Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041769.t1 | XP_003591959.2 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 1.60E-259 | 904.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041769.t1 | O24534 | 95.5 | 448 | 19 | 1 | 1 | 448 | 1 | 447 | 9.3e-253 | 873.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041769.t1 | G7I9L3 | 99.8 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 1.1e-259 | 904.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041769.t1 | MTR_1g495705 | 99.777 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 0.0 | 920 |
| MS.gene041769.t1 | MTR_1g095650 | 99.777 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 0.0 | 920 |
| MS.gene041769.t1 | MTR_1g095703 | 99.554 | 448 | 2 | 0 | 1 | 448 | 1 | 448 | 0.0 | 920 |
| MS.gene041769.t1 | MTR_4g014810 | 96.205 | 448 | 16 | 1 | 1 | 448 | 1 | 447 | 0.0 | 889 |
| MS.gene041769.t1 | MTR_6g021800 | 97.477 | 436 | 11 | 0 | 1 | 436 | 1 | 436 | 0.0 | 887 |
| MS.gene041769.t1 | MTR_6g021805 | 97.477 | 436 | 11 | 0 | 1 | 436 | 1 | 436 | 0.0 | 887 |
| MS.gene041769.t1 | MTR_1g013680 | 95.565 | 451 | 17 | 1 | 1 | 448 | 1 | 451 | 0.0 | 882 |
| MS.gene041769.t1 | MTR_1g085410 | 82.488 | 434 | 76 | 0 | 1 | 434 | 1 | 434 | 0.0 | 743 |
| MS.gene041769.t1 | MTR_1g101870 | 81.922 | 437 | 74 | 3 | 1 | 437 | 1 | 432 | 0.0 | 735 |
| MS.gene041769.t1 | MTR_1g101870 | 81.922 | 437 | 74 | 3 | 1 | 437 | 1 | 432 | 0.0 | 734 |
| MS.gene041769.t1 | MTR_1g024175 | 79.032 | 434 | 91 | 0 | 1 | 434 | 1 | 434 | 0.0 | 726 |
| MS.gene041769.t1 | MTR_8g014590 | 79.733 | 449 | 89 | 1 | 1 | 447 | 1 | 449 | 0.0 | 722 |
| MS.gene041769.t1 | MTR_1g095650 | 99.712 | 347 | 1 | 0 | 102 | 448 | 1 | 347 | 0.0 | 712 |
| MS.gene041769.t1 | MTR_2g082730 | 71.141 | 447 | 111 | 3 | 1 | 445 | 1 | 431 | 0.0 | 644 |
| MS.gene041769.t1 | MTR_5g037350 | 67.660 | 470 | 115 | 1 | 3 | 435 | 13 | 482 | 0.0 | 634 |
| MS.gene041769.t1 | MTR_1g089520 | 71.163 | 430 | 106 | 3 | 4 | 432 | 5 | 417 | 0.0 | 627 |
| MS.gene041769.t1 | MTR_2g082665 | 66.219 | 447 | 107 | 3 | 1 | 445 | 1 | 405 | 0.0 | 586 |
| MS.gene041769.t1 | MTR_2g037420 | 65.589 | 433 | 106 | 3 | 1 | 431 | 1 | 392 | 0.0 | 561 |
| MS.gene041769.t1 | MTR_8g013910 | 63.920 | 449 | 127 | 5 | 1 | 433 | 1 | 430 | 0.0 | 551 |
| MS.gene041769.t1 | MTR_2g080210 | 64.598 | 435 | 118 | 4 | 1 | 432 | 1 | 402 | 0.0 | 550 |
| MS.gene041769.t1 | MTR_8g008740 | 78.221 | 326 | 70 | 1 | 1 | 325 | 1 | 326 | 0.0 | 540 |
| MS.gene041769.t1 | MTR_1g112460 | 66.107 | 298 | 60 | 4 | 155 | 447 | 1 | 262 | 5.10e-127 | 369 |
| MS.gene041769.t1 | MTR_1g495735 | 76.119 | 201 | 38 | 1 | 240 | 430 | 106 | 306 | 4.14e-101 | 304 |
| MS.gene041769.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 5.20e-17 | 82.0 |
| MS.gene041769.t1 | MTR_6g080420 | 37.963 | 432 | 254 | 6 | 5 | 428 | 89 | 514 | 9.27e-97 | 300 |
| MS.gene041769.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 43 | 470 | 1.33e-93 | 291 |
| MS.gene041769.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 49 | 476 | 1.58e-93 | 291 |
| MS.gene041769.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 70 | 497 | 4.03e-93 | 290 |
| MS.gene041769.t1 | MTR_8g087950 | 35.797 | 433 | 269 | 6 | 7 | 433 | 275 | 704 | 4.41e-91 | 291 |
| MS.gene041769.t1 | MTR_8g087950 | 35.797 | 433 | 269 | 6 | 7 | 433 | 348 | 777 | 1.97e-90 | 291 |
| MS.gene041769.t1 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 8.11e-90 | 274 |
| MS.gene041769.t1 | MTR_4g054970 | 56.612 | 242 | 76 | 4 | 193 | 431 | 50 | 265 | 8.66e-81 | 251 |
| MS.gene041769.t1 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 7.74e-13 | 68.9 |
| MS.gene041769.t1 | MTR_1g024165 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 1.51e-78 | 241 |
| MS.gene041769.t1 | MTR_8g014950 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 1.54e-47 | 159 |
| MS.gene041769.t1 | MTR_7g094460 | 30.594 | 438 | 244 | 14 | 3 | 429 | 59 | 447 | 5.74e-46 | 165 |
| MS.gene041769.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 8.52e-43 | 149 |
| MS.gene041769.t1 | MTR_2g021300 | 29.613 | 439 | 247 | 12 | 3 | 429 | 46 | 434 | 4.29e-42 | 154 |
