Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058973.t1 | XP_003590522.1 | 99.5 | 216 | 1 | 0 | 1 | 216 | 1 | 216 | 8.70E-115 | 422.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058973.t1 | O24466 | 89.8 | 216 | 22 | 0 | 1 | 216 | 1 | 216 | 2.3e-108 | 392.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058973.t1 | G7IBN4 | 99.5 | 216 | 1 | 0 | 1 | 216 | 1 | 216 | 6.3e-115 | 422.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058973.t1 | MTR_1g068730 | 99.537 | 216 | 1 | 0 | 1 | 216 | 1 | 216 | 1.83e-161 | 444 |
MS.gene058973.t1 | MTR_1g068740 | 99.074 | 216 | 2 | 0 | 1 | 216 | 1 | 216 | 6.76e-161 | 443 |
MS.gene058973.t1 | MTR_1g115325 | 91.220 | 205 | 18 | 0 | 11 | 215 | 11 | 215 | 1.26e-140 | 392 |
MS.gene058973.t1 | MTR_7g100020 | 94.175 | 206 | 12 | 0 | 11 | 216 | 11 | 216 | 1.58e-139 | 389 |
MS.gene058973.t1 | MTR_4g063160 | 87.440 | 207 | 23 | 2 | 11 | 215 | 11 | 216 | 1.06e-132 | 372 |
MS.gene058973.t1 | MTR_2g096550 | 75.926 | 216 | 48 | 3 | 1 | 215 | 1 | 213 | 6.99e-116 | 329 |
MS.gene058973.t1 | MTR_1g068740 | 98.582 | 141 | 2 | 0 | 1 | 141 | 1 | 141 | 3.13e-100 | 289 |
MS.gene058973.t1 | MTR_1g068730 | 97.872 | 141 | 3 | 0 | 1 | 141 | 1 | 141 | 4.70e-99 | 285 |
MS.gene058973.t1 | MTR_7g081700 | 61.353 | 207 | 71 | 4 | 11 | 216 | 4 | 202 | 6.67e-86 | 253 |
MS.gene058973.t1 | MTR_8g006970 | 59.314 | 204 | 77 | 2 | 13 | 216 | 20 | 217 | 7.89e-82 | 243 |
MS.gene058973.t1 | MTR_8g006970 | 65.882 | 170 | 57 | 1 | 11 | 180 | 4 | 172 | 1.15e-78 | 234 |
MS.gene058973.t1 | MTR_2g005500 | 53.555 | 211 | 86 | 4 | 8 | 215 | 2 | 203 | 1.70e-78 | 234 |
MS.gene058973.t1 | MTR_4g099470 | 53.846 | 182 | 73 | 4 | 37 | 216 | 6 | 178 | 1.00e-65 | 201 |
MS.gene058973.t1 | MTR_4g064897 | 42.523 | 214 | 117 | 3 | 7 | 216 | 4 | 215 | 3.30e-59 | 185 |
MS.gene058973.t1 | MTR_6g021790 | 44.498 | 209 | 109 | 3 | 12 | 214 | 3 | 210 | 2.49e-58 | 183 |
MS.gene058973.t1 | MTR_2g027660 | 44.976 | 209 | 107 | 3 | 12 | 213 | 3 | 210 | 4.43e-58 | 182 |
MS.gene058973.t1 | MTR_3g069510 | 45.070 | 213 | 104 | 5 | 10 | 214 | 7 | 214 | 8.15e-58 | 182 |
MS.gene058973.t1 | MTR_2g014990 | 45.413 | 218 | 106 | 5 | 7 | 216 | 5 | 217 | 1.09e-56 | 179 |
MS.gene058973.t1 | MTR_2g005510 | 42.654 | 211 | 115 | 2 | 11 | 216 | 11 | 220 | 1.20e-56 | 179 |
MS.gene058973.t1 | MTR_4g079350 | 45.662 | 219 | 104 | 5 | 7 | 216 | 5 | 217 | 2.27e-56 | 178 |
MS.gene058973.t1 | MTR_7g103070 | 47.115 | 208 | 98 | 5 | 12 | 214 | 13 | 213 | 5.50e-56 | 177 |
MS.gene058973.t1 | MTR_1g062760 | 48.558 | 208 | 94 | 6 | 12 | 214 | 11 | 210 | 5.66e-56 | 177 |
MS.gene058973.t1 | MTR_8g031660 | 43.062 | 209 | 107 | 3 | 12 | 214 | 3 | 205 | 1.02e-55 | 176 |
MS.gene058973.t1 | MTR_4g088090 | 44.292 | 219 | 107 | 5 | 7 | 216 | 5 | 217 | 1.62e-55 | 176 |
MS.gene058973.t1 | MTR_1g078200 | 42.453 | 212 | 111 | 2 | 13 | 214 | 12 | 222 | 1.63e-55 | 176 |
MS.gene058973.t1 | MTR_2g075950 | 50.292 | 171 | 84 | 1 | 7 | 177 | 5 | 174 | 9.13e-55 | 174 |
MS.gene058973.t1 | MTR_3g086980 | 41.589 | 214 | 117 | 4 | 8 | 214 | 9 | 221 | 8.00e-54 | 172 |
MS.gene058973.t1 | MTR_8g089985 | 41.667 | 216 | 109 | 4 | 13 | 216 | 15 | 225 | 1.31e-53 | 171 |
MS.gene058973.t1 | MTR_1g029450 | 45.933 | 209 | 100 | 7 | 11 | 214 | 13 | 213 | 3.06e-53 | 170 |
