AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene007373

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007373.t1 MTR_7g103070 98.598 214 3 0 1 214 1 214 2.09e-154 426
MS.gene007373.t1 MTR_1g062760 85.075 201 29 1 13 213 11 210 2.47e-125 353
MS.gene007373.t1 MTR_7g103070 99.363 157 1 0 58 214 2 158 1.31e-112 318
MS.gene007373.t1 MTR_1g090717 70.233 215 60 3 1 214 1 212 1.68e-105 303
MS.gene007373.t1 MTR_1g029450 67.822 202 64 1 13 214 14 214 1.13e-103 298
MS.gene007373.t1 MTR_8g093740 66.355 214 65 4 1 213 1 208 3.94e-103 296
MS.gene007373.t1 MTR_3g096350 68.812 202 59 3 13 213 9 207 2.35e-102 295
MS.gene007373.t1 MTR_8g093740 68.235 170 51 2 45 213 8 175 3.54e-86 252
MS.gene007373.t1 MTR_3g096350 77.236 123 27 1 13 135 9 130 1.20e-67 205
MS.gene007373.t1 MTR_3g096350 74.046 131 31 2 13 141 9 138 2.67e-67 204
MS.gene007373.t1 MTR_7g081700 49.010 202 98 4 13 214 5 201 8.07e-61 189
MS.gene007373.t1 MTR_8g006970 48.756 201 99 3 14 214 20 216 1.07e-58 184
MS.gene007373.t1 MTR_1g068740 48.571 210 96 5 11 213 10 214 3.15e-58 183
MS.gene007373.t1 MTR_1g068730 48.095 210 97 5 11 213 10 214 7.60e-58 182
MS.gene007373.t1 MTR_8g006970 52.299 174 81 2 13 186 5 176 7.90e-57 178
MS.gene007373.t1 MTR_1g115325 47.115 208 98 5 13 213 12 214 1.15e-56 179
MS.gene007373.t1 MTR_2g005500 48.529 204 101 3 10 213 3 202 1.83e-56 178
MS.gene007373.t1 MTR_7g100020 52.941 170 77 3 13 181 12 179 4.35e-54 172
MS.gene007373.t1 MTR_6g021790 50.877 171 78 4 13 181 3 169 2.82e-51 165
MS.gene007373.t1 MTR_4g063160 44.976 209 102 6 13 213 12 215 1.53e-50 163
MS.gene007373.t1 MTR_2g096550 42.365 203 115 2 12 213 11 212 4.33e-50 162
MS.gene007373.t1 MTR_8g031870 48.780 164 82 2 16 179 6 167 4.50e-50 161
MS.gene007373.t1 MTR_8g031660 43.689 206 110 3 13 214 3 206 1.07e-49 161
MS.gene007373.t1 MTR_2g027660 43.868 212 98 6 17 214 7 211 4.74e-49 159
MS.gene007373.t1 MTR_8g031680 46.154 169 89 2 13 181 3 169 2.36e-48 157
MS.gene007373.t1 MTR_4g064897 43.269 208 110 4 13 214 9 214 4.92e-48 157
MS.gene007373.t1 MTR_2g014990 43.192 213 104 4 13 214 10 216 1.41e-47 155
MS.gene007373.t1 MTR_2g075950 43.318 217 114 4 5 214 2 216 1.92e-46 153
MS.gene007373.t1 MTR_4g099470 47.305 167 83 3 48 214 16 177 2.05e-46 151
MS.gene007373.t1 MTR_4g088090 42.254 213 106 4 13 214 10 216 2.16e-46 152
MS.gene007373.t1 MTR_2g083860 43.333 210 109 3 13 214 10 217 1.50e-45 150
MS.gene007373.t1 MTR_1g078200 41.121 214 111 5 14 214 12 223 2.86e-45 150
MS.gene007373.t1 MTR_6g079550 44.231 208 107 4 14 214 10 215 3.58e-45 149
MS.gene007373.t1 MTR_4g079350 41.784 213 107 4 13 214 10 216 3.65e-45 149
MS.gene007373.t1 MTR_8g031830 47.742 155 79 2 16 170 6 158 4.12e-45 149
MS.gene007373.t1 MTR_3g069510 45.652 184 95 3 13 193 9 190 5.29e-45 149
MS.gene007373.t1 MTR_2g005510 41.905 210 112 4 13 214 12 219 1.04e-44 149
MS.gene007373.t1 MTR_1g068730 49.007 151 74 3 11 160 10 158 8.43e-44 144
MS.gene007373.t1 MTR_8g089985 45.087 173 92 3 1 172 1 171 9.76e-44 146
MS.gene007373.t1 MTR_1g068740 49.669 151 73 3 11 160 10 158 1.03e-43 145
MS.gene007373.t1 MTR_3g086980 44.444 171 92 3 3 172 2 170 1.38e-43 145
MS.gene007373.t1 MTR_8g036220 40.175 229 120 4 1 214 1 227 1.59e-43 145
MS.gene007373.t1 MTR_7g051940 49.682 157 77 2 17 173 14 168 2.29e-43 145
MS.gene007373.t1 MTR_2g090865 42.788 208 111 4 13 214 8 213 7.36e-43 144
MS.gene007373.t1 MTR_8g027220 46.296 162 85 2 14 175 24 183 1.58e-42 143
MS.gene007373.t1 MTR_0262s0050 44.767 172 92 3 1 172 1 169 6.53e-42 141
MS.gene007373.t1 MTR_1g052475 38.208 212 117 3 14 213 13 222 1.03e-40 138
MS.gene007373.t1 MTR_7g405790 45.238 168 90 2 17 184 16 181 1.43e-40 138
MS.gene007373.t1 MTR_5g076590 38.537 205 115 5 12 214 5 200 2.59e-39 134
MS.gene007373.t1 MTR_3g064390 37.561 205 117 5 12 214 5 200 2.47e-38 131
MS.gene007373.t1 MTR_1g094220 38.043 184 110 4 3 185 18 198 1.91e-37 129
MS.gene007373.t1 MTR_2g102060 36.869 198 114 5 18 214 12 199 3.15e-37 129
MS.gene007373.t1 MTR_7g117910 44.828 145 78 2 14 158 18 160 4.05e-37 129
MS.gene007373.t1 MTR_8g107070 46.429 168 88 2 14 181 12 177 2.16e-36 128
MS.gene007373.t1 MTR_8g103550 39.181 171 101 3 15 184 8 176 5.02e-36 125
MS.gene007373.t1 MTR_8g090215 35.468 203 120 4 17 214 10 206 6.34e-36 125
MS.gene007373.t1 MTR_4g098950 36.500 200 118 5 17 212 10 204 7.41e-36 125
MS.gene007373.t1 MTR_1g094220 37.356 174 106 3 3 175 18 189 7.65e-36 125
MS.gene007373.t1 MTR_3g087160 34.343 198 128 2 17 214 10 205 2.94e-35 124
MS.gene007373.t1 MTR_1g094220 37.791 172 104 3 3 173 18 187 6.86e-35 123
MS.gene007373.t1 MTR_1g094220 36.364 187 114 4 3 186 18 202 1.94e-34 122
MS.gene007373.t1 MTR_5g013900 38.125 160 97 2 17 176 10 167 4.98e-34 120
MS.gene007373.t1 MTR_3g064390 39.073 151 87 4 12 161 5 151 1.54e-28 105
MS.gene007373.t1 MTR_2g101890 39.506 162 91 5 18 173 12 172 5.57e-28 105
MS.gene007373.t1 MTR_4g069850 36.970 165 97 4 18 176 10 173 7.06e-28 105
MS.gene007373.t1 MTR_2g090875 33.908 174 100 5 18 180 8 177 3.93e-27 102
MS.gene007373.t1 MTR_4g012940 36.416 173 103 5 10 176 2 173 4.97e-27 102
