AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene61282


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61282.t1 MTR_7g081700 88.119 202 24 0 1 202 1 202 3.33e-137 382
MS.gene61282.t1 MTR_8g006970 87.879 198 23 1 6 202 20 217 8.10e-130 364
MS.gene61282.t1 MTR_4g099470 100.000 173 0 0 30 202 6 178 2.20e-128 358
MS.gene61282.t1 MTR_2g005500 77.778 198 43 1 4 200 5 202 4.19e-116 328
MS.gene61282.t1 MTR_8g006970 88.953 172 19 0 1 172 1 172 4.72e-114 323
MS.gene61282.t1 MTR_1g115325 58.537 205 76 3 4 200 11 214 1.84e-85 251
MS.gene61282.t1 MTR_1g068740 58.654 208 75 4 4 202 11 216 3.25e-85 251
MS.gene61282.t1 MTR_7g100020 59.135 208 74 4 4 202 11 216 7.64e-85 250
MS.gene61282.t1 MTR_1g068730 58.173 208 76 4 4 202 11 216 1.08e-84 249
MS.gene61282.t1 MTR_4g063160 57.488 207 76 5 4 200 11 215 5.98e-81 240
MS.gene61282.t1 MTR_2g005500 58.586 198 41 2 4 200 5 162 9.38e-77 228
MS.gene61282.t1 MTR_2g096550 52.657 207 81 5 5 200 12 212 8.51e-72 217
MS.gene61282.t1 MTR_1g068740 65.101 149 51 1 4 152 11 158 1.69e-68 208
MS.gene61282.t1 MTR_1g068730 64.430 149 52 1 4 152 11 158 2.00e-67 204
MS.gene61282.t1 MTR_4g064897 46.445 211 104 2 1 202 5 215 2.70e-66 203
MS.gene61282.t1 MTR_2g005510 47.619 210 99 3 4 202 11 220 1.82e-63 196
MS.gene61282.t1 MTR_2g027660 45.455 209 102 1 5 201 3 211 8.75e-62 191
MS.gene61282.t1 MTR_6g021790 54.545 165 75 0 5 169 3 167 9.14e-62 191
MS.gene61282.t1 MTR_3g069510 45.794 214 100 3 1 201 5 215 5.54e-61 189
MS.gene61282.t1 MTR_2g075950 46.445 211 103 2 2 202 7 217 7.42e-61 189
MS.gene61282.t1 MTR_8g031660 52.071 169 81 0 5 173 3 171 4.64e-60 187
MS.gene61282.t1 MTR_8g093740 48.259 201 99 4 4 200 9 208 5.96e-60 186
MS.gene61282.t1 MTR_4g088090 45.024 211 106 1 2 202 7 217 2.22e-59 185
MS.gene61282.t1 MTR_2g014990 45.024 211 106 1 2 202 7 217 2.32e-59 185
MS.gene61282.t1 MTR_7g051940 47.059 204 99 1 7 201 12 215 4.14e-59 184
MS.gene61282.t1 MTR_1g078200 46.698 212 97 3 6 201 12 223 4.69e-59 185
MS.gene61282.t1 MTR_3g086980 43.868 212 106 2 2 200 10 221 5.66e-59 184
MS.gene61282.t1 MTR_8g089985 52.632 171 79 2 2 171 11 180 8.80e-59 184
MS.gene61282.t1 MTR_7g103070 47.525 202 101 3 5 201 13 214 1.06e-58 184
MS.gene61282.t1 MTR_4g079350 44.550 211 107 1 2 202 7 217 1.59e-58 183
MS.gene61282.t1 MTR_2g090865 45.498 211 106 1 1 202 4 214 3.46e-58 182
MS.gene61282.t1 MTR_8g031870 50.610 164 81 0 7 170 5 168 8.63e-58 180
MS.gene61282.t1 MTR_2g083860 46.009 213 102 3 2 202 7 218 1.96e-57 181
MS.gene61282.t1 MTR_1g029450 48.768 203 98 4 4 201 13 214 6.47e-57 179
MS.gene61282.t1 MTR_8g027220 43.434 198 112 0 1 198 19 216 1.14e-56 179
MS.gene61282.t1 MTR_3g096350 46.269 201 103 4 4 200 8 207 4.42e-56 177
MS.gene61282.t1 MTR_1g062760 47.264 201 100 5 5 200 11 210 8.69e-56 176
MS.gene61282.t1 MTR_0262s0050 43.128 211 108 2 2 200 9 219 6.34e-55 174
MS.gene61282.t1 MTR_8g031680 48.485 165 85 0 5 169 3 167 1.51e-54 173
MS.gene61282.t1 MTR_6g079550 48.925 186 93 2 1 185 5 189 2.70e-54 172
MS.gene61282.t1 MTR_1g090717 47.549 204 103 4 2 201 9 212 5.53e-54 171
MS.gene61282.t1 MTR_8g036220 47.368 171 90 0 6 176 14 184 1.03e-53 171
MS.gene61282.t1 MTR_1g052475 48.810 168 86 0 2 169 9 176 1.34e-53 171
MS.gene61282.t1 MTR_7g405790 47.126 174 92 0 7 180 14 187 3.37e-52 167
MS.gene61282.t1 MTR_8g107070 54.706 170 75 2 1 169 7 175 5.36e-52 168
MS.gene61282.t1 MTR_3g064390 44.103 195 100 4 10 201 12 200 7.76e-52 166
MS.gene61282.t1 MTR_8g031830 46.591 176 90 1 7 178 5 180 1.84e-51 164
MS.gene61282.t1 MTR_5g076590 42.268 194 105 3 10 201 12 200 3.03e-50 161
MS.gene61282.t1 MTR_8g103550 41.237 194 106 3 10 201 11 198 1.20e-47 155
MS.gene61282.t1 MTR_3g096350 54.225 142 59 4 4 143 8 145 3.97e-47 152
MS.gene61282.t1 MTR_3g096350 57.778 135 50 4 4 136 8 137 6.09e-46 149
MS.gene61282.t1 MTR_7g117910 47.552 143 74 1 6 148 18 159 5.04e-44 146
MS.gene61282.t1 MTR_8g093740 44.118 170 91 3 35 200 6 175 5.83e-44 145
MS.gene61282.t1 MTR_2g102060 38.974 195 111 3 10 202 12 200 2.43e-43 144
MS.gene61282.t1 MTR_1g094220 42.236 161 92 1 10 169 33 193 3.64e-43 143
MS.gene61282.t1 MTR_8g090215 37.056 197 120 1 9 201 10 206 7.30e-43 143
MS.gene61282.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 1.46e-42 142
MS.gene61282.t1 MTR_5g013900 36.735 196 119 1 9 199 10 205 1.52e-42 142
MS.gene61282.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 1.64e-42 142
MS.gene61282.t1 MTR_1g094220 43.506 154 86 1 10 162 33 186 4.66e-42 142
MS.gene61282.t1 MTR_4g098950 39.752 161 97 0 9 169 10 170 1.30e-41 140
MS.gene61282.t1 MTR_3g087160 41.615 161 94 0 9 169 10 170 2.22e-41 139
MS.gene61282.t1 MTR_2g101890 38.308 201 113 5 8 200 10 207 5.78e-40 135
MS.gene61282.t1 MTR_4g012940 38.308 201 113 5 8 200 8 205 2.38e-39 134
MS.gene61282.t1 MTR_7g103070 45.098 153 79 3 54 201 6 158 8.77e-39 131
MS.gene61282.t1 MTR_4g069850 40.476 168 93 3 8 168 8 175 4.36e-38 130
MS.gene61282.t1 MTR_3g064390 45.669 127 69 0 10 136 12 138 9.78e-37 125
MS.gene61282.t1 MTR_1g097420 37.952 166 96 3 8 166 8 173 6.76e-34 120
MS.gene61282.t1 MTR_8g092020 36.747 166 98 2 8 166 12 177 7.33e-33 117
MS.gene61282.t1 MTR_6g039490 34.804 204 113 6 8 199 8 203 6.75e-30 110