| MS.gene041769.t1 | MTR_3g076660 | 29.955 | 444 | 250 | 15 | 3 | 429 | 88 | 487 | 4.94e-41 | 152 |
| MS.gene041769.t1 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 213 | 294 | 2 | 83 | 2.38e-28 | 110 |
| MS.gene041769.t1 | MTR_3g097250 | 26.471 | 272 | 143 | 9 | 9 | 272 | 85 | 307 | 1.38e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041769.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene041769.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene041769.t1 | AT5G60390 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene041769.t1 | AT1G07920 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene041769.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene041769.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene041769.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene041769.t1 | AT1G07940 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene041769.t1 | AT1G07930 | 95.078 | 447 | 21 | 1 | 1 | 447 | 1 | 446 | 0.0 | 882 |
| MS.gene041769.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 529 |
| MS.gene041769.t1 | AT1G07930 | 87.179 | 117 | 14 | 1 | 331 | 447 | 254 | 369 | 9.04e-65 | 213 |
| MS.gene041769.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 5.85e-94 | 293 |
| MS.gene041769.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 5.85e-94 | 293 |
| MS.gene041769.t1 | AT1G18070 | 36.927 | 436 | 256 | 6 | 5 | 424 | 99 | 531 | 6.61e-91 | 286 |
| MS.gene041769.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 239 | 660 | 2.50e-90 | 288 |
| MS.gene041769.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 240 | 661 | 2.55e-90 | 288 |
| MS.gene041769.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 240 | 661 | 2.55e-90 | 288 |
| MS.gene041769.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 310 | 731 | 1.83e-89 | 287 |
| MS.gene041769.t1 | AT5G10630 | 35.529 | 425 | 266 | 5 | 7 | 426 | 315 | 736 | 1.94e-89 | 287 |
| MS.gene041769.t1 | AT1G35550 | 78.641 | 103 | 22 | 0 | 335 | 437 | 1 | 103 | 1.53e-53 | 174 |
| MS.gene041769.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 6.19e-44 | 160 |
| MS.gene041769.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 6.19e-44 | 160 |
| MS.gene041769.t1 | AT4G02930 | 30.296 | 439 | 245 | 15 | 3 | 429 | 63 | 452 | 7.33e-44 | 160 |
| MS.gene041769.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 3.00e-12 | 69.3 |
| MS.gene041769.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.42e-11 | 66.2 |
| MS.gene041769.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.72e-11 | 66.2 |
| MS.gene041769.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 4.14e-11 | 65.5 |
Find 148 sgRNAs with CRISPR-Local
Find 160 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACCATTCTTCAAGAATT+TGG | 0.066665 | 1.1:-68972471 | None:intergenic |
| GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 1.1:+68971616 | MS.gene041769:CDS |
| GTCTACAAGATTGGAGGAAT+TGG | 0.315206 | 1.1:+68972056 | MS.gene041769:CDS |
| GCCTCTTAGGCTCATTGATT+TGG | 0.315866 | 1.1:-68971998 | None:intergenic |
| TGTCAAGAATGTTGCTGTTA+AGG | 0.325240 | 1.1:+68972232 | MS.gene041769:CDS |
| TCACCATTCTTCAAGAATTT+GGG | 0.331757 | 1.1:-68972470 | None:intergenic |
| ATAGCCAACCTTCTTCAAAT+AGG | 0.332380 | 1.1:-68971862 | None:intergenic |
| CTTCTTCTTCAATGCTGACT+TGG | 0.345006 | 1.1:-68972657 | None:intergenic |
| CACATCAACATTGTGGTCAT+TGG | 0.354316 | 1.1:+68971226 | MS.gene041769:CDS |
| TTCCTTGGCTGGGTCATCCT+TGG | 0.355973 | 1.1:-68972285 | None:intergenic |
| AAGTTGGCAGATTCCTTGGC+TGG | 0.367989 | 1.1:-68972296 | None:intergenic |
| ATTCCATTTGTTCCCATCTC+TGG | 0.368209 | 1.1:+68971897 | MS.gene041769:CDS |
| GCTCTCACAGAGGCCCTTCC+TGG | 0.369900 | 1.1:+68972191 | MS.gene041769:CDS |
| ATATCTACCCTTGGAGTACT+TGG | 0.380807 | 1.1:-68971814 | None:intergenic |
| ACTAAGATTGATAGGCGTTC+TGG | 0.382761 | 1.1:+68972428 | MS.gene041769:CDS |
| TGCGTCAAACTGTGGCTGTT+GGG | 0.386099 | 1.1:+68972585 | MS.gene041769:CDS |
| GTCATTGGCCATGTCGACTC+TGG | 0.395247 | 1.1:+68971241 | MS.gene041769:CDS |
| GCAAAAGTGACAACCATTCC+AGG | 0.418006 | 1.1:-68972119 | None:intergenic |
| CTCATCATTGATTCCACTAC+TGG | 0.419293 | 1.1:+68971547 | MS.gene041769:CDS |