MS.gene007373.t1 MTR_8g092020 37.888 161 93 5 18 172 14 173 1.33e-26 101
MS.gene007373.t1 MTR_3g078260 31.217 189 116 4 18 195 10 195 1.61e-26 101
MS.gene007373.t1 MTR_1g097420 37.037 162 93 5 18 172 10 169 2.64e-26 100
MS.gene007373.t1 MTR_6g087980 32.967 182 107 5 18 188 8 185 3.92e-26 100
MS.gene007373.t1 MTR_4g073250 31.638 177 107 5 18 183 8 181 8.28e-26 99.4
MS.gene007373.t1 MTR_4g088055 33.526 173 100 5 18 179 8 176 1.81e-25 98.6
MS.gene007373.t1 MTR_8g075240 32.759 174 102 6 18 180 8 177 4.34e-24 95.1
MS.gene007373.t1 MTR_2g005500 33.824 204 91 3 10 213 3 162 5.68e-24 93.6
MS.gene007373.t1 MTR_5g022600 33.333 174 101 6 18 180 8 177 6.56e-24 94.4
MS.gene007373.t1 MTR_3g107717 33.529 170 108 3 16 185 13 177 8.54e-23 92.0
MS.gene007373.t1 MTR_3g107707 33.529 170 108 3 16 185 13 177 9.79e-23 92.0
MS.gene007373.t1 MTR_3g107713 33.529 170 108 3 16 185 13 177 1.01e-22 92.0
MS.gene007373.t1 MTR_1g097420 34.911 169 97 6 11 172 34 196 6.96e-22 90.1
MS.gene007373.t1 MTR_6g039490 35.000 160 99 3 18 172 10 169 1.81e-19 83.6
MS.gene007373.t1 MTR_3g078260 35.000 120 75 2 18 137 10 126 4.59e-18 77.8
MS.gene007373.t1 MTR_8g031810 41.304 92 40 1 17 108 7 84 5.48e-16 70.9
MS.gene007373.t1 MTR_5g092060 28.497 193 125 6 5 189 92 279 1.08e-15 74.3
MS.gene007373.t1 MTR_4g113620 30.337 178 102 6 16 185 13 176 3.26e-15 71.6
MS.gene007373.t1 MTR_1452s0010 46.377 69 36 1 47 115 12 79 1.93e-14 67.0
MS.gene007373.t1 MTR_4g047870 27.222 180 123 3 15 189 90 266 5.96e-14 69.3
MS.gene007373.t1 MTR_1686s0010 42.647 68 38 1 48 115 13 79 5.77e-13 62.8
MS.gene007373.t1 MTR_5g078090 32.727 165 89 9 21 175 24 176 8.09e-13 64.7
MS.gene007373.t1 MTR_8g091980 28.369 141 76 3 18 134 23 162 2.43e-11 62.4
MS.gene007373.t1 MTR_8g091980 28.369 141 76 3 18 134 23 162 2.75e-11 62.0
MS.gene007373.t1 MTR_5g015370 30.675 163 97 8 21 176 24 177 4.56e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007373.t1 AT5G03530 82.710 214 33 2 1 214 1 210 3.28e-127 357
MS.gene007373.t1 AT5G03530 82.710 214 33 2 1 214 1 210 3.28e-127 357
MS.gene007373.t1 AT1G43890 72.000 200 52 2 1 200 1 196 7.07e-105 301
MS.gene007373.t1 AT1G43890 72.000 200 52 2 1 200 1 196 7.07e-105 301
MS.gene007373.t1 AT1G43890 72.000 200 52 2 1 200 1 196 7.07e-105 301
MS.gene007373.t1 AT3G09910 71.028 214 52 3 1 214 1 204 2.22e-102 295
MS.gene007373.t1 AT3G09910 71.028 214 52 3 1 214 1 204 2.22e-102 295
MS.gene007373.t1 AT3G09910 71.028 214 52 3 1 214 1 204 2.22e-102 295
MS.gene007373.t1 AT3G09910 75.978 179 39 2 1 179 1 175 1.41e-91 267
MS.gene007373.t1 AT3G09910 75.978 179 39 2 1 179 1 175 1.41e-91 267
MS.gene007373.t1 AT3G11730 48.529 204 103 2 10 213 2 203 9.81e-61 189
MS.gene007373.t1 AT1G02130 50.000 202 97 3 13 214 5 202 1.16e-60 189
MS.gene007373.t1 AT4G17530 48.515 202 99 4 13 214 5 201 6.04e-59 184
MS.gene007373.t1 AT5G47200 48.515 202 99 4 13 214 5 201 7.68e-59 184
MS.gene007373.t1 AT3G53610 47.115 208 98 5 13 213 12 214 3.14e-56 178
MS.gene007373.t1 AT3G53610 47.115 208 98 5 13 213 12 214 3.14e-56 178
MS.gene007373.t1 AT3G53610 47.115 208 98 5 13 213 12 214 3.14e-56 178
MS.gene007373.t1 AT5G59840 46.341 205 104 4 13 213 12 214 7.66e-56 177
MS.gene007373.t1 AT3G09900 46.919 211 101 5 11 214 10 216 1.05e-55 176
MS.gene007373.t1 AT5G03520 47.847 209 100 5 11 214 10 214 2.06e-55 176
MS.gene007373.t1 AT3G46060 46.341 205 104 4 13 213 12 214 5.42e-55 175
MS.gene007373.t1 AT3G46060 46.341 205 104 4 13 213 12 214 5.42e-55 175
MS.gene007373.t1 AT3G46060 46.341 205 104 4 13 213 12 214 5.42e-55 175
MS.gene007373.t1 AT4G35860 46.047 215 95 7 13 213 3 210 8.48e-54 171
MS.gene007373.t1 AT4G17160 45.545 202 101 5 17 213 7 204 3.82e-51 164
MS.gene007373.t1 AT4G17170 44.076 211 97 6 17 213 7 210 5.60e-50 162
MS.gene007373.t1 AT1G05810 44.660 206 104 4 17 214 13 216 1.16e-47 156
MS.gene007373.t1 AT5G45750 43.810 210 106 4 13 214 10 215 1.99e-47 155
MS.gene007373.t1 AT1G05810 44.660 206 104 4 17 214 59 262 3.55e-47 156
MS.gene007373.t1 AT1G18200 51.479 169 80 2 14 182 11 177 5.02e-47 155
MS.gene007373.t1 AT5G60860 43.192 213 104 4 13 214 10 216 6.67e-47 154
MS.gene007373.t1 AT2G43130 42.308 208 113 3 12 214 8 213 1.09e-46 153
MS.gene007373.t1 AT5G47520 42.180 211 110 4 14 214 12 220 1.27e-46 153
MS.gene007373.t1 AT1G16920 45.192 208 106 4 13 214 10 215 1.49e-46 153
MS.gene007373.t1 AT1G07410 42.029 207 113 3 13 214 9 213 3.81e-46 152
MS.gene007373.t1 AT3G07410 41.935 217 116 3 6 214 2 216 1.31e-45 150
MS.gene007373.t1 AT5G59150 47.093 172 89 2 13 184 9 178 1.56e-45 150
MS.gene007373.t1 AT2G33870 42.857 210 110 5 13 214 10 217 3.20e-45 150
MS.gene007373.t1 AT1G28550 43.333 210 109 4 13 214 10 217 3.73e-45 149
MS.gene007373.t1 AT3G46830 47.093 172 89 2 13 184 9 178 4.59e-45 149
MS.gene007373.t1 AT3G46830 47.093 172 89 2 13 184 9 178 4.59e-45 149
MS.gene007373.t1 AT4G39990 46.386 166 87 2 14 179 15 178 5.54e-45 149
MS.gene007373.t1 AT2G31680 42.925 212 110 4 12 214 8 217 5.72e-45 149
MS.gene007373.t1 AT1G73640 50.000 168 82 2 14 181 11 176 6.27e-45 149
MS.gene007373.t1 AT1G09630 49.080 163 81 2 13 175 9 169 1.48e-44 148