MS.gene61282.t1 MTR_1g097420 35.119 168 100 4 6 166 35 200 4.96e-28 105
MS.gene61282.t1 MTR_4g015220 55.696 79 35 0 122 200 2 80 1.86e-26 97.1
MS.gene61282.t1 MTR_3g107707 30.435 184 119 4 9 188 14 192 2.55e-24 95.9
MS.gene61282.t1 MTR_3g107713 30.435 184 119 4 9 188 14 192 2.58e-24 95.9
MS.gene61282.t1 MTR_3g107717 30.435 184 119 4 9 188 14 192 2.75e-24 95.5
MS.gene61282.t1 MTR_4g088055 31.361 169 102 5 8 164 6 172 6.37e-23 91.7
MS.gene61282.t1 MTR_4g073250 31.737 167 100 5 8 162 6 170 8.67e-23 91.3
MS.gene61282.t1 MTR_6g087980 31.737 167 100 5 8 162 6 170 1.08e-22 91.3
MS.gene61282.t1 MTR_8g075240 31.953 169 101 5 8 164 6 172 3.09e-22 89.7
MS.gene61282.t1 MTR_5g022600 31.361 169 102 5 8 164 6 172 1.57e-21 87.8
MS.gene61282.t1 MTR_1g059590 36.416 173 100 4 5 177 395 557 2.32e-21 91.3
MS.gene61282.t1 MTR_1g059590 36.416 173 100 4 5 177 428 590 2.82e-21 91.3
MS.gene61282.t1 MTR_3g078260 30.220 182 108 6 8 177 8 182 4.57e-21 87.0
MS.gene61282.t1 MTR_2g090875 29.586 169 105 5 8 164 6 172 8.60e-21 85.9
MS.gene61282.t1 MTR_4g113620 30.000 170 97 5 9 173 14 166 2.78e-20 85.1
MS.gene61282.t1 MTR_8g031810 39.048 105 50 1 7 111 5 95 2.98e-20 81.6
MS.gene61282.t1 MTR_3g078260 33.621 116 74 3 8 122 8 121 1.78e-17 75.9
MS.gene61282.t1 MTR_1452s0010 44.286 70 39 0 37 106 10 79 1.94e-16 72.0
MS.gene61282.t1 MTR_5g078090 36.232 138 78 4 9 145 20 148 4.72e-15 70.5
MS.gene61282.t1 MTR_1686s0010 40.000 70 42 0 37 106 10 79 1.22e-13 64.3
MS.gene61282.t1 MTR_5g015370 28.994 169 110 5 9 172 20 183 1.88e-12 63.5
MS.gene61282.t1 MTR_1g069245 41.026 78 45 1 37 114 122 198 7.67e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene61282.t1 AT5G47200 90.099 202 20 0 1 202 1 202 1.90e-139 387
MS.gene61282.t1 AT4G17530 89.604 202 21 0 1 202 1 202 1.01e-138 386
MS.gene61282.t1 AT1G02130 87.192 203 25 1 1 202 1 203 2.29e-134 375
MS.gene61282.t1 AT3G11730 75.369 203 47 3 1 200 1 203 2.84e-114 324
MS.gene61282.t1 AT5G59840 59.615 208 73 4 4 202 11 216 1.23e-86 254
MS.gene61282.t1 AT3G46060 58.654 208 75 4 4 202 11 216 2.30e-85 251
MS.gene61282.t1 AT3G46060 58.654 208 75 4 4 202 11 216 2.30e-85 251
MS.gene61282.t1 AT3G46060 58.654 208 75 4 4 202 11 216 2.30e-85 251
MS.gene61282.t1 AT3G53610 57.488 207 79 3 4 202 11 216 2.14e-84 249
MS.gene61282.t1 AT3G53610 57.488 207 79 3 4 202 11 216 2.14e-84 249
MS.gene61282.t1 AT3G53610 57.488 207 79 3 4 202 11 216 2.14e-84 249
MS.gene61282.t1 AT3G09900 58.454 207 76 3 4 201 11 216 5.18e-82 243
MS.gene61282.t1 AT5G03520 59.024 205 76 3 4 201 11 214 2.53e-81 241
MS.gene61282.t1 AT4G17160 48.768 203 96 2 5 200 3 204 1.16e-65 201
MS.gene61282.t1 AT1G07410 45.714 210 106 2 1 202 5 214 1.12e-64 199
MS.gene61282.t1 AT5G47520 49.048 210 94 2 6 202 12 221 1.05e-63 196
MS.gene61282.t1 AT4G35860 45.370 216 92 2 5 201 3 211 1.81e-63 196
MS.gene61282.t1 AT1G09630 47.170 212 100 3 2 202 6 216 8.82e-63 194
MS.gene61282.t1 AT4G17170 46.411 209 100 2 5 201 3 211 3.44e-62 192
MS.gene61282.t1 AT5G45750 47.619 210 101 2 2 202 7 216 8.34e-62 191
MS.gene61282.t1 AT3G46830 44.131 213 108 1 1 202 5 217 3.51e-61 190
MS.gene61282.t1 AT3G46830 44.131 213 108 1 1 202 5 217 3.51e-61 190
MS.gene61282.t1 AT3G15060 48.113 212 98 3 2 202 7 217 4.36e-61 190
MS.gene61282.t1 AT5G03520 54.819 166 67 3 43 201 40 204 1.33e-60 188
MS.gene61282.t1 AT5G60860 45.972 211 104 1 2 202 7 217 1.67e-60 188
MS.gene61282.t1 AT1G28550 47.393 211 98 3 4 202 9 218 2.02e-60 188
MS.gene61282.t1 AT4G18430 45.714 210 104 1 2 201 7 216 2.12e-60 188
MS.gene61282.t1 AT3G07410 48.309 207 96 3 6 201 10 216 2.49e-60 188
MS.gene61282.t1 AT5G59150 42.723 213 111 1 1 202 5 217 2.93e-60 187
MS.gene61282.t1 AT1G16920 47.596 208 100 2 4 202 9 216 3.07e-60 187
MS.gene61282.t1 AT1G06400 45.238 210 106 2 2 202 7 216 4.17e-60 187
MS.gene61282.t1 AT4G39990 46.190 210 99 4 6 202 15 223 4.33e-60 187
MS.gene61282.t1 AT2G33870 46.919 211 99 3 4 202 9 218 1.60e-59 186
MS.gene61282.t1 AT5G47960 44.186 215 107 3 1 202 8 222 3.22e-59 185
MS.gene61282.t1 AT5G65270 45.540 213 99 5 6 202 15 226 6.42e-59 184
MS.gene61282.t1 AT4G18800 45.673 208 106 2 2 202 7 214 1.07e-58 184
MS.gene61282.t1 AT1G05810 44.231 208 105 2 6 202 10 217 4.98e-56 177
MS.gene61282.t1 AT1G43890 54.438 169 74 3 3 169 8 175 5.63e-56 177
MS.gene61282.t1 AT1G43890 54.438 169 74 3 3 169 8 175 5.63e-56 177
MS.gene61282.t1 AT1G43890 54.438 169 74 3 3 169 8 175 5.63e-56 177
MS.gene61282.t1 AT1G05810 44.231 208 105 2 6 202 56 263 1.04e-55 177
MS.gene61282.t1 AT5G03530 48.515 202 98 4 5 201 10 210 1.95e-55 175
MS.gene61282.t1 AT5G03530 48.515 202 98 4 5 201 10 210 1.95e-55 175
MS.gene61282.t1 AT2G43130 44.608 204 105 2 6 201 10 213 2.36e-55 175
MS.gene61282.t1 AT3G12160 42.654 211 109 2 2 200 9 219 4.64e-55 174
MS.gene61282.t1 AT1G18200 46.798 203 98 1 2 194 7 209 7.92e-55 174
MS.gene61282.t1 AT1G73640 48.691 191 93 2 4 190 9 198 9.22e-54 172
MS.gene61282.t1 AT2G31680 43.062 209 107 2 6 202 10 218 1.09e-53 171
MS.gene61282.t1 AT1G01200 43.781 201 110 2 1 198 21 221 1.67e-51 166
MS.gene61282.t1 AT4G19640 41.969 193 107 2 10 201 12 200 2.79e-48 157
MS.gene61282.t1 AT5G45130 41.538 195 105 4 10 201 12 200 4.06e-46 151
MS.gene61282.t1 AT3G54840 43.353 173 92 3 10 181 35 202 9.37e-45 147