| ATGAATCACCCTGGCCAGAT+TGG | 0.425183 | 1.1:+68972338 | MS.gene041769:CDS |
| CTTAATGAAATCCCTGTGTC+CGG | 0.429384 | 1.1:-68971485 | None:intergenic |
| CCTGTGGGGCGTGTCGAGAC+TGG | 0.431830 | 1.1:+68972086 | MS.gene041769:CDS |
| CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 1.1:+68972344 | MS.gene041769:CDS |
| TGTAAAGTTGGCAGATTCCT+TGG | 0.433201 | 1.1:-68972300 | None:intergenic |
| AGCGTTCATTCAAGTATGCC+TGG | 0.444655 | 1.1:+68971359 | MS.gene041769:CDS |
| GAGCATAGCCATTTCCAATC+TGG | 0.445726 | 1.1:-68972352 | None:intergenic |
| GGCTTGTCTGAAGGCCTCTT+AGG | 0.446650 | 1.1:-68972011 | None:intergenic |
| AAACCAGAGATGGGAACAAA+TGG | 0.449170 | 1.1:-68971900 | None:intergenic |
| GGTCTGCTTAAGTCCTCCAC+TGG | 0.451209 | 1.1:-68972636 | None:intergenic |
| ACTTCAGTTGTCAGTCCAGT+AGG | 0.456008 | 1.1:-68972143 | None:intergenic |
| CTACAGGATGTCTACAAGAT+TGG | 0.458825 | 1.1:+68972047 | MS.gene041769:CDS |
| AGTCTCAACCACCATGGGCT+TGG | 0.462350 | 1.1:-68972519 | None:intergenic |
| ACCAAATCAATGAGCCTAAG+AGG | 0.463105 | 1.1:+68971997 | MS.gene041769:CDS |
| TGGGTCATCCTTGGAGTTTG+AGG | 0.465051 | 1.1:-68972276 | None:intergenic |
| CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 1.1:-68972516 | None:intergenic |
| TAGGCTCATTGATTTGGTCA+AGG | 0.472707 | 1.1:-68971992 | None:intergenic |
| TTAATGAAATCCCTGTGTCC+GGG | 0.473933 | 1.1:-68971484 | None:intergenic |
| AGTCCAAATGGGTAAGGAAA+AGG | 0.474535 | 1.1:+68971201 | None:intergenic |
| AGGCTCATTGATTTGGTCAA+GGG | 0.475242 | 1.1:-68971991 | None:intergenic |
| AACTTGTTACTAAGATTGAT+AGG | 0.478352 | 1.1:+68972420 | MS.gene041769:CDS |
| TAGCCATTTCCAATCTGGCC+AGG | 0.481484 | 1.1:-68972347 | None:intergenic |
| TCACCATTGACATTGCTCTC+TGG | 0.481623 | 1.1:+68971419 | MS.gene041769:CDS |
| ACAGTCAGCTTGGGATGTTC+CGG | 0.483896 | 1.1:-68971518 | None:intergenic |
| TACAAACCTTGACTGGTACA+AGG | 0.490199 | 1.1:+68971950 | MS.gene041769:CDS |
| TCATCCTATTTGAAGAAGGT+TGG | 0.491235 | 1.1:+68971858 | MS.gene041769:CDS |
| GATTGATAGGCGTTCTGGTA+AGG | 0.495592 | 1.1:+68972433 | MS.gene041769:CDS |
| ATCTCCCTCAAAACCAGAGA+TGG | 0.496573 | 1.1:-68971910 | None:intergenic |
| TGAGAACGGCACAGTCAGCT+TGG | 0.498317 | 1.1:-68971528 | None:intergenic |
| CATCAAGGCTGTGGAGAAGA+AGG | 0.499167 | 1.1:+68972610 | MS.gene041769:CDS |
| CTGACCATCCTTAGAAATAC+CGG | 0.501461 | 1.1:-68971581 | None:intergenic |
| AGTTTCATCCTATTTGAAGA+AGG | 0.501588 | 1.1:+68971854 | MS.gene041769:CDS |
| ATCATTGATTCCACTACTGG+TGG | 0.502099 | 1.1:+68971550 | MS.gene041769:CDS |
| GAGGTGTGGCAGTCAAGAAC+AGG | 0.504238 | 1.1:-68972374 | None:intergenic |
| GAGAACGGCACAGTCAGCTT+GGG | 0.505334 | 1.1:-68971527 | None:intergenic |
| CTTCAGTTGTCAGTCCAGTA+GGG | 0.506099 | 1.1:-68972142 | None:intergenic |
| AATTTCATCATATCTACCCT+TGG | 0.508007 | 1.1:-68971823 | None:intergenic |
| AATGACAGTGCAGTAGTACT+TGG | 0.509426 | 1.1:-68971455 | None:intergenic |
| CTCTTAAGTCCAAATGGGTA+AGG | 0.512110 | 1.1:+68971195 | None:intergenic |
| AGGAATTGGAACTGTGCCTG+TGG | 0.517140 | 1.1:+68972070 | MS.gene041769:CDS |
| GATCACTTGAGATGTAAAGT+TGG | 0.519518 | 1.1:-68972312 | None:intergenic |
| GAGCCCAAATTCTTGAAGAA+TGG | 0.528480 | 1.1:+68972467 | MS.gene041769:CDS |
| TCCCACATTGTCACCAGGAA+GGG | 0.528721 | 1.1:-68972204 | None:intergenic |
| AGTCGGAGGGGCTTGTCTGA+AGG | 0.529275 | 1.1:-68972020 | None:intergenic |
| TGTTGGGGTCATCAAGGCTG+TGG | 0.532596 | 1.1:+68972601 | MS.gene041769:CDS |
| CAGGATGTCTACAAGATTGG+AGG | 0.535636 | 1.1:+68972050 | MS.gene041769:CDS |
| GGAATTGGAACTGTGCCTGT+GGG | 0.536194 | 1.1:+68972071 | MS.gene041769:CDS |
| CTTCCAGAGAGCAATGTCAA+TGG | 0.541189 | 1.1:-68971422 | None:intergenic |
| AGCAAACTTGACAGCAATGT+GGG | 0.543557 | 1.1:-68972396 | None:intergenic |
| TGCACTGTCATTGATGCCCC+CGG | 0.544718 | 1.1:+68971466 | MS.gene041769:CDS |
| GCCCCTCCGACTACCACTAC+AGG | 0.545601 | 1.1:+68972031 | MS.gene041769:CDS |
| CACTTGATCTACAAGCTTGG+AGG | 0.545798 | 1.1:+68971283 | MS.gene041769:CDS |
| TCAAGGGCCTCAAGAAGAGT+TGG | 0.546278 | 1.1:-68971975 | None:intergenic |
| TGTGGCTGTTGGGGTCATCA+AGG | 0.547535 | 1.1:+68972595 | MS.gene041769:CDS |
| GTCTGCTTAAGTCCTCCACT+GGG | 0.549538 | 1.1:-68972635 | None:intergenic |
