5400630 | MS.gene074183:CDS | 50.0% | |
| TACCACCCCTAAGTACTCGA+AGG | + | chr6.1:5400511-5400530 | MS.gene074183:CDS | 50.0% | |
| TATCCGTTTCCGATCTGTCC+AGG | - | chr6.1:5401055-5401074 | None:intergenic | 50.0% | |
| TCCCTTGTACCAGTCAAGGT+TGG | - | chr6.1:5400660-5400679 | None:intergenic | 50.0% | |
| TCGCCTTCAAATCCGGAGAT+GGG | - | chr6.1:5400617-5400636 | None:intergenic | 50.0% | |
| TCTTGCAATGGAAGCCTGAG+GGG | - | chr6.1:5400740-5400759 | None:intergenic | 50.0% | |
| TGCACAGTCATTGATGCACC+TGG | + | chr6.1:5400032-5400051 | MS.gene074183:CDS | 50.0% | |
| TTGGTCCCTTGTACCAGTCA+AGG | - | chr6.1:5400664-5400683 | None:intergenic | 50.0% | |
| ! | ACCTGGCCTTCGAGTACTTA+GGG | - | chr6.1:5400520-5400539 | None:intergenic | 50.0% |
| ! | ATGCAAGAAGAGCGTGCTCA+CGG | - | chr6.1:5400175-5400194 | None:intergenic | 50.0% |
| ! | CCCGGTATGGTTGTGACTTT+TGG | + | chr6.1:5400824-5400843 | MS.gene074183:CDS | 50.0% |
| ! | GGTATTGGAACTGTGCCAGT+TGG | + | chr6.1:5400776-5400795 | MS.gene074183:CDS | 50.0% |
| ! | GTCTCTTTGGCTCGTTGATC+TGG | - | chr6.1:5400706-5400725 | None:intergenic | 50.0% |
| ! | GTTGTGACTTTTGGACCCAC+TGG | + | chr6.1:5400833-5400852 | MS.gene074183:CDS | 50.0% |
| ! | TACCTGGCCTTCGAGTACTT+AGG | - | chr6.1:5400521-5400540 | None:intergenic | 50.0% |
| !! | ATCATTGACTCCACCACTGG+TGG | + | chr6.1:5400116-5400135 | MS.gene074183:CDS | 50.0% |
| !! | CACTTGGACGTTTTGCTGTC+AGG | + | chr6.1:5401263-5401282 | MS.gene074183:CDS | 50.0% |
| !! | GTCATTGGACATGTCGACTC+TGG | + | chr6.1:5399807-5399826 | MS.gene074183:CDS | 50.0% |
| !! | TGTTGGTGTCATCAAGGCTG+TGG | + | chr6.1:5401306-5401325 | MS.gene074183:CDS | 50.0% |
| !!! | ACCACTGGTGGTTTTGAAGC+TGG | + | chr6.1:5400128-5400147 | MS.gene074183:CDS | 50.0% |
| AACAGCACAATCAGCCTGGG+AGG | - | chr6.1:5400093-5400112 | None:intergenic | 55.0% | |
| AAGTTGGCAGCTTCCTTGGC+AGG | - | chr6.1:5401004-5401023 | None:intergenic | 55.0% | |
| AGAGGTCCACCAACCTTGAC+TGG | + | chr6.1:5400648-5400667 | MS.gene074183:CDS | 55.0% | |
| AGCCTTTGTGACCTTGGCTC+CGG | - | chr6.1:5401347-5401366 | None:intergenic | 55.0% | |
| AGTTGGCAGCTTCCTTGGCA+GGG | - | chr6.1:5401003-5401022 | None:intergenic | 55.0% | |
| CACCCTGGACAGATCGGAAA+CGG | + | chr6.1:5401049-5401068 | MS.gene074183:CDS | 55.0% | |
| CCAGTTGGACGTGTTGAGAC+CGG | + | chr6.1:5400791-5400810 | MS.gene074183:CDS | 55.0% | |
| CGGTATTGTGAAGCCCGGTA+TGG | + | chr6.1:5400811-5400830 | MS.gene074183:CDS | 55.0% | |
| GAGACCGGTATTGTGAAGCC+CGG | + | chr6.1:5400806-5400825 | MS.gene074183:CDS | 55.0% | |
| GCTCTCACTGAAGCTCTTCC+AGG | + | chr6.1:5400896-5400915 | MS.gene074183:CDS | 55.0% | |
| GCTGTGAAGGATCTCAAGCG+TGG | + | chr6.1:5400950-5400969 | MS.gene074183:CDS | 55.0% | |