MS.gene61282.t1 AT3G09910 45.405 185 97 4 5 187 10 192 1.14e-44 147
MS.gene61282.t1 AT3G09910 45.405 185 97 4 5 187 10 192 1.14e-44 147
MS.gene61282.t1 AT5G45130 40.933 193 105 4 12 201 22 208 1.58e-44 147
MS.gene61282.t1 AT2G44610 37.879 198 118 1 9 201 10 207 2.05e-44 147
MS.gene61282.t1 AT3G09910 44.500 200 105 4 5 202 10 205 2.33e-44 147
MS.gene61282.t1 AT3G09910 44.500 200 105 4 5 202 10 205 2.33e-44 147
MS.gene61282.t1 AT3G09910 44.500 200 105 4 5 202 10 205 2.33e-44 147
MS.gene61282.t1 AT3G54840 43.023 172 92 3 11 181 2 168 2.37e-44 145
MS.gene61282.t1 AT3G54840 44.805 154 84 1 10 162 35 188 5.85e-44 145
MS.gene61282.t1 AT4G35860 42.105 171 73 2 50 201 2 165 1.34e-42 141
MS.gene61282.t1 AT2G22290 38.191 199 115 3 9 201 10 206 6.04e-42 140
MS.gene61282.t1 AT5G10260 36.041 197 121 1 9 200 10 206 5.92e-41 138
MS.gene61282.t1 AT1G52280 39.500 200 110 5 8 199 8 204 8.68e-41 137
MS.gene61282.t1 AT4G39890 41.975 162 93 1 9 169 10 171 1.07e-40 137
MS.gene61282.t1 AT5G59150 39.634 164 88 1 50 202 3 166 1.66e-40 135
MS.gene61282.t1 AT3G18820 42.857 168 89 3 8 168 8 175 3.01e-40 136
MS.gene61282.t1 AT3G16100 38.500 200 112 5 8 199 8 204 1.34e-39 134
MS.gene61282.t1 AT5G64990 39.759 166 100 0 9 174 8 173 1.85e-38 132
MS.gene61282.t1 AT4G19640 45.802 131 71 0 10 140 12 142 1.96e-37 129
MS.gene61282.t1 AT1G49300 37.000 200 115 5 8 199 8 204 3.19e-37 129
MS.gene61282.t1 AT1G49300 37.000 200 115 5 8 199 8 204 3.19e-37 129
MS.gene61282.t1 AT2G21880 39.157 166 94 3 8 166 9 174 1.50e-36 127
MS.gene61282.t1 AT4G19640 46.400 125 67 0 10 134 12 136 2.07e-36 124
MS.gene61282.t1 AT5G64990 38.150 173 100 1 9 174 8 180 1.13e-35 125
MS.gene61282.t1 AT1G22740 35.784 204 109 5 8 199 8 201 1.52e-35 124
MS.gene61282.t1 AT4G09720 39.759 166 93 3 8 166 8 173 6.89e-34 120
MS.gene61282.t1 AT4G09720 37.427 171 95 3 8 166 8 178 7.14e-32 115
MS.gene61282.t1 AT5G39620 40.000 165 92 4 9 166 6 170 1.65e-31 114
MS.gene61282.t1 AT4G09720 36.158 177 95 3 8 166 8 184 6.85e-31 112
MS.gene61282.t1 AT2G21880 40.146 137 75 3 37 166 13 149 1.02e-28 106
MS.gene61282.t1 AT2G21880 40.146 137 75 3 37 166 13 149 1.02e-28 106
MS.gene61282.t1 AT2G21880 34.337 166 94 4 8 166 9 166 1.15e-26 101
MS.gene61282.t1 AT4G09720 40.876 137 74 3 37 166 3 139 2.32e-26 99.8
MS.gene61282.t1 AT4G09720 40.876 137 74 3 37 166 3 139 2.32e-26 99.8
MS.gene61282.t1 AT4G09720 40.876 137 74 3 37 166 3 139 2.32e-26 99.8
MS.gene61282.t1 AT2G44690 34.132 167 96 5 8 162 18 182 4.00e-25 97.8
MS.gene61282.t1 AT4G35020 33.728 169 98 5 8 164 6 172 1.20e-24 96.3
MS.gene61282.t1 AT4G35020 33.728 169 98 5 8 164 6 172 1.20e-24 96.3
MS.gene61282.t1 AT4G35020 33.728 169 98 5 8 164 6 172 1.20e-24 96.3
MS.gene61282.t1 AT5G55190 30.435 184 119 4 9 188 14 192 2.65e-24 95.9
MS.gene61282.t1 AT4G28950 33.333 165 98 5 8 162 6 168 2.91e-24 95.5
MS.gene61282.t1 AT5G20020 28.796 191 129 3 9 195 14 201 3.79e-24 95.5
MS.gene61282.t1 AT5G55080 30.864 162 107 4 9 169 14 171 3.92e-24 95.5
MS.gene61282.t1 AT5G20010 31.056 161 108 2 9 169 14 171 4.99e-24 95.1
MS.gene61282.t1 AT3G51300 32.934 167 98 5 10 164 8 172 1.21e-23 93.6
MS.gene61282.t1 AT1G75840 32.544 169 100 5 8 164 6 172 3.53e-23 92.0
MS.gene61282.t1 AT2G17800 32.544 169 100 5 8 164 6 172 6.68e-23 91.7
MS.gene61282.t1 AT2G17800 32.544 169 100 5 8 164 6 172 6.68e-23 91.7
MS.gene61282.t1 AT4G35950 32.544 169 100 5 8 164 6 172 9.68e-23 91.3
MS.gene61282.t1 AT5G45970 30.539 167 102 5 8 162 6 170 4.60e-22 89.4
MS.gene61282.t1 AT5G46025 40.187 107 63 1 70 175 6 112 5.85e-22 86.7
MS.gene61282.t1 AT1G20090 31.361 169 102 5 8 164 5 171 1.33e-21 88.2
MS.gene61282.t1 AT3G48040 30.178 169 104 5 8 164 8 174 1.09e-20 85.9
MS.gene61282.t1 AT5G62880 29.885 174 108 5 8 169 8 179 6.44e-20 84.0
MS.gene61282.t1 AT3G48040 33.333 123 79 3 8 129 8 128 3.88e-19 81.3
MS.gene61282.t1 AT5G62880 34.146 123 78 3 8 129 8 128 5.94e-19 80.9
MS.gene61282.t1 AT4G35020 35.965 114 70 3 10 122 8 119 2.39e-18 78.2
MS.gene61282.t1 AT4G35020 35.965 114 70 3 10 122 8 119 2.39e-18 78.2
MS.gene61282.t1 AT5G67560 33.962 159 95 5 9 162 20 173 3.76e-14 68.2
MS.gene61282.t1 AT5G37680 34.058 138 81 4 9 145 20 148 4.04e-14 68.2
MS.gene61282.t1 AT3G49870 31.609 174 99 6 9 172 1 164 4.78e-14 67.4
MS.gene61282.t1 AT3G51290 32.394 142 82 5 35 164 634 773 4.93e-14 70.5
MS.gene61282.t1 AT3G49870 32.759 174 97 7 9 172 20 183 1.54e-13 66.2
MS.gene61282.t1 AT3G22950 31.298 131 76 5 1 127 12 132 1.54e-11 60.8
MS.gene61282.t1 AT3G22950 31.298 131 76 5 1 127 12 132 1.54e-11 60.8
MS.gene61282.t1 AT3G49860 28.205 156 104 4 9 160 12 163 1.87e-11 60.5
MS.gene61282.t1 AT5G37680 35.780 109 60 4 38 145 2 101 3.44e-11 58.9

Find 46 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTGGTTGTCCTCGAATT+TGG 0.168291 8.2:+22731126 None:intergenic
ACTTACAATTTGAAGTTTAA+TGG 0.206147 8.2:+22732317 None:intergenic
CCTCGAATTTGGACTGTTGC+AGG 0.237144 8.2:+22731137 None:intergenic
CAGGCATTTGCAGATGAAAT+TGG 0.240708 8.2:-22731417 MS.gene61282:CDS
CTGCTGGTCAAGAACGTTTC+CGG 0.274066 8.2:-22731843 MS.gene61282:CDS
AGAGTTGAGACTTACTATTC+AGG 0.317299 8.2:+22734573 None:intergenic
TGAAATTGGAATTCCTTTCA+TGG 0.332549 8.2:-22731403 MS.gene61282:CDS
CAATGTGGAACAAGCTTTCA+TGG 0.386569 8.2:-22731358 MS.gene61282:CDS