MS.gene007373.t1 AT3G15060 42.723 213 105 4 13 214 10 216 1.66e-44 148
MS.gene007373.t1 AT3G12160 41.148 209 112 5 14 213 13 219 3.15e-44 147
MS.gene007373.t1 AT5G65270 43.094 181 100 3 1 180 1 179 4.29e-44 147
MS.gene007373.t1 AT1G06400 42.788 208 111 3 13 214 10 215 2.29e-43 145
MS.gene007373.t1 AT4G18800 41.121 214 120 3 5 214 2 213 3.09e-43 144
MS.gene007373.t1 AT4G18430 40.845 213 109 4 13 214 10 216 3.87e-43 144
MS.gene007373.t1 AT5G03520 46.286 175 85 5 45 214 34 204 2.52e-42 142
MS.gene007373.t1 AT5G47960 39.524 210 115 5 14 213 13 220 1.33e-41 140
MS.gene007373.t1 AT1G01200 41.081 185 102 4 14 193 26 208 1.13e-39 136
MS.gene007373.t1 AT4G35860 54.032 124 55 2 58 181 2 123 2.69e-39 133
MS.gene007373.t1 AT3G54840 38.172 186 111 4 1 184 18 201 4.13e-38 131
MS.gene007373.t1 AT5G45130 39.583 192 106 5 10 193 3 192 1.53e-36 127
MS.gene007373.t1 AT3G54840 38.506 174 104 3 1 173 18 189 1.85e-36 127
MS.gene007373.t1 AT3G54840 39.881 168 97 4 19 184 2 167 2.56e-36 125
MS.gene007373.t1 AT4G19640 41.358 162 93 2 18 179 12 171 4.83e-36 125
MS.gene007373.t1 AT4G39890 39.375 160 96 1 17 176 10 168 1.06e-35 125
MS.gene007373.t1 AT5G45130 39.779 181 100 4 20 193 22 200 2.64e-34 121
MS.gene007373.t1 AT2G22290 34.975 203 121 4 17 214 10 206 8.55e-34 120
MS.gene007373.t1 AT2G44610 37.500 160 98 2 17 176 10 167 3.22e-33 119
MS.gene007373.t1 AT5G10260 36.875 160 99 2 17 176 10 167 1.16e-32 117
MS.gene007373.t1 AT5G64990 38.462 156 94 2 17 172 8 161 2.73e-31 114
MS.gene007373.t1 AT5G59150 45.669 127 67 2 58 184 3 127 3.17e-30 110
MS.gene007373.t1 AT2G44690 35.955 178 100 5 18 184 20 194 1.25e-29 109
MS.gene007373.t1 AT1G22740 37.870 169 95 5 18 177 10 177 6.71e-29 107
MS.gene007373.t1 AT3G18820 33.854 192 112 5 18 195 10 200 1.42e-28 107
MS.gene007373.t1 AT5G64990 36.810 163 94 3 17 172 8 168 1.52e-28 107
MS.gene007373.t1 AT4G09720 38.788 165 94 5 18 176 10 173 5.85e-28 105
MS.gene007373.t1 AT1G52280 37.647 170 99 5 10 173 2 170 2.74e-27 103
MS.gene007373.t1 AT4G19640 41.667 132 75 2 18 149 12 141 3.12e-27 101
MS.gene007373.t1 AT4G35020 32.203 177 106 4 18 183 8 181 4.76e-27 102
MS.gene007373.t1 AT4G35020 32.203 177 106 4 18 183 8 181 4.76e-27 102
MS.gene007373.t1 AT4G35020 32.203 177 106 4 18 183 8 181 4.76e-27 102
MS.gene007373.t1 AT4G09720 37.647 170 94 4 18 176 10 178 5.20e-27 102
MS.gene007373.t1 AT1G49300 32.812 192 114 5 18 195 10 200 6.70e-27 102
MS.gene007373.t1 AT1G49300 32.812 192 114 5 18 195 10 200 6.70e-27 102
MS.gene007373.t1 AT4G09720 36.932 176 93 5 18 176 10 184 1.41e-26 102
MS.gene007373.t1 AT3G51300 33.333 174 101 5 18 180 8 177 1.74e-26 101
MS.gene007373.t1 AT4G19640 42.520 127 71 2 18 144 12 136 3.70e-26 100
MS.gene007373.t1 AT3G48040 32.402 179 106 5 18 185 10 184 4.28e-26 100
MS.gene007373.t1 AT2G21880 36.145 166 99 4 17 176 10 174 5.11e-26 100
MS.gene007373.t1 AT4G28950 32.044 181 110 5 17 188 7 183 6.28e-26 100
MS.gene007373.t1 AT2G17800 33.333 174 101 5 18 180 8 177 1.23e-25 99.0
MS.gene007373.t1 AT2G17800 33.333 174 101 5 18 180 8 177 1.23e-25 99.0
MS.gene007373.t1 AT1G20090 31.609 174 104 5 18 180 7 176 2.63e-25 98.2
MS.gene007373.t1 AT1G75840 31.609 174 104 5 18 180 8 177 4.04e-25 97.8
MS.gene007373.t1 AT3G16100 36.364 165 98 5 18 176 10 173 5.80e-25 97.4
MS.gene007373.t1 AT4G35950 32.759 174 102 5 18 180 8 177 7.82e-25 97.1
MS.gene007373.t1 AT5G45970 34.132 167 96 5 18 173 8 171 8.68e-25 97.1
MS.gene007373.t1 AT5G39620 36.471 170 101 4 17 180 6 174 3.02e-24 95.5
MS.gene007373.t1 AT5G55080 36.145 166 97 6 16 179 13 171 6.19e-23 92.4
MS.gene007373.t1 AT5G62880 32.335 167 99 4 18 173 10 173 8.14e-23 92.0
MS.gene007373.t1 AT3G48040 32.500 160 94 4 18 166 10 166 3.51e-22 89.4
MS.gene007373.t1 AT5G55190 32.584 178 107 4 16 185 13 185 6.05e-22 90.1
MS.gene007373.t1 AT5G20020 32.584 178 107 4 16 185 13 185 6.31e-22 89.7
MS.gene007373.t1 AT5G20010 32.584 178 107 4 16 185 13 185 1.16e-21 89.4
MS.gene007373.t1 AT4G09720 40.741 135 73 5 48 176 6 139 2.22e-21 87.4
MS.gene007373.t1 AT4G09720 40.741 135 73 5 48 176 6 139 2.22e-21 87.4
MS.gene007373.t1 AT4G09720 40.741 135 73 5 48 176 6 139 2.22e-21 87.4
MS.gene007373.t1 AT5G62880 31.902 163 97 4 18 169 10 169 1.85e-20 85.5
MS.gene007373.t1 AT2G21880 37.778 135 77 4 48 176 16 149 5.05e-19 81.3
MS.gene007373.t1 AT2G21880 37.778 135 77 4 48 176 16 149 5.05e-19 81.3
MS.gene007373.t1 AT4G35020 35.345 116 72 2 18 133 8 120 3.27e-18 78.2
MS.gene007373.t1 AT4G35020 35.345 116 72 2 18 133 8 120 3.27e-18 78.2
MS.gene007373.t1 AT3G51290 33.803 142 80 5 43 173 634 772 7.56e-17 79.0
MS.gene007373.t1 AT2G21880 31.325 166 99 5 17 176 10 166 1.12e-16 75.5
MS.gene007373.t1 AT5G46025 39.216 102 61 1 78 179 6 106 2.88e-16 72.0
MS.gene007373.t1 AT3G21700 29.319 191 125 4 6 189 95 282 2.48e-14 70.5
MS.gene007373.t1 AT5G09910 32.743 113 62 2 18 117 24 135 9.34e-13 66.6
MS.gene007373.t1 AT5G09910 32.743 113 62 2 18 117 24 135 9.34e-13 66.6
MS.gene007373.t1 AT5G37680 29.375 160 101 6 21 175 24 176 1.41e-12 63.9
MS.gene007373.t1 AT5G64813 28.369 141 76 3 18 134 24 163 1.13e-11 63.5