| GGCTTGTCTGTGGGTCTCTT+TGG | - | chr6.1:5400719-5400738 | None:intergenic | 55.0% | |
| GTCGCCTTCAAATCCGGAGA+TGG | - | chr6.1:5400618-5400637 | None:intergenic | 55.0% | |
| TACCGGAGCCAAGGTCACAA+AGG | + | chr6.1:5401342-5401361 | MS.gene074183:CDS | 55.0% | |
| TTCCTTGGCAGGGTCATCCT+TGG | - | chr6.1:5400993-5401012 | None:intergenic | 55.0% | |
| TTTGTGACCTTGGCTCCGGT+AGG | - | chr6.1:5401343-5401362 | None:intergenic | 55.0% | |
| ! | CCTGGCCTTCGAGTACTTAG+GGG | - | chr6.1:5400519-5400538 | None:intergenic | 55.0% |
| ! | TCAACCACCATGGGCTTGGT+GGG | - | chr6.1:5401223-5401242 | None:intergenic | 55.0% |
| ! | TGCAAGAAGAGCGTGCTCAC+GGG | - | chr6.1:5400174-5400193 | None:intergenic | 55.0% |
| AAGCCTGAGGGGCTTGTCTG+TGG | - | chr6.1:5400729-5400748 | None:intergenic | 60.0% | |
| AGCCTGAGGGGCTTGTCTGT+GGG | - | chr6.1:5400728-5400747 | None:intergenic | 60.0% | |
| CCCCTAAGTACTCGAAGGCC+AGG | + | chr6.1:5400516-5400535 | MS.gene074183:CDS | 60.0% | |
| CCGGTCTCAACACGTCCAAC+TGG | - | chr6.1:5400794-5400813 | None:intergenic | 60.0% | |
| CGTTTCCGATCTGTCCAGGG+TGG | - | chr6.1:5401051-5401070 | None:intergenic | 60.0% | |
| CTCAACCACCATGGGCTTGG+TGG | - | chr6.1:5401224-5401243 | None:intergenic | 60.0% | |
| CTCCAAGGATGACCCTGCCA+AGG | + | chr6.1:5400988-5401007 | MS.gene074183:CDS | 60.0% | |
| GAAGGATCCTACCGGAGCCA+AGG | + | chr6.1:5401333-5401352 | MS.gene074183:CDS | 60.0% | |
| GATGGTTCCCACCAAGCCCA+TGG | + | chr6.1:5401213-5401232 | MS.gene074183:CDS | 60.0% | |
| GGCAGCAGCCTTTGTGACCT+TGG | - | chr6.1:5401353-5401372 | None:intergenic | 60.0% | |
| GGCAGGGTCATCCTTGGAGT+TGG | - | chr6.1:5400987-5401006 | None:intergenic | 60.0% | |
| GGCCTTCGAGTACTTAGGGG+TGG | - | chr6.1:5400516-5400535 | None:intergenic | 60.0% | |
| GGTCTCAACCACCATGGGCT+TGG | - | chr6.1:5401227-5401246 | None:intergenic | 60.0% | |
| GACCCACAGACAAGCCCCTC+AGG | + | chr6.1:5400723-5400742 | MS.gene074183:CDS | 65.0% | |
| GGTTCCCACCAAGCCCATGG+TGG | + | chr6.1:5401216-5401235 | MS.gene074183:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 5399774 | 5401384 | 5399774 | ID=MS.gene074183 |
| chr6.1 | mRNA | 5399774 | 5401384 | 5399774 | ID=MS.gene074183.t1;Parent=MS.gene074183 |
| chr6.1 | exon | 5399774 | 5400235 | 5399774 | ID=MS.gene074183.t1.exon1;Parent=MS.gene074183.t1 |
| chr6.1 | CDS | 5399774 | 5400235 | 5399774 | ID=cds.MS.gene074183.t1;Parent=MS.gene074183.t1 |
| chr6.1 | exon | 5400503 | 5401384 | 5400503 | ID=MS.gene074183.t1.exon2;Parent=MS.gene074183.t1 |
| chr6.1 | CDS | 5400503 | 5401384 | 5400503 | ID=cds.MS.gene074183.t1;Parent=MS.gene074183.t1 |
| Gene Sequence |
| Protein sequence |