TAACATTGTTAAAGCTCTCT+TGG 0.389666 8.2:+22731664 None:intergenic
ACGAGCAGCAACCAGCCTTC+TGG 0.395079 8.2:+22731102 None:intergenic
GCAGGCCTGGCACTGTTGGC+AGG 0.403801 8.2:+22731155 None:intergenic
AATTTGGACTGTTGCAGGCC+TGG 0.409513 8.2:+22731142 None:intergenic
AATGTTAACAAGCTTCTAGT+TGG 0.417837 8.2:-22731603 MS.gene61282:CDS
TGTTGCAGGCCTGGCACTGT+TGG 0.432139 8.2:+22731151 None:intergenic
CAACCAGCCTTCTGGTTCAC+TGG 0.436527 8.2:+22731110 None:intergenic
GAAAATCCGCACTGTTGAGC+AGG 0.471772 8.2:-22732349 MS.gene61282:CDS
GTCAACCTGCCAACAGTGCC+AGG 0.473985 8.2:-22731160 MS.gene61282:CDS
AGCTACTATCGTGGGGCTCA+TGG 0.480037 8.2:-22731808 MS.gene61282:CDS
GAAAGCTTGTTCCACATTGG+AGG 0.502915 8.2:+22731362 None:intergenic
TTGATTGGAGATTCTGGTGT+GGG 0.506444 8.2:-22733014 MS.gene61282:CDS
ATTGTATAGTGGGACACTGC+TGG 0.512939 8.2:-22731859 MS.gene61282:intron
TCCGCACTGTTGAGCAGGAT+GGG 0.520866 8.2:-22732344 MS.gene61282:CDS
TTAGCACTAGTTTCCATGAA+AGG 0.524383 8.2:+22731390 None:intergenic
ATCCGCACTGTTGAGCAGGA+TGG 0.528930 8.2:-22732345 MS.gene61282:CDS
AATCACCTTTGCTGTTTCAG+AGG 0.533991 8.2:+22731545 None:intergenic
AGTAGCTGCTAGTTATAGTC+CGG 0.542099 8.2:+22731824 None:intergenic
TAACTAGCAGCTACTATCGT+GGG 0.548282 8.2:-22731816 MS.gene61282:CDS
GACAGCTATATCAGTACCAT+CGG 0.567693 8.2:-22732472 MS.gene61282:CDS
CAGAACTTACAGCAAACCTC+AGG 0.568006 8.2:+22732976 None:intergenic
TGGAAACAAGAGCGATCTCT+CGG 0.568213 8.2:-22731583 MS.gene61282:CDS
GCAAGTCATGTCTCCTCCTG+AGG 0.576917 8.2:-22732992 MS.gene61282:CDS
TGGTACTGATATAGCTGTCA+AGG 0.577148 8.2:+22732476 None:intergenic
CCTGCAACAGTCCAAATTCG+AGG 0.584589 8.2:-22731137 MS.gene61282:CDS
CATGAAAGCTTGTTCCACAT+TGG 0.594293 8.2:+22731359 None:intergenic
CAACCAGTGAACCAGAAGGC+TGG 0.595916 8.2:-22731113 MS.gene61282:CDS
GGAACAAGCTTTCATGGCCA+TGG 0.601950 8.2:-22731352 MS.gene61282:CDS
GTTGATTGGAGATTCTGGTG+TGG 0.609925 8.2:-22733015 MS.gene61282:CDS
AACTTACAGCAAACCTCAGG+AGG 0.618028 8.2:+22732979 None:intergenic
ATAACTAGCAGCTACTATCG+TGG 0.626182 8.2:-22731817 MS.gene61282:CDS
GCTTACAAAGTCCACTCCGA+TGG 0.633467 8.2:+22732456 None:intergenic
GCTTTAACAATGTTAAGCAG+TGG 0.636327 8.2:-22731656 MS.gene61282:CDS
TGTGTCCTCTGAAACAGCAA+AGG 0.645238 8.2:-22731550 MS.gene61282:intron
TCCCATCCTGCTCAACAGTG+CGG 0.647894 8.2:+22732343 None:intergenic
AACTAGCAGCTACTATCGTG+GGG 0.674225 8.2:-22731815 MS.gene61282:CDS
CTATATCAGTACCATCGGAG+TGG 0.681244 8.2:-22732467 MS.gene61282:CDS
AGGACAACCAGTGAACCAGA+AGG 0.685270 8.2:-22731117 MS.gene61282:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAACAG+AGG + chr8.2:22732728-22732747 None:intergenic 10.0%
!! AAAATGTAATAGTAAAAAAT+GGG + chr8.2:22732807-22732826 None:intergenic 10.0%
!!! AAGAATCATAATTATTTTAT+GGG + chr8.2:22732449-22732468 None:intergenic 10.0%
!!! ATTAAAATTTAAAATAAGAC+AGG + chr8.2:22731190-22731209 None:intergenic 10.0%
!! ACATCAAAATATTAGATTAA+AGG + chr8.2:22734222-22734241 None:intergenic 15.0%
!! GAAAATGTAATAGTAAAAAA+TGG + chr8.2:22732808-22732827 None:intergenic 15.0%
!! TAGGTTTAAAAATTTATTAG+AGG - chr8.2:22731844-22731863 MS.gene61282:CDS 15.0%
!!! CAAGAATCATAATTATTTTA+TGG + chr8.2:22732450-22732469 None:intergenic 15.0%
!!! CTTTTTAAAATTTTTTTTGC+AGG - chr8.2:22733970-22733989 MS.gene61282:intron 15.0%
!!! TCATTTTCTCAAATTATTAT+CGG + chr8.2:22731579-22731598 None:intergenic 15.0%
!!! TTGTTTTATGATTGAATTTA+GGG - chr8.2:22731673-22731692 MS.gene61282:CDS 15.0%
!!! TTTTAAACCTATTAACTTTA+GGG + chr8.2:22731835-22731854 None:intergenic 15.0%
!!! TTTTTAAACCTATTAACTTT+AGG + chr8.2:22731836-22731855 None:intergenic 15.0%
!! AACATGGAAATAAGTTTAAA+TGG + chr8.2:22733258-22733277 None:intergenic 20.0%
!! AACTAAACATGATAACTAAA+CGG + chr8.2:22731391-22731410 None:intergenic 20.0%
!! AATAACATCATATCTTTGAT+TGG - chr8.2:22732596-22732615 MS.gene61282:intron 20.0%
!! ACTTCATAAAATATCATTCA+AGG + chr8.2:22733127-22733146 None:intergenic 20.0%
!! AGTTGAATATAAAGAACATA+TGG - chr8.2:22732834-22732853 MS.gene61282:intron 20.0%
!! ATAACATCATATCTTTGATT+GGG - chr8.2:22732597-22732616 MS.gene61282:intron 20.0%
!! ATAAGTTTAAATGGTAGATA+TGG + chr8.2:22733249-22733268 None:intergenic 20.0%
!! CAAAATATTAGATTAAAGGA+AGG + chr8.2:22734218-22734237 None:intergenic 20.0%
!! TATGTTAAAAAATGTTGTAC+AGG - chr8.2:22731983-22732002 MS.gene61282:intron 20.0%
!! TGGTATATCCTTATAAAATA+AGG - chr8.2:22732252-22732271 MS.gene61282:intron 20.0%
!! TTATATGTCCATTTGATAAA+TGG - chr8.2:22733608-22733627 MS.gene61282:intron 20.0%
!! TTCTTAAAATTGATACACAT+GGG - chr8.2:22731535-22731554 MS.gene61282:intron 20.0%
!! TTGATTTCCTAATATTCAAT+GGG + chr8.2:22733709-22733728 None:intergenic 20.0%
!! TTTAGATGTAGAAAACAAAT+TGG + chr8.2:22733472-22733491 None:intergenic 20.0%
!! TTTCTTAAAATTGATACACA+TGG - chr8.2:22731534-22731553 MS.gene61282:intron 20.0%
!!! AACATTCTCCTTATTTTATA+AGG + chr8.2:22732263-22732282 None:intergenic 20.0%
!!! ACTTACAATTTGAAGTTTAA+TGG + chr8.2:22733362-22733381 None:intergenic 20.0%
!!! ATTGATTTCCTAATATTCAA+TGG + chr8.2:22733710-22733729 None:intergenic 20.0%
!!! GCATTTTTTTATTGTATAGT+GGG - chr8.2:22733807-22733826 MS.gene61282:intron 20.0%
!!! GTTGTTTTATGATTGAATTT+AGG - chr8.2:22731672-22731691 MS.gene61282:CDS 20.0%
