Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041771.t1 | XP_003591959.2 | 100 | 448 | 0 | 0 | 1 | 448 | 1 | 448 | 5.40E-260 | 906.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041771.t1 | O24534 | 95.8 | 448 | 18 | 1 | 1 | 448 | 1 | 447 | 3.2e-253 | 875.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041771.t1 | G7I9L3 | 100.0 | 448 | 0 | 0 | 1 | 448 | 1 | 448 | 3.9e-260 | 906.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041771.t1 | MTR_1g495705 | 100.000 | 448 | 0 | 0 | 1 | 448 | 1 | 448 | 0.0 | 922 |
| MS.gene041771.t1 | MTR_1g095650 | 100.000 | 448 | 0 | 0 | 1 | 448 | 1 | 448 | 0.0 | 922 |
| MS.gene041771.t1 | MTR_1g095703 | 99.777 | 448 | 1 | 0 | 1 | 448 | 1 | 448 | 0.0 | 921 |
| MS.gene041771.t1 | MTR_6g021800 | 96.652 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 0.0 | 895 |
| MS.gene041771.t1 | MTR_6g021805 | 96.652 | 448 | 14 | 1 | 1 | 448 | 1 | 447 | 0.0 | 895 |
| MS.gene041771.t1 | MTR_4g014810 | 96.429 | 448 | 15 | 1 | 1 | 448 | 1 | 447 | 0.0 | 890 |
| MS.gene041771.t1 | MTR_1g013680 | 95.787 | 451 | 16 | 1 | 1 | 448 | 1 | 451 | 0.0 | 882 |
| MS.gene041771.t1 | MTR_1g085410 | 82.719 | 434 | 75 | 0 | 1 | 434 | 1 | 434 | 0.0 | 744 |
| MS.gene041771.t1 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 736 |
| MS.gene041771.t1 | MTR_1g101870 | 82.151 | 437 | 73 | 3 | 1 | 437 | 1 | 432 | 0.0 | 734 |
| MS.gene041771.t1 | MTR_1g024175 | 79.263 | 434 | 90 | 0 | 1 | 434 | 1 | 434 | 0.0 | 728 |
| MS.gene041771.t1 | MTR_8g014590 | 79.955 | 449 | 88 | 1 | 1 | 447 | 1 | 449 | 0.0 | 723 |
| MS.gene041771.t1 | MTR_1g095650 | 100.000 | 347 | 0 | 0 | 102 | 448 | 1 | 347 | 0.0 | 713 |
| MS.gene041771.t1 | MTR_2g082730 | 71.365 | 447 | 110 | 3 | 1 | 445 | 1 | 431 | 0.0 | 645 |
| MS.gene041771.t1 | MTR_5g037350 | 67.872 | 470 | 114 | 1 | 3 | 435 | 13 | 482 | 0.0 | 635 |
| MS.gene041771.t1 | MTR_1g089520 | 71.395 | 430 | 105 | 3 | 4 | 432 | 5 | 417 | 0.0 | 628 |
| MS.gene041771.t1 | MTR_2g082665 | 66.443 | 447 | 106 | 3 | 1 | 445 | 1 | 405 | 0.0 | 588 |
| MS.gene041771.t1 | MTR_2g037420 | 65.820 | 433 | 105 | 3 | 1 | 431 | 1 | 392 | 0.0 | 562 |
| MS.gene041771.t1 | MTR_8g013910 | 63.920 | 449 | 127 | 5 | 1 | 433 | 1 | 430 | 0.0 | 551 |
| MS.gene041771.t1 | MTR_2g080210 | 64.828 | 435 | 117 | 4 | 1 | 432 | 1 | 402 | 0.0 | 551 |
| MS.gene041771.t1 | MTR_8g008740 | 78.462 | 325 | 69 | 1 | 1 | 324 | 1 | 325 | 0.0 | 539 |
| MS.gene041771.t1 | MTR_1g112460 | 66.443 | 298 | 59 | 4 | 155 | 447 | 1 | 262 | 1.63e-127 | 370 |
| MS.gene041771.t1 | MTR_1g495735 | 76.617 | 201 | 37 | 1 | 240 | 430 | 106 | 306 | 1.53e-101 | 305 |
| MS.gene041771.t1 | MTR_1g495735 | 71.698 | 53 | 15 | 0 | 21 | 73 | 2 | 54 | 5.35e-17 | 81.6 |
| MS.gene041771.t1 | MTR_6g080420 | 37.963 | 432 | 254 | 6 | 5 | 428 | 89 | 514 | 4.28e-97 | 301 |
| MS.gene041771.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 49 | 476 | 7.93e-94 | 291 |
| MS.gene041771.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 43 | 470 | 8.28e-94 | 291 |
| MS.gene041771.t1 | MTR_8g106700 | 37.963 | 432 | 258 | 6 | 4 | 429 | 70 | 497 | 2.38e-93 | 291 |
| MS.gene041771.t1 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 275 | 704 | 1.09e-91 | 292 |
| MS.gene041771.t1 | MTR_8g087950 | 36.028 | 433 | 268 | 6 | 7 | 433 | 348 | 777 | 6.45e-91 | 292 |
| MS.gene041771.t1 | MTR_1g101880 | 87.013 | 154 | 20 | 0 | 1 | 154 | 1 | 154 | 8.75e-90 | 274 |
| MS.gene041771.t1 | MTR_4g054970 | 57.025 | 242 | 75 | 4 | 193 | 431 | 50 | 265 | 3.58e-81 | 252 |
| MS.gene041771.t1 | MTR_4g054970 | 75.000 | 44 | 11 | 0 | 1 | 44 | 1 | 44 | 7.88e-13 | 68.9 |
| MS.gene041771.t1 | MTR_1g024165 | 81.429 | 140 | 26 | 0 | 6 | 145 | 10 | 149 | 1.27e-78 | 241 |
| MS.gene041771.t1 | MTR_8g014950 | 76.471 | 102 | 24 | 0 | 3 | 104 | 4 | 105 | 1.51e-47 | 159 |
| MS.gene041771.t1 | MTR_7g094460 | 30.365 | 438 | 245 | 14 | 3 | 429 | 59 | 447 | 1.49e-45 | 164 |
| MS.gene041771.t1 | MTR_7g098190 | 53.892 | 167 | 51 | 5 | 56 | 220 | 10 | 152 | 8.25e-43 | 149 |
| MS.gene041771.t1 | MTR_2g021300 | 29.613 | 439 | 247 | 12 | 3 | 429 | 46 | 434 | 5.10e-42 | 154 |
| MS.gene041771.t1 | MTR_3g076660 | 29.955 | 444 | 250 | 15 | 3 | 429 | 88 | 487 | 8.51e-41 | 152 |
| MS.gene041771.t1 | MTR_8g014960 | 64.634 | 82 | 29 | 0 | 213 | 294 | 2 | 83 | 2.33e-28 | 110 |