MS.gene007373.t1 AT5G64813 28.369 141 76 3 18 134 24 163 1.13e-11 63.5
MS.gene007373.t1 AT5G64813 28.369 141 76 3 18 134 24 163 1.13e-11 63.5
MS.gene007373.t1 AT3G49860 29.605 152 91 6 21 164 16 159 7.04e-11 59.3

Find 49 sgRNAs with CRISPR-Local

Find 217 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAGCAACAGCCTCCATTT+TGG 0.235437 7.4:-8399533 None:intergenic
AATGGAAGCTCCTAGTTTAT+TGG 0.249990 7.4:+8399449 MS.gene007373:CDS
ATCTTGTTGATTGGTGATTC+TGG 0.251391 7.4:+8396008 MS.gene007373:CDS
AAAGATTAAAACTTACCATT+TGG 0.318307 7.4:+8396592 MS.gene007373:CDS
AAGATTAAAACTTACCATTT+GGG 0.367846 7.4:+8396593 MS.gene007373:CDS
CTTAGCCCTTGCTAAAGAAC+TGG 0.372774 7.4:+8398617 MS.gene007373:CDS
TCTTTCAAGATCTTGTTGAT+TGG 0.384126 7.4:+8395999 MS.gene007373:CDS
AAGGATCAGCAGCAACAAAA+AGG 0.384127 7.4:+8399475 MS.gene007373:CDS
GGAACTCTATTCAACTAATC+AGG 0.391791 7.4:+8397109 MS.gene007373:CDS
GAACCACAGTCATCCCAAAA+TGG 0.392576 7.4:+8399519 MS.gene007373:CDS
AGAAGTGTGGTCTAAGGAAT+TGG 0.405138 7.4:+8397088 MS.gene007373:CDS
TTGATTGGTGATTCTGGTGT+TGG 0.414485 7.4:+8396014 MS.gene007373:CDS
TGGATATATTGCAGCTGGAC+AGG 0.439917 7.4:+8396788 MS.gene007373:intron
CAGCTGGACAGGAAAGGTTC+CGG 0.460899 7.4:+8396799 MS.gene007373:intron
AAGATCTTCAACAGAGGAGT+TGG 0.478557 7.4:-8396066 None:intergenic
CTAACAAGTTCTTACTATAG+AGG 0.484550 7.4:+8396825 MS.gene007373:CDS
AGATCTTGAAAGAGAGATCA+TGG 0.489933 7.4:-8395989 None:intergenic
ATCAAAACGCTCACGGTAGG+TGG 0.491465 7.4:+8396567 MS.gene007373:CDS
GCTCCTAGTTTATTGGAAGA+AGG 0.491779 7.4:+8399456 MS.gene007373:CDS
CACTTCTGACAAGTTTGTAA+AGG 0.493613 7.4:-8397072 None:intergenic
CTTGTCAGAAGTGTGGTCTA+AGG 0.494158 7.4:+8397082 MS.gene007373:CDS
CTTTGAAGAACTCGCTCTAA+AGG 0.500370 7.4:+8398692 MS.gene007373:CDS
GAAGATCTTTCACCTACCAT+TGG 0.506624 7.4:+8396080 MS.gene007373:CDS
AGTAAGAACTTGTTAGAGTC+CGG 0.513973 7.4:-8396818 None:intergenic
GGAGCACAAGGAATCATTCT+CGG 0.521124 7.4:+8396846 MS.gene007373:CDS
GTATATACCTGTGTCCCAAA+TGG 0.522502 7.4:-8396607 None:intergenic
AAACTTACCATTTGGGACAC+AGG 0.524690 7.4:+8396600 MS.gene007373:CDS
ATGAGTTCATCATCAGGCTC+TGG 0.529393 7.4:+8395954 MS.gene007373:CDS
AACACCCCAGTTCTTTAGCA+AGG 0.534481 7.4:-8398623 None:intergenic
TGCTAAAACTCGAGAAAATG+TGG 0.538765 7.4:+8398662 MS.gene007373:CDS
GAGTGCGTGAAGATGCTAGT+TGG 0.552532 7.4:+8397131 MS.gene007373:CDS
GATCCTTCTTCCAATAAACT+AGG 0.564612 7.4:-8399459 None:intergenic
TTAGCCCTTGCTAAAGAACT+GGG 0.569011 7.4:+8398618 MS.gene007373:CDS
TATTACTCAGGATTCTGAGA+GGG 0.575708 7.4:+8398575 MS.gene007373:intron
AGGGCTGTAAGCAGAGAAGA+GGG 0.578470 7.4:+8398594 MS.gene007373:CDS
AAGATCAAAACGCTCACGGT+AGG 0.599927 7.4:+8396564 MS.gene007373:CDS
ACACCCCAGTTCTTTAGCAA+GGG 0.602057 7.4:-8398622 None:intergenic
TCAAAACGCTCACGGTAGGT+GGG 0.605917 7.4:+8396568 MS.gene007373:CDS
GAGGGCTGTAAGCAGAGAAG+AGG 0.606706 7.4:+8398593 MS.gene007373:CDS
TTCTAGTTTATGATGTCACA+AGG 0.619598 7.4:+8397042 MS.gene007373:intron
GAGTTGTAAATACCAATGGT+AGG 0.627519 7.4:-8396092 None:intergenic
TTACAAACTTGTCAGAAGTG+TGG 0.645757 7.4:+8397075 MS.gene007373:CDS
TCAGGCTCTGGTCATAGCAG+TGG 0.656173 7.4:+8395966 MS.gene007373:CDS
CCACAGTCATCCCAAAATGG+AGG 0.659948 7.4:+8399522 MS.gene007373:CDS
AGGTGAAAGATCTTCAACAG+AGG 0.662959 7.4:-8396072 None:intergenic
TCTTACTATAGAGGAGCACA+AGG 0.667709 7.4:+8396834 MS.gene007373:CDS
TTATTACTCAGGATTCTGAG+AGG 0.670728 7.4:+8398574 MS.gene007373:intron
ATATTGCAGCTGGACAGGAA+AGG 0.695869 7.4:+8396793 MS.gene007373:intron
TAGCCCTTGCTAAAGAACTG+GGG 0.718721 7.4:+8398619 MS.gene007373:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTATTTTTTTTCTTTTT+TGG + chr7.4:8397809-8397828 MS.gene007373:intron 10.0%
!!! TTAAATTAAATTAGACATTT+TGG - chr7.4:8396741-8396760 None:intergenic 10.0%
!! TTTCACTTATAAAAACTATT+AGG - chr7.4:8397689-8397708 None:intergenic 15.0%
!!! AATGTCTAATTTAATTTAAG+TGG + chr7.4:8396742-8396761 MS.gene007373:intron 15.0%
!!! TGAAATATTTTTTATTGGAT+TGG + chr7.4:8397388-8397407 MS.gene007373:intron 15.0%
!!! TGTCTTGAAATATTTTTTAT+TGG + chr7.4:8397383-8397402 MS.gene007373:intron 15.0%
!!! TTTTTGTATAATATATTGAC+CGG + chr7.4:8399058-8399077 MS.gene007373:intron 15.0%
!! AAAGATTAAAACTTACCATT+TGG + chr7.4:8396592-8396611 MS.gene007373:CDS 20.0%
!! AAAGTCTATGAAATATTTGT+TGG + chr7.4:8397779-8397798 MS.gene007373:intron 20.0%
!! AAGATTAAAACTTACCATTT+GGG + chr7.4:8396593-8396612 MS.gene007373:CDS 20.0%
!! AAGTCTATGAAATATTTGTT+GGG + chr7.4:8397780-8397799 MS.gene007373:intron 20.0%
!! AATATAAATGAAGAATTCAG+AGG + chr7.4:8398900-8398919 MS.gene007373:intron 20.0%
!! AATCCAATGACATATATAAA+AGG - chr7.4:8396287-8396306 None:intergenic 20.0%
!! ATCTTATCTATATGTATCTT+GGG + chr7.4:8396933-8396952 MS.gene007373:intron 20.0%
!! TCTCATTTCTATTAAGTTAT+TGG + chr7.4:8396115-8396134 MS.gene007373:intron 20.0%
!!! AATATCAAAACCTTGTTTTA+TGG - chr7.4:8399336-8399355 None:intergenic 20.0%
!!! AATGGATTTTTTTATTGGAT+TGG + chr7.4:8397352-8397371 MS.gene007373:intron 20.0%
!!! ATATTTTTTATTGGATTGGT+TGG + chr7.4:8397392-8397411 MS.gene007373:intron 20.0%