MS.gene058973.t1 | MTR_8g031870 | 48.485 | 165 | 84 | 1 | 14 | 178 | 5 | 168 | 4.16e-53 | 169 |
MS.gene058973.t1 | MTR_7g051940 | 43.627 | 204 | 111 | 3 | 14 | 214 | 12 | 214 | 5.05e-53 | 170 |
MS.gene058973.t1 | MTR_2g083860 | 48.538 | 171 | 87 | 1 | 7 | 177 | 5 | 174 | 5.83e-53 | 169 |
MS.gene058973.t1 | MTR_8g093740 | 44.811 | 212 | 103 | 8 | 8 | 214 | 6 | 208 | 7.12e-52 | 166 |
MS.gene058973.t1 | MTR_2g090865 | 42.453 | 212 | 112 | 3 | 11 | 216 | 7 | 214 | 7.71e-52 | 167 |
MS.gene058973.t1 | MTR_8g031680 | 41.905 | 210 | 112 | 5 | 12 | 214 | 3 | 209 | 1.48e-51 | 166 |
MS.gene058973.t1 | MTR_1g090717 | 44.240 | 217 | 112 | 6 | 1 | 214 | 1 | 211 | 2.48e-51 | 165 |
MS.gene058973.t1 | MTR_3g096350 | 44.976 | 209 | 101 | 7 | 11 | 214 | 8 | 207 | 3.02e-51 | 165 |
MS.gene058973.t1 | MTR_8g027220 | 46.061 | 165 | 88 | 1 | 13 | 177 | 24 | 187 | 2.45e-50 | 163 |
MS.gene058973.t1 | MTR_1g052475 | 39.720 | 214 | 115 | 4 | 13 | 215 | 13 | 223 | 4.44e-50 | 162 |
MS.gene058973.t1 | MTR_8g036220 | 42.439 | 205 | 112 | 3 | 13 | 213 | 14 | 216 | 6.23e-50 | 162 |
MS.gene058973.t1 | MTR_7g405790 | 40.097 | 207 | 117 | 4 | 14 | 214 | 14 | 219 | 1.45e-49 | 161 |
MS.gene058973.t1 | MTR_6g079550 | 40.291 | 206 | 118 | 2 | 13 | 214 | 10 | 214 | 4.68e-49 | 159 |
MS.gene058973.t1 | MTR_8g031830 | 48.718 | 156 | 79 | 1 | 14 | 169 | 5 | 159 | 5.37e-49 | 159 |
MS.gene058973.t1 | MTR_0262s0050 | 44.848 | 165 | 90 | 1 | 13 | 177 | 13 | 176 | 4.38e-47 | 155 |
MS.gene058973.t1 | MTR_3g064390 | 38.693 | 199 | 110 | 4 | 17 | 214 | 12 | 199 | 4.55e-46 | 151 |
MS.gene058973.t1 | MTR_8g103550 | 42.697 | 178 | 97 | 2 | 8 | 185 | 2 | 174 | 5.50e-46 | 151 |
MS.gene058973.t1 | MTR_1g094220 | 44.242 | 165 | 90 | 2 | 16 | 179 | 32 | 195 | 4.64e-45 | 149 |
MS.gene058973.t1 | MTR_5g076590 | 37.688 | 199 | 112 | 4 | 17 | 214 | 12 | 199 | 8.20e-45 | 148 |
MS.gene058973.t1 | MTR_8g107070 | 49.068 | 161 | 81 | 1 | 13 | 173 | 12 | 171 | 2.79e-44 | 149 |
MS.gene058973.t1 | MTR_2g005500 | 38.863 | 211 | 77 | 5 | 8 | 215 | 2 | 163 | 3.14e-44 | 145 |
MS.gene058973.t1 | MTR_1g094220 | 45.283 | 159 | 85 | 2 | 16 | 173 | 32 | 189 | 7.86e-44 | 146 |
MS.gene058973.t1 | MTR_1g094220 | 45.513 | 156 | 83 | 2 | 16 | 170 | 32 | 186 | 2.41e-43 | 145 |
MS.gene058973.t1 | MTR_1g094220 | 45.513 | 156 | 83 | 2 | 16 | 170 | 32 | 186 | 3.50e-43 | 145 |
MS.gene058973.t1 | MTR_7g117910 | 37.089 | 213 | 116 | 4 | 7 | 213 | 12 | 212 | 1.83e-42 | 142 |
MS.gene058973.t1 | MTR_2g102060 | 40.860 | 186 | 104 | 3 | 17 | 201 | 12 | 192 | 3.19e-41 | 139 |
MS.gene058973.t1 | MTR_3g096350 | 52.846 | 123 | 55 | 3 | 11 | 131 | 8 | 129 | 7.51e-41 | 136 |
MS.gene058973.t1 | MTR_8g090215 | 43.038 | 158 | 89 | 1 | 17 | 174 | 11 | 167 | 1.06e-40 | 138 |
MS.gene058973.t1 | MTR_4g069850 | 39.409 | 203 | 109 | 7 | 5 | 198 | 2 | 199 | 1.20e-40 | 138 |
MS.gene058973.t1 | MTR_3g096350 | 51.938 | 129 | 59 | 3 | 11 | 137 | 8 | 135 | 1.54e-40 | 136 |
MS.gene058973.t1 | MTR_3g087160 | 37.563 | 197 | 120 | 2 | 17 | 213 | 11 | 204 | 4.05e-39 | 134 |
MS.gene058973.t1 | MTR_5g013900 | 37.143 | 210 | 125 | 4 | 5 | 214 | 3 | 205 | 9.35e-39 | 133 |
MS.gene058973.t1 | MTR_8g093740 | 48.062 | 129 | 64 | 3 | 44 | 170 | 8 | 135 | 2.30e-38 | 131 |