| MS.gene041771.t1 | MTR_3g097250 | 26.471 | 272 | 143 | 9 | 9 | 272 | 85 | 307 | 1.44e-12 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene041771.t1 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene041771.t1 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene041771.t1 | AT5G60390 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene041771.t1 | AT1G07920 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene041771.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene041771.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene041771.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene041771.t1 | AT1G07940 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene041771.t1 | AT1G07930 | 95.302 | 447 | 20 | 1 | 1 | 447 | 1 | 446 | 0.0 | 884 |
| MS.gene041771.t1 | AT1G07930 | 98.824 | 255 | 3 | 0 | 1 | 255 | 1 | 255 | 0.0 | 530 |
| MS.gene041771.t1 | AT1G07930 | 87.179 | 117 | 14 | 1 | 331 | 447 | 254 | 369 | 8.85e-65 | 213 |
| MS.gene041771.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.39e-94 | 294 |
| MS.gene041771.t1 | AT1G18070 | 37.647 | 425 | 257 | 5 | 5 | 424 | 99 | 520 | 3.39e-94 | 294 |
| MS.gene041771.t1 | AT1G18070 | 36.927 | 436 | 256 | 6 | 5 | 424 | 99 | 531 | 3.75e-91 | 286 |
| MS.gene041771.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 239 | 660 | 1.05e-90 | 289 |
| MS.gene041771.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.07e-90 | 289 |
| MS.gene041771.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 240 | 661 | 1.07e-90 | 289 |
| MS.gene041771.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 315 | 736 | 6.50e-90 | 289 |
| MS.gene041771.t1 | AT5G10630 | 35.765 | 425 | 265 | 5 | 7 | 426 | 310 | 731 | 7.08e-90 | 288 |
| MS.gene041771.t1 | AT1G35550 | 78.641 | 103 | 22 | 0 | 335 | 437 | 1 | 103 | 1.43e-53 | 174 |
| MS.gene041771.t1 | AT4G02930 | 30.296 | 439 | 245 | 15 | 3 | 429 | 63 | 452 | 8.12e-44 | 159 |
| MS.gene041771.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 9.40e-44 | 160 |
| MS.gene041771.t1 | AT4G20360 | 30.137 | 438 | 257 | 10 | 3 | 429 | 75 | 474 | 9.40e-44 | 160 |
| MS.gene041771.t1 | AT2G31060 | 25.000 | 264 | 160 | 8 | 9 | 263 | 61 | 295 | 3.22e-12 | 68.9 |
| MS.gene041771.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.81e-11 | 66.2 |
| MS.gene041771.t1 | AT5G08650 | 26.667 | 270 | 145 | 10 | 9 | 272 | 88 | 310 | 2.85e-11 | 66.2 |
| MS.gene041771.t1 | AT2G31060 | 24.615 | 260 | 162 | 7 | 9 | 263 | 61 | 291 | 3.79e-11 | 65.9 |
Find 154 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCACCATTCTTCAAGAATT+TGG | 0.066665 | 1.1:+68958154 | None:intergenic |
| CTCCTTCTCAATTTCCTTAC+CGG | 0.285465 | 1.1:+68958178 | None:intergenic |
| GCTCTCCTTGCTTTCACTCT+TGG | 0.289982 | 1.1:-68958978 | MS.gene041771:CDS |
| GTCTACAAGATTGGAGGAAT+TGG | 0.315206 | 1.1:-68958569 | MS.gene041771:CDS |
| GCCTCTTAGGCTCATTGATT+TGG | 0.315866 | 1.1:+68958627 | None:intergenic |
| TGTCAAGAATGTTGCTGTTA+AGG | 0.325240 | 1.1:-68958393 | MS.gene041771:CDS |
| TCACCATTCTTCAAGAATTT+GGG | 0.331757 | 1.1:+68958155 | None:intergenic |
| ATAGCCAACCTTCTTCAAAT+AGG | 0.332380 | 1.1:+68958763 | None:intergenic |
| AAGTTAGCAGCCTCCTTGGC+TGG | 0.333938 | 1.1:+68958329 | None:intergenic |
| CTTCTTCTTCAATGCTGACT+TGG | 0.345006 | 1.1:+68957968 | None:intergenic |
| CACATCAACATTGTGGTCAT+TGG | 0.354316 | 1.1:-68959368 | MS.gene041771:CDS |
| GAGGTGTGGCAGTCAAGAAC+AGG | 0.357372 | 1.1:+68958251 | None:intergenic |
| ATTCCATTTGTTCCCATCTC+TGG | 0.368209 | 1.1:-68958728 | MS.gene041771:CDS |
| GCTCTCACAGAGGCCCTTCC+TGG | 0.369900 | 1.1:-68958434 | MS.gene041771:CDS |
| CTCCTTGGCTGGGTCATCCT+TGG | 0.371873 | 1.1:+68958340 | None:intergenic |
| ATATCTACCCTTGGAGTACT+TGG | 0.380807 | 1.1:+68958811 | None:intergenic |
| TCACCATTGACATTGCTCTT+TGG | 0.386025 | 1.1:-68959175 | MS.gene041771:CDS |
| GTCATTGGCCATGTCGACTC+TGG | 0.395247 | 1.1:-68959353 | MS.gene041771:CDS |
| TGCGTCAAACTGTAGCTGTT+GGG | 0.401918 | 1.1:-68958040 | MS.gene041771:CDS |
| CCTGTGGGGCGTGTTGAAAC+TGG | 0.405151 | 1.1:-68958539 | MS.gene041771:CDS |
| GCAAAAGTGACAACCATTCC+AGG | 0.418006 | 1.1:+68958506 | None:intergenic |
| CTCATCATTGATTCCACTAC+TGG | 0.419293 | 1.1:-68959047 | MS.gene041771:CDS |