!!! ATTGACTTATAAAATAGCAT+TGG + chr7.4:8396768-8396787 MS.gene007373:intron 20.0%
!!! TAAAAGAGTATTTTTCAAGT+AGG + chr7.4:8398044-8398063 MS.gene007373:intron 20.0%
!!! TACTTGAAAAATACTCTTTT+AGG - chr7.4:8398045-8398064 None:intergenic 20.0%
!!! TAGAGAATGGATTTTTTTAT+TGG + chr7.4:8397347-8397366 MS.gene007373:intron 20.0%
!!! TAGTTGTTATTTTGTTAGTA+GGG + chr7.4:8397844-8397863 MS.gene007373:intron 20.0%
!!! TATTGGTTTTGTATAAAATC+TGG + chr7.4:8399116-8399135 MS.gene007373:intron 20.0%
!!! TTAGTTGTTATTTTGTTAGT+AGG + chr7.4:8397843-8397862 MS.gene007373:intron 20.0%
! AAGAAAAAAAATAAAACGGC+TGG - chr7.4:8397806-8397825 None:intergenic 25.0%
! AATAAGTAGTCCATAAAACA+AGG + chr7.4:8399323-8399342 MS.gene007373:intron 25.0%
! AGAACCAATATTTAAGCTTA+GGG - chr7.4:8398984-8399003 None:intergenic 25.0%
! AGATTAAAGCAACATAGTTA+AGG - chr7.4:8396488-8396507 None:intergenic 25.0%
! ATCAGATATACATTTGTATG+TGG + chr7.4:8398184-8398203 MS.gene007373:intron 25.0%
! ATTACCCTAAGCTTAAATAT+TGG + chr7.4:8398977-8398996 MS.gene007373:intron 25.0%
! CTAATAAGAAGCTTACATAT+TGG + chr7.4:8399099-8399118 MS.gene007373:intron 25.0%
! CTATTATAAGAAAAGTCTTC+TGG - chr7.4:8397274-8397293 None:intergenic 25.0%
! GATCTTATCTATATGTATCT+TGG + chr7.4:8396932-8396951 MS.gene007373:intron 25.0%
! GTTCCAATTAACTAACATTA+GGG + chr7.4:8398763-8398782 MS.gene007373:intron 25.0%
! TAAGACAGAAACATCATTAA+AGG - chr7.4:8398735-8398754 None:intergenic 25.0%
! TAGAACCAATATTTAAGCTT+AGG - chr7.4:8398985-8399004 None:intergenic 25.0%
! TAGATATGTTAAATTCTTCC+AGG + chr7.4:8397240-8397259 MS.gene007373:intron 25.0%
! TGTAATCTAAAGATATACGA+CGG + chr7.4:8396379-8396398 MS.gene007373:intron 25.0%
! TGTTCCAATTAACTAACATT+AGG + chr7.4:8398762-8398781 MS.gene007373:intron 25.0%
!! ATATTTCTGTAGTTCATTCA+GGG - chr7.4:8399303-8399322 None:intergenic 25.0%
!! CATTTTGAATAGTAATGTGA+GGG - chr7.4:8398158-8398177 None:intergenic 25.0%
!! TATATTTCTGTAGTTCATTC+AGG - chr7.4:8399304-8399323 None:intergenic 25.0%
!! TCATTTTGAATAGTAATGTG+AGG - chr7.4:8398159-8398178 None:intergenic 25.0%
!!! AAGTTGATAGTTTATTCTAG+GGG - chr7.4:8399277-8399296 None:intergenic 25.0%
!!! AGTTGTTATTTTGTTAGTAG+GGG + chr7.4:8397845-8397864 MS.gene007373:intron 25.0%
!!! CAAGTTGATAGTTTATTCTA+GGG - chr7.4:8399278-8399297 None:intergenic 25.0%
!!! GATTTTTTTATTGGATTGGT+AGG + chr7.4:8397356-8397375 MS.gene007373:intron 25.0%
!!! GTTTTCTTTGTTTGTAAAAC+AGG + chr7.4:8398813-8398832 MS.gene007373:intron 25.0%
AAAATTCATCTATCTCCACA+AGG - chr7.4:8398352-8398371 None:intergenic 30.0%
AAGCAATGTTATCGTAAGTA+AGG - chr7.4:8398077-8398096 None:intergenic 30.0%
AATGACATTTGTGCTAAATG+AGG - chr7.4:8398385-8398404 None:intergenic 30.0%
ACCTATCTTAAGTATGCTTT+AGG + chr7.4:8397571-8397590 MS.gene007373:intron 30.0%
AGCAATGTTATCGTAAGTAA+GGG - chr7.4:8398076-8398095 None:intergenic 30.0%
AGCTTCCATTATCTACAAAA+TGG - chr7.4:8399439-8399458 None:intergenic 30.0%
AGTGCTTATCTACTATTCTA+CGG + chr7.4:8399147-8399166 MS.gene007373:intron 30.0%
CATATGATTTACAGTTCTAC+TGG + chr7.4:8398304-8398323 MS.gene007373:intron 30.0%
CCTAGAATAAACTATCAACT+TGG + chr7.4:8399276-8399295 MS.gene007373:intron 30.0%
CTAACAAGTTCTTACTATAG+AGG + chr7.4:8396825-8396844 MS.gene007373:CDS 30.0%
CTACACTTCACTAAGTTAAT+TGG + chr7.4:8398788-8398807 MS.gene007373:intron 30.0%
GATCTTAAAATCAACACCTA+CGG - chr7.4:8396550-8396569 None:intergenic 30.0%
GCTCAGTCTTAATATTAAGA+TGG + chr7.4:8397752-8397771 MS.gene007373:intron 30.0%
GGAGCAAAACAATTAAACAA+TGG - chr7.4:8396266-8396285 None:intergenic 30.0%
TAGTTTGAGAGAAACTTGTA+TGG + chr7.4:8399356-8399375 MS.gene007373:intron 30.0%
TATCAAAGTAAGAACTCACA+GGG - chr7.4:8398945-8398964 None:intergenic 30.0%
TCTTTCAAGATCTTGTTGAT+TGG + chr7.4:8395999-8396018 MS.gene007373:CDS 30.0%
TGTAAATCATATGCTCAAGT+TGG - chr7.4:8398297-8398316 None:intergenic 30.0%
TGTATGTCATCAGAATATCA+CGG - chr7.4:8398121-8398140 None:intergenic 30.0%
TGTTTCATCATTGAATCTGT+TGG + chr7.4:8396230-8396249 MS.gene007373:intron 30.0%
TTGTCATTAGTTCCAATGAA+TGG - chr7.4:8397483-8397502 None:intergenic 30.0%
TTGTCTATTTCACCATTCAT+TGG + chr7.4:8397468-8397487 MS.gene007373:intron 30.0%
! ATGTGAGATTTTCACATGAT+TGG + chr7.4:8398518-8398537 MS.gene007373:intron 30.0%
! GCTCCTTTTATATATGTCAT+TGG + chr7.4:8396281-8396300 MS.gene007373:intron 30.0%
! GTTATTTCATTGTCTAAACG+TGG - chr7.4:8397439-8397458 None:intergenic 30.0%
!! AGTTGATAGTTTATTCTAGG+GGG - chr7.4:8399276-8399295 None:intergenic 30.0%
!! CCAAGTTGATAGTTTATTCT+AGG - chr7.4:8399279-8399298 None:intergenic 30.0%
!! CTCTAAAGGTACGATTTTAT+AGG + chr7.4:8398706-8398725 MS.gene007373:intron 30.0%
!! TCATCAAGAAAGTACTAGTT+CGG + chr7.4:8397303-8397322 MS.gene007373:intron 30.0%
!! TTCTAGTTTATGATGTCACA+AGG + chr7.4:8397042-8397061 MS.gene007373:intron 30.0%
!!! AAGAGTATTTTTCAAGTAGG+AGG + chr7.4:8398047-8398066 MS.gene007373:intron 30.0%
!!! TTTTAAGATCAAAACGCTCA+CGG + chr7.4:8396560-8396579 MS.gene007373:CDS 30.0%
AAAGACAAGGTCTTCTAAGT+TGG - chr7.4:8397603-8397622 None:intergenic 35.0%
AAATCCATTCTCTATGCCTA+TGG - chr7.4:8397341-8397360 None:intergenic 35.0%
AATGGAAGCTCCTAGTTTAT+TGG + chr7.4:8399449-8399468 MS.gene007373:CDS 35.0%