MS.gene058973.t1 | MTR_7g103070 | 45.912 | 159 | 74 | 5 | 61 | 214 | 6 | 157 | 4.14e-38 | 130 |
MS.gene058973.t1 | MTR_4g098950 | 39.412 | 170 | 98 | 2 | 5 | 174 | 3 | 167 | 7.94e-38 | 130 |
MS.gene058973.t1 | MTR_8g092020 | 39.521 | 167 | 95 | 2 | 15 | 175 | 12 | 178 | 1.81e-36 | 127 |
MS.gene058973.t1 | MTR_2g101890 | 36.098 | 205 | 120 | 5 | 15 | 213 | 10 | 209 | 1.96e-36 | 127 |
MS.gene058973.t1 | MTR_4g012940 | 37.198 | 207 | 114 | 6 | 15 | 214 | 8 | 205 | 1.98e-36 | 127 |
MS.gene058973.t1 | MTR_1g097420 | 38.922 | 167 | 96 | 2 | 15 | 175 | 8 | 174 | 5.49e-35 | 123 |
MS.gene058973.t1 | MTR_6g039490 | 36.041 | 197 | 120 | 3 | 15 | 205 | 8 | 204 | 2.12e-34 | 122 |
MS.gene058973.t1 | MTR_3g064390 | 40.496 | 121 | 72 | 0 | 17 | 137 | 12 | 132 | 2.72e-31 | 112 |
MS.gene058973.t1 | MTR_1g097420 | 31.416 | 226 | 120 | 4 | 15 | 205 | 8 | 233 | 7.84e-29 | 108 |
MS.gene058973.t1 | MTR_4g088055 | 34.132 | 167 | 97 | 5 | 15 | 170 | 6 | 170 | 9.33e-27 | 102 |
MS.gene058973.t1 | MTR_4g073250 | 33.511 | 188 | 112 | 6 | 15 | 191 | 6 | 191 | 6.70e-26 | 99.8 |
MS.gene058973.t1 | MTR_2g090875 | 33.533 | 167 | 98 | 5 | 15 | 170 | 6 | 170 | 6.97e-26 | 99.8 |
MS.gene058973.t1 | MTR_1g059590 | 40.588 | 170 | 90 | 4 | 10 | 179 | 393 | 551 | 3.63e-25 | 102 |
MS.gene058973.t1 | MTR_1g059590 | 40.588 | 170 | 90 | 4 | 10 | 179 | 426 | 584 | 3.71e-25 | 102 |
MS.gene058973.t1 | MTR_3g078260 | 32.934 | 167 | 99 | 5 | 15 | 170 | 8 | 172 | 7.20e-25 | 97.4 |
MS.gene058973.t1 | MTR_3g107707 | 28.866 | 194 | 129 | 5 | 3 | 192 | 2 | 190 | 5.24e-24 | 95.5 |
MS.gene058973.t1 | MTR_3g107713 | 28.866 | 194 | 129 | 5 | 3 | 192 | 2 | 190 | 6.08e-24 | 95.1 |
MS.gene058973.t1 | MTR_3g107717 | 28.866 | 194 | 129 | 5 | 3 | 192 | 2 | 190 | 6.27e-24 | 95.1 |
MS.gene058973.t1 | MTR_8g075240 | 32.934 | 167 | 99 | 6 | 15 | 170 | 6 | 170 | 1.81e-23 | 93.2 |
MS.gene058973.t1 | MTR_6g087980 | 31.737 | 167 | 101 | 5 | 15 | 170 | 6 | 170 | 2.43e-23 | 93.2 |
MS.gene058973.t1 | MTR_5g022600 | 32.934 | 167 | 99 | 6 | 15 | 170 | 6 | 170 | 4.80e-23 | 92.4 |
MS.gene058973.t1 | MTR_8g031810 | 40.952 | 105 | 48 | 1 | 14 | 118 | 5 | 95 | 4.38e-22 | 86.7 |
MS.gene058973.t1 | MTR_3g078260 | 34.483 | 116 | 73 | 3 | 15 | 129 | 8 | 121 | 1.41e-18 | 79.3 |
MS.gene058973.t1 | MTR_4g113620 | 27.778 | 162 | 104 | 4 | 16 | 177 | 14 | 162 | 8.78e-18 | 78.6 |
MS.gene058973.t1 | MTR_1452s0010 | 47.143 | 70 | 37 | 0 | 40 | 109 | 6 | 75 | 1.34e-17 | 75.5 |
MS.gene058973.t1 | MTR_1686s0010 | 40.000 | 70 | 42 | 0 | 40 | 109 | 6 | 75 | 6.79e-14 | 65.5 |
MS.gene058973.t1 | MTR_5g092060 | 26.190 | 168 | 114 | 4 | 10 | 170 | 98 | 262 | 4.60e-13 | 67.0 |
MS.gene058973.t1 | MTR_2g078000 | 50.000 | 46 | 23 | 0 | 76 | 121 | 46 | 91 | 4.37e-12 | 60.8 |
MS.gene058973.t1 | MTR_5g078090 | 30.488 | 164 | 95 | 6 | 16 | 170 | 20 | 173 | 7.40e-12 | 62.0 |
MS.gene058973.t1 | MTR_1g069245 | 39.744 | 78 | 46 | 1 | 44 | 121 | 122 | 198 | 1.25e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene058973.t1 | AT3G53610 | 89.806 | 206 | 21 | 0 | 11 | 216 | 11 | 216 | 1.62e-141 | 394 |
MS.gene058973.t1 | AT3G53610 | 89.806 | 206 | 21 | 0 | 11 | 216 | 11 | 216 | 1.62e-141 | 394 |
MS.gene058973.t1 | AT3G53610 | 89.806 | 206 | 21 | 0 | 11 | 216 | 11 | 216 | 1.62e-141 | 394 |