| GGCTTCAAAACCACCAGTAG+TGG | 0.551737 | 1.1:-68971560 | None:intergenic |
| GGTCACTTGATCTACAAGCT+TGG | 0.555547 | 1.1:+68971280 | MS.gene041769:CDS |
| CCAGTCTCGACACGCCCCAC+AGG | 0.557031 | 1.1:-68972086 | None:intergenic |
| TCAACCACCATGGGCTTGGT+GGG | 0.557624 | 1.1:-68972515 | None:intergenic |
| AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 1.1:-68971606 | None:intergenic |
| TCATTGGCCATGTCGACTCT+GGG | 0.559180 | 1.1:+68971242 | MS.gene041769:CDS |
| CTCAAGGCTGAACGTGAAAG+AGG | 0.559327 | 1.1:+68971394 | MS.gene041769:CDS |
| TTCTTGAAGAATGGTGATGC+TGG | 0.561159 | 1.1:+68972476 | MS.gene041769:CDS |
| GAAGCCGGTATTTCTAAGGA+TGG | 0.564413 | 1.1:+68971577 | MS.gene041769:CDS |
| TCTGGGAAATCAACCACCAC+TGG | 0.564990 | 1.1:+68971259 | MS.gene041769:CDS |
| TTGGACCCTTGTACCAGTCA+AGG | 0.565802 | 1.1:-68971956 | None:intergenic |
| ACAAACCTTGACTGGTACAA+GGG | 0.567625 | 1.1:+68971951 | MS.gene041769:CDS |
| TAATGAAATCCCTGTGTCCG+GGG | 0.570266 | 1.1:-68971483 | None:intergenic |
| ATGCGTCAAACTGTGGCTGT+TGG | 0.571110 | 1.1:+68972584 | MS.gene041769:CDS |
| TTCATTAAGAACATGATCAC+CGG | 0.572337 | 1.1:+68971499 | MS.gene041769:CDS |
| AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 1.1:-68971605 | None:intergenic |
| GAGAAAGTCTCAACCACCAT+GGG | 0.575954 | 1.1:-68972524 | None:intergenic |
| CTTGAGCTTGTCAAGGACCC+AGG | 0.577041 | 1.1:-68971377 | None:intergenic |
| AGCGCTCTACAAACCTTGAC+TGG | 0.578233 | 1.1:+68971943 | MS.gene041769:CDS |
| TATCTACCCTTGGAGTACTT+GGG | 0.580849 | 1.1:-68971813 | None:intergenic |
| GCGTCAAACTGTGGCTGTTG+GGG | 0.582443 | 1.1:+68972586 | MS.gene041769:CDS |
| ATCCTGTAGTGGTAGTCGGA+GGG | 0.583230 | 1.1:-68972033 | None:intergenic |
| ATCCCACATTGTCACCAGGA+AGG | 0.585536 | 1.1:-68972205 | None:intergenic |
| GAGACTGGTGTCATAAAACC+TGG | 0.585699 | 1.1:+68972101 | MS.gene041769:CDS |
| CTGGGTCCTTGACAAGCTCA+AGG | 0.585742 | 1.1:+68971378 | MS.gene041769:CDS |
| AGTTGGCAGATTCCTTGGCT+GGG | 0.586600 | 1.1:-68972295 | None:intergenic |
| GGCCCTTCCTGGTGACAATG+TGG | 0.586985 | 1.1:+68972202 | MS.gene041769:CDS |
| TTGATTTCCCAGAGTCGACA+TGG | 0.588973 | 1.1:-68971249 | None:intergenic |
| CTGTTAAGGATCTCAAGCGT+GGG | 0.589274 | 1.1:+68972246 | MS.gene041769:CDS |
| TCCTGTAGTGGTAGTCGGAG+GGG | 0.589369 | 1.1:-68972032 | None:intergenic |
| TTCTCTGAATATCCTCCACT+CGG | 0.591172 | 1.1:+68972542 | MS.gene041769:CDS |
| GCCCTTCCTGGTGACAATGT+GGG | 0.592402 | 1.1:+68972203 | MS.gene041769:CDS |
| CTCCAAGGATGACCCAGCCA+AGG | 0.595225 | 1.1:+68972283 | MS.gene041769:CDS |
| TAGATATGATGAAATTGTGA+AGG | 0.599770 | 1.1:+68971830 | MS.gene041769:CDS |
| GCATGTCTCTAACAGCAAAA+CGG | 0.600985 | 1.1:-68972565 | None:intergenic |
| GCGTTCATTCAAGTATGCCT+GGG | 0.605879 | 1.1:+68971360 | MS.gene041769:CDS |
| GATGATTCCCACCAAGCCCA+TGG | 0.606444 | 1.1:+68972508 | MS.gene041769:CDS |
| TCTCCCTCAAAACCAGAGAT+GGG | 0.607478 | 1.1:-68971909 | None:intergenic |
| TACTACACCCAAGTACTCCA+AGG | 0.613862 | 1.1:+68971806 | MS.gene041769:CDS |
| TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 1.1:-68971621 | None:intergenic |
| GCTGTTAAGGATCTCAAGCG+TGG | 0.622485 | 1.1:+68972245 | MS.gene041769:CDS |
| TTCAGTTGTCAGTCCAGTAG+GGG | 0.622733 | 1.1:-68972141 | None:intergenic |
| CAAGGGTCCAACTCTTCTTG+AGG | 0.623175 | 1.1:+68971968 | MS.gene041769:CDS |
| AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 1.1:-68972346 | None:intergenic |
| GACAACTGAAGTCAAGTCTG+TGG | 0.624055 | 1.1:+68972154 | MS.gene041769:CDS |
| AGACATCCTGTAGTGGTAGT+CGG | 0.624076 | 1.1:-68972037 | None:intergenic |
| ACAGCAAAACGGCCGAGTGG+AGG | 0.624787 | 1.1:-68972554 | None:intergenic |
| TTGACAAGCGTGTCATCGAG+AGG | 0.625348 | 1.1:+68971308 | MS.gene041769:CDS |
| TGGTGTCATAAAACCTGGAA+TGG | 0.625384 | 1.1:+68972106 | MS.gene041769:CDS |
| GTTCAGCCTTGAGCTTGTCA+AGG | 0.628494 | 1.1:-68971384 | None:intergenic |
| GTATGTTGCCTCAAACTCCA+AGG | 0.633897 | 1.1:+68972268 | MS.gene041769:CDS |
| CATCCTGTAGTGGTAGTCGG+AGG | 0.640179 | 1.1:-68972034 | None:intergenic |
| CAGCAAACTTGACAGCAATG+TGG | 0.640811 | 1.1:-68972397 | None:intergenic |
| AGAGAAAGTCTCAACCACCA+TGG | 0.641605 | 1.1:-68972525 | None:intergenic |