ACACAGGTCTAATTTCATGA+AGG - chr7.4:8396662-8396681 None:intergenic 35.0%
ACATAGGAGTTGGAATGATA+AGG - chr7.4:8397889-8397908 None:intergenic 35.0%
ACGAATGTGTGAAAAATGAC+AGG + chr7.4:8397214-8397233 MS.gene007373:intron 35.0%
AGAAGACCTTGTCTTTCATA+TGG + chr7.4:8397607-8397626 MS.gene007373:intron 35.0%
AGATCTTGAAAGAGAGATCA+TGG - chr7.4:8395992-8396011 None:intergenic 35.0%
AGGTCATATCACATTGAACA+TGG - chr7.4:8398025-8398044 None:intergenic 35.0%
ATTACCATAGGCATAGAGAA+TGG + chr7.4:8397334-8397353 MS.gene007373:intron 35.0%
ATTGCACATAGCAATAGCAT+AGG + chr7.4:8398409-8398428 MS.gene007373:intron 35.0%
CAAAATGGTGCTCTACTATT+AGG - chr7.4:8399424-8399443 None:intergenic 35.0%
CACAGGTCTAATTTCATGAA+GGG - chr7.4:8396661-8396680 None:intergenic 35.0%
CACTTCTGACAAGTTTGTAA+AGG - chr7.4:8397075-8397094 None:intergenic 35.0%
CTAACACCACTCTACAAAAT+CGG - chr7.4:8397732-8397751 None:intergenic 35.0%
CTAATGTGTGTCTAAAAGTG+AGG - chr7.4:8398450-8398469 None:intergenic 35.0%
CTATCAAAGTAAGAACTCAC+AGG - chr7.4:8398946-8398965 None:intergenic 35.0%
CTGTCATCTAATATCTGCTA+TGG + chr7.4:8398550-8398569 MS.gene007373:intron 35.0%
GAGAGAGTTGTAAATACCAA+TGG - chr7.4:8396099-8396118 None:intergenic 35.0%
GAGTTGTAAATACCAATGGT+AGG - chr7.4:8396095-8396114 None:intergenic 35.0%
GATCCTTCTTCCAATAAACT+AGG - chr7.4:8399462-8399481 None:intergenic 35.0%
GCCTAAAGCATACTTAAGAT+AGG - chr7.4:8397575-8397594 None:intergenic 35.0%
GGAACTCTATTCAACTAATC+AGG + chr7.4:8397109-8397128 MS.gene007373:CDS 35.0%
GGTCATATCACATTGAACAT+GGG - chr7.4:8398024-8398043 None:intergenic 35.0%
GTGCCCTAATGTTAGTTAAT+TGG - chr7.4:8398769-8398788 None:intergenic 35.0%
TACAAGCCATATGAAAGACA+AGG - chr7.4:8397616-8397635 None:intergenic 35.0%
TAGCTAGATCAAGAATCAAG+AGG - chr7.4:8396147-8396166 None:intergenic 35.0%
TATGCTATTGCTATGTGCAA+TGG - chr7.4:8398410-8398429 None:intergenic 35.0%
TCATTGAATCTGTTGGCAAT+AGG + chr7.4:8396237-8396256 MS.gene007373:intron 35.0%
TCGGAGTTTATGATTACCAT+AGG + chr7.4:8397322-8397341 MS.gene007373:intron 35.0%
TCTGCTATGGTTTATTACTC+AGG + chr7.4:8398563-8398582 MS.gene007373:intron 35.0%
TGCTAAAACTCGAGAAAATG+TGG + chr7.4:8398662-8398681 MS.gene007373:CDS 35.0%
TTACAAACTTGTCAGAAGTG+TGG + chr7.4:8397075-8397094 MS.gene007373:CDS 35.0%
TTATTACTCAGGATTCTGAG+AGG + chr7.4:8398574-8398593 MS.gene007373:intron 35.0%
TTGTTCTTCCTGAGAAATTG+TGG + chr7.4:8396905-8396924 MS.gene007373:intron 35.0%
! AGTATTACACTGCCATTTAG+AGG + chr7.4:8398250-8398269 MS.gene007373:intron 35.0%
! ATAGTTTATTCTAGGGGGTT+GGG - chr7.4:8399271-8399290 None:intergenic 35.0%
! ATCTTGTTGATTGGTGATTC+TGG + chr7.4:8396008-8396027 MS.gene007373:CDS 35.0%
! CAAATGATAGTGCCTCTAAA+TGG - chr7.4:8398265-8398284 None:intergenic 35.0%
! GAGCACCATTTTGTAGATAA+TGG + chr7.4:8399431-8399450 MS.gene007373:intron 35.0%
! GAGTTCTTACTTTGATAGCA+GGG + chr7.4:8398948-8398967 MS.gene007373:intron 35.0%
! TATTACTCAGGATTCTGAGA+GGG + chr7.4:8398575-8398594 MS.gene007373:intron 35.0%
! TGAGATTTTCACATGATTGG+TGG + chr7.4:8398521-8398540 MS.gene007373:intron 35.0%
! TGAGTTCTTACTTTGATAGC+AGG + chr7.4:8398947-8398966 MS.gene007373:intron 35.0%
! TTAGTATTTTTCTCCTTGCC+AGG + chr7.4:8399181-8399200 MS.gene007373:intron 35.0%
!! AAAAGGTGGCTTGTAGTTTT+GGG - chr7.4:8397917-8397936 None:intergenic 35.0%
!! AGTAAGAACTTGTTAGAGTC+CGG - chr7.4:8396821-8396840 None:intergenic 35.0%
!! ATGTTGTTTCTATGATCCGT+AGG + chr7.4:8396531-8396550 MS.gene007373:intron 35.0%
!! ATTGGATTGGTTGGAAATTG+TGG + chr7.4:8397401-8397420 MS.gene007373:intron 35.0%
!!! TGTTATTTTGTTAGTAGGGG+TGG + chr7.4:8397848-8397867 MS.gene007373:intron 35.0%
AAGATCTTCAACAGAGGAGT+TGG - chr7.4:8396069-8396088 None:intergenic 40.0%
AAGGATCAGCAGCAACAAAA+AGG + chr7.4:8399475-8399494 MS.gene007373:CDS 40.0%
AATAGTAATGTGAGGGATCC+GGG - chr7.4:8398151-8398170 None:intergenic 40.0%
ACATTGTGAGATCCATTCCT+AGG - chr7.4:8398502-8398521 None:intergenic 40.0%
AGCTGAGAAGTTAAAGATCC+AGG - chr7.4:8399215-8399234 None:intergenic 40.0%
AGGTGAAAGATCTTCAACAG+AGG - chr7.4:8396075-8396094 None:intergenic 40.0%
ATCTCCACAAGGTTCTTCAA+TGG - chr7.4:8398341-8398360 None:intergenic 40.0%
ATGCTGCTAAGATTGAACAC+AGG - chr7.4:8396678-8396697 None:intergenic 40.0%
CACGCTCAAAACTAGACATT+TGG - chr7.4:8397983-8398002 None:intergenic 40.0%
CTATCCGTTATTGAGCTACT+CGG + chr7.4:8397949-8397968 MS.gene007373:intron 40.0%
CTGAGAAGTTAAAGATCCAG+GGG - chr7.4:8399213-8399232 None:intergenic 40.0%
CTTGTTAGCTGTTATCTCAG+TGG + chr7.4:8396342-8396361 MS.gene007373:intron 40.0%
GAAACCATTGAAGAACCTTG+TGG + chr7.4:8398334-8398353 MS.gene007373:intron 40.0%
GAAGATCTTTCACCTACCAT+TGG + chr7.4:8396080-8396099 MS.gene007373:CDS 40.0%
GAATAGTAATGTGAGGGATC+CGG - chr7.4:8398152-8398171 None:intergenic 40.0%
GATCAAAGCCACAATTTCTC+AGG - chr7.4:8396916-8396935 None:intergenic 40.0%
GCTCCTAGTTTATTGGAAGA+AGG + chr7.4:8399456-8399475 MS.gene007373:CDS 40.0%
GCTGAGAAGTTAAAGATCCA+GGG - chr7.4:8399214-8399233 None:intergenic 40.0%
GTATATACCTGTGTCCCAAA+TGG - chr7.4:8396610-8396629 None:intergenic 40.0%
GTCTAATGTGAGACTCTGAA+CGG - chr7.4:8397657-8397676 None:intergenic 40.0%