| ATGAATCACCCTGGCCAGAT+TGG | 0.425183 | 1.1:-68958287 | MS.gene041771:CDS |
| CTTAATGAAATCCCTGTGTC+CGG | 0.429384 | 1.1:+68959109 | None:intergenic |
| CACCCTGGCCAGATTGGAAA+TGG | 0.432985 | 1.1:-68958281 | MS.gene041771:CDS |
| GCCCCTCCGACTACCACTTC+AGG | 0.433104 | 1.1:-68958594 | MS.gene041771:CDS |
| ACTAAGATTGATAGGCGTTC+CGG | 0.433848 | 1.1:-68958197 | MS.gene041771:CDS |
| TGACAAGCTTAAGGCTGAAC+GGG | 0.436450 | 1.1:-68959207 | MS.gene041771:CDS |
| AGGACTAATGGGTAAGGAAA+AGG | 0.440646 | 1.1:-68959393 | None:intergenic |
| AGCGTTCATTCAAGTATGCC+TGG | 0.444655 | 1.1:-68959235 | MS.gene041771:CDS |
| GGCTTGTCTGAAGGCCTCTT+AGG | 0.446650 | 1.1:+68958614 | None:intergenic |
| GGGCATAGCCATTTCCAATC+TGG | 0.448022 | 1.1:+68958273 | None:intergenic |
| AAACCAGAGATGGGAACAAA+TGG | 0.449170 | 1.1:+68958725 | None:intergenic |
| GGTCTGCTTAAGTCCTCCAC+TGG | 0.451209 | 1.1:+68957989 | None:intergenic |
| ACTTCAGTTGTCAGTCCAGT+AGG | 0.456008 | 1.1:+68958482 | None:intergenic |
| CTTCAGGATGTCTACAAGAT+TGG | 0.458119 | 1.1:-68958578 | MS.gene041771:CDS |
| AGTCTCAACCACCATGGGCT+TGG | 0.462350 | 1.1:+68958106 | None:intergenic |
| ACCAAATCAATGAGCCTAAG+AGG | 0.463105 | 1.1:-68958628 | MS.gene041771:CDS |
| CTGGGTCCTTGACAAGCTTA+AGG | 0.464518 | 1.1:-68959216 | MS.gene041771:CDS |
| TGGGTCATCCTTGGAGTTTG+AGG | 0.465051 | 1.1:+68958349 | None:intergenic |
| CACAAACCTTGACTGGTACA+AGG | 0.466653 | 1.1:-68958675 | MS.gene041771:CDS |
| CTCAACCACCATGGGCTTGG+TGG | 0.468734 | 1.1:+68958109 | None:intergenic |
| TAGGCTCATTGATTTGGTCA+AGG | 0.472707 | 1.1:+68958633 | None:intergenic |
| TTAATGAAATCCCTGTGTCC+GGG | 0.473933 | 1.1:+68959110 | None:intergenic |
| TAGCCATTTCCAATCTGGCC+AGG | 0.474048 | 1.1:+68958278 | None:intergenic |
| AGGCTCATTGATTTGGTCAA+GGG | 0.475242 | 1.1:+68958634 | None:intergenic |
| TGTAAAGTTAGCAGCCTCCT+TGG | 0.477279 | 1.1:+68958325 | None:intergenic |
| AGCTTGTTACTAAGATTGAT+AGG | 0.481965 | 1.1:-68958205 | MS.gene041771:CDS |
| ACAATCAGCTTGGGATGTTC+CGG | 0.483792 | 1.1:+68959076 | None:intergenic |
| TCATCCTATTTGAAGAAGGT+TGG | 0.491235 | 1.1:-68958767 | MS.gene041771:CDS |
| CTTGTACCAGTCAAGGTTTG+TGG | 0.492698 | 1.1:+68958676 | None:intergenic |
| ATCTCCCTCAAAACCAGAGA+TGG | 0.496573 | 1.1:+68958715 | None:intergenic |
| CATCAAGGCTGTGGAGAAGA+AGG | 0.499167 | 1.1:-68958015 | MS.gene041771:CDS |
| CTGACCATCCTTAGAAATAC+CGG | 0.501461 | 1.1:+68959013 | None:intergenic |
| AGTTTCATCCTATTTGAAGA+AGG | 0.501588 | 1.1:-68958771 | MS.gene041771:CDS |
| ATCATTGATTCCACTACTGG+TGG | 0.502099 | 1.1:-68959044 | MS.gene041771:CDS |
| CTTCAGTTGTCAGTCCAGTA+GGG | 0.506099 | 1.1:+68958483 | None:intergenic |
| AATTTCATCATATCTACCCT+TGG | 0.508007 | 1.1:+68958802 | None:intergenic |
| AATGACAGTGCAGTAGTACT+TGG | 0.509426 | 1.1:+68959139 | None:intergenic |
| TGAGAACGGCACAATCAGCT+TGG | 0.516820 | 1.1:+68959066 | None:intergenic |
| AGGAATTGGAACTGTGCCTG+TGG | 0.517140 | 1.1:-68958555 | MS.gene041771:CDS |
| CAGGATGTCTACAAGATTGG+AGG | 0.523217 | 1.1:-68958575 | MS.gene041771:CDS |
| CTTAAGGCTGAACGGGAAAG+AGG | 0.523952 | 1.1:-68959200 | MS.gene041771:CDS |
| GAGCCCAAATTCTTGAAGAA+TGG | 0.528480 | 1.1:-68958158 | MS.gene041771:CDS |
| ATGCGTCAAACTGTAGCTGT+TGG | 0.528651 | 1.1:-68958041 | MS.gene041771:CDS |
| TCCCACATTGTCACCAGGAA+GGG | 0.528721 | 1.1:+68958421 | None:intergenic |
| AGTCGGAGGGGCTTGTCTGA+AGG | 0.529275 | 1.1:+68958605 | None:intergenic |
| GAGAACGGCACAATCAGCTT+GGG | 0.529995 | 1.1:+68959067 | None:intergenic |
| GATTGATAGGCGTTCCGGTA+AGG | 0.530821 | 1.1:-68958192 | MS.gene041771:CDS |
| CTTCCAAAGAGCAATGTCAA+TGG | 0.534369 | 1.1:+68959172 | None:intergenic |
| GGAATTGGAACTGTGCCTGT+GGG | 0.536194 | 1.1:-68958554 | MS.gene041771:CDS |
| AGCAAACTTGACAGCAATGT+GGG | 0.541075 | 1.1:+68958229 | None:intergenic |
| TGTAGCTGTTGGGGTCATCA+AGG | 0.544261 | 1.1:-68958030 | MS.gene041771:CDS |
| TGCACTGTCATTGATGCCCC+CGG | 0.544718 | 1.1:-68959128 | MS.gene041771:CDS |
| CACTTGATCTACAAGCTTGG+AGG | 0.545798 | 1.1:-68959311 | MS.gene041771:CDS |
| GTCTGCTTAAGTCCTCCACT+GGG | 0.549538 | 1.1:+68957990 | None:intergenic |
| GGCTTCAAAACCACCAGTAG+TGG | 0.551737 | 1.1:+68959034 | None:intergenic |
| GGTCACTTGATCTACAAGCT+TGG | 0.555547 | 1.1:-68959314 | MS.gene041771:CDS |