| TTCTGGTAAGGAGATTGAGA+AGG | 0.643722 | 1.1:+68972445 | MS.gene041769:CDS |
| GAATTGGAACTGTGCCTGTG+GGG | 0.644316 | 1.1:+68972072 | MS.gene041769:CDS |
| AGTGGAATCAATGATGAGAA+CGG | 0.644693 | 1.1:-68971542 | None:intergenic |
| TGACAGCAATGTGGGAGGTG+TGG | 0.650950 | 1.1:-68972388 | None:intergenic |
| TTAAATCCCACATTGTCACC+AGG | 0.657091 | 1.1:-68972209 | None:intergenic |
| ATCTTGTAGACATCCTGTAG+TGG | 0.657887 | 1.1:-68972044 | None:intergenic |
| AATGATCTGCTGTTGCAACA+AGG | 0.659392 | 1.1:+68971648 | MS.gene041769:CDS |
| AATGAAATCCCTGTGTCCGG+GGG | 0.661737 | 1.1:-68971482 | None:intergenic |
| GAGAAGAAGGATCCCAGTGG+AGG | 0.667988 | 1.1:+68972623 | MS.gene041769:CDS |
| AAAGGTTCACATCAACATTG+TGG | 0.675059 | 1.1:+68971219 | MS.gene041769:CDS |
| ACTACACCCAAGTACTCCAA+GGG | 0.678033 | 1.1:+68971807 | MS.gene041769:CDS |
| CTTGTAGATCAAGTGACCAG+TGG | 0.682705 | 1.1:-68971275 | None:intergenic |
| TAGAGACATGCGTCAAACTG+TGG | 0.690315 | 1.1:+68972577 | MS.gene041769:CDS |
| CTAACAGCAAAACGGCCGAG+TGG | 0.692072 | 1.1:-68972557 | None:intergenic |
| AAACTTGACAGCAATGTGGG+AGG | 0.695398 | 1.1:-68972393 | None:intergenic |
| GTAGATCAAGTGACCAGTGG+TGG | 0.699002 | 1.1:-68971272 | None:intergenic |
| GTGATCATAATGAATCACCC+TGG | 0.699056 | 1.1:+68972329 | MS.gene041769:CDS |
| GATTCCCACCAAGCCCATGG+TGG | 0.723849 | 1.1:+68972511 | MS.gene041769:CDS |
| GTGGAGAAGAAGGATCCCAG+TGG | 0.734762 | 1.1:+68972620 | MS.gene041769:CDS |
| GCATCATGAAGCTCTCACAG+AGG | 0.758446 | 1.1:+68972181 | MS.gene041769:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATATACAACTTCAA+GGG | - | chr1.1:68971691-68971710 | None:intergenic | 15.0% |
| !! | TAATAAAATATACAACTTCA+AGG | - | chr1.1:68971692-68971711 | None:intergenic | 15.0% |
| !! | ATAAAATATACAACTTCAAG+GGG | - | chr1.1:68971690-68971709 | None:intergenic | 20.0% |
| ! | TAGATATGATGAAATTGTGA+AGG | + | chr1.1:68971830-68971849 | MS.gene041769:CDS | 25.0% |
| !!! | AACTTGTTACTAAGATTGAT+AGG | + | chr1.1:68972420-68972439 | MS.gene041769:CDS | 25.0% |
| AATTTCATCATATCTACCCT+TGG | - | chr1.1:68971826-68971845 | None:intergenic | 30.0% | |
| AGTTTCATCCTATTTGAAGA+AGG | + | chr1.1:68971854-68971873 | MS.gene041769:CDS | 30.0% | |
| ATCACCATTCTTCAAGAATT+TGG | - | chr1.1:68972474-68972493 | None:intergenic | 30.0% | |
| TCACCATTCTTCAAGAATTT+GGG | - | chr1.1:68972473-68972492 | None:intergenic | 30.0% | |
| TTCATTAAGAACATGATCAC+CGG | + | chr1.1:68971499-68971518 | MS.gene041769:CDS | 30.0% | |
| ! | GAACAAATGGAATTTTGTCT+GGG | - | chr1.1:68971890-68971909 | None:intergenic | 30.0% |
| AAAGGTTCACATCAACATTG+TGG | + | chr1.1:68971219-68971238 | MS.gene041769:CDS | 35.0% | |
| AGTGGAATCAATGATGAGAA+CGG | - | chr1.1:68971545-68971564 | None:intergenic | 35.0% | |
| ATAGCCAACCTTCTTCAAAT+AGG | - | chr1.1:68971865-68971884 | None:intergenic | 35.0% | |
| ATCCATCTGTTCAAGATAGA+TGG | - | chr1.1:68971784-68971803 | None:intergenic | 35.0% | |
| GATCACTTGAGATGTAAAGT+TGG | - | chr1.1:68972315-68972334 | None:intergenic | 35.0% | |
| TCATCCTATTTGAAGAAGGT+TGG | + | chr1.1:68971858-68971877 | MS.gene041769:CDS | 35.0% | |
| ! | GGAACAAATGGAATTTTGTC+TGG | - | chr1.1:68971891-68971910 | None:intergenic | 35.0% |
| ! | TGTCAAGAATGTTGCTGTTA+AGG | + | chr1.1:68972232-68972251 | MS.gene041769:CDS | 35.0% |
| !!! | TTTTGAAGCCGGTATTTCTA+AGG | + | chr1.1:68971573-68971592 | MS.gene041769:CDS | 35.0% |
| AAACCAGAGATGGGAACAAA+TGG | - | chr1.1:68971903-68971922 | None:intergenic | 40.0% | |
| AATGACAGTGCAGTAGTACT+TGG | - | chr1.1:68971458-68971477 | None:intergenic | 40.0% | |
| AATGATCTGCTGTTGCAACA+AGG | + | chr1.1:68971648-68971667 | MS.gene041769:CDS | 40.0% | |
| ACAAACCTTGACTGGTACAA+GGG | + | chr1.1:68971951-68971970 | MS.gene041769:CDS | 40.0% | |
| ACCAAATCAATGAGCCTAAG+AGG | + | chr1.1:68971997-68972016 | MS.gene041769:CDS | 40.0% | |
| ACTAAGATTGATAGGCGTTC+TGG | + | chr1.1:68972428-68972447 | MS.gene041769:CDS | 40.0% | |
| AGCAAACTTGACAGCAATGT+GGG | - | chr1.1:68972399-68972418 | None:intergenic | 40.0% | |
| ATCTTGTAGACATCCTGTAG+TGG | - | chr1.1:68972047-68972066 | None:intergenic | 40.0% | |
| ATTCCATTTGTTCCCATCTC+TGG | + | chr1.1:68971897-68971916 | MS.gene041769:CDS | 40.0% | |