MS.gene058973.t1 | AT5G59840 | 90.291 | 206 | 20 | 0 | 11 | 216 | 11 | 216 | 1.36e-140 | 392 |
MS.gene058973.t1 | AT3G46060 | 89.320 | 206 | 22 | 0 | 11 | 216 | 11 | 216 | 5.59e-140 | 390 |
MS.gene058973.t1 | AT3G46060 | 89.320 | 206 | 22 | 0 | 11 | 216 | 11 | 216 | 5.59e-140 | 390 |
MS.gene058973.t1 | AT3G46060 | 89.320 | 206 | 22 | 0 | 11 | 216 | 11 | 216 | 5.59e-140 | 390 |
MS.gene058973.t1 | AT5G03520 | 84.579 | 214 | 32 | 1 | 1 | 214 | 1 | 213 | 5.72e-128 | 360 |
MS.gene058973.t1 | AT3G09900 | 84.186 | 215 | 33 | 1 | 1 | 214 | 1 | 215 | 2.10e-127 | 358 |
MS.gene058973.t1 | AT5G03520 | 82.424 | 165 | 28 | 1 | 50 | 214 | 40 | 203 | 3.32e-100 | 289 |
MS.gene058973.t1 | AT1G02130 | 59.330 | 209 | 73 | 4 | 11 | 216 | 4 | 203 | 9.45e-87 | 255 |
MS.gene058973.t1 | AT4G17530 | 58.654 | 208 | 75 | 4 | 11 | 216 | 4 | 202 | 7.09e-83 | 245 |
MS.gene058973.t1 | AT5G47200 | 58.654 | 208 | 75 | 4 | 11 | 216 | 4 | 202 | 1.66e-82 | 244 |
MS.gene058973.t1 | AT3G11730 | 56.190 | 210 | 80 | 4 | 10 | 215 | 3 | 204 | 1.09e-79 | 237 |
MS.gene058973.t1 | AT4G35860 | 47.143 | 210 | 104 | 3 | 12 | 215 | 3 | 211 | 2.06e-63 | 196 |
MS.gene058973.t1 | AT4G17160 | 46.602 | 206 | 105 | 3 | 12 | 215 | 3 | 205 | 1.77e-62 | 193 |
MS.gene058973.t1 | AT4G17170 | 46.190 | 210 | 106 | 4 | 12 | 215 | 3 | 211 | 8.13e-61 | 189 |
MS.gene058973.t1 | AT1G09630 | 43.458 | 214 | 116 | 2 | 7 | 216 | 4 | 216 | 5.02e-60 | 187 |
MS.gene058973.t1 | AT1G07410 | 42.056 | 214 | 117 | 3 | 7 | 216 | 4 | 214 | 9.77e-58 | 182 |
MS.gene058973.t1 | AT3G07410 | 45.411 | 207 | 107 | 3 | 13 | 214 | 10 | 215 | 1.73e-57 | 181 |
MS.gene058973.t1 | AT4G18430 | 43.981 | 216 | 108 | 4 | 7 | 214 | 5 | 215 | 3.54e-57 | 180 |
MS.gene058973.t1 | AT5G59150 | 48.538 | 171 | 87 | 1 | 7 | 177 | 4 | 173 | 7.18e-57 | 179 |
MS.gene058973.t1 | AT1G16920 | 49.708 | 171 | 85 | 1 | 7 | 177 | 5 | 174 | 2.07e-56 | 178 |
MS.gene058973.t1 | AT4G39990 | 44.340 | 212 | 107 | 4 | 13 | 216 | 15 | 223 | 3.81e-56 | 178 |
MS.gene058973.t1 | AT3G46830 | 42.326 | 215 | 118 | 3 | 7 | 216 | 4 | 217 | 3.83e-56 | 177 |
MS.gene058973.t1 | AT3G46830 | 42.326 | 215 | 118 | 3 | 7 | 216 | 4 | 217 | 3.83e-56 | 177 |
MS.gene058973.t1 | AT2G43130 | 42.157 | 204 | 115 | 2 | 13 | 214 | 10 | 212 | 3.25e-55 | 175 |
MS.gene058973.t1 | AT5G60860 | 44.186 | 215 | 113 | 4 | 7 | 216 | 5 | 217 | 8.30e-55 | 174 |
MS.gene058973.t1 | AT5G45750 | 43.192 | 213 | 113 | 4 | 7 | 214 | 5 | 214 | 9.48e-55 | 174 |
MS.gene058973.t1 | AT1G28550 | 44.240 | 217 | 111 | 4 | 7 | 216 | 5 | 218 | 1.85e-54 | 173 |
MS.gene058973.t1 | AT3G15060 | 44.690 | 226 | 106 | 6 | 1 | 216 | 1 | 217 | 1.94e-54 | 173 |
MS.gene058973.t1 | AT1G01200 | 46.893 | 177 | 94 | 0 | 13 | 189 | 26 | 202 | 4.14e-54 | 173 |
MS.gene058973.t1 | AT1G05810 | 42.857 | 210 | 112 | 4 | 13 | 216 | 10 | 217 | 7.27e-54 | 172 |
MS.gene058973.t1 | AT5G47520 | 42.991 | 214 | 108 | 4 | 13 | 216 | 12 | 221 | 8.31e-54 | 172 |
MS.gene058973.t1 | AT4G18800 | 43.602 | 211 | 113 | 3 | 7 | 214 | 5 | 212 | 1.17e-53 | 171 |
MS.gene058973.t1 | AT2G33870 | 42.791 | 215 | 117 | 3 | 7 | 216 | 5 | 218 | 1.17e-53 | 171 |
MS.gene058973.t1 | AT1G05810 | 42.857 | 210 | 112 | 4 | 13 | 216 | 56 | 263 | 1.83e-53 | 172 |