| TCAAGGGCCTCAAGAAGGGT+TGG | 0.557590 | 1.1:+68958650 | None:intergenic |
| TCAACCACCATGGGCTTGGT+GGG | 0.557624 | 1.1:+68958110 | None:intergenic |
| TTGGTCAAGGGCCTCAAGAA+GGG | 0.558003 | 1.1:+68958646 | None:intergenic |
| TTGGACCCTTGTACCAGTCA+AGG | 0.558366 | 1.1:+68958669 | None:intergenic |
| AAGCAAGGAGAGCATGTTCA+CGG | 0.559179 | 1.1:+68958988 | None:intergenic |
| TCATTGGCCATGTCGACTCT+GGG | 0.559180 | 1.1:-68959352 | MS.gene041771:CDS |
| AGGTGTGGCAGTCAAGAACA+GGG | 0.559985 | 1.1:+68958252 | None:intergenic |
| TTTGGTCAAGGGCCTCAAGA+AGG | 0.560467 | 1.1:+68958645 | None:intergenic |
| TTCTTGAAGAATGGTGATGC+TGG | 0.561159 | 1.1:-68958149 | MS.gene041771:CDS |
| AGCGCTCCACAAACCTTGAC+TGG | 0.561686 | 1.1:-68958682 | MS.gene041771:CDS |
| AGTTAGCAGCCTCCTTGGCT+GGG | 0.563218 | 1.1:+68958330 | None:intergenic |
| GAAGCCGGTATTTCTAAGGA+TGG | 0.564413 | 1.1:-68959017 | MS.gene041771:CDS |
| TCTGGGAAATCAACCACCAC+TGG | 0.564990 | 1.1:-68959335 | MS.gene041771:CDS |
| ACAAACCTTGACTGGTACAA+GGG | 0.567625 | 1.1:-68958674 | MS.gene041771:CDS |
| TAATGAAATCCCTGTGTCCG+GGG | 0.570266 | 1.1:+68959111 | None:intergenic |
| TTCATTAAGAACATGATCAC+CGG | 0.572337 | 1.1:-68959095 | MS.gene041771:CDS |
| AGCAAGGAGAGCATGTTCAC+GGG | 0.572470 | 1.1:+68958989 | None:intergenic |
| CTTAAGCTTGTCAAGGACCC+AGG | 0.575518 | 1.1:+68959217 | None:intergenic |
| GAGAAAGTCTCAACCACCAT+GGG | 0.575954 | 1.1:+68958101 | None:intergenic |
| ATCCTGAAGTGGTAGTCGGA+GGG | 0.576252 | 1.1:+68958592 | None:intergenic |
| CCAGTTTCAACACGCCCCAC+AGG | 0.580692 | 1.1:+68958539 | None:intergenic |
| TATCTACCCTTGGAGTACTT+GGG | 0.580849 | 1.1:+68958812 | None:intergenic |
| GCGTCAAACTGTAGCTGTTG+GGG | 0.581681 | 1.1:-68958039 | MS.gene041771:CDS |
| ATCCCACATTGTCACCAGGA+AGG | 0.585536 | 1.1:+68958420 | None:intergenic |
| GGCCCTTCCTGGTGACAATG+TGG | 0.586985 | 1.1:-68958423 | MS.gene041771:CDS |
| TTGATTTCCCAGAGTCGACA+TGG | 0.588973 | 1.1:+68959345 | None:intergenic |
| CTGTTAAGGATCTCAAGCGT+GGG | 0.589274 | 1.1:-68958379 | MS.gene041771:CDS |
| TTCTCTGAATATCCTCCACT+CGG | 0.591172 | 1.1:-68958083 | MS.gene041771:CDS |
| GCCCTTCCTGGTGACAATGT+GGG | 0.592402 | 1.1:-68958422 | MS.gene041771:CDS |
| TTGACAAGCTTAAGGCTGAA+CGG | 0.594016 | 1.1:-68959208 | MS.gene041771:CDS |
| TGTTGGGGTCATCAAGGCTG+TGG | 0.596509 | 1.1:-68958024 | MS.gene041771:CDS |
| TGGTGTCATAAAACCTGGAA+TGG | 0.598505 | 1.1:-68958519 | MS.gene041771:CDS |
| TAGATATGATGAAATTGTGA+AGG | 0.599770 | 1.1:-68958795 | MS.gene041771:CDS |
| GCATGTCTCTAACAGCAAAA+CGG | 0.600985 | 1.1:+68958060 | None:intergenic |
| CTCCAAGGATGACCCAGCCA+AGG | 0.602045 | 1.1:-68958342 | MS.gene041771:CDS |
| GCGTTCATTCAAGTATGCCT+GGG | 0.605879 | 1.1:-68959234 | MS.gene041771:CDS |
| TCTCCCTCAAAACCAGAGAT+GGG | 0.607478 | 1.1:+68958716 | None:intergenic |
| TCCTGAAGTGGTAGTCGGAG+GGG | 0.608492 | 1.1:+68958593 | None:intergenic |
| GATGATTCCCACCAAGCCCA+TGG | 0.611182 | 1.1:-68958117 | MS.gene041771:CDS |
| TACTACACCCAAGTACTCCA+AGG | 0.613862 | 1.1:-68958819 | MS.gene041771:CDS |
| TCGACAAGCGTGTCATCGAG+AGG | 0.617069 | 1.1:-68959286 | MS.gene041771:CDS |
| GTTCAGCCTTAAGCTTGTCA+AGG | 0.618150 | 1.1:+68959210 | None:intergenic |
| CAAGGGTCCAACCCTTCTTG+AGG | 0.620566 | 1.1:-68958657 | MS.gene041771:CDS |
| TCACACCAAGAGTGAAAGCA+AGG | 0.621193 | 1.1:+68958973 | None:intergenic |
| ATCTTGTAGACATCCTGAAG+TGG | 0.621388 | 1.1:+68958581 | None:intergenic |
| GCTGTTAAGGATCTCAAGCG+TGG | 0.622485 | 1.1:-68958380 | MS.gene041771:CDS |
| TTCCGGTAAGGAAATTGAGA+AGG | 0.622677 | 1.1:-68958180 | MS.gene041771:CDS |
| TTCAGTTGTCAGTCCAGTAG+GGG | 0.622733 | 1.1:+68958484 | None:intergenic |
| AGCCATTTCCAATCTGGCCA+GGG | 0.623271 | 1.1:+68958279 | None:intergenic |
| GAAACTGGTGTCATAAAACC+TGG | 0.623591 | 1.1:-68958524 | MS.gene041771:CDS |
| GACAACTGAAGTCAAGTCTG+TGG | 0.624055 | 1.1:-68958471 | MS.gene041771:CDS |
| ACAGCAAAACGGCCGAGTGG+AGG | 0.624787 | 1.1:+68958071 | None:intergenic |
| GTATGTTGCCTCAAACTCCA+AGG | 0.633897 | 1.1:-68958357 | MS.gene041771:CDS |
| CATCCTGAAGTGGTAGTCGG+AGG | 0.637451 | 1.1:+68958591 | None:intergenic |
| AGACATCCTGAAGTGGTAGT+CGG | 0.638051 | 1.1:+68958588 | None:intergenic |
| CAGCAAACTTGACAGCAATG+TGG | 0.638328 | 1.1:+68958228 | None:intergenic |
| AGAGAAAGTCTCAACCACCA+TGG | 0.641605 | 1.1:+68958100 | None:intergenic |