| CACATCAACATTGTGGTCAT+TGG | + | chr1.1:68971226-68971245 | MS.gene041769:CDS | 40.0% | |
| CTACAGGATGTCTACAAGAT+TGG | + | chr1.1:68972047-68972066 | MS.gene041769:CDS | 40.0% | |
| CTGACCATCCTTAGAAATAC+CGG | - | chr1.1:68971584-68971603 | None:intergenic | 40.0% | |
| CTTAATGAAATCCCTGTGTC+CGG | - | chr1.1:68971488-68971507 | None:intergenic | 40.0% | |
| GAGCCCAAATTCTTGAAGAA+TGG | + | chr1.1:68972467-68972486 | MS.gene041769:CDS | 40.0% | |
| GCATGTCTCTAACAGCAAAA+CGG | - | chr1.1:68972568-68972587 | None:intergenic | 40.0% | |
| GTCTACAAGATTGGAGGAAT+TGG | + | chr1.1:68972056-68972075 | MS.gene041769:CDS | 40.0% | |
| GTGATCATAATGAATCACCC+TGG | + | chr1.1:68972329-68972348 | MS.gene041769:CDS | 40.0% | |
| TACAAACCTTGACTGGTACA+AGG | + | chr1.1:68971950-68971969 | MS.gene041769:CDS | 40.0% | |
| TGCCATCTATCTTGAACAGA+TGG | + | chr1.1:68971779-68971798 | MS.gene041769:intron | 40.0% | |
| TGTAAAGTTGGCAGATTCCT+TGG | - | chr1.1:68972303-68972322 | None:intergenic | 40.0% | |
| TTAAATCCCACATTGTCACC+AGG | - | chr1.1:68972212-68972231 | None:intergenic | 40.0% | |
| TTAATGAAATCCCTGTGTCC+GGG | - | chr1.1:68971487-68971506 | None:intergenic | 40.0% | |
| TTCTCTGAATATCCTCCACT+CGG | + | chr1.1:68972542-68972561 | MS.gene041769:CDS | 40.0% | |
| TTCTGGTAAGGAGATTGAGA+AGG | + | chr1.1:68972445-68972464 | MS.gene041769:CDS | 40.0% | |
| ! | ATATCTACCCTTGGAGTACT+TGG | - | chr1.1:68971817-68971836 | None:intergenic | 40.0% |
| ! | CTTCTTCTTCAATGCTGACT+TGG | - | chr1.1:68972660-68972679 | None:intergenic | 40.0% |
| ! | TATCTACCCTTGGAGTACTT+GGG | - | chr1.1:68971816-68971835 | None:intergenic | 40.0% |
| ! | TTCTTGAAGAATGGTGATGC+TGG | + | chr1.1:68972476-68972495 | MS.gene041769:CDS | 40.0% |
| !! | AGGCTCATTGATTTGGTCAA+GGG | - | chr1.1:68971994-68972013 | None:intergenic | 40.0% |
| !! | ATCATTGATTCCACTACTGG+TGG | + | chr1.1:68971550-68971569 | MS.gene041769:CDS | 40.0% |
| !! | CTCATCATTGATTCCACTAC+TGG | + | chr1.1:68971547-68971566 | MS.gene041769:CDS | 40.0% |
| !! | TAGGCTCATTGATTTGGTCA+AGG | - | chr1.1:68971995-68972014 | None:intergenic | 40.0% |
| !! | TGGTGTCATAAAACCTGGAA+TGG | + | chr1.1:68972106-68972125 | MS.gene041769:CDS | 40.0% |
| AAACTTGACAGCAATGTGGG+AGG | - | chr1.1:68972396-68972415 | None:intergenic | 45.0% | |
| ACTACACCCAAGTACTCCAA+GGG | + | chr1.1:68971807-68971826 | MS.gene041769:CDS | 45.0% | |
| ACTTCAGTTGTCAGTCCAGT+AGG | - | chr1.1:68972146-68972165 | None:intergenic | 45.0% | |
| AGACATCCTGTAGTGGTAGT+CGG | - | chr1.1:68972040-68972059 | None:intergenic | 45.0% | |
| AGAGAAAGTCTCAACCACCA+TGG | - | chr1.1:68972528-68972547 | None:intergenic | 45.0% | |
| AGCGTTCATTCAAGTATGCC+TGG | + | chr1.1:68971359-68971378 | MS.gene041769:CDS | 45.0% | |
| ATCTCCCTCAAAACCAGAGA+TGG | - | chr1.1:68971913-68971932 | None:intergenic | 45.0% | |
| CACTTGATCTACAAGCTTGG+AGG | + | chr1.1:68971283-68971302 | MS.gene041769:CDS | 45.0% | |
| CAGCAAACTTGACAGCAATG+TGG | - | chr1.1:68972400-68972419 | None:intergenic | 45.0% | |
| CAGGATGTCTACAAGATTGG+AGG | + | chr1.1:68972050-68972069 | MS.gene041769:CDS | 45.0% | |
| CTGTTAAGGATCTCAAGCGT+GGG | + | chr1.1:68972246-68972265 | MS.gene041769:CDS | 45.0% | |
| CTTCAGTTGTCAGTCCAGTA+GGG | - | chr1.1:68972145-68972164 | None:intergenic | 45.0% | |
| CTTCCAGAGAGCAATGTCAA+TGG | - | chr1.1:68971425-68971444 | None:intergenic | 45.0% | |
| CTTGTAGATCAAGTGACCAG+TGG | - | chr1.1:68971278-68971297 | None:intergenic | 45.0% | |
| GACAACTGAAGTCAAGTCTG+TGG | + | chr1.1:68972154-68972173 | MS.gene041769:CDS | 45.0% | |
| GAGAAAGTCTCAACCACCAT+GGG | - | chr1.1:68972527-68972546 | None:intergenic | 45.0% | |
| GAGCATAGCCATTTCCAATC+TGG | - | chr1.1:68972355-68972374 | None:intergenic | 45.0% | |
| GATTGATAGGCGTTCTGGTA+AGG | + | chr1.1:68972433-68972452 | MS.gene041769:CDS | 45.0% | |
| GCAAAAGTGACAACCATTCC+AGG | - | chr1.1:68972122-68972141 | None:intergenic | 45.0% | |
| GCGTTCATTCAAGTATGCCT+GGG | + | chr1.1:68971360-68971379 | MS.gene041769:CDS | 45.0% | |
| GGTCACTTGATCTACAAGCT+TGG | + | chr1.1:68971280-68971299 | MS.gene041769:CDS | 45.0% | |
| GTATGTTGCCTCAAACTCCA+AGG | + | chr1.1:68972268-68972287 | MS.gene041769:CDS | 45.0% | |