MS.gene058973.t1 | AT5G65270 | 40.845 | 213 | 116 | 4 | 13 | 216 | 15 | 226 | 8.74e-53 | 169 |
MS.gene058973.t1 | AT2G31680 | 42.381 | 210 | 114 | 3 | 13 | 216 | 10 | 218 | 1.39e-52 | 169 |
MS.gene058973.t1 | AT1G06400 | 47.399 | 173 | 90 | 1 | 7 | 179 | 5 | 176 | 2.39e-52 | 168 |
MS.gene058973.t1 | AT5G47960 | 41.232 | 211 | 116 | 3 | 13 | 216 | 13 | 222 | 3.81e-52 | 168 |
MS.gene058973.t1 | AT5G03530 | 45.755 | 212 | 102 | 7 | 8 | 214 | 6 | 209 | 5.47e-52 | 167 |
MS.gene058973.t1 | AT5G03530 | 45.755 | 212 | 102 | 7 | 8 | 214 | 6 | 209 | 5.47e-52 | 167 |
MS.gene058973.t1 | AT1G73640 | 46.114 | 193 | 99 | 2 | 13 | 201 | 11 | 202 | 1.82e-51 | 166 |
MS.gene058973.t1 | AT1G43890 | 50.299 | 167 | 79 | 4 | 6 | 170 | 4 | 168 | 2.96e-51 | 165 |
MS.gene058973.t1 | AT1G43890 | 50.299 | 167 | 79 | 4 | 6 | 170 | 4 | 168 | 2.96e-51 | 165 |
MS.gene058973.t1 | AT1G43890 | 50.299 | 167 | 79 | 4 | 6 | 170 | 4 | 168 | 2.96e-51 | 165 |
MS.gene058973.t1 | AT1G18200 | 49.123 | 171 | 86 | 1 | 13 | 183 | 11 | 180 | 1.15e-50 | 164 |
MS.gene058973.t1 | AT3G12160 | 41.148 | 209 | 116 | 3 | 13 | 215 | 13 | 220 | 1.45e-50 | 164 |
MS.gene058973.t1 | AT3G54840 | 44.382 | 178 | 94 | 3 | 3 | 179 | 24 | 197 | 6.06e-48 | 156 |
MS.gene058973.t1 | AT3G54840 | 46.154 | 169 | 86 | 3 | 3 | 170 | 24 | 188 | 1.78e-47 | 155 |
MS.gene058973.t1 | AT3G54840 | 45.399 | 163 | 87 | 2 | 18 | 179 | 2 | 163 | 8.74e-47 | 152 |
MS.gene058973.t1 | AT3G09910 | 45.946 | 185 | 96 | 4 | 8 | 190 | 6 | 188 | 3.17e-44 | 147 |
MS.gene058973.t1 | AT3G09910 | 45.946 | 185 | 96 | 4 | 8 | 190 | 6 | 188 | 3.17e-44 | 147 |
MS.gene058973.t1 | AT4G19640 | 38.693 | 199 | 112 | 4 | 17 | 215 | 12 | 200 | 4.60e-44 | 146 |
MS.gene058973.t1 | AT4G35860 | 44.848 | 165 | 84 | 3 | 57 | 215 | 2 | 165 | 1.23e-43 | 144 |
MS.gene058973.t1 | AT3G09910 | 47.701 | 174 | 87 | 4 | 8 | 179 | 6 | 177 | 4.99e-43 | 144 |
MS.gene058973.t1 | AT3G09910 | 47.701 | 174 | 87 | 4 | 8 | 179 | 6 | 177 | 4.99e-43 | 144 |
MS.gene058973.t1 | AT3G09910 | 47.701 | 174 | 87 | 4 | 8 | 179 | 6 | 177 | 4.99e-43 | 144 |
MS.gene058973.t1 | AT5G45130 | 36.181 | 199 | 117 | 4 | 17 | 215 | 12 | 200 | 2.03e-41 | 139 |
MS.gene058973.t1 | AT3G18820 | 38.140 | 215 | 117 | 6 | 5 | 213 | 2 | 206 | 2.57e-41 | 139 |
MS.gene058973.t1 | AT4G39890 | 43.396 | 159 | 88 | 2 | 17 | 174 | 11 | 168 | 1.43e-40 | 138 |
MS.gene058973.t1 | AT2G22290 | 37.879 | 198 | 120 | 2 | 17 | 214 | 11 | 205 | 2.04e-40 | 137 |
MS.gene058973.t1 | AT5G45130 | 35.533 | 197 | 117 | 4 | 19 | 215 | 22 | 208 | 1.10e-39 | 135 |
MS.gene058973.t1 | AT5G10260 | 37.688 | 199 | 121 | 3 | 17 | 215 | 11 | 206 | 1.10e-38 | 133 |
MS.gene058973.t1 | AT1G52280 | 38.537 | 205 | 114 | 5 | 15 | 213 | 8 | 206 | 1.35e-38 | 132 |
MS.gene058973.t1 | AT4G09720 | 38.974 | 195 | 111 | 3 | 15 | 201 | 8 | 202 | 2.86e-38 | 132 |
MS.gene058973.t1 | AT1G49300 | 35.814 | 215 | 122 | 6 | 5 | 213 | 2 | 206 | 4.45e-38 | 131 |
MS.gene058973.t1 | AT1G49300 | 35.814 | 215 | 122 | 6 | 5 | 213 | 2 | 206 | 4.45e-38 | 131 |
MS.gene058973.t1 | AT2G44610 | 35.714 | 210 | 129 | 3 | 5 | 214 | 3 | 206 | 6.71e-38 | 131 |
MS.gene058973.t1 | AT1G22740 | 38.579 | 197 | 113 | 4 | 15 | 205 | 8 | 202 | 7.34e-38 | 130 |