| GAATTGGAACTGTGCCTGTG+GGG | 0.644316 | 1.1:-68958553 | MS.gene041771:CDS |
| AGTGGAATCAATGATGAGAA+CGG | 0.644693 | 1.1:+68959052 | None:intergenic |
| TGACAGCAATGTGGGAGGTG+TGG | 0.650950 | 1.1:+68958237 | None:intergenic |
| TTAAATCCCACATTGTCACC+AGG | 0.657091 | 1.1:+68958416 | None:intergenic |
| AATGATCTGCTGTTGCAACA+AGG | 0.659392 | 1.1:-68958946 | MS.gene041771:intron |
| CAAGGATGACCCAGCCAAGG+AGG | 0.659665 | 1.1:-68958339 | MS.gene041771:CDS |
| AATGAAATCCCTGTGTCCGG+GGG | 0.661737 | 1.1:+68959112 | None:intergenic |
| GAGAAGAAGGATCCCAGTGG+AGG | 0.667988 | 1.1:-68958002 | MS.gene041771:CDS |
| AAAGGTTCACATCAACATTG+TGG | 0.675059 | 1.1:-68959375 | MS.gene041771:CDS |
| ACTACACCCAAGTACTCCAA+GGG | 0.678033 | 1.1:-68958818 | MS.gene041771:CDS |
| CTTGTAGATCAAGTGACCAG+TGG | 0.682705 | 1.1:+68959319 | None:intergenic |
| CTAACAGCAAAACGGCCGAG+TGG | 0.692072 | 1.1:+68958068 | None:intergenic |
| AAACTTGACAGCAATGTGGG+AGG | 0.695398 | 1.1:+68958232 | None:intergenic |
| GTAGATCAAGTGACCAGTGG+TGG | 0.699002 | 1.1:+68959322 | None:intergenic |
| GTGATCATAATGAATCACCC+TGG | 0.699056 | 1.1:-68958296 | MS.gene041771:CDS |
| GGTGTGGCAGTCAAGAACAG+GGG | 0.711459 | 1.1:+68958253 | None:intergenic |
| GATTCCCACCAAGCCCATGG+TGG | 0.723849 | 1.1:-68958114 | MS.gene041771:CDS |
| GTGGAGAAGAAGGATCCCAG+TGG | 0.734762 | 1.1:-68958005 | MS.gene041771:CDS |
| GCATCATGAAGCTCTCACAG+AGG | 0.758446 | 1.1:-68958444 | MS.gene041771:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCTTGAATTCATTTATGTA+TGG | - | chr1.1:68958476-68958495 | MS.gene041771:CDS | 20.0% |
| ! | TAGATATGATGAAATTGTGA+AGG | - | chr1.1:68958556-68958575 | MS.gene041771:CDS | 25.0% |
| AATTTCATCATATCTACCCT+TGG | + | chr1.1:68958552-68958571 | None:intergenic | 30.0% | |
| AGTTTCATCCTATTTGAAGA+AGG | - | chr1.1:68958580-68958599 | MS.gene041771:CDS | 30.0% | |
| ATCACCATTCTTCAAGAATT+TGG | + | chr1.1:68959200-68959219 | None:intergenic | 30.0% | |
| TCACCATTCTTCAAGAATTT+GGG | + | chr1.1:68959199-68959218 | None:intergenic | 30.0% | |
| TTCATTAAGAACATGATCAC+CGG | - | chr1.1:68958256-68958275 | MS.gene041771:CDS | 30.0% | |
| ! | GAACAAATGGAATTTTGTCT+GGG | + | chr1.1:68958616-68958635 | None:intergenic | 30.0% |
| !! | AGCTTGTTACTAAGATTGAT+AGG | - | chr1.1:68959146-68959165 | MS.gene041771:CDS | 30.0% |
| AAAGGTTCACATCAACATTG+TGG | - | chr1.1:68957976-68957995 | MS.gene041771:CDS | 35.0% | |
| AGTGGAATCAATGATGAGAA+CGG | + | chr1.1:68958302-68958321 | None:intergenic | 35.0% | |
| ATAGCCAACCTTCTTCAAAT+AGG | + | chr1.1:68958591-68958610 | None:intergenic | 35.0% | |
| ATCCATCTGTTCAAGATAGA+TGG | + | chr1.1:68958510-68958529 | None:intergenic | 35.0% | |
| TCATCCTATTTGAAGAAGGT+TGG | - | chr1.1:68958584-68958603 | MS.gene041771:CDS | 35.0% | |
| ! | GGAACAAATGGAATTTTGTC+TGG | + | chr1.1:68958617-68958636 | None:intergenic | 35.0% |
| ! | TGTCAAGAATGTTGCTGTTA+AGG | - | chr1.1:68958958-68958977 | MS.gene041771:CDS | 35.0% |
| !!! | TTTTGAAGCCGGTATTTCTA+AGG | - | chr1.1:68958330-68958349 | MS.gene041771:CDS | 35.0% |
| AAACCAGAGATGGGAACAAA+TGG | + | chr1.1:68958629-68958648 | None:intergenic | 40.0% | |
| AATGACAGTGCAGTAGTACT+TGG | + | chr1.1:68958215-68958234 | None:intergenic | 40.0% | |
| AATGATCTGCTGTTGCAACA+AGG | - | chr1.1:68958405-68958424 | MS.gene041771:CDS | 40.0% | |
| ACAAACCTTGACTGGTACAA+GGG | - | chr1.1:68958677-68958696 | MS.gene041771:CDS | 40.0% | |
| ACCAAATCAATGAGCCTAAG+AGG | - | chr1.1:68958723-68958742 | MS.gene041771:CDS | 40.0% | |
| ACTAAGATTGATAGGCGTTC+CGG | - | chr1.1:68959154-68959173 | MS.gene041771:CDS | 40.0% | |
| AGCAAACTTGACAGCAATGT+GGG | + | chr1.1:68959125-68959144 | None:intergenic | 40.0% | |
| ATCTTGTAGACATCCTGAAG+TGG | + | chr1.1:68958773-68958792 | None:intergenic | 40.0% | |
| ATTCCATTTGTTCCCATCTC+TGG | - | chr1.1:68958623-68958642 | MS.gene041771:CDS | 40.0% | |
| CACATCAACATTGTGGTCAT+TGG | - | chr1.1:68957983-68958002 | MS.gene041771:CDS | 40.0% | |
| CTCCTTCTCAATTTCCTTAC+CGG | + | chr1.1:68959176-68959195 | None:intergenic | 40.0% | |
| CTGACCATCCTTAGAAATAC+CGG | + | chr1.1:68958341-68958360 | None:intergenic | 40.0% | |
| CTTAATGAAATCCCTGTGTC+CGG | + | chr1.1:68958245-68958264 | None:intergenic | 40.0% | |
| CTTCAGGATGTCTACAAGAT+TGG | - | chr1.1:68958773-68958792 | MS.gene041771:CDS | 40.0% | |