| TAATGAAATCCCTGTGTCCG+GGG | - | chr1.1:68971486-68971505 | None:intergenic | 45.0% | |
| TACTACACCCAAGTACTCCA+AGG | + | chr1.1:68971806-68971825 | MS.gene041769:CDS | 45.0% | |
| TAGAGACATGCGTCAAACTG+TGG | + | chr1.1:68972577-68972596 | MS.gene041769:CDS | 45.0% | |
| TCACACCAAGAGTGAAAGCA+AGG | - | chr1.1:68971624-68971643 | None:intergenic | 45.0% | |
| TCACCATTGACATTGCTCTC+TGG | + | chr1.1:68971419-68971438 | MS.gene041769:CDS | 45.0% | |
| TCTCCCTCAAAACCAGAGAT+GGG | - | chr1.1:68971912-68971931 | None:intergenic | 45.0% | |
| TTCAGTTGTCAGTCCAGTAG+GGG | - | chr1.1:68972144-68972163 | None:intergenic | 45.0% | |
| TTGATTTCCCAGAGTCGACA+TGG | - | chr1.1:68971252-68971271 | None:intergenic | 45.0% | |
| ! | AAGCAAGGAGAGCATGTTCA+CGG | - | chr1.1:68971609-68971628 | None:intergenic | 45.0% |
| ! | GAAGCCGGTATTTCTAAGGA+TGG | + | chr1.1:68971577-68971596 | MS.gene041769:CDS | 45.0% |
| ! | GCCTCTTAGGCTCATTGATT+TGG | - | chr1.1:68972001-68972020 | None:intergenic | 45.0% |
| !! | GAGACTGGTGTCATAAAACC+TGG | + | chr1.1:68972101-68972120 | MS.gene041769:CDS | 45.0% |
| !!! | ACTACTGGTGGTTTTGAAGC+CGG | + | chr1.1:68971562-68971581 | MS.gene041769:CDS | 45.0% |
| !!! | GTTCCCATCTCTGGTTTTGA+GGG | + | chr1.1:68971906-68971925 | MS.gene041769:CDS | 45.0% |
| !!! | TGTTCCCATCTCTGGTTTTG+AGG | + | chr1.1:68971905-68971924 | MS.gene041769:CDS | 45.0% |
| AAGTTGGCAGATTCCTTGGC+TGG | - | chr1.1:68972299-68972318 | None:intergenic | 50.0% | |
| AATGAAATCCCTGTGTCCGG+GGG | - | chr1.1:68971485-68971504 | None:intergenic | 50.0% | |
| ACAGTCAGCTTGGGATGTTC+CGG | - | chr1.1:68971521-68971540 | None:intergenic | 50.0% | |
| AGCCATTTCCAATCTGGCCA+GGG | - | chr1.1:68972349-68972368 | None:intergenic | 50.0% | |
| AGCGCTCTACAAACCTTGAC+TGG | + | chr1.1:68971943-68971962 | MS.gene041769:CDS | 50.0% | |
| AGGAATTGGAACTGTGCCTG+TGG | + | chr1.1:68972070-68972089 | MS.gene041769:CDS | 50.0% | |
| AGTTGGCAGATTCCTTGGCT+GGG | - | chr1.1:68972298-68972317 | None:intergenic | 50.0% | |
| ATCCCACATTGTCACCAGGA+AGG | - | chr1.1:68972208-68972227 | None:intergenic | 50.0% | |
| ATCCTGTAGTGGTAGTCGGA+GGG | - | chr1.1:68972036-68972055 | None:intergenic | 50.0% | |
| ATGAATCACCCTGGCCAGAT+TGG | + | chr1.1:68972338-68972357 | MS.gene041769:CDS | 50.0% | |
| ATGCGTCAAACTGTGGCTGT+TGG | + | chr1.1:68972584-68972603 | MS.gene041769:CDS | 50.0% | |
| CAAGGGTCCAACTCTTCTTG+AGG | + | chr1.1:68971968-68971987 | MS.gene041769:CDS | 50.0% | |
| CATCAAGGCTGTGGAGAAGA+AGG | + | chr1.1:68972610-68972629 | MS.gene041769:CDS | 50.0% | |
| CTCAAGGCTGAACGTGAAAG+AGG | + | chr1.1:68971394-68971413 | MS.gene041769:CDS | 50.0% | |
| GAATTGGAACTGTGCCTGTG+GGG | + | chr1.1:68972072-68972091 | MS.gene041769:CDS | 50.0% | |
| GCATCATGAAGCTCTCACAG+AGG | + | chr1.1:68972181-68972200 | MS.gene041769:CDS | 50.0% | |
| GCTCTCCTTGCTTTCACTCT+TGG | + | chr1.1:68971616-68971635 | MS.gene041769:CDS | 50.0% | |
| GCTGTTAAGGATCTCAAGCG+TGG | + | chr1.1:68972245-68972264 | MS.gene041769:CDS | 50.0% | |
| GGAATTGGAACTGTGCCTGT+GGG | + | chr1.1:68972071-68972090 | MS.gene041769:CDS | 50.0% | |
| GGCTTCAAAACCACCAGTAG+TGG | - | chr1.1:68971563-68971582 | None:intergenic | 50.0% | |
| GTAGATCAAGTGACCAGTGG+TGG | - | chr1.1:68971275-68971294 | None:intergenic | 50.0% | |
| GTCTGCTTAAGTCCTCCACT+GGG | - | chr1.1:68972638-68972657 | None:intergenic | 50.0% | |
| GTTCAGCCTTGAGCTTGTCA+AGG | - | chr1.1:68971387-68971406 | None:intergenic | 50.0% | |
| TAGCCATTTCCAATCTGGCC+AGG | - | chr1.1:68972350-68972369 | None:intergenic | 50.0% | |
| TCAAGGGCCTCAAGAAGAGT+TGG | - | chr1.1:68971978-68971997 | None:intergenic | 50.0% | |
| TCCCACATTGTCACCAGGAA+GGG | - | chr1.1:68972207-68972226 | None:intergenic | 50.0% | |
| TCTGGGAAATCAACCACCAC+TGG | + | chr1.1:68971259-68971278 | MS.gene041769:CDS | 50.0% | |
| TGCGTCAAACTGTGGCTGTT+GGG | + | chr1.1:68972585-68972604 | MS.gene041769:CDS | 50.0% | |
| TGGGTCATCCTTGGAGTTTG+AGG | - | chr1.1:68972279-68972298 | None:intergenic | 50.0% | |
| TTGACAAGCGTGTCATCGAG+AGG | + | chr1.1:68971308-68971327 | MS.gene041769:CDS | 50.0% | |
| TTGGACCCTTGTACCAGTCA+AGG | - | chr1.1:68971959-68971978 | None:intergenic | 50.0% | |