MS.gene058973.t1 | AT5G64990 | 37.563 | 197 | 122 | 1 | 17 | 213 | 9 | 204 | 1.54e-37 | 130 |
MS.gene058973.t1 | AT3G16100 | 37.864 | 206 | 112 | 5 | 15 | 213 | 8 | 204 | 2.06e-37 | 129 |
MS.gene058973.t1 | AT5G59150 | 47.934 | 121 | 62 | 1 | 57 | 177 | 3 | 122 | 2.49e-37 | 128 |
MS.gene058973.t1 | AT2G21880 | 37.019 | 208 | 109 | 4 | 15 | 205 | 9 | 211 | 5.91e-37 | 129 |
MS.gene058973.t1 | AT4G09720 | 38.500 | 200 | 110 | 4 | 15 | 201 | 8 | 207 | 2.28e-36 | 127 |
MS.gene058973.t1 | AT4G09720 | 35.922 | 206 | 113 | 3 | 15 | 201 | 8 | 213 | 4.66e-35 | 124 |
MS.gene058973.t1 | AT5G64990 | 36.275 | 204 | 122 | 2 | 17 | 213 | 9 | 211 | 1.07e-34 | 122 |
MS.gene058973.t1 | AT5G39620 | 37.870 | 169 | 93 | 3 | 16 | 175 | 6 | 171 | 2.48e-33 | 119 |
MS.gene058973.t1 | AT4G19640 | 39.669 | 121 | 73 | 0 | 17 | 137 | 12 | 132 | 2.34e-30 | 109 |
MS.gene058973.t1 | AT4G19640 | 39.669 | 121 | 73 | 0 | 17 | 137 | 12 | 132 | 1.28e-29 | 109 |
MS.gene058973.t1 | AT4G09720 | 39.157 | 166 | 93 | 3 | 44 | 201 | 3 | 168 | 3.68e-29 | 107 |
MS.gene058973.t1 | AT4G09720 | 39.157 | 166 | 93 | 3 | 44 | 201 | 3 | 168 | 3.68e-29 | 107 |
MS.gene058973.t1 | AT4G09720 | 39.157 | 166 | 93 | 3 | 44 | 201 | 3 | 168 | 3.68e-29 | 107 |
MS.gene058973.t1 | AT2G21880 | 36.612 | 183 | 94 | 4 | 40 | 205 | 9 | 186 | 6.06e-29 | 107 |
MS.gene058973.t1 | AT2G21880 | 36.612 | 183 | 94 | 4 | 40 | 205 | 9 | 186 | 6.06e-29 | 107 |
MS.gene058973.t1 | AT4G35020 | 36.527 | 167 | 93 | 6 | 15 | 170 | 6 | 170 | 3.22e-27 | 103 |
MS.gene058973.t1 | AT4G35020 | 36.527 | 167 | 93 | 6 | 15 | 170 | 6 | 170 | 3.22e-27 | 103 |
MS.gene058973.t1 | AT4G35020 | 36.527 | 167 | 93 | 6 | 15 | 170 | 6 | 170 | 3.22e-27 | 103 |
MS.gene058973.t1 | AT2G21880 | 33.173 | 208 | 109 | 5 | 15 | 205 | 9 | 203 | 4.14e-27 | 103 |
MS.gene058973.t1 | AT2G44690 | 33.533 | 167 | 98 | 5 | 15 | 170 | 18 | 182 | 2.25e-26 | 101 |
MS.gene058973.t1 | AT3G48040 | 33.533 | 167 | 98 | 5 | 15 | 170 | 8 | 172 | 5.24e-26 | 100 |
MS.gene058973.t1 | AT5G62880 | 32.402 | 179 | 108 | 5 | 15 | 182 | 8 | 184 | 1.47e-25 | 99.4 |
MS.gene058973.t1 | AT5G45970 | 31.737 | 167 | 101 | 5 | 15 | 170 | 6 | 170 | 1.85e-25 | 98.6 |
MS.gene058973.t1 | AT3G51300 | 32.934 | 167 | 99 | 6 | 15 | 170 | 6 | 170 | 5.88e-25 | 97.4 |
MS.gene058973.t1 | AT1G20090 | 34.731 | 167 | 96 | 6 | 15 | 170 | 5 | 169 | 6.04e-25 | 97.1 |
MS.gene058973.t1 | AT1G75840 | 34.132 | 167 | 97 | 6 | 15 | 170 | 6 | 170 | 8.50e-25 | 97.1 |
MS.gene058973.t1 | AT5G55190 | 28.972 | 214 | 140 | 6 | 3 | 209 | 2 | 210 | 1.41e-24 | 97.1 |
MS.gene058973.t1 | AT5G55080 | 32.099 | 162 | 106 | 3 | 16 | 177 | 14 | 171 | 1.89e-24 | 96.7 |
MS.gene058973.t1 | AT2G17800 | 33.533 | 167 | 98 | 6 | 15 | 170 | 6 | 170 | 2.85e-24 | 95.5 |
MS.gene058973.t1 | AT2G17800 | 33.533 | 167 | 98 | 6 | 15 | 170 | 6 | 170 | 2.85e-24 | 95.5 |
MS.gene058973.t1 | AT5G20010 | 28.037 | 214 | 144 | 6 | 3 | 212 | 2 | 209 | 3.17e-24 | 95.9 |
MS.gene058973.t1 | AT4G28950 | 32.121 | 165 | 101 | 5 | 15 | 170 | 6 | 168 | 7.08e-24 | 94.7 |
MS.gene058973.t1 | AT5G20020 | 28.866 | 194 | 129 | 5 | 3 | 192 | 2 | 190 | 1.06e-23 | 94.7 |
MS.gene058973.t1 | AT3G48040 | 32.704 | 159 | 94 | 5 | 15 | 162 | 8 | 164 | 2.30e-23 | 92.8 |