TAGGAGTTGGAATGATAAGG+AGG - chr7.4:8397886-8397905 None:intergenic 40.0%
TATCCGTTATTGAGCTACTC+GGG + chr7.4:8397950-8397969 MS.gene007373:intron 40.0%
TCATCAGAATATCACGGTGA+TGG - chr7.4:8398115-8398134 None:intergenic 40.0%
TTAGCCCTTGCTAAAGAACT+GGG + chr7.4:8398618-8398637 MS.gene007373:CDS 40.0%
! AAACTTACCATTTGGGACAC+AGG + chr7.4:8396600-8396619 MS.gene007373:CDS 40.0%
! AGAAGTGTGGTCTAAGGAAT+TGG + chr7.4:8397088-8397107 MS.gene007373:CDS 40.0%
! AGCATTGGATATATTGCAGC+TGG + chr7.4:8396783-8396802 MS.gene007373:intron 40.0%
! CGATTTTGTAGAGTGGTGTT+AGG + chr7.4:8397730-8397749 MS.gene007373:intron 40.0%
! CTTTGAAGAACTCGCTCTAA+AGG + chr7.4:8398692-8398711 MS.gene007373:CDS 40.0%
! GATAGTTTATTCTAGGGGGT+TGG - chr7.4:8399272-8399291 None:intergenic 40.0%
! TCTTACTATAGAGGAGCACA+AGG + chr7.4:8396834-8396853 MS.gene007373:CDS 40.0%
! TTGATTGGTGATTCTGGTGT+TGG + chr7.4:8396014-8396033 MS.gene007373:CDS 40.0%
!! AAAGGTGGCTTGTAGTTTTG+GGG - chr7.4:8397916-8397935 None:intergenic 40.0%
!! CTCAATAACGGATAGTCCAA+GGG - chr7.4:8397944-8397963 None:intergenic 40.0%
!! GAAAAGGTGGCTTGTAGTTT+TGG - chr7.4:8397918-8397937 None:intergenic 40.0%
!! TACAAGCCGATTTTGTAGAG+TGG + chr7.4:8397723-8397742 MS.gene007373:intron 40.0%
!! TAGGAGTTCTGGAAAGCTAA+GGG - chr7.4:8398483-8398502 None:intergenic 40.0%
AACACCCCAGTTCTTTAGCA+AGG - chr7.4:8398626-8398645 None:intergenic 45.0%
AAGATCAAAACGCTCACGGT+AGG + chr7.4:8396564-8396583 MS.gene007373:CDS 45.0%
ACACCCCAGTTCTTTAGCAA+GGG - chr7.4:8398625-8398644 None:intergenic 45.0%
AGATCCATTCCTAGGAGTTC+TGG - chr7.4:8398494-8398513 None:intergenic 45.0%
ATAGTAATGTGAGGGATCCG+GGG - chr7.4:8398150-8398169 None:intergenic 45.0%
ATATTGCAGCTGGACAGGAA+AGG + chr7.4:8396793-8396812 MS.gene007373:intron 45.0%
ATGAGTTCATCATCAGGCTC+TGG + chr7.4:8395954-8395973 MS.gene007373:CDS 45.0%
CTTAGCCCTTGCTAAAGAAC+TGG + chr7.4:8398617-8398636 MS.gene007373:CDS 45.0%
CTTTCCAGAACTCCTAGGAA+TGG + chr7.4:8398487-8398506 MS.gene007373:intron 45.0%
GAACCACAGTCATCCCAAAA+TGG + chr7.4:8399519-8399538 MS.gene007373:CDS 45.0%
GATAGTCCAAGGGAGTGAAA+AGG - chr7.4:8397934-8397953 None:intergenic 45.0%
GATGACATACATCAGAACCC+CGG + chr7.4:8398130-8398149 MS.gene007373:intron 45.0%
GGAGCACAAGGAATCATTCT+CGG + chr7.4:8396846-8396865 MS.gene007373:CDS 45.0%
TAGCCCTTGCTAAAGAACTG+GGG + chr7.4:8398619-8398638 MS.gene007373:CDS 45.0%
TGACCCGAGTAGCTCAATAA+CGG - chr7.4:8397956-8397975 None:intergenic 45.0%
TGGATATATTGCAGCTGGAC+AGG + chr7.4:8396788-8396807 MS.gene007373:intron 45.0%
! AAGAGCAACAGCCTCCATTT+TGG - chr7.4:8399536-8399555 None:intergenic 45.0%
! AGAGCAACAGCCTCCATTTT+GGG - chr7.4:8399535-8399554 None:intergenic 45.0%
! AGTCTTCTGGTAATGCAACC+TGG - chr7.4:8397261-8397280 None:intergenic 45.0%
! CTTAGCTTTCCAGAACTCCT+AGG + chr7.4:8398482-8398501 MS.gene007373:intron 45.0%
! CTTGTCAGAAGTGTGGTCTA+AGG + chr7.4:8397082-8397101 MS.gene007373:CDS 45.0%
! TCAGAATATCACGGTGATGG+TGG - chr7.4:8398112-8398131 None:intergenic 45.0%
!! AGCTCAACTGGTTTGAGCTA+AGG - chr7.4:8399247-8399266 None:intergenic 45.0%
!! CTAGGAGTTCTGGAAAGCTA+AGG - chr7.4:8398484-8398503 None:intergenic 45.0%
!! GCTCAACTGGTTTGAGCTAA+GGG - chr7.4:8399246-8399265 None:intergenic 45.0%
!! GCTCAATAACGGATAGTCCA+AGG - chr7.4:8397945-8397964 None:intergenic 45.0%
!!! GTAGTTTTGGGGAGGAACAT+AGG - chr7.4:8397905-8397924 None:intergenic 45.0%
!!! GTCTAGTTTTGAGCGTGAGA+GGG + chr7.4:8397986-8398005 MS.gene007373:intron 45.0%
!!! TGTCTAGTTTTGAGCGTGAG+AGG + chr7.4:8397985-8398004 MS.gene007373:intron 45.0%
!! AAAAAAGAAAAAAAATAAAA+CGG - chr7.4:8397810-8397829 None:intergenic 5.0%
AGGGCTGTAAGCAGAGAAGA+GGG + chr7.4:8398594-8398613 MS.gene007373:CDS 50.0%
AGTCCAAGGGAGTGAAAAGG+TGG - chr7.4:8397931-8397950 None:intergenic 50.0%
ATCAAAACGCTCACGGTAGG+TGG + chr7.4:8396567-8396586 MS.gene007373:CDS 50.0%
CCACAGTCATCCCAAAATGG+AGG + chr7.4:8399522-8399541 MS.gene007373:CDS 50.0%
GAGTGCGTGAAGATGCTAGT+TGG + chr7.4:8397131-8397150 MS.gene007373:CDS 50.0%
TCAAAACGCTCACGGTAGGT+GGG + chr7.4:8396568-8396587 MS.gene007373:CDS 50.0%
TTGGGGAGGAACATAGGAGT+TGG - chr7.4:8397899-8397918 None:intergenic 50.0%
! AAGCCACCTTTTCACTCCCT+TGG + chr7.4:8397925-8397944 MS.gene007373:intron 50.0%
!!! CCTCCATTTTGGGATGACTG+TGG - chr7.4:8399525-8399544 None:intergenic 50.0%
AAGATCCAGGGGTCAAGTCC+TGG - chr7.4:8399202-8399221 None:intergenic 55.0%
CAGCTGGACAGGAAAGGTTC+CGG + chr7.4:8396799-8396818 MS.gene007373:intron 55.0%
GAGGGCTGTAAGCAGAGAAG+AGG + chr7.4:8398593-8398612 MS.gene007373:CDS 55.0%
GATGCCTGTGCATCAACGTC+CGG - chr7.4:8399080-8399099 None:intergenic 55.0%
TTGACCGGACGTTGATGCAC+AGG + chr7.4:8399073-8399092 MS.gene007373:intron 55.0%
! TCAGGCTCTGGTCATAGCAG+TGG + chr7.4:8395966-8395985 MS.gene007373:CDS 55.0%
!!! GGTGGCTTGTAGTTTTGGGG+AGG - chr7.4:8397913-8397932 None:intergenic 55.0%
AGGGGGTTGGGTAGCTCAAC+TGG - chr7.4:8399259-8399278 None:intergenic 60.0%
CCAGGGGTCAAGTCCTGGCA+AGG - chr7.4:8399197-8399216 None:intergenic 65.0%
CCTTGCCAGGACTTGACCCC+TGG + chr7.4:8399194-8399213 MS.gene007373:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 8395954 8399557 8395954 ID=MS.gene007373