!!! TGCATTTTTTTATTGTATAG+TGG - chr8.2:22733806-22733825 MS.gene61282:intron 20.0%
!!! TTGAATGATATTTTATGAAG+TGG - chr8.2:22733126-22733145 MS.gene61282:intron 20.0%
!!! TTTAAATCGAAATTTTGTCT+TGG + chr8.2:22732386-22732405 None:intergenic 20.0%
!!! TTTACTTTTTATCTTATGCA+TGG - chr8.2:22731289-22731308 MS.gene61282:intron 20.0%
!!! TTTTTTTCCTTCTTTAGTTA+TGG - chr8.2:22732742-22732761 MS.gene61282:intron 20.0%
! AAAACAACACTTATGAATGA+AGG + chr8.2:22731660-22731679 None:intergenic 25.0%
! AAAGTTACCCATTGAATATT+AGG - chr8.2:22733699-22733718 MS.gene61282:intron 25.0%
! AATACTGAACAAGTTGTTAT+TGG - chr8.2:22733406-22733425 MS.gene61282:intron 25.0%
! AATCAATTTCTTGTCTTCAT+TGG - chr8.2:22732232-22732251 MS.gene61282:intron 25.0%
! ATAGTCACTGAAAATAAGAT+AGG + chr8.2:22732627-22732646 None:intergenic 25.0%
! ATTATAGACTAGAACTCATT+TGG - chr8.2:22732510-22732529 MS.gene61282:intron 25.0%
! CATATTCATTGATCTATCTA+TGG + chr8.2:22731788-22731807 None:intergenic 25.0%
! CATTTGAACAGTATTATTTG+AGG - chr8.2:22733672-22733691 MS.gene61282:intron 25.0%
! GTAAATGAGGTTAATAATCA+AGG + chr8.2:22734464-22734483 None:intergenic 25.0%
! TAAATGATGTCCTATATATG+TGG - chr8.2:22732084-22732103 MS.gene61282:intron 25.0%
! TAACATCATATCTTTGATTG+GGG - chr8.2:22732598-22732617 MS.gene61282:intron 25.0%
! TACTAAAGTTGAAAACAACA+TGG + chr8.2:22733274-22733293 None:intergenic 25.0%
! TATGGAATTTCTGTATGTAA+AGG - chr8.2:22734367-22734386 MS.gene61282:intron 25.0%
! TTATAGACTAGAACTCATTT+GGG - chr8.2:22732511-22732530 MS.gene61282:intron 25.0%
!! AAATGAGTTCTAGTCTATAA+TGG + chr8.2:22732511-22732530 None:intergenic 25.0%
!! AATGATATTTTATGAAGTGG+AGG - chr8.2:22733129-22733148 MS.gene61282:intron 25.0%
!! AATTGTGAGTCTTTTTAAAC+CGG - chr8.2:22733894-22733913 MS.gene61282:intron 25.0%
!! AATTTCCTTTTCAAACACTT+CGG - chr8.2:22733727-22733746 MS.gene61282:intron 25.0%
!! AGAGATGTTCAATTTTCATA+AGG - chr8.2:22731463-22731482 MS.gene61282:intron 25.0%
!! ATTCTCTTTAGGAAAAAGAT+AGG - chr8.2:22732565-22732584 MS.gene61282:intron 25.0%
!! ATTGGCAAGCTTTTATAAAA+AGG - chr8.2:22732319-22732338 MS.gene61282:intron 25.0%
!! ATTTCCTTTTTACATTGTCT+TGG - chr8.2:22733930-22733949 MS.gene61282:intron 25.0%
!! TATCTTTTTCCTAAAGAGAA+TGG + chr8.2:22732566-22732585 None:intergenic 25.0%
!! TTATAAAAGCTTGCCAATTT+TGG + chr8.2:22732317-22732336 None:intergenic 25.0%
!! TTTCCTTTTTACATTGTCTT+GGG - chr8.2:22733931-22733950 MS.gene61282:intron 25.0%
!! TTTTTAACATATATCCCACA+TGG + chr8.2:22731974-22731993 None:intergenic 25.0%
!! TTTTTCTTTTTCTGTGAAAC+AGG - chr8.2:22733167-22733186 MS.gene61282:intron 25.0%
!!! AGGAAAGAATTAATTTGTGA+CGG + chr8.2:22731170-22731189 None:intergenic 25.0%
AAAAAAAATGTCACTGGAAG+TGG + chr8.2:22734191-22734210 None:intergenic 30.0%
AAAAAAATGTCACTGGAAGT+GGG + chr8.2:22734190-22734209 None:intergenic 30.0%
AAAAAATGTTGTACAGGTCA+TGG - chr8.2:22731989-22732008 MS.gene61282:intron 30.0%
AAAAAGGAAATTGCTGACAA+AGG + chr8.2:22733921-22733940 None:intergenic 30.0%
AAAAATGTTGTACAGGTCAT+GGG - chr8.2:22731990-22732009 MS.gene61282:intron 30.0%
AAAAGGAAATTGCTGACAAA+GGG + chr8.2:22733920-22733939 None:intergenic 30.0%
AAATGATCCAAGAACACAAT+TGG + chr8.2:22733657-22733676 None:intergenic 30.0%
AAGATGACCATAACTAAAGA+AGG + chr8.2:22732752-22732771 None:intergenic 30.0%
AATGTTAACAAGCTTCTAGT+TGG - chr8.2:22734073-22734092 MS.gene61282:intron 30.0%
ATGATGTCTTGAGTAAAATG+TGG - chr8.2:22731805-22731824 MS.gene61282:CDS 30.0%
ATTGGTTAAGCAACCAAAAT+TGG - chr8.2:22732301-22732320 MS.gene61282:intron 30.0%
GCTGAAATTAAAAACAGGTA+TGG - chr8.2:22734349-22734368 MS.gene61282:intron 30.0%
GGACTTAAAAAAAATGTCAC+TGG + chr8.2:22734197-22734216 None:intergenic 30.0%
TAAAATTGATACACATGGGA+TGG - chr8.2:22731539-22731558 MS.gene61282:intron 30.0%
TAACATTGTTAAAGCTCTCT+TGG + chr8.2:22734015-22734034 None:intergenic 30.0%
TCCTCAAATAAAACTTCTCA+TGG + chr8.2:22733562-22733581 None:intergenic 30.0%
TCTTGACCATAAACAATGTA+AGG - chr8.2:22732948-22732967 MS.gene61282:intron 30.0%
TGAAATTGGAATTCCTTTCA+TGG - chr8.2:22734273-22734292 MS.gene61282:intron 30.0%
TTTCCCAAGACAATGTAAAA+AGG + chr8.2:22733937-22733956 None:intergenic 30.0%
! AATTGGTAACTGGAAAAACT+TGG + chr8.2:22733640-22733659 None:intergenic 30.0%
! CAGTATCTATTGACTAAACA+AGG + chr8.2:22734436-22734455 None:intergenic 30.0%
! GAAATACTTTTGTCCATTAG+AGG + chr8.2:22731933-22731952 None:intergenic 30.0%
! GAACATATGGATGTGTTTTT+AGG - chr8.2:22732847-22732866 MS.gene61282:intron 30.0%
! GTCTTTTGTAATCTTGTACT+GGG - chr8.2:22731903-22731922 MS.gene61282:intron 30.0%
! TAAACCTATTAACTTTAGGG+AGG + chr8.2:22731832-22731851 None:intergenic 30.0%
! TAACATTTTCACTTGCATAG+CGG + chr8.2:22734060-22734079 None:intergenic 30.0%
! TCTTTTGTAATCTTGTACTG+GGG - chr8.2:22731904-22731923 MS.gene61282:intron 30.0%
! TGGATTGTGAAATTTGTTCA+TGG - chr8.2:22731309-22731328 MS.gene61282:intron 30.0%
! TGTCTTTTGTAATCTTGTAC+TGG - chr8.2:22731902-22731921 MS.gene61282:intron 30.0%
! TTGATTATGTGATCCACTTT+TGG - chr8.2:22731435-22731454 MS.gene61282:intron 30.0%
! TTGTTCAAGCTTTTGTTGAT+TGG - chr8.2:22732647-22732666 MS.gene61282:intron 30.0%
!! ATTTTCTAAAGAAGGAAGCA+TGG + chr8.2:22733313-22733332 None:intergenic 30.0%
!! GGAAAGAATTAATTTGTGAC+GGG + chr8.2:22731169-22731188 None:intergenic 30.0%