MS.gene058973.t1 | AT4G35950 | 32.934 | 167 | 99 | 6 | 15 | 170 | 6 | 170 | 2.50e-23 | 93.2 |
MS.gene058973.t1 | AT5G62880 | 32.704 | 159 | 94 | 5 | 15 | 162 | 8 | 164 | 2.51e-22 | 90.1 |
MS.gene058973.t1 | AT4G35020 | 37.069 | 116 | 70 | 3 | 15 | 129 | 6 | 119 | 3.02e-19 | 80.9 |
MS.gene058973.t1 | AT4G35020 | 37.069 | 116 | 70 | 3 | 15 | 129 | 6 | 119 | 3.02e-19 | 80.9 |
MS.gene058973.t1 | AT5G46025 | 34.314 | 102 | 65 | 2 | 77 | 177 | 6 | 106 | 2.79e-15 | 69.7 |
MS.gene058973.t1 | AT3G51290 | 31.884 | 138 | 81 | 6 | 44 | 170 | 636 | 771 | 8.87e-14 | 70.1 |
MS.gene058973.t1 | AT5G37680 | 28.049 | 164 | 99 | 5 | 16 | 170 | 20 | 173 | 3.08e-12 | 63.2 |
MS.gene058973.t1 | AT3G49870 | 29.167 | 168 | 112 | 4 | 16 | 180 | 1 | 164 | 1.33e-11 | 61.2 |
MS.gene058973.t1 | AT5G67560 | 31.707 | 164 | 93 | 6 | 16 | 170 | 20 | 173 | 1.35e-11 | 61.6 |
MS.gene058973.t1 | AT2G15310 | 27.338 | 139 | 89 | 6 | 16 | 153 | 18 | 145 | 3.06e-11 | 60.8 |
MS.gene058973.t1 | AT3G49870 | 29.167 | 168 | 112 | 4 | 16 | 180 | 20 | 183 | 4.46e-11 | 60.1 |
Find 48 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCGAATCAAGTTGCAAATA+TGG | 0.255433 | 1.2:-51362786 | MS.gene058973:CDS |
TTAGCATTGATTTCAAAATA+AGG | 0.283837 | 1.2:-51362828 | MS.gene058973:intron |
GTTGGTTAATCTTGAGTGTC+TGG | 0.301047 | 1.2:+51357939 | None:intergenic |
TAATCGGATCGAGCTCTTGC+AGG | 0.360612 | 1.2:+51365076 | None:intergenic |
TCGCTTACCATCAAGCTCTA+TGG | 0.377596 | 1.2:+51362804 | None:intergenic |
TTGGTTAATCTTGAGTGTCT+GGG | 0.416091 | 1.2:+51357940 | None:intergenic |
CGGTTTCGAACCATTACAAC+TGG | 0.420732 | 1.2:-51362745 | MS.gene058973:intron |
CTTGATTAGGTAATCGTAAT+CGG | 0.424837 | 1.2:+51365060 | None:intergenic |
CATCTGAGAAACGTAATAGA+AGG | 0.443048 | 1.2:+51362988 | None:intergenic |
CTTCTATTACGTTTCTCAGA+TGG | 0.443228 | 1.2:-51362987 | MS.gene058973:CDS |
CGATGAGGAGAAGCTTGATT+AGG | 0.449067 | 1.2:+51365047 | None:intergenic |
CCGACATGGATGAAAGCAAA+AGG | 0.450345 | 1.2:-51358544 | MS.gene058973:CDS |
GCAGAGCCAACTCCCTGGTC+TGG | 0.454797 | 1.2:+51357917 | None:intergenic |
AACTTCAAAGGGTCAAGCTC+TGG | 0.455648 | 1.2:-51358408 | MS.gene058973:CDS |
GCGAATCAAGTTGCAAATAT+GGG | 0.458264 | 1.2:-51362785 | MS.gene058973:CDS |
GCTTATTACCGTGGAGCAAT+GGG | 0.460469 | 1.2:-51358917 | MS.gene058973:CDS |
CAATGTCAACAAAATATTAG+TGG | 0.483464 | 1.2:-51358576 | MS.gene058973:CDS |
ATAAGGACCATAGAGCTTGA+TGG | 0.484066 | 1.2:-51362811 | MS.gene058973:CDS |
AATGTCAACAAAATATTAGT+GGG | 0.485156 | 1.2:-51358575 | MS.gene058973:CDS |
AGAGCTTGACCCTTTGAAGT+TGG | 0.487525 | 1.2:+51358410 | None:intergenic |
AGCTTATTACCGTGGAGCAA+TGG | 0.491934 | 1.2:-51358918 | MS.gene058973:CDS |
TTAGGCTGTTCCAACTTCAA+AGG | 0.500392 | 1.2:-51358420 | MS.gene058973:intron |
CTGAAACTAACCAGTTGTAA+TGG | 0.502216 | 1.2:+51362735 | None:intergenic |
TAGGCTGTTCCAACTTCAAA+GGG | 0.502333 | 1.2:-51358419 | MS.gene058973:CDS |
AGCCAACTCCCTGGTCTGGT+TGG | 0.504165 | 1.2:+51357921 | None:intergenic |
CAAGATTAACCAACCAGACC+AGG | 0.511143 | 1.2:-51357930 | MS.gene058973:CDS |
CAAGCTCTGGCAGATGAATA+CGG | 0.517609 | 1.2:-51358395 | MS.gene058973:CDS |
CAAAATATTAGTGGGGAACA+AGG | 0.518907 | 1.2:-51358567 | MS.gene058973:CDS |
CGACATGGATGAAAGCAAAA+GGG | 0.563915 | 1.2:-51358543 | MS.gene058973:intron |