| CTTCCAAAGAGCAATGTCAA+TGG | + | chr1.1:68958182-68958201 | None:intergenic | 40.0% | |
| GAGCCCAAATTCTTGAAGAA+TGG | - | chr1.1:68959193-68959212 | MS.gene041771:CDS | 40.0% | |
| GCATGTCTCTAACAGCAAAA+CGG | + | chr1.1:68959294-68959313 | None:intergenic | 40.0% | |
| GTCTACAAGATTGGAGGAAT+TGG | - | chr1.1:68958782-68958801 | MS.gene041771:CDS | 40.0% | |
| GTGATCATAATGAATCACCC+TGG | - | chr1.1:68959055-68959074 | MS.gene041771:CDS | 40.0% | |
| TCACCATTGACATTGCTCTT+TGG | - | chr1.1:68958176-68958195 | MS.gene041771:CDS | 40.0% | |
| TGCCATCTATCTTGAACAGA+TGG | - | chr1.1:68958505-68958524 | MS.gene041771:CDS | 40.0% | |
| TTAAATCCCACATTGTCACC+AGG | + | chr1.1:68958938-68958957 | None:intergenic | 40.0% | |
| TTAATGAAATCCCTGTGTCC+GGG | + | chr1.1:68958244-68958263 | None:intergenic | 40.0% | |
| TTCCGGTAAGGAAATTGAGA+AGG | - | chr1.1:68959171-68959190 | MS.gene041771:CDS | 40.0% | |
| TTCTCTGAATATCCTCCACT+CGG | - | chr1.1:68959268-68959287 | MS.gene041771:CDS | 40.0% | |
| TTGACAAGCTTAAGGCTGAA+CGG | - | chr1.1:68958143-68958162 | MS.gene041771:CDS | 40.0% | |
| ! | ATATCTACCCTTGGAGTACT+TGG | + | chr1.1:68958543-68958562 | None:intergenic | 40.0% |
| ! | CTTCTTCTTCAATGCTGACT+TGG | + | chr1.1:68959386-68959405 | None:intergenic | 40.0% |
| ! | TATCTACCCTTGGAGTACTT+GGG | + | chr1.1:68958542-68958561 | None:intergenic | 40.0% |
| ! | TTCTTGAAGAATGGTGATGC+TGG | - | chr1.1:68959202-68959221 | MS.gene041771:CDS | 40.0% |
| !! | AGGCTCATTGATTTGGTCAA+GGG | + | chr1.1:68958720-68958739 | None:intergenic | 40.0% |
| !! | ATCATTGATTCCACTACTGG+TGG | - | chr1.1:68958307-68958326 | MS.gene041771:CDS | 40.0% |
| !! | CTCATCATTGATTCCACTAC+TGG | - | chr1.1:68958304-68958323 | MS.gene041771:CDS | 40.0% |
| !! | GAAACTGGTGTCATAAAACC+TGG | - | chr1.1:68958827-68958846 | MS.gene041771:CDS | 40.0% |
| !! | TAGGCTCATTGATTTGGTCA+AGG | + | chr1.1:68958721-68958740 | None:intergenic | 40.0% |
| !! | TGGTGTCATAAAACCTGGAA+TGG | - | chr1.1:68958832-68958851 | MS.gene041771:intron | 40.0% |
| AAACTTGACAGCAATGTGGG+AGG | + | chr1.1:68959122-68959141 | None:intergenic | 45.0% | |
| ACAATCAGCTTGGGATGTTC+CGG | + | chr1.1:68958278-68958297 | None:intergenic | 45.0% | |
| ACTACACCCAAGTACTCCAA+GGG | - | chr1.1:68958533-68958552 | MS.gene041771:CDS | 45.0% | |
| ACTTCAGTTGTCAGTCCAGT+AGG | + | chr1.1:68958872-68958891 | None:intergenic | 45.0% | |
| AGACATCCTGAAGTGGTAGT+CGG | + | chr1.1:68958766-68958785 | None:intergenic | 45.0% | |
| AGAGAAAGTCTCAACCACCA+TGG | + | chr1.1:68959254-68959273 | None:intergenic | 45.0% | |
| AGCGTTCATTCAAGTATGCC+TGG | - | chr1.1:68958116-68958135 | MS.gene041771:CDS | 45.0% | |
| ATCTCCCTCAAAACCAGAGA+TGG | + | chr1.1:68958639-68958658 | None:intergenic | 45.0% | |
| ATGCGTCAAACTGTAGCTGT+TGG | - | chr1.1:68959310-68959329 | MS.gene041771:CDS | 45.0% | |
| CACAAACCTTGACTGGTACA+AGG | - | chr1.1:68958676-68958695 | MS.gene041771:CDS | 45.0% | |
| CACTTGATCTACAAGCTTGG+AGG | - | chr1.1:68958040-68958059 | MS.gene041771:CDS | 45.0% | |
| CAGCAAACTTGACAGCAATG+TGG | + | chr1.1:68959126-68959145 | None:intergenic | 45.0% | |
| CAGGATGTCTACAAGATTGG+AGG | - | chr1.1:68958776-68958795 | MS.gene041771:CDS | 45.0% | |
| CTGTTAAGGATCTCAAGCGT+GGG | - | chr1.1:68958972-68958991 | MS.gene041771:CDS | 45.0% | |
| CTTCAGTTGTCAGTCCAGTA+GGG | + | chr1.1:68958871-68958890 | None:intergenic | 45.0% | |
| CTTGTACCAGTCAAGGTTTG+TGG | + | chr1.1:68958678-68958697 | None:intergenic | 45.0% | |
| CTTGTAGATCAAGTGACCAG+TGG | + | chr1.1:68958035-68958054 | None:intergenic | 45.0% | |
| GACAACTGAAGTCAAGTCTG+TGG | - | chr1.1:68958880-68958899 | MS.gene041771:intron | 45.0% | |
| GAGAAAGTCTCAACCACCAT+GGG | + | chr1.1:68959253-68959272 | None:intergenic | 45.0% | |
| GCAAAAGTGACAACCATTCC+AGG | + | chr1.1:68958848-68958867 | None:intergenic | 45.0% | |
| GCGTTCATTCAAGTATGCCT+GGG | - | chr1.1:68958117-68958136 | MS.gene041771:CDS | 45.0% | |
| GGTCACTTGATCTACAAGCT+TGG | - | chr1.1:68958037-68958056 | MS.gene041771:CDS | 45.0% | |
| GTATGTTGCCTCAAACTCCA+AGG | - | chr1.1:68958994-68959013 | MS.gene041771:CDS | 45.0% | |
| GTTCAGCCTTAAGCTTGTCA+AGG | + | chr1.1:68958144-68958163 | None:intergenic | 45.0% | |
| TAATGAAATCCCTGTGTCCG+GGG | + | chr1.1:68958243-68958262 | None:intergenic | 45.0% | |