chr7.4 mRNA 8395954 8399557 8395954 ID=MS.gene007373.t1;Parent=MS.gene007373
chr7.4 exon 8395954 8396101 8395954 ID=MS.gene007373.t1.exon1;Parent=MS.gene007373.t1
chr7.4 CDS 8395954 8396101 8395954 ID=cds.MS.gene007373.t1;Parent=MS.gene007373.t1
chr7.4 exon 8396553 8396621 8396553 ID=MS.gene007373.t1.exon2;Parent=MS.gene007373.t1
chr7.4 CDS 8396553 8396621 8396553 ID=cds.MS.gene007373.t1;Parent=MS.gene007373.t1
chr7.4 exon 8396802 8396867 8396802 ID=MS.gene007373.t1.exon3;Parent=MS.gene007373.t1
chr7.4 CDS 8396802 8396867 8396802 ID=cds.MS.gene007373.t1;Parent=MS.gene007373.t1
chr7.4 exon 8397048 8397169 8397048 ID=MS.gene007373.t1.exon4;Parent=MS.gene007373.t1
chr7.4 CDS 8397048 8397169 8397048 ID=cds.MS.gene007373.t1;Parent=MS.gene007373.t1
chr7.4 exon 8398585 8398713 8398585 ID=MS.gene007373.t1.exon5;Parent=MS.gene007373.t1
chr7.4 CDS 8398585 8398713 8398585 ID=cds.MS.gene007373.t1;Parent=MS.gene007373.t1
chr7.4 exon 8399447 8399557 8399447 ID=MS.gene007373.t1.exon6;Parent=MS.gene007373.t1
chr7.4 CDS 8399447 8399557 8399447 ID=cds.MS.gene007373.t1;Parent=MS.gene007373.t1
Gene Sequence

>MS.gene007373

ATGAGTTCATCATCAGGCTCTGGTCATAGCAGTGGCCATGATCTCTCTTTCAAGATCTTGTTGATTGGTGATTCTGGTGTTGGAAAAAGTTGTTTACTTGTCACTTTCATTTCCAACTCCTCTGTTGAAGATCTTTCACCTACCATTGGTATTTACAACTCTCTCATTTCTATTAAGTTATTGGTGTCTGCCTCTTGATTCTTGATCTAGCTATTGATTATAATTACACTGTTCAATTCAAATTCTGAATGTTAAATTAAATTTGTCAATTCAATTTGTTTCATCATTGAATCTGTTGGCAATAGGATGCCATTGTTTAATTGTTTTGCTCCTTTTATATATGTCATTGGATTGTAATTAACAAACTATTTAATTTATGCACTCATTTCTTGTTAGCTGTTATCTCAGTGGTAAGAGTTTGATCTTGTAATCTAAAGATATACGACGGTTGTATAATGATCATTAATATCACTTTAGTTGATAATAATTTTCGCTTTCTCTAATTTTATTTTATTTTAAAATGCTCTCATTCCTTAACTATGTTGCTTTAATCTGATTTGAGTTTTCATATGATCTAATGTTGTTTCTATGATCCGTAGGTGTTGATTTTAAGATCAAAACGCTCACGGTAGGTGGGAAAAGATTAAAACTTACCATTTGGGACACAGGTATATACATATTAGAGTCATAAAATCTTCTGTTTTCCCTTCATGAAATTAGACCTGTGTTCAATCTTAGCAGCATGTGATTCATAGAGTTTTCTGTTGAATAATTTGTTAATTTACCAAAATGTCTAATTTAATTTAAGTGGTAAATTGACTTATAAAATAGCATTGGATATATTGCAGCTGGACAGGAAAGGTTCCGGACTCTAACAAGTTCTTACTATAGAGGAGCACAAGGAATCATTCTCGGTATGCTCAGTTTATGTACATGTAGATATCTGTTACATTGTTCTTCCTGAGAAATTGTGGCTTTGATCTTATCTATATGTATCTTGGGACTAAAGTATCTCTCTCTATTACTGATATAAGTCACTTTTTCTAATGTTAATGATTTCTATTTATAGAGTGCTTTGTTTTCTTATCTTCTAGTTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTGTCAGAAGTGTGGTCTAAGGAATTGGAACTCTATTCAACTAATCAGGAGTGCGTGAAGATGCTAGTTGGAAATAAAGTTGACAAAGTAAGTTTTATGTTCTAATTAGTAAAAATCTCGCATAAGATTGCACGAATGTGTGAAAAATGACAGGAAATAGATATGTTAAATTCTTCCAGGTTGCATTACCAGAAGACTTTTCTTATAATAGATAGATAGATCATCAAGAAAGTACTAGTTCGGAGTTTATGATTACCATAGGCATAGAGAATGGATTTTTTTATTGGATTGGTAGGAAATTGTCTTGAAATATTTTTTATTGGATTGGTTGGAAATTGTGGTTTTGATCTTATCCACGTTTAGACAATGAAATAACATTTAAGTTTTGTCTATTTCACCATTCATTGGAACTAATGACAATGAGTCAATGCTCACATTATGAGAAAATTAAGACATTCTCATGATTTCAAATAATAAATTCAATTCTAACCTATCTTAAGTATGCTTTAGGCGTTGTCCAACTTAGAAGACCTTGTCTTTCATATGGCTTGTATACATGAACACGTTCATACCGTTCAGAGTCTCACATTAGACGTAATATTGCCTAATAGTTTTTATAAGTGAAAGACATCTCTCACGTTACAAGCCGATTTTGTAGAGTGGTGTTAGGCTCAGTCTTAATATTAAGATGGTATCAAAGTCTATGAAATATTTGTTGGGCCAGCCGTTTTATTTTTTTTCTTTTTTGGAATTACATATCTTAGTTGTTATTTTGTTAGTAGGGGTGGTTGAATTCATGACCTCCTTATCATTCCAACTCCTATGTTCCTCCCCAAAACTACAAGCCACCTTTTCACTCCCTTGGACTATCCGTTATTGAGCTACTCGGGTCAAGCTCCAAATGTCTAGTTTTGAGCGTGAGAGGGTGCATTGAAAGTCCCATGTTCAATGTGATATGACCTAAAAGAGTATTTTTCAAGTAGGAGGCATCCCTTACTTACGATAACATTGCTTCACACTTTTCTGCCACCATCACCGTGATATTCTGATGACATACATCAGAACCCCGGATCCCTCACATTACTATTCAAAATGAATGAAATCAGATATACATTTGTATGTGGCAATGCTTGTGATATTAACACTTGCATTTCAGTGAATTTGTGAAGTATTACACTGCCATTTAGAGGCACTATCATTTGTCTAAGCAACCAACTTGAGCATATGATTTACAGTTCTACTGGACATTCTGAAACCATTGAAGAACCTTGTGGAGATAGATGAATTTTTGTATTAGAACCTCATTTAGCACAAATGTCATTTACCATTGCACATAGCAATAGCATAGGTTCAGATCACGAATACCTCACTTTTAGACACACATTAGATTTATTAGACCCTTAGCTTTCCAGAACTCCTAGGAATGGATCTCACAATGTGAGATTTTCACATGATTGGTGGCTCTGTCTGTCATCTAATATCTGCTATGGTTTATTACTCAGGATTCTGAGAGGGCTGTAAGCAGAGAAGAGGGCTTAGCCCTTGCTAAAGAACTGGGGTGTTTGCTTCTTGAATGTAGTGCTAAAACTCGAGAAAATGTGGAGAAGTGCTTTGAAGAACTCGCTCTAAAGGTACGATTTTATAGGTTTCCTTTAATGATGTTTCTGTCTTATGCATATTGTTCCAATTAACTAACATTAGGGCACTACACTTCACTAAGTTAATTGGTAGTTTTCTTTGTTTGTAAAACAGGTTGCAATTTCTGTATACTCTAATATGCTTAGTATATAGTTTTTCAATTCATTCATCATTCATTTAATATAAATGAAGAATTCAGAGGAATTTGCTCTTCTCTCACACCCTGTGAGTTCTTACTTTGATAGCAGGGTGACAAATTACCCTAAGCTTAAATATTGGTTCTAAAAATATAATAACTCAACTGAGAAATCTGCATACAGAAGAAGTATAAGAAGTGTTTTTGTATAATATATTGACCGGACGTTGATGCACAGGCATCTAATAAGAAGCTTACATATTGGTTTTGTATAAAATCTGGTTTTAAAAAGTGCTTATCTACTATTCTACGGCTTTTGTTAAGTTAGTATTTTTCTCCTTGCCAGGACTTGACCCCTGGATCTTTAACTTCTCAGCTCATTTAATCCCTTAGCTCAAACCAGTTGAGCTACCCAACCCCCTAGAATAAACTATCAACTTGGTCCCTGAATGAACTACAGAAATATAATAAGTAGTCCATAAAACAAGGTTTTGATATTTAGTTTGAGAGAAACTTGTATGGTAAATTGATTGATTGTGTATTTTTTTATATATCAAATTATGACCTAATAGTAGAGCACCATTTTGTAGATAATGGAAGCTCCTAGTTTATTGGAAGAAGGATCAGCAGCAACAAAAAGGAATGTTTTAAAACAGAAACAAGAACCACAGTCATCCCAAAATGGAGGCTGTTGCTCTTAA
Protein sequence

>MS.gene007373.t1

MSSSSGSGHSSGHDLSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNKVDKDSERAVSREEGLALAKELGCLLLECSAKTRENVEKCFEELALKIMEAPSLLEEGSAATKRNVLKQKQEPQSSQNGGCCS