CTAATCAAGCTTCTCCTCAT+CGG | 0.565419 | 1.2:-51365046 | MS.gene058973:CDS |
CTTGAGCAGAGCCAACTCCC+TGG | 0.575603 | 1.2:+51357912 | None:intergenic |
AACCAACCAGACCAGGGAGT+TGG | 0.575720 | 1.2:-51357923 | MS.gene058973:CDS |
TTGCAAATATGGGACACGGC+TGG | 0.578666 | 1.2:-51362775 | MS.gene058973:CDS |
AACTAATATGAATGTAGATG+AGG | 0.592652 | 1.2:-51358263 | MS.gene058973:CDS |
TCACAAACGTCTTCTTGCTG+TGG | 0.593063 | 1.2:-51357887 | MS.gene058973:CDS |
TGGTTAATCTTGAGTGTCTG+GGG | 0.601058 | 1.2:+51357941 | None:intergenic |
CTTCTCCTCATCGGTGATAG+CGG | 0.601359 | 1.2:-51365037 | MS.gene058973:intron |
AGTGGGGAACAAGGCCGACA+TGG | 0.603133 | 1.2:-51358558 | MS.gene058973:CDS |
CAAGTTGCAAATATGGGACA+CGG | 0.605581 | 1.2:-51362779 | MS.gene058973:CDS |
TATTGGGCAGCTTATTACCG+TGG | 0.608798 | 1.2:-51358926 | MS.gene058973:intron |
TCGGATCGAGCTCTTGCAGG+TGG | 0.611640 | 1.2:+51365079 | None:intergenic |
GCAAAATACCCATTGCTCCA+CGG | 0.620774 | 1.2:+51358909 | None:intergenic |
ACTGTTAAAAGATGACTCAT+CGG | 0.623062 | 1.2:+51358871 | None:intergenic |
GGGACACGGCTGGTCAAGAG+CGG | 0.673808 | 1.2:-51362765 | MS.gene058973:CDS |
AAGATTAACCAACCAGACCA+GGG | 0.675765 | 1.2:-51357929 | MS.gene058973:CDS |
ATGTCAACAAAATATTAGTG+GGG | 0.680013 | 1.2:-51358574 | MS.gene058973:CDS |
AGAAAGCGACTCAAAGACTG+AGG | 0.689584 | 1.2:-51358200 | MS.gene058973:intron |
ACGAACCGCTATCACCGATG+AGG | 0.719307 | 1.2:+51365032 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 51357880 | 51365110 | 51357880 | ID=MS.gene058973 |
chr1.2 | mRNA | 51357880 | 51365110 | 51357880 | ID=MS.gene058973.t1;Parent=MS.gene058973 |
chr1.2 | exon | 51365038 | 51365110 | 51365038 | ID=MS.gene058973.t1.exon1;Parent=MS.gene058973.t1 |
chr1.2 | CDS | 51365038 | 51365110 | 51365038 | ID=cds.MS.gene058973.t1;Parent=MS.gene058973.t1 |
chr1.2 | exon | 51362954 | 51363026 | 51362954 | ID=MS.gene058973.t1.exon2;Parent=MS.gene058973.t1 |
chr1.2 | CDS | 51362954 | 51363026 | 51362954 | ID=cds.MS.gene058973.t1;Parent=MS.gene058973.t1 |
chr1.2 | exon | 51362746 | 51362846 | 51362746 | ID=MS.gene058973.t1.exon3;Parent=MS.gene058973.t1 |
chr1.2 | CDS | 51362746 | 51362846 | 51362746 | ID=cds.MS.gene058973.t1;Parent=MS.gene058973.t1 |
chr1.2 | exon | 51358873 | 51358938 | 51358873 | ID=MS.gene058973.t1.exon4;Parent=MS.gene058973.t1 |
chr1.2 | CDS | 51358873 | 51358938 | 51358873 | ID=cds.MS.gene058973.t1;Parent=MS.gene058973.t1 |
chr1.2 | exon | 51358544 | 51358641 | 51358544 | ID=MS.gene058973.t1.exon5;Parent=MS.gene058973.t1 |
chr1.2 | CDS | 51358544 | 51358641 | 51358544 | ID=cds.MS.gene058973.t1;Parent=MS.gene058973.t1 |
chr1.2 | exon | 51358376 | 51358438 | 51358376 | ID=MS.gene058973.t1.exon6;Parent=MS.gene058973.t1 |
chr1.2 | CDS | 51358376 | 51358438 | 51358376 | ID=cds.MS.gene058973.t1;Parent=MS.gene058973.t1 |
chr1.2 | exon | 51358201 | 51358293 | 51358201 | ID=MS.gene058973.t1.exon7;Parent=MS.gene058973.t1 |
chr1.2 | CDS | 51358201 | 51358293 | 51358201 | ID=cds.MS.gene058973.t1;Parent=MS.gene058973.t1 |
chr1.2 | exon | 51357880 | 51357963 | 51357880 | ID=MS.gene058973.t1.exon8;Parent=MS.gene058973.t1 |
chr1.2 | CDS | 51357880 | 51357963 | 51357880 | ID=cds.MS.gene058973.t1;Parent=MS.gene058973.t1 |
Gene Sequence |
Protein sequence |