| TACTACACCCAAGTACTCCA+AGG | - | chr1.1:68958532-68958551 | MS.gene041771:CDS | 45.0% | |
| TCACACCAAGAGTGAAAGCA+AGG | + | chr1.1:68958381-68958400 | None:intergenic | 45.0% | |
| TCTCCCTCAAAACCAGAGAT+GGG | + | chr1.1:68958638-68958657 | None:intergenic | 45.0% | |
| TGACAAGCTTAAGGCTGAAC+GGG | - | chr1.1:68958144-68958163 | MS.gene041771:CDS | 45.0% | |
| TGCGTCAAACTGTAGCTGTT+GGG | - | chr1.1:68959311-68959330 | MS.gene041771:CDS | 45.0% | |
| TGTAAAGTTAGCAGCCTCCT+TGG | + | chr1.1:68959029-68959048 | None:intergenic | 45.0% | |
| TTCAGTTGTCAGTCCAGTAG+GGG | + | chr1.1:68958870-68958889 | None:intergenic | 45.0% | |
| TTGATTTCCCAGAGTCGACA+TGG | + | chr1.1:68958009-68958028 | None:intergenic | 45.0% | |
| ! | AAGCAAGGAGAGCATGTTCA+CGG | + | chr1.1:68958366-68958385 | None:intergenic | 45.0% |
| ! | GAAGCCGGTATTTCTAAGGA+TGG | - | chr1.1:68958334-68958353 | MS.gene041771:CDS | 45.0% |
| ! | GCCTCTTAGGCTCATTGATT+TGG | + | chr1.1:68958727-68958746 | None:intergenic | 45.0% |
| !!! | ACTACTGGTGGTTTTGAAGC+CGG | - | chr1.1:68958319-68958338 | MS.gene041771:CDS | 45.0% |
| !!! | GTTCCCATCTCTGGTTTTGA+GGG | - | chr1.1:68958632-68958651 | MS.gene041771:CDS | 45.0% |
| !!! | TGTTCCCATCTCTGGTTTTG+AGG | - | chr1.1:68958631-68958650 | MS.gene041771:CDS | 45.0% |
| AATGAAATCCCTGTGTCCGG+GGG | + | chr1.1:68958242-68958261 | None:intergenic | 50.0% | |
| AGCCATTTCCAATCTGGCCA+GGG | + | chr1.1:68959075-68959094 | None:intergenic | 50.0% | |
| AGGAATTGGAACTGTGCCTG+TGG | - | chr1.1:68958796-68958815 | MS.gene041771:CDS | 50.0% | |
| AGGTGTGGCAGTCAAGAACA+GGG | + | chr1.1:68959102-68959121 | None:intergenic | 50.0% | |
| ATCCCACATTGTCACCAGGA+AGG | + | chr1.1:68958934-68958953 | None:intergenic | 50.0% | |
| ATCCTGAAGTGGTAGTCGGA+GGG | + | chr1.1:68958762-68958781 | None:intergenic | 50.0% | |
| ATGAATCACCCTGGCCAGAT+TGG | - | chr1.1:68959064-68959083 | MS.gene041771:CDS | 50.0% | |
| CATCAAGGCTGTGGAGAAGA+AGG | - | chr1.1:68959336-68959355 | MS.gene041771:CDS | 50.0% | |
| CTGGGTCCTTGACAAGCTTA+AGG | - | chr1.1:68958135-68958154 | MS.gene041771:CDS | 50.0% | |
| CTTAAGCTTGTCAAGGACCC+AGG | + | chr1.1:68958137-68958156 | None:intergenic | 50.0% | |
| CTTAAGGCTGAACGGGAAAG+AGG | - | chr1.1:68958151-68958170 | MS.gene041771:CDS | 50.0% | |
| GAATTGGAACTGTGCCTGTG+GGG | - | chr1.1:68958798-68958817 | MS.gene041771:CDS | 50.0% | |
| GAGAACGGCACAATCAGCTT+GGG | + | chr1.1:68958287-68958306 | None:intergenic | 50.0% | |
| GATTGATAGGCGTTCCGGTA+AGG | - | chr1.1:68959159-68959178 | MS.gene041771:CDS | 50.0% | |
| GCATCATGAAGCTCTCACAG+AGG | - | chr1.1:68958907-68958926 | MS.gene041771:intron | 50.0% | |
| GCGTCAAACTGTAGCTGTTG+GGG | - | chr1.1:68959312-68959331 | MS.gene041771:CDS | 50.0% | |
| GCTCTCCTTGCTTTCACTCT+TGG | - | chr1.1:68958373-68958392 | MS.gene041771:CDS | 50.0% | |
| GCTGTTAAGGATCTCAAGCG+TGG | - | chr1.1:68958971-68958990 | MS.gene041771:CDS | 50.0% | |
| GGAATTGGAACTGTGCCTGT+GGG | - | chr1.1:68958797-68958816 | MS.gene041771:CDS | 50.0% | |
| GGCTTCAAAACCACCAGTAG+TGG | + | chr1.1:68958320-68958339 | None:intergenic | 50.0% | |
| GGGCATAGCCATTTCCAATC+TGG | + | chr1.1:68959081-68959100 | None:intergenic | 50.0% | |
| GTAGATCAAGTGACCAGTGG+TGG | + | chr1.1:68958032-68958051 | None:intergenic | 50.0% | |
| GTCTGCTTAAGTCCTCCACT+GGG | + | chr1.1:68959364-68959383 | None:intergenic | 50.0% | |
| TAGCCATTTCCAATCTGGCC+AGG | + | chr1.1:68959076-68959095 | None:intergenic | 50.0% | |
| TCCCACATTGTCACCAGGAA+GGG | + | chr1.1:68958933-68958952 | None:intergenic | 50.0% | |
| TCTGGGAAATCAACCACCAC+TGG | - | chr1.1:68958016-68958035 | MS.gene041771:CDS | 50.0% | |
| TGAGAACGGCACAATCAGCT+TGG | + | chr1.1:68958288-68958307 | None:intergenic | 50.0% | |
| TGGGTCATCCTTGGAGTTTG+AGG | + | chr1.1:68959005-68959024 | None:intergenic | 50.0% | |
| TGTAGCTGTTGGGGTCATCA+AGG | - | chr1.1:68959321-68959340 | MS.gene041771:CDS | 50.0% | |
| TTGGACCCTTGTACCAGTCA+AGG | + | chr1.1:68958685-68958704 | None:intergenic | 50.0% | |
| TTGGTCAAGGGCCTCAAGAA+GGG | + | chr1.1:68958708-68958727 | None:intergenic | 50.0% | |
| TTTGGTCAAGGGCCTCAAGA+AGG | + | chr1.1:68958709-68958728 | None:intergenic | 50.0% | |
| ! | AGCAAGGAGAGCATGTTCAC+GGG | + | chr1.1:68958365-68958384 | None:intergenic | 50.0% |