!! TCTATAGTTTGTTTCTTCCA+CGG - chr8.2:22731727-22731746 MS.gene61282:intron 30.0%
!! TTAATTTGTGACGGGAAATT+TGG + chr8.2:22731161-22731180 None:intergenic 30.0%
!!! GTCATTTTTATGTGAGAAGA+AGG + chr8.2:22733058-22733077 None:intergenic 30.0%
!!! TCCATGAGAAGTTTTATTTG+AGG - chr8.2:22733558-22733577 MS.gene61282:intron 30.0%
ACATCTCTTGAAACCAAAAG+TGG + chr8.2:22731451-22731470 None:intergenic 35.0%
ACATTGTCTTGGGAAAACAA+TGG - chr8.2:22733941-22733960 MS.gene61282:intron 35.0%
AGAGTTGAGACTTACTATTC+AGG + chr8.2:22731106-22731125 None:intergenic 35.0%
AGATCCGTTTAATTAGTCGA+TGG - chr8.2:22731363-22731382 MS.gene61282:CDS 35.0%
ATGTACGATGCCACATATAT+AGG + chr8.2:22732097-22732116 None:intergenic 35.0%
CCATAAACAATGTAAGGTCA+AGG - chr8.2:22732954-22732973 MS.gene61282:intron 35.0%
CCTTGACCTTACATTGTTTA+TGG + chr8.2:22732957-22732976 None:intergenic 35.0%
CTATTTGTGGTTTGATCGAA+CGG - chr8.2:22733021-22733040 MS.gene61282:CDS 35.0%
GCAAAACATGACTGTCTAAA+AGG + chr8.2:22732126-22732145 None:intergenic 35.0%
GCTTTAACAATGTTAAGCAG+TGG - chr8.2:22734020-22734039 MS.gene61282:intron 35.0%
GGAATGAGCCATTTATCAAA+TGG + chr8.2:22733619-22733638 None:intergenic 35.0%
GTAAATGCATGTGAACTCTA+AGG - chr8.2:22731485-22731504 MS.gene61282:intron 35.0%
TAAACGGATCTAAATCAGCA+AGG + chr8.2:22731354-22731373 None:intergenic 35.0%
TATATGCACCAGAGAGTAAA+AGG - chr8.2:22732919-22732938 MS.gene61282:intron 35.0%
TGCATGACTTCAATCAATCT+AGG - chr8.2:22732045-22732064 MS.gene61282:intron 35.0%
TGGCTGCTGAAATTAAAAAC+AGG - chr8.2:22734344-22734363 MS.gene61282:intron 35.0%
! CCATTCTGTGAAAAAAGTAC+CGG + chr8.2:22734493-22734512 None:intergenic 35.0%
! GATTTACTCCTTTTACTCTC+TGG + chr8.2:22732930-22732949 None:intergenic 35.0%
! GGATCCATCGACTAATTAAA+CGG + chr8.2:22731370-22731389 None:intergenic 35.0%
! TTAGCACTAGTTTCCATGAA+AGG + chr8.2:22734289-22734308 None:intergenic 35.0%
!! AGGCATTGAAAAAGTGTGTA+TGG - chr8.2:22732867-22732886 MS.gene61282:intron 35.0%
!! CTCTGAGTTGAAAAAGCATT+CGG + chr8.2:22731704-22731723 None:intergenic 35.0%
!! CTTTTGTTGATTGGAGATTC+TGG - chr8.2:22732656-22732675 MS.gene61282:intron 35.0%
!! TATTGGTTCTGAACTCTGAT+GGG - chr8.2:22733423-22733442 MS.gene61282:intron 35.0%
!! TTATTGGTTCTGAACTCTGA+TGG - chr8.2:22733422-22733441 MS.gene61282:intron 35.0%
!!! GTTTTTAATTTCAGCAGCCA+TGG + chr8.2:22734344-22734363 None:intergenic 35.0%
AAAGCTAGTGAAGTCCATGT+GGG - chr8.2:22731957-22731976 MS.gene61282:intron 40.0%
AACACTTCGGCTCAATTATC+TGG - chr8.2:22733740-22733759 MS.gene61282:intron 40.0%
ACACTTCGGCTCAATTATCT+GGG - chr8.2:22733741-22733760 MS.gene61282:intron 40.0%
AGAGAATGGCCATAGCAAAA+TGG + chr8.2:22732552-22732571 None:intergenic 40.0%
AGTAGCTGCTAGTTATAGTC+CGG + chr8.2:22733855-22733874 None:intergenic 40.0%
ATAACTAGCAGCTACTATCG+TGG - chr8.2:22733859-22733878 MS.gene61282:intron 40.0%
CAATGTGGAACAAGCTTTCA+TGG - chr8.2:22734318-22734337 MS.gene61282:intron 40.0%
CAGAGTCACATCTCTATTTG+TGG - chr8.2:22733008-22733027 MS.gene61282:CDS 40.0%
CAGGCATTTGCAGATGAAAT+TGG - chr8.2:22734259-22734278 MS.gene61282:intron 40.0%
CCAGTTACCAATTGTGTTCT+TGG - chr8.2:22733647-22733666 MS.gene61282:intron 40.0%
GACAGCTATATCAGTACCAT+CGG - chr8.2:22733204-22733223 MS.gene61282:intron 40.0%
GAGAATGGCCATAGCAAAAT+GGG + chr8.2:22732551-22732570 None:intergenic 40.0%
GATAATGTAATCACGTGTGC+CGG - chr8.2:22731599-22731618 MS.gene61282:CDS 40.0%
GCAAATGCCTGATGTACAAA+AGG + chr8.2:22734250-22734269 None:intergenic 40.0%
TAAAGCTAGTGAAGTCCATG+TGG - chr8.2:22731956-22731975 MS.gene61282:intron 40.0%
TAACTAGCAGCTACTATCGT+GGG - chr8.2:22733860-22733879 MS.gene61282:intron 40.0%
TACATAGTGAGATTGTGAGC+AGG - chr8.2:22732895-22732914 MS.gene61282:intron 40.0%
TGCGCAGATCTAACTAAACA+AGG + chr8.2:22731226-22731245 None:intergenic 40.0%
TGCTAAAAATGCCTCCAATG+TGG - chr8.2:22734303-22734322 MS.gene61282:intron 40.0%
TGGAAGTGGGACATGTATAT+GGG + chr8.2:22734177-22734196 None:intergenic 40.0%
TGGTCCTCCCTAAAGTTAAT+AGG - chr8.2:22731825-22731844 MS.gene61282:CDS 40.0%
TTGATTGGAGATTCTGGTGT+GGG - chr8.2:22732662-22732681 MS.gene61282:intron 40.0%
TTGCTATGGCCATTCTCTTT+AGG - chr8.2:22732554-22732573 MS.gene61282:intron 40.0%
! CATGAAAGCTTGTTCCACAT+TGG + chr8.2:22734320-22734339 None:intergenic 40.0%
! CCAAGAACACAATTGGTAAC+TGG + chr8.2:22733650-22733669 None:intergenic 40.0%
! CTTATGAATGAAGGTGTGTC+TGG + chr8.2:22731651-22731670 None:intergenic 40.0%
! GTTTGTGCCTTTTGTACATC+AGG - chr8.2:22734240-22734259 MS.gene61282:intron 40.0%
! TTCTTCCACGGTTGGTATAA+GGG - chr8.2:22731739-22731758 MS.gene61282:intron 40.0%
! TTGAGCCGAAGTGTTTGAAA+AGG + chr8.2:22733735-22733754 None:intergenic 40.0%
! TTTCTTCCACGGTTGGTATA+AGG - chr8.2:22731738-22731757 MS.gene61282:intron 40.0%
!! AATCACCTTTGCTGTTTCAG+AGG + chr8.2:22734134-22734153 None:intergenic 40.0%
!! CAGTGCGGATTTTCTAAAGA+AGG + chr8.2:22733321-22733340 None:intergenic 40.0%
!! GGAGAAGTGTTAAGCAGAAA+AGG + chr8.2:22731140-22731159 None:intergenic 40.0%
!! TAGTTTGTTTCTTCCACGGT+TGG - chr8.2:22731731-22731750 MS.gene61282:intron 40.0%
!! TCATGTTTTGCTGTCTACTG+TGG - chr8.2:22732135-22732154 MS.gene61282:intron 40.0%
!! TGGTACTGATATAGCTGTCA+AGG + chr8.2:22733203-22733222 None:intergenic 40.0%
!!! CCGGTACTTTTTTCACAGAA+TGG - chr8.2:22734490-22734509 MS.gene61282:intron 40.0%