| ! | AGCAAGGAGAGCATGTTCAC+GGG | - | chr1.1:68971608-68971627 | None:intergenic | 50.0% |
| !! | TCATTGGCCATGTCGACTCT+GGG | + | chr1.1:68971242-68971261 | MS.gene041769:CDS | 50.0% |
| !!! | GTTGTCACTTTTGCCCCTAC+TGG | + | chr1.1:68972128-68972147 | MS.gene041769:CDS | 50.0% |
| AGTCTCAACCACCATGGGCT+TGG | - | chr1.1:68972522-68972541 | None:intergenic | 55.0% | |
| CACCCTGGCCAGATTGGAAA+TGG | + | chr1.1:68972344-68972363 | MS.gene041769:CDS | 55.0% | |
| CATCCTGTAGTGGTAGTCGG+AGG | - | chr1.1:68972037-68972056 | None:intergenic | 55.0% | |
| CTAACAGCAAAACGGCCGAG+TGG | - | chr1.1:68972560-68972579 | None:intergenic | 55.0% | |
| CTGGGTCCTTGACAAGCTCA+AGG | + | chr1.1:68971378-68971397 | MS.gene041769:CDS | 55.0% | |
| CTTGAGCTTGTCAAGGACCC+AGG | - | chr1.1:68971380-68971399 | None:intergenic | 55.0% | |
| GAGAACGGCACAGTCAGCTT+GGG | - | chr1.1:68971530-68971549 | None:intergenic | 55.0% | |
| GAGAAGAAGGATCCCAGTGG+AGG | + | chr1.1:68972623-68972642 | MS.gene041769:CDS | 55.0% | |
| GAGGTGTGGCAGTCAAGAAC+AGG | - | chr1.1:68972377-68972396 | None:intergenic | 55.0% | |
| GATGATTCCCACCAAGCCCA+TGG | + | chr1.1:68972508-68972527 | MS.gene041769:CDS | 55.0% | |
| GCCCTTCCTGGTGACAATGT+GGG | + | chr1.1:68972203-68972222 | MS.gene041769:CDS | 55.0% | |
| GCGTCAAACTGTGGCTGTTG+GGG | + | chr1.1:68972586-68972605 | MS.gene041769:CDS | 55.0% | |
| GGCTTGTCTGAAGGCCTCTT+AGG | - | chr1.1:68972014-68972033 | None:intergenic | 55.0% | |
| GGTCTGCTTAAGTCCTCCAC+TGG | - | chr1.1:68972639-68972658 | None:intergenic | 55.0% | |
| GTGGAGAAGAAGGATCCCAG+TGG | + | chr1.1:68972620-68972639 | MS.gene041769:CDS | 55.0% | |
| TCCTGTAGTGGTAGTCGGAG+GGG | - | chr1.1:68972035-68972054 | None:intergenic | 55.0% | |
| TGACAGCAATGTGGGAGGTG+TGG | - | chr1.1:68972391-68972410 | None:intergenic | 55.0% | |
| TGAGAACGGCACAGTCAGCT+TGG | - | chr1.1:68971531-68971550 | None:intergenic | 55.0% | |
| TGCACTGTCATTGATGCCCC+CGG | + | chr1.1:68971466-68971485 | MS.gene041769:CDS | 55.0% | |
| TGTGGCTGTTGGGGTCATCA+AGG | + | chr1.1:68972595-68972614 | MS.gene041769:CDS | 55.0% | |
| TGTTGGGGTCATCAAGGCTG+TGG | + | chr1.1:68972601-68972620 | MS.gene041769:CDS | 55.0% | |
| TTCCTTGGCTGGGTCATCCT+TGG | - | chr1.1:68972288-68972307 | None:intergenic | 55.0% | |
| ! | TCAACCACCATGGGCTTGGT+GGG | - | chr1.1:68972518-68972537 | None:intergenic | 55.0% |
| !! | GTCATTGGCCATGTCGACTC+TGG | + | chr1.1:68971241-68971260 | MS.gene041769:CDS | 55.0% |
| ACAGCAAAACGGCCGAGTGG+AGG | - | chr1.1:68972557-68972576 | None:intergenic | 60.0% | |
| AGTCGGAGGGGCTTGTCTGA+AGG | - | chr1.1:68972023-68972042 | None:intergenic | 60.0% | |
| CATTGATGCCCCCGGACACA+GGG | + | chr1.1:68971474-68971493 | MS.gene041769:CDS | 60.0% | |
| CTCAACCACCATGGGCTTGG+TGG | - | chr1.1:68972519-68972538 | None:intergenic | 60.0% | |
| CTCCAAGGATGACCCAGCCA+AGG | + | chr1.1:68972283-68972302 | MS.gene041769:CDS | 60.0% | |
| GATTCCCACCAAGCCCATGG+TGG | + | chr1.1:68972511-68972530 | MS.gene041769:CDS | 60.0% | |
| GGCCCTTCCTGGTGACAATG+TGG | + | chr1.1:68972202-68972221 | MS.gene041769:CDS | 60.0% | |
| TCATTGATGCCCCCGGACAC+AGG | + | chr1.1:68971473-68971492 | MS.gene041769:CDS | 60.0% | |
| GCCCCTCCGACTACCACTAC+AGG | + | chr1.1:68972031-68972050 | MS.gene041769:CDS | 65.0% | |
| GCTCTCACAGAGGCCCTTCC+TGG | + | chr1.1:68972191-68972210 | MS.gene041769:CDS | 65.0% | |
| CCAGTCTCGACACGCCCCAC+AGG | - | chr1.1:68972089-68972108 | None:intergenic | 70.0% | |
| CCTGTGGGGCGTGTCGAGAC+TGG | + | chr1.1:68972086-68972105 | MS.gene041769:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 68971208 | 68972682 | 68971208 | ID=MS.gene041769 |
| chr1.1 | mRNA | 68971208 | 68972682 | 68971208 | ID=MS.gene041769.t1;Parent=MS.gene041769 |
| chr1.1 | exon | 68971208 | 68971669 | 68971208 | ID=MS.gene041769.t1.exon1;Parent=MS.gene041769.t1 |
| chr1.1 | CDS | 68971208 | 68971669 | 68971208 | ID=cds.MS.gene041769.t1;Parent=MS.gene041769.t1 |
| chr1.1 | exon | 68971798 | 68972682 | 68971798 | ID=MS.gene041769.t1.exon2;Parent=MS.gene041769.t1 |
| chr1.1 | CDS | 68971798 | 68972682 | 68971798 | ID=cds.MS.gene041769.t1;Parent=MS.gene041769.t1 |
| Gene Sequence |
| Protein sequence |