| !! | TCATTGGCCATGTCGACTCT+GGG | - | chr1.1:68957999-68958018 | MS.gene041771:CDS | 50.0% |
| !!! | GTTGTCACTTTTGCCCCTAC+TGG | - | chr1.1:68958854-68958873 | MS.gene041771:intron | 50.0% |
| AAGTTAGCAGCCTCCTTGGC+TGG | + | chr1.1:68959025-68959044 | None:intergenic | 55.0% | |
| AGCGCTCCACAAACCTTGAC+TGG | - | chr1.1:68958669-68958688 | MS.gene041771:CDS | 55.0% | |
| AGTCTCAACCACCATGGGCT+TGG | + | chr1.1:68959248-68959267 | None:intergenic | 55.0% | |
| AGTTAGCAGCCTCCTTGGCT+GGG | + | chr1.1:68959024-68959043 | None:intergenic | 55.0% | |
| CAAGGGTCCAACCCTTCTTG+AGG | - | chr1.1:68958694-68958713 | MS.gene041771:CDS | 55.0% | |
| CACCCTGGCCAGATTGGAAA+TGG | - | chr1.1:68959070-68959089 | MS.gene041771:CDS | 55.0% | |
| CATCCTGAAGTGGTAGTCGG+AGG | + | chr1.1:68958763-68958782 | None:intergenic | 55.0% | |
| CTAACAGCAAAACGGCCGAG+TGG | + | chr1.1:68959286-68959305 | None:intergenic | 55.0% | |
| GAGAAGAAGGATCCCAGTGG+AGG | - | chr1.1:68959349-68959368 | MS.gene041771:CDS | 55.0% | |
| GAGGTGTGGCAGTCAAGAAC+AGG | + | chr1.1:68959103-68959122 | None:intergenic | 55.0% | |
| GATGATTCCCACCAAGCCCA+TGG | - | chr1.1:68959234-68959253 | MS.gene041771:CDS | 55.0% | |
| GCCCTTCCTGGTGACAATGT+GGG | - | chr1.1:68958929-68958948 | MS.gene041771:intron | 55.0% | |
| GGCTTGTCTGAAGGCCTCTT+AGG | + | chr1.1:68958740-68958759 | None:intergenic | 55.0% | |
| GGTCTGCTTAAGTCCTCCAC+TGG | + | chr1.1:68959365-68959384 | None:intergenic | 55.0% | |
| GGTGTGGCAGTCAAGAACAG+GGG | + | chr1.1:68959101-68959120 | None:intergenic | 55.0% | |
| GTGGAGAAGAAGGATCCCAG+TGG | - | chr1.1:68959346-68959365 | MS.gene041771:CDS | 55.0% | |
| TCAAGGGCCTCAAGAAGGGT+TGG | + | chr1.1:68958704-68958723 | None:intergenic | 55.0% | |
| TCCTGAAGTGGTAGTCGGAG+GGG | + | chr1.1:68958761-68958780 | None:intergenic | 55.0% | |
| TCGACAAGCGTGTCATCGAG+AGG | - | chr1.1:68958065-68958084 | MS.gene041771:CDS | 55.0% | |
| TGACAGCAATGTGGGAGGTG+TGG | + | chr1.1:68959117-68959136 | None:intergenic | 55.0% | |
| TGCACTGTCATTGATGCCCC+CGG | - | chr1.1:68958223-68958242 | MS.gene041771:CDS | 55.0% | |
| TGTTGGGGTCATCAAGGCTG+TGG | - | chr1.1:68959327-68959346 | MS.gene041771:CDS | 55.0% | |
| ! | TCAACCACCATGGGCTTGGT+GGG | + | chr1.1:68959244-68959263 | None:intergenic | 55.0% |
| !! | GTCATTGGCCATGTCGACTC+TGG | - | chr1.1:68957998-68958017 | MS.gene041771:CDS | 55.0% |
| ACAGCAAAACGGCCGAGTGG+AGG | + | chr1.1:68959283-68959302 | None:intergenic | 60.0% | |
| AGTCGGAGGGGCTTGTCTGA+AGG | + | chr1.1:68958749-68958768 | None:intergenic | 60.0% | |
| CAAGGATGACCCAGCCAAGG+AGG | - | chr1.1:68959012-68959031 | MS.gene041771:CDS | 60.0% | |
| CATTGATGCCCCCGGACACA+GGG | - | chr1.1:68958231-68958250 | MS.gene041771:CDS | 60.0% | |
| CCAGTTTCAACACGCCCCAC+AGG | + | chr1.1:68958815-68958834 | None:intergenic | 60.0% | |
| CCTGTGGGGCGTGTTGAAAC+TGG | - | chr1.1:68958812-68958831 | MS.gene041771:CDS | 60.0% | |
| CTCAACCACCATGGGCTTGG+TGG | + | chr1.1:68959245-68959264 | None:intergenic | 60.0% | |
| CTCCAAGGATGACCCAGCCA+AGG | - | chr1.1:68959009-68959028 | MS.gene041771:CDS | 60.0% | |
| CTCCTTGGCTGGGTCATCCT+TGG | + | chr1.1:68959014-68959033 | None:intergenic | 60.0% | |
| GATTCCCACCAAGCCCATGG+TGG | - | chr1.1:68959237-68959256 | MS.gene041771:CDS | 60.0% | |
| GGCCCTTCCTGGTGACAATG+TGG | - | chr1.1:68958928-68958947 | MS.gene041771:intron | 60.0% | |
| TCATTGATGCCCCCGGACAC+AGG | - | chr1.1:68958230-68958249 | MS.gene041771:CDS | 60.0% | |
| GCCCCTCCGACTACCACTTC+AGG | - | chr1.1:68958757-68958776 | MS.gene041771:CDS | 65.0% | |
| GCTCTCACAGAGGCCCTTCC+TGG | - | chr1.1:68958917-68958936 | MS.gene041771:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 68957965 | 68959408 | 68957965 | ID=MS.gene041771 |
| chr1.1 | mRNA | 68957965 | 68959408 | 68957965 | ID=MS.gene041771.t1;Parent=MS.gene041771 |
| chr1.1 | exon | 68958947 | 68959408 | 68958947 | ID=MS.gene041771.t1.exon1;Parent=MS.gene041771.t1 |
| chr1.1 | CDS | 68958947 | 68959408 | 68958947 | ID=cds.MS.gene041771.t1;Parent=MS.gene041771.t1 |
| chr1.1 | exon | 68957965 | 68958849 | 68957965 | ID=MS.gene041771.t1.exon2;Parent=MS.gene041771.t1 |
| chr1.1 | CDS | 68957965 | 68958849 | 68957965 | ID=cds.MS.gene041771.t1;Parent=MS.gene041771.t1 |
| Gene Sequence |
| Protein sequence |