AACTAGCAGCTACTATCGTG+GGG - chr8.2:22733861-22733880 MS.gene61282:intron 45.0%
AACTTACAGCAAACCTCAGG+AGG + chr8.2:22732700-22732719 None:intergenic 45.0%
ACTCTCTCACTTGACAGTCA+AGG - chr8.2:22733076-22733095 MS.gene61282:intron 45.0%
AGATTGCTTAACTAGTGCCC+CGG - chr8.2:22732405-22732424 MS.gene61282:intron 45.0%
CAAAATGGGTGACTGTGACA+TGG + chr8.2:22732537-22732556 None:intergenic 45.0%
CAGAACTTACAGCAAACCTC+AGG + chr8.2:22732703-22732722 None:intergenic 45.0%
CTATATCAGTACCATCGGAG+TGG - chr8.2:22733209-22733228 MS.gene61282:intron 45.0%
CTGGAAGTGGGACATGTATA+TGG + chr8.2:22734178-22734197 None:intergenic 45.0%
GGAAGTGGGACATGTATATG+GGG + chr8.2:22734176-22734195 None:intergenic 45.0%
GTTGATTGGAGATTCTGGTG+TGG - chr8.2:22732661-22732680 MS.gene61282:intron 45.0%
TAACCTCATTTACTCGTCGC+CGG - chr8.2:22734471-22734490 MS.gene61282:intron 45.0%
TGGAAACAAGAGCGATCTCT+CGG - chr8.2:22734093-22734112 MS.gene61282:intron 45.0%
TGTACTGGGGAATCCTCTAA+TGG - chr8.2:22731917-22731936 MS.gene61282:intron 45.0%
! ATTGTATAGTGGGACACTGC+TGG - chr8.2:22733817-22733836 MS.gene61282:intron 45.0%
! CACAGTCACCCATTTTGCTA+TGG - chr8.2:22732540-22732559 MS.gene61282:intron 45.0%
! GAAAGCTTGTTCCACATTGG+AGG + chr8.2:22734317-22734336 None:intergenic 45.0%
! TCACTGGTTGTCCTCGAATT+TGG + chr8.2:22734553-22734572 None:intergenic 45.0%
! TCGGCTCAATTATCTGGGAT+TGG - chr8.2:22733746-22733765 MS.gene61282:intron 45.0%
! TCTTCCACGGTTGGTATAAG+GGG - chr8.2:22731740-22731759 MS.gene61282:intron 45.0%
!! GAACTCTAAGGTCTCTGTGA+TGG - chr8.2:22731497-22731516 MS.gene61282:intron 45.0%
!! TGTGTCCTCTGAAACAGCAA+AGG - chr8.2:22734126-22734145 MS.gene61282:intron 45.0%
AATTTGGACTGTTGCAGGCC+TGG + chr8.2:22734537-22734556 None:intergenic 50.0%
AGATCCCCTTATACCAACCG+TGG + chr8.2:22731747-22731766 None:intergenic 50.0%
AGGACAACCAGTGAACCAGA+AGG - chr8.2:22734559-22734578 MS.gene61282:intron 50.0%
ATTGCTTAACTAGTGCCCCG+GGG - chr8.2:22732407-22732426 MS.gene61282:intron 50.0%
CCTCGAATTTGGACTGTTGC+AGG + chr8.2:22734542-22734561 None:intergenic 50.0%
CCTGCAACAGTCCAAATTCG+AGG - chr8.2:22734539-22734558 MS.gene61282:intron 50.0%
CTGCTGGTCAAGAACGTTTC+CGG - chr8.2:22733833-22733852 MS.gene61282:intron 50.0%
GAAAATCCGCACTGTTGAGC+AGG - chr8.2:22733327-22733346 MS.gene61282:intron 50.0%
GATTGCTTAACTAGTGCCCC+GGG - chr8.2:22732406-22732425 MS.gene61282:intron 50.0%
GCTTACAAAGTCCACTCCGA+TGG + chr8.2:22733223-22733242 None:intergenic 50.0%
GGAAATTGCTGACAAAGGGC+CGG + chr8.2:22733916-22733935 None:intergenic 50.0%
GGAACAAGCTTTCATGGCCA+TGG - chr8.2:22734324-22734343 MS.gene61282:intron 50.0%
TCTTGTTAACCAATGCCCCC+GGG + chr8.2:22732426-22732445 None:intergenic 50.0%
TGGTTGCTTAACCAATGCCC+CGG + chr8.2:22732297-22732316 None:intergenic 50.0%
! GTCTTGTTAACCAATGCCCC+CGG + chr8.2:22732427-22732446 None:intergenic 50.0%
!! GCGCATTCGTTGTTTTGCGA+TGG - chr8.2:22731241-22731260 MS.gene61282:intron 50.0%
AGAATGTTAACCCGTGCCCC+CGG - chr8.2:22732275-22732294 MS.gene61282:intron 55.0%
AGCTACTATCGTGGGGCTCA+TGG - chr8.2:22733868-22733887 MS.gene61282:intron 55.0%
ATCCGCACTGTTGAGCAGGA+TGG - chr8.2:22733331-22733350 MS.gene61282:intron 55.0%
CAACCAGTGAACCAGAAGGC+TGG - chr8.2:22734563-22734582 MS.gene61282:intron 55.0%
CTTGTTAACCAATGCCCCCG+GGG + chr8.2:22732425-22732444 None:intergenic 55.0%
GCAAGTCATGTCTCCTCCTG+AGG - chr8.2:22732684-22732703 MS.gene61282:intron 55.0%
GGTTGCTTAACCAATGCCCC+GGG + chr8.2:22732296-22732315 None:intergenic 55.0%
GTCTGGTGTCCTACACATGC+CGG + chr8.2:22731634-22731653 None:intergenic 55.0%
GTTGCTTAACCAATGCCCCG+GGG + chr8.2:22732295-22732314 None:intergenic 55.0%
TCCCATCCTGCTCAACAGTG+CGG + chr8.2:22733336-22733355 None:intergenic 55.0%
TCCGCACTGTTGAGCAGGAT+GGG - chr8.2:22733332-22733351 MS.gene61282:intron 55.0%
TTGCTTAACCAATGCCCCGG+GGG + chr8.2:22732294-22732313 None:intergenic 55.0%
TTGCTTAACTAGTGCCCCGG+GGG - chr8.2:22732408-22732427 MS.gene61282:intron 55.0%
! GTAATCACGTGTGCCGGTGT+CGG - chr8.2:22731605-22731624 MS.gene61282:CDS 55.0%
! GTACCGGCGACGAGTAAATG+AGG + chr8.2:22734477-22734496 None:intergenic 55.0%
!! CAACCAGCCTTCTGGTTCAC+TGG + chr8.2:22734569-22734588 None:intergenic 55.0%
AATGTTAACCCGTGCCCCCG+GGG - chr8.2:22732277-22732296 MS.gene61282:intron 60.0%
ACGAGCAGCAACCAGCCTTC+TGG + chr8.2:22734577-22734596 None:intergenic 60.0%
GAATGTTAACCCGTGCCCCC+GGG - chr8.2:22732276-22732295 MS.gene61282:intron 60.0%
GTCAACCTGCCAACAGTGCC+AGG - chr8.2:22734516-22734535 MS.gene61282:intron 60.0%
TGTCGGACACCGGCATGTGT+AGG - chr8.2:22731622-22731641 MS.gene61282:CDS 60.0%
TGTTGCAGGCCTGGCACTGT+TGG + chr8.2:22734528-22734547 None:intergenic 60.0%
CACATGCCGGTGTCCGACAC+CGG + chr8.2:22731621-22731640 None:intergenic 65.0%
TAACCAATGCCCCGGGGGCA+CGG + chr8.2:22732289-22732308 None:intergenic 65.0%
! AACTAGTGCCCCGGGGGCAT+TGG - chr8.2:22732414-22732433 MS.gene61282:intron 65.0%
GCAGGCCTGGCACTGTTGGC+AGG + chr8.2:22734524-22734543 None:intergenic 70.0%
! AACCAATGCCCCGGGGGCAC+GGG + chr8.2:22732288-22732307 None:intergenic 70.0%
! CGTGTGCCGGTGTCGGACAC+CGG - chr8.2:22731612-22731631 MS.gene61282:CDS 70.0%
AACCCGTGCCCCCGGGGCAT+TGG - chr8.2:22732283-22732302 MS.gene61282:intron 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 22731097 22734601 22731097 ID=MS.gene61282
chr8.2 mRNA 22731097 22734601 22731097 ID=MS.gene61282.t1;Parent=MS.gene61282
chr8.2 exon 22734588 22734601 22734588 ID=MS.gene61282.t1.exon1;Parent=MS.gene61282.t1
chr8.2 CDS 22734588 22734601 22734588 ID=cds.MS.gene61282.t1;Parent=MS.gene61282.t1
chr8.2 exon 22732986 22733058 22732986 ID=MS.gene61282.t1.exon2;Parent=MS.gene61282.t1
chr8.2 CDS 22732986 22733058 22732986 ID=cds.MS.gene61282.t1;Parent=MS.gene61282.t1
chr8.2 exon 22732462 22732509 22732462 ID=MS.gene61282.t1.exon3;Parent=MS.gene61282.t1
chr8.2 CDS 22732462 22732509 22732462 ID=cds.MS.gene61282.t1;Parent=MS.gene61282.t1
chr8.2 exon 22732323 22732370 22732323 ID=MS.gene61282.t1.exon4;Parent=MS.gene61282.t1
chr8.2 CDS 22732323 22732370 22732323 ID=cds.MS.gene61282.t1;Parent=MS.gene61282.t1
chr8.2 exon 22731801 22731872 22731801 ID=MS.gene61282.t1.exon5;Parent=MS.gene61282.t1
chr8.2 CDS 22731801 22731872 22731801 ID=cds.MS.gene61282.t1;Parent=MS.gene61282.t1
chr8.2 exon 22731551 22731706 22731551 ID=MS.gene61282.t1.exon6;Parent=MS.gene61282.t1
chr8.2 CDS 22731551 22731706 22731551 ID=cds.MS.gene61282.t1;Parent=MS.gene61282.t1
chr8.2 exon 22731333 22731436 22731333 ID=MS.gene61282.t1.exon7;Parent=MS.gene61282.t1
chr8.2 CDS 22731333 22731436 22731333 ID=cds.MS.gene61282.t1;Parent=MS.gene61282.t1
chr8.2 exon 22731097 22731190 22731097 ID=MS.gene61282.t1.exon8;Parent=MS.gene61282.t1
chr8.2 CDS 22731097 22731190 22731097 ID=cds.MS.gene61282.t1;Parent=MS.gene61282.t1
Gene Sequence

>MS.gene61282

ATGAATCCTGAATAGTAAGTCTCAACTCTATTTTCTGTTTCCTTTTCTGCTTAACACTTCTCCAAATTTCCCGTCACAAATTAATTCTTTCCTGTCTTATTTTAAATTTTAATTATTCTTATTCGACCTTGTTTAGTTAGATCTGCGCATTCGTTGTTTTGCGATGGTGAATTTTAGTGCTTTCTGAACTGTTTTACTTTTTATCTTATGCATGGATTGTGAAATTTGTTCATGGATCGTGTTTCTTCAAACTTCCTTGCTGATTTAGATCCGTTTAATTAGTCGATGGATCCGTTTAGTTATCATGTTTAGTTATTTTTAGTCTATTTTCTACATGTTTGATTATGTGATCCACTTTTGGTTTCAAGAGATGTTCAATTTTCATAAGGTAAATGCATGTGAACTCTAAGGTCTCTGTGATGGATATGACATGTGAATTTCTTAAAATTGATACACATGGGATGGCAATGTTTTATACACCGATAATAATTTGAGAAAATGAGATAATGTAATCACGTGTGCCGGTGTCGGACACCGGCATGTGTAGGACACCAGACACACCTTCATTCATAAGTGTTGTTTTATGATTGAATTTAGGGAGTGACCGAATGCTTTTTCAACTCAGAGATTTCTATAGTTTGTTTCTTCCACGGTTGGTATAAGGGGATCTTGAAGTTGAAGTTTTATTCCATAGATAGATCAATGAATATGATGTCTTGAGTAAAATGTGGTCCTCCCTAAAGTTAATAGGTTTAAAAATTTATTAGAGGCATTTTTTAGCTGAACTATTTCTGAAATTGATATGTGTCTTTTGTAATCTTGTACTGGGGAATCCTCTAATGGACAAAAGTATTTCGTGTAAAGCTAGTGAAGTCCATGTGGGATATATGTTAAAAAATGTTGTACAGGTCATGGGACAGTTTAATAAAGAAGAATGTGTTGTTTGTGTGCATGACTTCAATCAATCTAGGATTAATTAATTAATTATAAATGATGTCCTATATATGTGGCATCGTACATGCTATACCTTTTAGACAGTCATGTTTTGCTGTCTACTGTGGCAAACATGAGCTTGAGTTTTGCTGATTAGCTCGAACATGCATAGCATGATTGAATTATGCTTTTTGTCTACATGAATCAATTTCTTGTCTTCATTGGTATATCCTTATAAAATAAGGAGAATGTTAACCCGTGCCCCCGGGGCATTGGTTAAGCAACCAAAATTGGCAAGCTTTTATAAAAAGGTAGTGTATTTATTACTTCATTAAAAGTTAAAAGTTACATTTCCAAGACAAAATTTCGATTTAAAGATTGCTTAACTAGTGCCCCGGGGGCATTGGTTAACAAGACCCATAAAATAATTATGATTCTTGATTATTTTATAATAGATCAATGCTTATCAAAAGTTACTCCATTATAGACTAGAACTCATTTGGGCCATGTCACAGTCACCCATTTTGCTATGGCCATTCTCTTTAGGAAAAAGATAGGCATTGATTAATAACATCATATCTTTGATTGGGGCATCCTATCTTATTTTCAGTGACTATTTGTTCAAGCTTTTGTTGATTGGAGATTCTGGTGTGGGCAAGTCATGTCTCCTCCTGAGGTTTGCTGTAAGTTCTGAGCCTCTGTTTTTTTTTTTTTTTTTTCCTTCTTTAGTTATGGTCATCTTTTTTCAATTAATGAAAAATGAAATTGAATATTCCCATTTTTTACTATTACATTTTCATACAAAGTTGAATATAAAGAACATATGGATGTGTTTTTAGGCATTGAAAAAGTGTGTATGGTGTCATACATAGTGAGATTGTGAGCAGGCTATATGCACCAGAGAGTAAAAGGAGTAAATCTTGACCATAAACAATGTAAGGTCAAGGTTAAAAGCTTTTATTAGTCACTTCATTTTTTCAGAGTCACATCTCTATTTGTGGTTTGATCGAACGGCAAGATTTACTCCTTCTTCTCACATAAAAATGACTCTCTCACTTGACAGTCAAGGATGCAATGTCAAACAAAAGCTTTCACCTTGAATGATATTTTATGAAGTGGAGGTTACACTTCTTAATATTTTTCTTTTTCTGTGAAACAGGATGATTCATACCTTGACAGCTATATCAGTACCATCGGAGTGGACTTTGTAAGCATTCCATATCTACCATTTAAACTTATTTCCATGTTGTTTTCAACTTTAGTATGTGACTTGTTATTTACCATGCTTCCTTCTTTAGAAAATCCGCACTGTTGAGCAGGATGGGAAGACCATTAAACTTCAAATTGTAAGTCACTGACTAAGTTAATATTATTTGAATACTGAACAAGTTGTTATTGGTTCTGAACTCTGATGGGAGTTTTACACGAGTCTATCTATGCCAATTTGTTTTCTACATCTAAATTACGTTTTTGAGATTGTTTCAATTAGATGTACAAAAATCAATTTGAACATGCGTAGAAAAAATTATCCATGAGAAGTTTTATTTGAGGATATCTTTTTTTTTTTTTGAGTAATTATTATATGTCCATTTGATAAATGGCTCATTCCAAGTTTTTCCAGTTACCAATTGTGTTCTTGGATCATTTGAACAGTATTATTTGAGGTTATAAAGTTACCCATTGAATATTAGGAAATCAATTTCCTTTTCAAACACTTCGGCTCAATTATCTGGGATTGGTTCTTTACTGTATTCTGTAATTGTTGACAGATTTTTCTGCATTTTTTTATTGTATAGTGGGACACTGCTGGTCAAGAACGTTTCCGGACTATAACTAGCAGCTACTATCGTGGGGCTCATGGCATAATTGTGAGTCTTTTTAAACCGGCCCTTTGTCAGCAATTTCCTTTTTACATTGTCTTGGGAAAACAATGGTGTAATCTTTTTAAAATTTTTTTTGCAGGTTGTTTACGATGTCACTGACCAAGAGAGCTTTAACAATGTTAAGCAGTGGCTGAATGAAATTGACCGCTATGCAAGTGAAAATGTTAACAAGCTTCTAGTTGGAAACAAGAGCGATCTCTCGGACAAAAAAGTTGTGTCCTCTGAAACAGCAAAGGTGATTCTAAATTTGTTGATTTATGCCCCATATACATGTCCCACTTCCAGTGACATTTTTTTTAAGTCCTTCCTTTAATCTAATATTTTGATGTTTGTGCCTTTTGTACATCAGGCATTTGCAGATGAAATTGGAATTCCTTTCATGGAAACTAGTGCTAAAAATGCCTCCAATGTGGAACAAGCTTTCATGGCCATGGCTGCTGAAATTAAAAACAGGTATGGAATTTCTGTATGTAAAGGACAACTATTGAGCTTTTTGCATGAGTTTGTGAACTTCAAAGAACCTTGTTTAGTCAATAGATACTGATCTACCTTGATTATTAACCTCATTTACTCGTCGCCGGTACTTTTTTCACAGAATGGCGAGTCAACCTGCCAACAGTGCCAGGCCTGCAACAGTCCAAATTCGAGGACAACCAGTGAACCAGAAGGCTGGTTGCTGCTCGTCTTAG

Protein sequence

>MS.gene61282.t1

MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSARPATVQIRGQPVNQKAGCCSS